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19 pages, 4365 KiB  
Article
Fecal Virome Transplantation Confirms Non-Bacterial Components (Virome and Metabolites) Participate in Fecal Microbiota Transplantation-Mediated Growth Performance Enhancement and Intestinal Development in Broilers with Spatial Heterogeneity
by Shuaihu Chen, Tingting Liu, Junyao Chen, Hong Shen and Jungang Wang
Microorganisms 2025, 13(8), 1795; https://doi.org/10.3390/microorganisms13081795 - 31 Jul 2025
Viewed by 305
Abstract
Fecal microbiota transplantation (FMT) promotes growth performance and intestinal development in yellow-feathered broilers, but whether the virome and metabolites contribute to its growth-promoting effect remains unclear. This study removed the microbiota from FMT filtrate using a 0.45 μm filter membrane, retaining the virome [...] Read more.
Fecal microbiota transplantation (FMT) promotes growth performance and intestinal development in yellow-feathered broilers, but whether the virome and metabolites contribute to its growth-promoting effect remains unclear. This study removed the microbiota from FMT filtrate using a 0.45 μm filter membrane, retaining the virome and metabolites to perform fecal virome transplantation (FVT), aiming to investigate its regulatory role in broiler growth. Healthy yellow-feathered broilers with high body weights (top 10% of the population) were used as FVT donors. Ninety-six 8-day-old healthy male yellow-feathered broilers (95.67 ± 3.31 g) served as FVT recipients. Recipient chickens were randomly assigned to a control group and an FVT group. The control group was gavaged with 0.5 mL of normal saline daily, while the FVT group was gavaged with 0.5 mL of FVT solution daily. Growth performance, immune and antioxidant capacity, intestinal development and related gene expression, and microbial diversity were measured. The results showed that FVT improved the feed utilization rate of broilers (the feed conversion ratio decreased by 3%; p < 0.05), significantly increased jejunal length (21%), villus height (69%), and crypt depth (84%) (p < 0.05), and regulated the jejunal barrier: insulin-like growth factor-1 (IGF-1) (2.5 times) and Mucin 2 (MUC2) (63 times) were significantly upregulated (p < 0.05). FVT increased the abundance of beneficial bacteria Lactobacillales. However, negative effects were also observed: Immunoglobulin A (IgA), Immunoglobulin G (IgG), Immunoglobulin M (IgM), Interleukin-1 beta (IL-1β), Interleukin-6 (IL-6), Tumor Necrosis Factor-alpha (TNF-α), and Interferon-gamma (IFN-γ) in broilers were significantly upregulated (p < 0.05), indicating immune system overactivation. Duodenal barrier-related genes Mucin 2 (MUC2), Occludin (OCLN), Claudin (CLDN1), and metabolism-related genes solute carrier family 5 member 1 (SLC5A1) and solute carrier family 7 member 9 (SLC7A9) were significantly downregulated (p < 0.05). The results of this trial demonstrate that, besides the microbiota, the gut virome and metabolites are also functional components contributing to the growth-promoting effect of FMT. The differential responses in the duodenum and jejunum reveal spatial heterogeneity and dual effects of FVT on the intestine. The negative effects limit the application of FMT/FVT. Identifying the primary functional components of FMT/FVT to develop safe and targeted microbial preparations is one potential solution. Full article
(This article belongs to the Section Veterinary Microbiology)
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24 pages, 6281 KiB  
Article
Bioactive Polysaccharides Prevent Lipopolysaccharide-Induced Intestinal Inflammation via Immunomodulation, Antioxidant Activity, and Microbiota Regulation
by Mingyang Gao, Wanqing Zhang, Yan Ma, Tingting Liu, Sijia Wang, Shuaihu Chen, Zhengli Wang and Hong Shen
Foods 2025, 14(15), 2575; https://doi.org/10.3390/foods14152575 - 23 Jul 2025
Viewed by 387
Abstract
Intestinal inflammation involves barrier impairment, immune hyperactivation, and oxidative stress imbalance. Bioactive polysaccharides universally alleviate inflammation via anti-inflammatory, antioxidant, and microbiota-modulating effects, yet exhibit distinct core mechanisms. Elucidating these differences is vital for targeted polysaccharide applications. This research examines distinct regulatory pathways through [...] Read more.
