Rice-Pathogen Interaction and Rice Immunity

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Plant Protection and Biotic Interactions".

Deadline for manuscript submissions: 10 February 2026 | Viewed by 2149

Special Issue Editors

School of Agriculture and Biology, Shanghai Jiaotong University, Shanghai, China
Interests: rice; crop protection; pathogens; plant biotechnology

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Guest Editor
State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory for Biology of Vegetable Diseases and Insect Pests, Shandong Agricultural University, Taian 271018, China
Interests: rice-pathogen interaction; disease resistance; plant immunity
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Guest Editor
School of Agriculture and Biology, Shanghai Jiaotong University, Shanghai, China
Interests: rice-pathogen interaction; disease resistance; plant immunity

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Guest Editor
Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
Interests: rice-pathogen interaction; disease resistance; plant immunity

Special Issue Information

Dear Colleagues,

Rice (Oryza sativa) is one of the most important food crops in the world, providing the basis for the staple food of billions of people. However, rice is often attacked by a variety of pathogens during its growth, such as Magnaporthe oryzae, Rhizoctonia solani, Xanthomonas oryzae and Ustilaginoidea virens, resulting in significant agricultural losses. Therefore, in-depth research on the interaction mechanism between rice and pathogens, as well as rice's own immune system, is of great significance for improving rice's disease resistance and ensuring food security.

As research progresses, rice has developed interesting and complex defense mechanisms to cope with the attacks of these pathogens. In addition to a basic defense, rice has also acquired the ability to recognize pathogens and produce dynamic molecular defense responses. The immune system of rice mainly includes innate immunity (PTI) and acquired immunity (ETI). Innate immunity initiates defense responses by recognizing pathogen-associated molecular patterns (PAMPs), while acquired immunity activates stronger responses by recognizing pathogen effectors. Pathogens inhibit the immune response of rice by secreting effectors, and rice recognizes these effectors by evolving resistance genes (R genes), thereby triggering immune responses. In this process, signaling pathways such as calcium ions, reactive oxygen species, and hormone signals (such as salicylic acid and jasmonic acid) jointly regulate the immune response of rice. In addition, non-coding RNA also plays an important role in rice immunity by regulating gene expression.

A better understanding of rice's defense mechanisms at the molecular level can provide information for effective pathogen control programs. By analyzing the rice–pathogen interaction mechanism, scientists have bred a variety of disease-resistant rice varieties. Future research will further reveal the complex immune signaling network and use gene editing and molecular breeding techniques to breed rice varieties with more broad-spectrum resistance to support global food security.

This Special Issue aims to highlight new findings or the utilization of molecular research in the following areas:

  • Mechanisms of rice–pathogen interaction;
  • Genetic improvement of rice disease-resistant germplasm;
  • Disease-resistant rice cultivar breeding;
  • Methods of inoculation and rating investigation;
  • Mapping and cloning of resistance genes;
  • Molecular genetic analysis of resistance (GWAS, etc.).

We are inviting articles (original research, reviews, methods, short communications, short reports) to expand our current understanding of the rice defense response.

Dr. Lifang Zou
Prof. Dr. Xinhua Ding
Dr. Zhengyin Xu
Dr. Youlun Xiao
Guest Editors

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Keywords

  • rice yield and immunity
  • crop genetic improvement
  • genome editing
  • disease resistance
  • rice–pathogen interaction
  • biotic stress

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Published Papers (2 papers)

