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Interactions of Plant-Derived Foods and Medicines with the Gut Microbiome

A special issue of Molecules (ISSN 1420-3049).

Deadline for manuscript submissions: 31 January 2026 | Viewed by 3

Special Issue Editors


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Guest Editor
Department of Crop Sciences and Agroforestry, Faculty of Tropical AgriSciences, Czech University of Life Sciences Prague, Prague, Czech Republic
Interests: biologically active natural products; phytochemistry; food and agricultural chemistry; ethnobotany and ethnopharmacology
Special Issues, Collections and Topics in MDPI journals

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Guest Editor Assistant
Laboratory of Ethnobotany and Ethnopharmacology, Department of Crop Sciences and Agroforestry, Czech University of Life Sciences Prague, Prague, Czech Republic
Interests: ethnic foods, biological activities and compositional evaluation of edible natural products

Special Issue Information

Dear Colleagues,

Microbial communities within the gastrointestinal tract play a crucial role in maintaining health and preventing disease. While their homeostasis serves crucial salutary functions, inappropriate compositional changes can lead to dysbiosis and issues such as infections, inflammatory bowel disease, diabetes, cancer, atopy, and other autoimmune diseases. It is well established that plant-derived agents possess prebiotic, antimicrobial, anti-inflammatory, and immunomodulatory properties, making them key modulators of the microbiome. However, the complexity of the system still leaves a significant knowledge gap regarding the mechanisms and types of interactions between molecular components of these products and the gut microbiome, as well as their impact on health and disease development. Therefore, this Special Issue invites original research and review articles that investigate in vitro, in vivo, in situ, and ex vivo interactions between plant-derived dietary and medicinal products and the mammalian gut microbiome. This includes their complex, isolated, and simulated forms, such as whole food matrices, plant extracts, phytochemicals, plant nutrients, animal models, clinical trials, whole stool cultures, microbial isolates, and standard strains. Such information will deepen understanding and knowledge, which is particularly useful for the medicinal and food industries in the development of new plant-derived prebiotics, herbal food supplements, phytochemicals, food nutrients, phytopharmaceuticals, and functional foods.

Prof. Dr. Ladislav Kokoska
Guest Editor

Dr. Tomas Kudera
Guest Editor Assistant

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • anti-inflammatory effect
  • antimicrobial activity
  • fermented foods
  • gut metabolism
  • gut microbiota
  • herbal product
  • immunomodulatory effect
  • microbiome therapy
  • phytochemical
  • plant-based diet
  • postbiotics
  • prebiotic effect
  • probiotic microorganisms

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Published Papers

This special issue is now open for submission.
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