Intestinal inflammation involves barrier impairment, immune hyperactivation, and oxidative stress imbalance. Bioactive polysaccharides universally alleviate inflammation via anti-inflammatory, antioxidant, and microbiota-modulating effects, yet exhibit distinct core mechanisms. Elucidating these differences is vital for targeted polysaccharide applications. This research examines distinct regulatory pathways through which diverse bioactive polysaccharides mitigate lipopolysaccharide-triggered intestinal inflammation in male Kunming (KM) mice. This experiment employed Lentinula edodes polysaccharide (LNT), Auricularia auricula polysaccharide (AAP), Cordyceps militaris polysaccharide (CMP), Lycium barbarum polysaccharide (LBP), and Brassica rapa polysaccharide (BRP). The expression levels of biomarkers associated with the TLR4 signaling pathway, oxidative stress, and intestinal barrier function were quantified, along with comprehensive gut microbiota profiling. The results showed that all five polysaccharides alleviated inflammatory responses in mice by inhibiting inflammatory cytokine release, reducing oxidative damage, and modulating gut microbiota, but their modes of action differed: LBP significantly suppressed the TLR-4/MyD88 signaling pathway and its downstream pro-inflammatory cytokine expression, thereby blocking inflammatory signal transduction and reducing oxidative damage; LNT and CMP enhanced the body’s antioxidant capacity by increasing antioxidant enzyme activities and decreasing malondialdehyde (MDA) levels; AAP and BRP enriched Akkermansia (Akk.) within the Verrucomicrobia (Ver.) phylum, upregulating tight junction protein expression to strengthen the intestinal mucosal barrier and indirectly reduce oxidative damage. This research demonstrates that different polysaccharides alleviate inflammation through multi-target synergistic mechanisms: LBP primarily inhibits inflammatory pathways; AAP and BRP focus on intestinal barrier protection and microbiota modulation; and LNT and CMP exert effects via antioxidant enzyme activation. These data support designing polysaccharide blends that leverage complementary inflammatory modulation mechanisms. Full article
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21 pages, 492 KiB  
Review
Research Progress on Varicella-Zoster Virus Vaccines
by Hongjing Liu, Lingyan Cui, Sibo Zhang, Hong Wang, Wenhui Xue, Hai Li, Yuyun Zhang, Lin Chen, Ying Gu, Tingting Li, Ningshao Xia and Shaowei Li
Vaccines 2025, 13(7), 730; https://doi.org/10.3390/vaccines13070730 - 4 Jul 2025
Viewed by 1205
Abstract
Varicella-zoster virus (VZV) poses significant public health challenges as the etiological agent of varicella (chickenpox) and herpes zoster (HZ), given its high transmissibility and potential for severe complications. The introduction of VZV vaccines—particularly the vOka-based live attenuated and glycoprotein gE-based recombinant subunit vaccines—has [...] Read more.
Varicella-zoster virus (VZV) poses significant public health challenges as the etiological agent of varicella (chickenpox) and herpes zoster (HZ), given its high transmissibility and potential for severe complications. The introduction of VZV vaccines—particularly the vOka-based live attenuated and glycoprotein gE-based recombinant subunit vaccines—has substantially reduced the global incidence of these diseases. However, live attenuated vaccines raise concerns regarding safety and immunogenicity, especially in immunocompromised populations, while recombinant subunit vaccines, such as Shingrix, exhibit high efficacy but are associated with side effects and adjuvant limitations. Recent advancements in vaccine technology, including mRNA vaccines, viral vector vaccines, and virus-like particle (VLP) vaccines, offer promising alternatives with improved safety profiles and durable immunity. This review synthesizes current knowledge on VZV vaccine mechanisms, clinical applications, and immunization strategies, while also examining future directions in vaccine development. The findings underscore the pivotal role of VZV vaccines in disease prevention and highlight the need for continued research to enhance their public health impact. Full article
(This article belongs to the Special Issue Varicella and Zoster Vaccination)
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12 pages, 1224 KiB  
Article
Effect of Planting Portulaca oleracea L. on Improvement of Salt-Affected Soils
by Jing Dong, Jincheng Xing, Tingting He, Sunan He, Chong Liu, Xiaomei Zhu, Guoli Sun, Kai Wang, Lizhou Hong and Zhenhua Zhang
Appl. Sci. 2025, 15(13), 7310; https://doi.org/10.3390/app15137310 - 28 Jun 2025
Viewed by 331
Abstract
Saline–alkali land is a critical factor limiting agricultural production and ecological restoration. Utilizing salt-tolerant plants for bioremediation represents an environmentally friendly and sustainable approach to soil management. This study employed the highly salt-tolerant crop Portulaca oleracea L. cv. “Su Ma Chi Xian 3” [...] Read more.