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Research

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18 pages, 1689 KiB  
Article
Evaluation of Blast Resistance in Zinc-Biofortified Rice
by Anita Nunu, Maina Mwangi, Nchore Bonuke, Wagatua Njoroge, Mwongera Thuranira, Emily Gichuhi, Ruth Musila, Rosemary Murori and Samuel K. Mutiga
Plants 2025, 14(13), 2016; https://doi.org/10.3390/plants14132016 - 1 Jul 2025
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Abstract
Rice is a staple food for over half of the world’s population, and it is grown in over 100 countries. Rice blast disease can cause 10% to 30% crop loss, enough to feed 60 million people. Breeding for resistance can help farmers avoid [...] Read more.
Rice is a staple food for over half of the world’s population, and it is grown in over 100 countries. Rice blast disease can cause 10% to 30% crop loss, enough to feed 60 million people. Breeding for resistance can help farmers avoid costly fungicides. This study assessed the relationship between rice blast disease and zinc or anthocyanin content in biofortified rice. Susceptibility to foliar and panicle blast was assessed in a rice panel which differed on grain zinc content and pigmentation. A rice panel (n = 23) was challenged with inoculum of two isolates of Magnaporthe oryzae in a screenhouse-based assay. The zinc content with foliar blast severity was analyzed in the leaves and grain of a subset of non-inoculated rice plants. The effect of foliar zinc supplementation on seedlings was assessed by varying levels of zinc fertilizer solution on four blast susceptible cultivars at 14 days after planting (DAP), followed by inoculation with the blast pathogen at 21 DAP. Foliar blast severity was scored on a 0–9 scale at 7 days after inoculation. The rice panel was scored for anthocyanin content, and the data were correlated with foliar blast severity. The panel was grown in the field, and panicle blast, grain yield and yield-related agronomic traits were measured. Significant differences were observed in foliar blast severity among the rice genotypes, with IRBLK-KA and IR96248-16-2-3-3-B having mean scores greater than 4, as well as BASMATI 370 (a popular aromatic variety), while the rest of the genotypes were resistant. Supplementation with foliar zinc led to a significant decrease in susceptibility. A positive correlation was observed between foliar and panicle blast. The Zn in the leaves was negatively correlated with foliar blast severity, and had a marginally positive correlation with panicle blast. There was no relationship between foliar blast severity and anthocyanin content. Grain yield had a negative correlation with panicle blast, but no correlation was observed between Zn in the grain and grain yield. This study shows that Zn biofortification in the grain may not enhance resistance to foliar and panicle blast. Furthermore, the zinc-biofortified genotypes were not agronomically superior to the contemporary rice varieties. There is a need to apply genomic selection to combine promising alleles into adapted rice genetic backgrounds. Full article
(This article belongs to the Special Issue Rice-Pathogen Interaction and Rice Immunity)
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Review

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23 pages, 1166 KiB  
Review
Molecular Insights into Rice Immunity: Unveiling Mechanisms and Innovative Approaches to Combat Major Pathogens
by Muhammad Usama Younas, Bisma Rao, Muhammad Qasim, Irshad Ahmad, Guangda Wang, Quanyi Sun, Xiongyi Xuan, Rashid Iqbal, Zhiming Feng, Shimin Zuo and Maximilian Lackner
Plants 2025, 14(11), 1694; https://doi.org/10.3390/plants14111694 - 1 Jun 2025
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Abstract
Rice (Oryza sativa) is a globally important crop that plays a central role in maintaining food security. This scientific review examines the critical role of genetic disease resistance in protecting rice yields, dissecting at the molecular level how rice plants detect [...] Read more.
Rice (Oryza sativa) is a globally important crop that plays a central role in maintaining food security. This scientific review examines the critical role of genetic disease resistance in protecting rice yields, dissecting at the molecular level how rice plants detect and respond to pathogen attacks while evaluating modern approaches to developing improved resistant varieties. The analysis covers single-gene-mediated and multi-gene resistance systems, detailing how on one hand specific resistance proteins, defense signaling components, and clustered loci work together to provide comprehensive protection against a wide range of pathogens and yet their production is severely impacted by pathogens such as Xanthomonas oryzae (bacterial blight) and Magnaporthe oryzae (rice blast). The discussion extends to breakthrough breeding technologies currently revolutionizing rice improvement programs, including DNA marker-assisted selection for accelerating traditional breeding, gene conversion methods for introducing new resistance traits, and precision genome editing tools such as CRISPR/Cas9 for enabling targeted genetic modifications. By integrating advances in molecular biology and genomics, these approaches offer sustainable solutions to safeguard rice yields against evolving pathogens. Full article
(This article belongs to the Special Issue Rice-Pathogen Interaction and Rice Immunity)
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