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Study on Organellar Genomes of Vascular Plants

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Plant Sciences".

Deadline for manuscript submissions: 30 November 2025 | Viewed by 651

Special Issue Editor


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Guest Editor
Department of Botany and Evolutionary Ecology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10-727 Olsztyn, Poland
Interests: botany; plant genetics

Special Issue Information

Dear Colleagues,

Plant organellar genomes, mitochondrial DNA (mtDNA), and chloroplast DNA (cpDNA) are key carriers of genetic information that exist in many copies in the cell and are fundamental to understanding plant cellular functions and evolutionary history. Chloroplast genomes were the first to be sequenced and described in plants and are essential for photosynthesis and other biosynthetic activities.

Chloroplast genomes, generally more conserved than mitochondrial genomes, range from 120 to 160 kb and contain genes crucial for photosynthesis, ribosomal proteins, and RNA components. Despite this conservation, cpDNA exhibits structural and content variations among plant lineages, indicative of a complex evolutionary trajectory involving gene duplication and transfer. Studies of chloroplast genomes have demonstrated their variability at the species level, and their polymorphic intergenic regions are now widely used in studies of phylogenetics, phylogeography, and molecular evolution.

Mitochondrial genomes are central to energy production, and in contrast to chloroplast genomes, they are well known for their very large size and have many unique features that distinguish them from animal mitogenomes. This variation is attributable to frequent recombination, horizontal gene transfer, and gene loss.

The research on these genomes has been propelled by advancements in sequencing technologies, which have provided deeper insights into their structure and evolution. These studies are crucial for understanding plant biology, including phylogeny, evolutionary adaptation, and cellular processes and responses to environmental stresses, thereby offering avenues for agricultural innovation and conservation strategies.

Therefore, this Special Issue aims to explore the latest advances in research on the topic. We welcome submissions of both original research and review articles.

Dr. Monika Szczecińska
Guest Editor

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Keywords

  • mitochondrial DNA (mtDNA)
  • chloroplast DNA (cpDNA)
  • plant evolution
  • plant organellar genome
  • genomics

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Published Papers (1 paper)

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Research

8 pages, 3450 KiB  
Communication
The Complete Chloroplast Genome of Water Crowfoot of Ranunculus cf. penicillatus and Phylogenetic Insight into the Genus Ranunculus (sect. Batrachium)
by Jurgita Butkuvienė, Donatas Naugžemys and Donatas Žvingila
Int. J. Mol. Sci. 2025, 26(14), 6953; https://doi.org/10.3390/ijms26146953 - 20 Jul 2025
Viewed by 262
Abstract
This study describes the first complete chloroplast genome of Ranunculus cf. penicillatus and provides new insights into the genetic composition and evolutionary relationships of the Ranunculus genus. The genome was assembled and characterized using high-throughput sequencing technologies, revealing a circular structure encompassing 158,313 [...] Read more.
This study describes the first complete chloroplast genome of Ranunculus cf. penicillatus and provides new insights into the genetic composition and evolutionary relationships of the Ranunculus genus. The genome was assembled and characterized using high-throughput sequencing technologies, revealing a circular structure encompassing 158,313 base pairs. Comparative analysis with the chloroplast genomes of related species within the Ranunculus genus highlights notable variations in structural organization, which can elucidate potential adaptive evolutionary mechanisms. Phylogenetic analyses conducted using the maximum likelihood approach resulted in the placement of Ranunculus cf. penicillatus within a well-defined clade, revealing its relationship with other taxa. This study not only enriches the existing plastid genomic data of the genus Ranunculus but also serves as an additional resource for future studies on the phylogenetics, systematics, and conservation biology of this diverse group of aquatic plants. The findings highlight the importance of complete chloroplast genomes in the Ranunculus section Batrachium, an evolutionarily young group of aquatic plants, for understanding plant diversity and evolution. The genome can be accessed on GenBank with the accession number PV690257. Full article
(This article belongs to the Special Issue Study on Organellar Genomes of Vascular Plants)
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