Saline–alkali land is a critical factor limiting agricultural production and ecological restoration. Utilizing salt-tolerant plants for bioremediation represents an environmentally friendly and sustainable approach to soil management. This study employed the highly salt-tolerant crop Portulaca oleracea L. cv. “Su Ma Chi Xian 3” as the test material. A plot experiment was established in coastal saline soils with planting P. a- oleracea (P) and no planting (CK) under three blocks with the different salt levels (S1: 2.16 g/kg; S2: 4.08 g/kg; S3: 5.43 g/kg) to systematically evaluate its salt accumulation capacity and effects on soil physicochemical properties. The results demonstrated that P. oleracea exhibited adaptability across all three salinity levels, with aboveground biomass following the trend PS2 > PS3 > PS1. The ash salt contents removed through harvesting were 1.29, 2.03, and 1.74 t/ha, respectively, in PS1, PS2, and PS3. Compared to no planting, a significant reduction in bulk density was observed in the 0–10 and 10–20 cm soil layers (p < 0.05). A significant increase in porosity by 9.72%, 16.29%, and 12.61% was found under PS1, PS2, and PS3, respectively, in the 0–10 cm soil layer. Soil salinity decreased by 34.20%, 50.23%, and 48.26%, in the 0–10 cm soil layer and by 14.43%, 32.30%, and 26.42% in the 10–20 cm soil layer under PS1, PS2, and PS3, respectively. The pH exhibited a significant reduction under the planting treatment in the 0–10 cm layer. A significant increase in organic matter content by 13.70%, 12.44%, and 13.55%, under PS1, PS2, and PS3, respectively, was observed in the 0–10 cm soil layer. The activities of invertase and urease were significantly enhanced in the 0–10 and 10–20 cm soil layers, and the activity of alkaline phosphatase also exhibited a significant increase in the 0–10 cm layer under the planting treatment. This study indicated that cultivating P. oleracea could effectively facilitate the improvement of coastal saline soils by optimizing soil structure, reducing salinity, increasing organic matter, and activating the soil enzyme system, thereby providing theoretical and technical foundations for ecological restoration and sustainable agricultural utilization of saline–alkali lands. Full article
(This article belongs to the Special Issue Plant Management and Soil Improvement in Specialty Crop Production)
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17 pages, 1804 KiB  
Article
Difenoconazole-Loaded Nanostructured Lipid Carriers: Preparation, Characterization, and Evaluation
by Yinghong Li, Hu Zhang, Tingting Meng, Yuqin Zhou, Beilei Zhou, Shihan Du, Hong Yuan and Fuqiang Hu
Pharmaceuticals 2025, 18(6), 780; https://doi.org/10.3390/ph18060780 - 23 May 2025
Cited by 1 | Viewed by 570
Abstract
Background/Objectives: Difenoconazole (DFC) is a broad-spectrum fungicide. However, its application is limited due to poor aqueous solubility. Drugs with low solubility can be better absorbed using nanostructured lipid carriers (NLCs). Hence, the application of DFC in an NLC delivery system is proposed. [...] Read more.
Background/Objectives: Difenoconazole (DFC) is a broad-spectrum fungicide. However, its application is limited due to poor aqueous solubility. Drugs with low solubility can be better absorbed using nanostructured lipid carriers (NLCs). Hence, the application of DFC in an NLC delivery system is proposed. Methods: Difenoconazole-loaded nanostructured lipid carriers (DFC-NLCs) with different solid–liquid lipid ratios were prepared by solvent diffusion method. Key physicochemical parameters, including particle diameter, surface charge (zeta potential), drug encapsulation efficiency, and morphological characteristics, were systematically characterized. Using Rhizoctonia solani (R. solani) as the model strain, inhibitory efficiency of DFC-NLC dispersion was compared with that of commercial dosage forms, such as 25% DFC emulsifiable concentrate (DFC-EC) and 40% DFC suspension concentrate (DFC-SC). Additionally, uptakes of DFC-NLC dispersions in R. solani were further observed by fluorescence probe technology. The safety profiles of DFC-NLCs and commercial dosage forms were evaluated using zebrafish as the model organism. Acute toxicity studies were conducted to determine the maximum non-lethal concentration (MNLC) and 10% lethal concentration (LC10). Developmental toxicity studies were performed to observe toxic phenotypes. Results: DFC-NLC dispersions were in the nanometer range (≈200 nm) with high zeta potential, spherical in shape with encapsulation efficiency 69.1 ± 1.8%~95.0 ± 2.6%, and drug loading 7.1 ± 0.3%~9.7 ± 0.6% determined by high-performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS). Compared with commercial dosage forms, the antifungal effect of the DFC-NLC on R. solani was significantly improved in in vitro antibacterial experiments (p < 0.05). The 50% effective concentration (EC50) values were 0.107 mg·L−1 (DFC-NLC), 0.211 mg·L−1 (DFC-EC), and 0.321 mg·L−1 (DFC-SC), respectively. The uptakes of FITC-labeled DFC-NLC demonstrated that an NLC was appropriate to deliver DFC into pathogen to enhance the target effect. In safety assessment studies, DFC-NLCs exhibited a superior safety profile compared with commercial formulations (p < 0.05). Conclusions: This study investigates the feasibility of NLCs as delivery systems for poorly water-soluble fungicides, demonstrating their ability to enhance antifungal efficacy and reduce environmental risks. Full article
(This article belongs to the Section Pharmaceutical Technology)
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25 pages, 34970 KiB  
Article
Spatial Impact Dynamics of the “Mountain–City–Sea” Pattern on the Urban Thermal Environment and Adaptive Zoning Regulation
by Lingyi Ouyang, Hao Guo, Xiujin Song and Tingting Hong
Sustainability 2025, 17(10), 4459; https://doi.org/10.3390/su17104459 - 14 May 2025
Viewed by 467
Abstract
Optimizing urban patterns is increasingly recognized as an effective technological strategy to mitigate the urban heat island (UHI) effect. Taking Xiamen City as a case study, this research extracts and quantifies city spatial characteristics from multiple data sources. Key factors influencing the urban [...] Read more.
