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DNA Damage Response from Molecular Mechanisms to Cancer Therapy

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Oncology".

Deadline for manuscript submissions: 20 September 2025 | Viewed by 1616

Special Issue Editors


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Guest Editor
Istituto Nazionale Tumori “Fondazione G. Pascale”, Napoli, Italy
Interests: DNA damage response; homologous recombination; DNA repair pathway choice; R-loop; post-translational modification; breast cancer; synthetic lethality

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Guest Editor
1. Sbarro Institute for Cancer Research and Molecular Medicine, Center for Biotechnology, Department of Biology, College of Science and Technology, Temple University, Philadelphia, PA 19122, USA
2. Department of Medical Biotechnology, University of Siena, 53100 Siena, Italy
Interests: cell cycle dependent kinase (CDK); retinoblastoma protein family; cancer therapy; mesothelioma; CDK9; Rb2
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Special Issue Information

Dear Colleagues,

The DNA damage response (DDR) could be defined as a double face of tumour: both the cause and treatment. Some DDR proteins are involved in the cancer-prone syndrome as in the ataxia telangiectasia (ATM) or Nijmegen Breakage syndrome (Nibrin), correlating them as tumour-developing factors. Conversely, the DNA repair defects are used as the “Achille’s heel” of cancer, favouring treatment with DNA damage agents through radiation therapy or cisplatin generating various kinds of DNA lesions (single or double strand breaks), although the side effects exerted on healthy tissue limits the use of this cancer therapy. In this scenario, the identification of novel therapeutic strategies based on the personal genetic makeup could be essential for improving the cancer treatments. To this aim, the dissection of novel proteins involved in the DDR plays an important role in cancer therapy. The discovery of highly selective actions of PARP inhibitors for BRCA1-/- breast cancer cells opened a “synthetic lethal era”. BRCA1 is one of the first players in the homologous recombination (HR), the error-free DNA repair mechanism based on the use of sister chromatids for genetic information stability. Moreover, the appearance of various resistance mechanisms to PARP inhibitors, such as functional BRCA1 and BRCA2 reactivation, the loss of 53BP1, or replication fork stability, suggest the necessary discovery of new players in order to bypass the tumour-resistance phenomena through the identification of alternative therapeutic targets.

This Special Issue will highlight novel discoveries in the context of the DNA damage response, from molecular mechanisms to clinical aspects, as potential novel strategies for cancer therapy. 

Dr. Luigi Alfano
Prof. Dr. Antonio Giordano
Guest Editors

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Keywords

  • DNA damage response
  • synthetic lethality
  • homologous recombination
  • cancer therapy

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Published Papers (1 paper)

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Research

24 pages, 4759 KiB  
Article
Proteomic Analysis of Biomarkers Predicting Treatment Response in Patients with Head and Neck Cancers
by Emeshaw Damtew Zebene, Rita Lombardi, Biagio Pucci, Hagos Tesfay Medhin, Edom Seife, Elena Di Gennaro, Alfredo Budillon and Gurja Belay Woldemichael
Int. J. Mol. Sci. 2024, 25(23), 12513; https://doi.org/10.3390/ijms252312513 - 21 Nov 2024
Cited by 1 | Viewed by 1308
Abstract
Head and neck cancers (HNCs) are the sixth most commonly diagnosed cancer and the eighth leading cause of cancer-related mortality worldwide, with squamous cell carcinoma being the most prevalent type. The global incidence of HNCs is steadily increasing, projected to rise by approximately [...] Read more.
Head and neck cancers (HNCs) are the sixth most commonly diagnosed cancer and the eighth leading cause of cancer-related mortality worldwide, with squamous cell carcinoma being the most prevalent type. The global incidence of HNCs is steadily increasing, projected to rise by approximately 30% per year by 2030, a trend observed in both developed and undeveloped countries. This study involved serum proteomic profiling to identify predictive clinical biomarkers in cancer patients undergoing chemoradiotherapy (CRT). Fifteen HNC patients at Tikur Anbessa Specialized Hospital, Radiotherapy (RT) center in Addis Ababa were enrolled. Serum samples were collected before and after RT, and patients were classified as responders (R) or non-responders (NR). Protein concentrations in the serum were determined using the Bradford assay, followed by nano-HPLC–MS/MS for protein profiling. Progenesis QI for proteomics identified 55 differentially expressed proteins (DEPs) between R and NR, with a significance of p < 0.05 and a fold-change (FC) ≥ 1.5. The top five-up-regulated proteins included MAD1L1, PSMC2, TRIM29, C5, and SERPING1, while the top five-down-regulated proteins were RYR1, HEY2, HIF1A, TF, and CNN3. Notably, about 16.4% of the DEPs were involved in cellular responses to DNA damage from cancer treatments, encompassing proteins related to deoxyribonucleic acid (DNA) damage sensing, checkpoint activation, DNA repair, and apoptosis/cell cycle regulation. The analysis of the relative abundance of ten proteins with high confidence scores identified three DEPs: ADIPOQ, HEY2, and FUT10 as potential predictive biomarkers for treatment response. This study highlighted the identification of three potential predictive biomarkers—ADIPOQ, HEY2, and FUT10—through serum proteomic profiling in HNC patients undergoing RT, emphasizing their significance in predicting treatment response. Full article
(This article belongs to the Special Issue DNA Damage Response from Molecular Mechanisms to Cancer Therapy)
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