Optimizing urban patterns is increasingly recognized as an effective technological strategy to mitigate the urban heat island (UHI) effect. Taking Xiamen City as a case study, this research extracts and quantifies city spatial characteristics from multiple data sources. Key factors influencing the urban thermal environment were integrated into three primary urban pattern elements: Mountain, City, and Sea. The spatial autocorrelation and heterogeneous impacts of these urban pattern elements on the thermal environment were analyzed using Moran’s I and Geographically Weighted Regression (GWR) modeling, followed by impact-based zoning using K-means clustering algorithms. The results revealed a significant positive correlation between Mountain and City elements and the thermal environment, whereas Sea elements exhibited a notable cooling effect. Furthermore, each factor demonstrated significant spatial heterogeneity. Based on local GWR regression coefficients and spatial variations in factor intensity and directionality, Xiamen was partitioned into four distinct regulatory zones: City-dominated zones, Sea-dominated zones, Mountain–Sea co-dominated zones, and Comprehensive transitional zones influenced by Mountain–City–Sea interactions. Customized, spatially targeted regulatory strategies were subsequently proposed for each zone. This study provides an innovative methodological framework for targeted, region-specific policy interventions to alleviate urban thermal stress under climate change, thereby contributing to the optimization of future urban planning and promoting sustainable and adaptive development. Full article
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21 pages, 11170 KiB  
Article
Energy Carbon Emission Reduction Based on Spatiotemporal Heterogeneity: A County-Level Empirical Analysis in Guangdong, Fujian, and Zhejiang
by Yuting Lai, Tingting Fei, Chen Wang, Xiaoying Xu, Xinhan Zhuang, Xiang Que, Yanjiao Zhang, Wenli Yuan, Haohao Yang and Yu Hong
Sustainability 2025, 17(7), 3218; https://doi.org/10.3390/su17073218 - 4 Apr 2025
Viewed by 601
Abstract
Guangdong, Fujian, and Zhejiang (GFZ), located on China’s southeast coast, have long been economically active and rapidly growing provinces in China. However, the rising energy consumption in these provinces poses a major challenge to their carbon emissions reduction. Due to the spatial variation [...] Read more.
Guangdong, Fujian, and Zhejiang (GFZ), located on China’s southeast coast, have long been economically active and rapidly growing provinces in China. However, the rising energy consumption in these provinces poses a major challenge to their carbon emissions reduction. Due to the spatial variation in the natural environment and socio-economic activities, energy carbon emissions (ECEs) and their reduction may vary among counties. The matter of scientifically formulating localized carbon reduction paths has therefore become a critical issue. This study proposed a novel path analysis framework based on exploring spatiotemporal heterogeneity using a spatiotemporal statistic model (i.e., spatiotemporal weighted regression). The path’s learning procedure was based on linking the changes in the amount of ECEs to the shifts in dominant factors, which were detected through local significance tests on the coefficients of STWR. To verify its effectiveness, we conducted a county-level empirical study considering four drivers (i.e., population (P), impervious surfaces (I), the proportion of secondary industry (manufacturing, M), and the proportion of tertiary industry (services, S)) in GFZ from 2014 to 2021. The ECEs show two different trends that may be affected by the COVID-19 pandemic and economic recession; hence, we divided them into two periods: an active period (2014–2018) and a stable period (2018–2021). Many interpretable paths and their occurrences were derived from our results, including the following: (1) P and S showed higher sensitivity to the changes in ECEs compared with I and M. Most counties (more than 50%) were dominated by P, but the dominator P may shift to I, M, and S during the active period. Many S-dominated counties reverted to being P-dominated ones during the stable period. (2) For the active period, the two most significant paths, M+ → S and M+ → P+ (+/− denotes positive or negative impacts of dominated driver), reduced ECEs by about 7.747 × 105 tons and 3.145 × 105 tons, respectively. Meanwhile, the worst path, S+ → P+, increased ECEs by nearly 1.186 × 106 tons. (3) For the stable period, the best path (S+ → I+) significantly reduced ECEs by 1.122 × 106 tons, while the worst two paths, M → P+ and I+ → P+, increased ECEs by 1.978 × 106 tons and 4.107 ×105 tons, respectively. These findings verify the effectiveness of our framework and further highlight the need for tailored, region-specific policies to achieve carbon reduction goals. Full article
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20 pages, 3859 KiB  
Article
Thermal Mitigation in Coastal Cities: Marine and Urban Morphology Effects on Land Surface Temperature in Xiamen
by Tingting Hong, Xiaohui Huang, Qinfei Lv, Suting Zhao, Zeyang Wang and Yuanchuan Yang
Buildings 2025, 15(7), 1170; https://doi.org/10.3390/buildings15071170 - 2 Apr 2025
Cited by 2 | Viewed by 570
Abstract
Amidst the rapid global urbanization and economic integration, coastal cities have undergone significant changes in urban spatial patterns. These changes have further worsened the complex urban thermal environment, making it crucial to study the interaction between human-driven development and natural climate systems. To [...] Read more.
Amidst the rapid global urbanization and economic integration, coastal cities have undergone significant changes in urban spatial patterns. These changes have further worsened the complex urban thermal environment, making it crucial to study the interaction between human-driven development and natural climate systems. To address the insufficient quantification of marine elements in the urban planning of subtropical coastal zones, this study takes Xiamen, a typical deep-water port city, as an example to construct a spatial analysis framework integrating marine boundary layer parameters. This research employs interpolation simulation, atmospheric correction, and other techniques to simulate the inversion of land use and Landsat 8 data, deriving urban morphological elements and Land Surface Temperature (LST) data. These data were then assigned to 500 m grids for analysis. A bivariate spatial auto-correlation model was applied to examine the relationship between urban carbon emission and LST. The study area was categorized based on the influence of marine factors, and the spatial relationships between urban morphological elements and LST were analyzed using a multiscale geographically weighted regression model. Three Xiamen-specific discoveries emerged: (1) the marine exerts a significant thermal mitigation effect on the city, with an average influence range of 7.94 km; (2) the relationship between urban morphology and the thermal environment exhibits notable spatial heterogeneity across different regions; and (3) to mitigate urban thermal environments, connected green corridors should be established in the southern coastal areas of outer districts in regions significantly influenced by the ocean. In areas with less marine influence, spatial complexity should be introduced by disrupting relatively intact blue–green spaces, while regions unaffected by the ocean should focus on increasing green spaces and reducing impervious surfaces and water bodies. These findings directly inform Xiamen’s 2035 Master Plan for combating heat island effects in coastal special economic zones, providing transferable metrics for similar maritime cities. Full article
(This article belongs to the Special Issue Advanced Research on the Urban Heat Island Effect and Climate)
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14 pages, 3475 KiB  
Article
The Correlation Between Crime Frequency and Urban Spatial Hierarchy in Busan
by Yao Lu, Shan Gao, Tingting Hong, Zhe Cao, Heangwoo Lee, Eunkil Cho and Xiaolong Zhao
Buildings 2025, 15(7), 1010; https://doi.org/10.3390/buildings15071010 - 21 Mar 2025
Cited by 1 | Viewed by 1143
Abstract
This study examined the relationship between urban spatial hierarchy and crime rates in Busan using space syntax. This research study investigated the correlation between crime frequency and Busan’s urban space structure. The findings are as follows. Crime concentrated in areas near downtown Busan. [...] Read more.
This study examined the relationship between urban spatial hierarchy and crime rates in Busan using space syntax. This research study investigated the correlation between crime frequency and Busan’s urban space structure. The findings are as follows. Crime concentrated in areas near downtown Busan. High-control and globally integrated areas showed a strong link between city center crimes and spatial usage patterns and pedestrian routes. A weak positive correlation was found between Busan’s urban spatial hierarchy and crime frequency, indicating that urban spatial hierarchy influences crime patterns. However, the regression model’s independent variables had low explanatory power for the dependent variable, suggesting external factors influence crime occurrence beyond urban spatial hierarchy. This study provides an empirical analysis of the relationship between crime incidence and urban spatial structure in Busan, serving as essential data for future crime prevention policies. Full article
(This article belongs to the Special Issue Advances in Urban Planning and Design for Urban Safety and Operations)
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20 pages, 4729 KiB  
Article
Aerospace Mutagenized Tea Tree Increases Rhizospheric Microorganisms, Enhances Nutrient Conversion Capacity and Promotes Growth
by Weiting Cheng, Yulin Wang, Yuhua Wang, Lei Hong, Miaoen Qiu, Yangxin Luo, Qi Zhang, Tingting Wang, Xiaoli Jia, Haibin Wang and Jianghua Ye
Plants 2025, 14(7), 981; https://doi.org/10.3390/plants14070981 - 21 Mar 2025
Cited by 1 | Viewed by 691
Abstract
The utilization of aerospace mutagenesis in plant breeding is a novel, efficient technology. This study investigates the effects of aerospace mutagenesis on tea tree growth, soil nutrient conversion, and soil microbial community structure and function. The results showed that aerospace mutagenized tea trees [...] Read more.
The utilization of aerospace mutagenesis in plant breeding is a novel, efficient technology. This study investigates the effects of aerospace mutagenesis on tea tree growth, soil nutrient conversion, and soil microbial community structure and function. The results showed that aerospace mutagenized tea trees showed increased leaf area, 100-bud weight, and yield. The rhizosphere soil of mutagenized tea tree displayed an increase in microorganisms, enhanced carbon and nitrogen cycling capacity, and significant increases in nutrient conversion and antioxidant enzyme activities. In addition, the content of available nutrients was also increased. Aerospace mutagenesis showed an increase in the abundance of soil-characteristic microorganisms (Solirubrobacterales bacterium, Capillimicrobium parvum, Mycobacterium colombiense, Mycobacterium rhizamassiliense, and Conexibacter woesei), and enhancement of the intensity of metabolic pathways, glyoxylate and dicarboxylate metabolism, biosynthesis of secondary metabolites, microbial metabolism in diverse environments, carbon metabolism, fatty acid metabolism, carbon metabolism, biosynthesis of amino acids, and biosynthesis of cofactors of soil microorganisms. Interaction network and partial least squares structural equation modeling (PLS-SEM) equation analysis showed that after aerospace mutagenesis, soil-characteristic microorganisms positively affected soil microbial functions, soil microbial biomass carbon and nitrogen, respiration intensity, and soil enzyme activities; furthermore, it improved available nutrient content and tea tree growth. This study provides an important reference for the cultivation and management of aerospace mutagenized tea trees and microbial regulation of tea tree growth. Full article
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18 pages, 7448 KiB  
Article
Transcriptomic and Metabolomic Analysis Reveals the Mechanism of H18 Pepper Color Change
by Han Wang, Li Jia, Dongchen Li, Muhammad Aamir Manzoor, Congsheng Yan, Qiangqiang Ding, Yan Wang, Xiujing Hong, Tingting Song and Haikun Jiang
Agriculture 2025, 15(6), 655; https://doi.org/10.3390/agriculture15060655 - 20 Mar 2025
Viewed by 621
Abstract
Pigments in plants not only determine their visual characteristics but also play crucial roles in photosynthesis, pollinator attraction, and disease resistance. The diverse colors of chili peppers arise from various pigments. However, detailed reports on the genetic and metabolic changes of these pigments [...] Read more.
Pigments in plants not only determine their visual characteristics but also play crucial roles in photosynthesis, pollinator attraction, and disease resistance. The diverse colors of chili peppers arise from various pigments. However, detailed reports on the genetic and metabolic changes of these pigments in the developmental stages of colorful chili peppers are limited. In this study, we analyzed the content of anthocyanins and carotenoids in the fruits of the cultivated pepper variety H18 at different growth and development stages. Our findings revealed that, as the fruits mature, the anthocyanin content gradually decreases while the carotenoid content increases. Using the transcriptomic and metabolomic sequencing of pepper fruits at various developmental stages, we identified four types of anthocyanins: pelargonidin, cyanidin, delphinidin, and peonidin, as well as a small amount of proanthocyanidins. The concentrations of these anthocyanins generally showed a decreasing trend, and the expression patterns of anthocyanin biosynthesis genes were consistent with the metabolic data. In the analysis of carotenoids, we found that, apart from Lutein, the concentrations of all other detected carotenoids increased during fruit development. Most carotenoids began to accumulate significantly at the orange fruit stage (H18-O) and peaked at the red fruit stage (H18-R). Transcriptomic and RT-qPCR data indicated that the expression of carotenoid biosynthesis genes also increased progressively. Furthermore, we investigated the degradation of anthocyanins and identified potential degradation genes, including BGLU, POD, and PPO. This study provides deep insights into the mechanisms underlying pigment changes in colorful peppers, which may contribute to the improvement of pepper varieties and future research on pigment regulatory mechanisms. Full article
(This article belongs to the Section Crop Genetics, Genomics and Breeding)
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17 pages, 7346 KiB  
Article
Comprehensive Hydrochemical Analysis, Controlling Mechanisms, and Water Quality Assessment of Surface and Groundwater in a Typical Intensive Agricultural Area, Northern China
by Zongjun Gao, Tingting Huang, Jinkai Chen, Hong Tian, Menghan Tan, Yiru Niu and Kexin Lou
Water 2025, 17(2), 276; https://doi.org/10.3390/w17020276 - 19 Jan 2025
Cited by 3 | Viewed by 1333
Abstract
Groundwater is a significant source of water, and evaluating its hydrochemical attributes, quality, and associated health risks holds paramount importance in guaranteeing safe water access for the population and fostering sustainable socio-economic progress. Situated within a semi-arid region, the Dianbu area (DBA) features [...] Read more.
Groundwater is a significant source of water, and evaluating its hydrochemical attributes, quality, and associated health risks holds paramount importance in guaranteeing safe water access for the population and fostering sustainable socio-economic progress. Situated within a semi-arid region, the Dianbu area (DBA) features numerous greenhouses interspersed amongst open farmlands. An examination revealed a discernible decline in the overall water chemistry environment in this area. This study extensively examined the fundamental water chemistry characteristics of groundwater and surface water samples through a statistical analysis, Piper’s trilinear diagram, ion ratios, and other analytical methods. The assessment of irrigation water quality was conducted using the entropy weight water quality index (EWQI), sodium adsorption ratio (SAR), percentage of soluble sodium (Na%), among other relevant indicators. The findings demonstrate multiple key aspects: 1. Water cations are chiefly composed of Ca2+ and Na+, while groundwater anions are notably NO3 and SO42− dominant, defining the water type as NO3-SO4-Ca. Conversely, surface water primarily displays HCO3 and SO42− anions, aligning it with an HCO3-SO4-Ca water type. 2. The extensive agricultural activities in the region, coupled with the excessive utilization of pesticides, chemical fertilizers, as well as the discharge of domestic sewage, contribute to heightened NO3 concentrations in groundwater. 3. The water quality assessments indicate that approximately 53% of agricultural water quality meets irrigation standards based on EWQI, with SAR results suggesting around 65.52% suitability for irrigation and Na% findings indicating approximately 55.88% viability for this purpose. Proper water selection tailored to specific conditions is advised to mitigate potential soil salinization risks associated with long-term irrational irrigation practices. Full article
(This article belongs to the Topic Human Impact on Groundwater Environment, 2nd Edition)
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15 pages, 4118 KiB  
Article
Antibacterial, Herbicidal, and Plant Growth-Promoting Properties of Streptomyces sp. STD57 from the Rhizosphere of Adenophora stricta
by Dan He, Congting Gao, Shen Zhao, Hongmin Chen, Peng Li, Xishan Yang, Deping Li, Tingting Zhao, Hong Jiang and Chongxi Liu
Microorganisms 2024, 12(11), 2245; https://doi.org/10.3390/microorganisms12112245 - 6 Nov 2024
Cited by 2 | Viewed by 1456
Abstract
Bacterial wilt triggered by the soil-borne pathogenic bacterium Ralstonia solanacearum is one of the most serious diseases in tomato plants, leading to huge economic losses worldwide. Biological control is considered an environmentally friendly and sustainable way to manage soil-borne diseases. In this study, [...] Read more.
Bacterial wilt triggered by the soil-borne pathogenic bacterium Ralstonia solanacearum is one of the most serious diseases in tomato plants, leading to huge economic losses worldwide. Biological control is considered an environmentally friendly and sustainable way to manage soil-borne diseases. In this study, Streptomyces sp. STD57 isolated from the rhizosphere of Adenophora stricta showed strong antibacterial activity against R. solanacearum. Pot experiments showed that strain STD57 exhibited a significant biocontrol effect (81.7%) on tomato bacterial wilt in the greenhouse environment. Furthermore, strain STD57 could inhibit the growth of weeds (Amaranthus retroflexus, Portulaca oleracea, and Echinochloa crusgalli) but promote the growth of crops (wheat, rice, and tomato). The plant growth-promoting substance was identified as indoleacetic acid (IAA) by high-pressure liquid chromatography–mass spectrometry and genome analysis. Coarse separation of the fermented extracts revealed that the antibacterial and herbicidal substances were mainly in the fermentation supernatant and belonged to different products. These findings suggested that strain STD57 may be a potential biocontrol and bioherbicide agent useful in agriculture. Full article
(This article belongs to the Section Microbial Biotechnology)
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25 pages, 7880 KiB  
Article
Antioxidant 1,2,3,4,6-Penta-O-galloyl-β-D-glucose Alleviating Apoptosis and Promoting Bone Formation Is Associated with Estrogen Receptors
by Yongqing Hua, Haili Wang, Tingting Chen, Yeru Zhou, Zhiyuan Chen, Xinyue Zhao, Shaoqin Mo, Hongyun Mao, Miao Li, Linxia Wang and Min Hong
Molecules 2024, 29(21), 5110; https://doi.org/10.3390/molecules29215110 - 29 Oct 2024
Viewed by 1399
Abstract
1,2,3,4,6-penta-O-galloyl-β-D-glucose (PGG) is the main phenolic active ingredient in Paeoniae Radix Alba, which is commonly used for the treatment of osteoporosis (OP). PGG is a potent natural antioxidant, and its effects on OP remain unknown. This study aimed to investigate [...] Read more.
1,2,3,4,6-penta-O-galloyl-β-D-glucose (PGG) is the main phenolic active ingredient in Paeoniae Radix Alba, which is commonly used for the treatment of osteoporosis (OP). PGG is a potent natural antioxidant, and its effects on OP remain unknown. This study aimed to investigate the effects of PGG on promoting bone formation and explore its estrogen receptor (ER)-related mechanisms. A hydrogen peroxide-induced osteoblast apoptosis model was established in MC3T3-E1 cells. The effects of PGG were assessed using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay, flow cytometry, alkaline phosphatase (ALP) staining, RT-qPCR, and Western blot methods. Furthermore, a prednisolone-induced zebrafish OP model was employed to study the effects in vivo. ER inhibitors and molecular docking methods were used further to investigate the interactions between PGG and ERs. The results showed that PGG significantly enhanced cell viability and decreased cell apoptosis by restoring mitochondrial function, attenuating reactive oxygen species levels, decreasing the mitochondrial membrane potential, and enhancing ATP production. PGG enhanced ALP expression and activity and elevated osteogenic differentiation. PGG also promoted bone formation in the zebrafish model, and these effects were reversed by ICI182780. These results provide evidence that the effects of PGG in alleviating apoptosis and promoting bone formation may depend on ERs. As such, PGG is considered a valuable candidate for treating OP. Full article
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Article
Development of a Modular miRNA-Responsive Biosensor for Organ-Specific Evaluation of Liver Injury
by Xinxin Zhang, Tingting Wang, Xiangqing Fan, Meixia Wang, Zhixi Duan, Fang He, Hong-Hui Wang and Zhihong Li
Biosensors 2024, 14(9), 450; https://doi.org/10.3390/bios14090450 - 20 Sep 2024
Viewed by 1829
Abstract
MicroRNAs (miRNAs) are increasingly being considered essential diagnostic biomarkers and therapeutic targets for multiple diseases. In recent years, researchers have emphasized the need to develop probes that can harness extracellular miRNAs as input signals for disease diagnostics. In this study, we introduce a [...] Read more.
MicroRNAs (miRNAs) are increasingly being considered essential diagnostic biomarkers and therapeutic targets for multiple diseases. In recent years, researchers have emphasized the need to develop probes that can harness extracellular miRNAs as input signals for disease diagnostics. In this study, we introduce a novel miRNA-responsive biosensor (miR-RBS) designed to achieve highly sensitive and specific detection of miRNAs, with a particular focus on targeted organ-specific visualization. The miR-RBS employs a Y-structured triple-stranded DNA probe (Y-TSDP) that exhibits a fluorescence-quenched state under normal physiological conditions. The probe switches to an activated state with fluorescence signals in the presence of high miRNA concentrations, enabling rapid and accurate disease reporting. Moreover, the miR-RBS probe had a modular design, with a fluorescence-labeled strand equipped with a functional module that facilitates specific binding to organs that express high levels of the target receptors. This allowed the customization of miRNA detection and cell targeting using aptameric anchors. In a drug-induced liver injury model, the results demonstrate that the miR-RBS probe effectively visualized miR-122 levels, suggesting it has good potential for disease diagnosis and organ-specific imaging. Together, this innovative biosensor provides a versatile tool for the early detection and monitoring of diseases through miRNA-based biomarkers. Full article
(This article belongs to the Special Issue DNA Molecular Engineering-Based Biosensors)
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