Developing Bacterial Virus Deterrents to Challenges of Impending Postantibiotic Era: Phage Product Engineering, Therapy, Vaccines

A special issue of Antibiotics (ISSN 2079-6382).

Deadline for manuscript submissions: closed (31 December 2020) | Viewed by 24858

Special Issue Editors


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Guest Editor
Department of Biochemistry, Microbiology & Immunology, College of Medicine, University of Saskatchewan, Saskatoon, SK, Canada
Interests: molecular Genetics; bacteriophage vaccine generation

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Co-Guest Editor
NIH Emeritus Scientist (retired)
Interests: bacterial viruses (phage); molecular biology; basis of life; vaccines; infectious diseases; phage antibacterial therapy; artificial intelligence and machine learning; quantum mechanics; immunology

Special Issue Information

Dear Colleagues,

The possibility for identifying substances produced by bacteria that inhibited the growth of other bacteria was realized only a few years before the term antibiotic was coined by Waksman in 1943 (following the discoveries of penicillin and streptomycin). This represented a significant change in the philosophical approach to combating infectious disease. The term was used to designate substances of microbial origin which specifically inhibited the growth (biosynthetic activity) or integrity of other microbes. The further discovery and exploitation of these wonder drugs enabled elective surgeries and proved a deterrent to widespread ravages of infectious microorganisms plaguing the pre-antibiotic era. In the ensuing 80 years it has become increasingly more evident that bacteria can acquire mutations or genetic elements that confer resistance, or multiple levels of resistance, to antibiotics. A future post-antibiotic era threatens. In the two decades prior to the birth of antibiotics, Felix d’Herelle recognized the existence of natural substances, he termed phages, that could infect, multiply within, and burst from bacterial cells. Phage therapy was advanced as a means by which predator bacterial viruses could be exploited to contain infectious bacteria. We have come to realize that while phages represent the predominant microorganisms within the biosphere, the process and outcome of a phage infection is highly unique to the phage and target cell. Modern genetics, protein engineering, and data mining, can supplement the selection for compatible matches derived from natural sources. The thesis advanced is that with the wealth of modern molecular technology, bacterial viruses can finally be rationally exploited as antibiotic substitutes or as co-therapies to treat infectious disease. This can include strategies to identify and characterize receptors involved in phage-host interactions, the engineering of phages or their encoded proteins to target and kill selected bacterial cells, and the use of phages to display or express peptides that serve as vaccines or therapeutic agents.

Dr. Sidney Hayes
Dr. Carl Merril
Guest Editors

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Keywords

  • phage product engineering
  • phage therapy
  • phage vaccines

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Published Papers (3 papers)

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Research

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18 pages, 18599 KiB  
Article
Identification of a Depolymerase Specific for K64-Serotype Klebsiella pneumoniae: Potential Applications in Capsular Typing and Treatment
by Jiayin Li, Yueying Sheng, Ruijing Ma, Mengsha Xu, Fuli Liu, Rong Qin, Mingxi Zhu, Xianchao Zhu and Ping He
Antibiotics 2021, 10(2), 144; https://doi.org/10.3390/antibiotics10020144 - 1 Feb 2021
Cited by 18 | Viewed by 3603
Abstract
Carbapenem-resistant Klebsiella pneumoniae (CRKP), one of the major nosocomial pathogens, is increasingly becoming a serious threat to global public health. There is an urgent need to develop effective therapeutic and preventive approaches to combat the pathogen. Here, we identified and characterized a novel [...] Read more.
Carbapenem-resistant Klebsiella pneumoniae (CRKP), one of the major nosocomial pathogens, is increasingly becoming a serious threat to global public health. There is an urgent need to develop effective therapeutic and preventive approaches to combat the pathogen. Here, we identified and characterized a novel capsule depolymerase (K64-ORF41) derived from Klebsiella phage SH-KP152410, which showed specific activities for K. pneumoniae K64-serotype. We showed that this depolymerase could be used in the identification of K64 serotypes based on the capsular typing, and the results agreed well with those from the conventional serotyping method using antisera. From this study, we also identified K64 mutant strains, which showed typing discrepancy between wzi-sequencing based genotyping and depolymerase-based or antiserum-based typing methods. Further investigation indicated that the mutant strain has an insertion sequence (IS) in wcaJ, which led to the alteration of the capsular serotype structure. We further demonstrated that K64-ORF41 depolymerase could sensitize the bacteria to serum or neutrophil killing by degrading the capsular polysaccharide. In summary, the identified K64 depolymerase proves to be an accurate and reliable tool for capsular typing, which will facilitate the preventive intervention such as vaccine development. In addition, the polymerase may represent a potential and promising therapeutic biologics against CRKP-K64 infections. Full article
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Review

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17 pages, 889 KiB  
Review
Bacteriophage-Delivering Hydrogels: Current Progress in Combating Antibiotic Resistant Bacterial Infection
by Hyun Young Kim, Rachel Yoon Kyung Chang, Sandra Morales and Hak-Kim Chan
Antibiotics 2021, 10(2), 130; https://doi.org/10.3390/antibiotics10020130 - 29 Jan 2021
Cited by 51 | Viewed by 6334
Abstract
Antibiotic resistance remains as an unresolved global challenge in the health care system, posing serious threats to global health. As an alternative to antibiotics, bacteriophage (phage) therapy is rising as a key to combating antibiotic-resistant bacterial infections. In order to deliver a phage [...] Read more.
Antibiotic resistance remains as an unresolved global challenge in the health care system, posing serious threats to global health. As an alternative to antibiotics, bacteriophage (phage) therapy is rising as a key to combating antibiotic-resistant bacterial infections. In order to deliver a phage to the site of infection, hydrogels have been formulated to incorporate phages, owing to its favorable characteristics in delivering biological molecules. This paper reviews the formulation of phage-delivering hydrogels for orthopedic implant-associated bone infection, catheter-associated urinary tract infection and trauma-associated wound infection, with a focus on the preparation methods, stability, efficacy and safety of hydrogels as phage carriers. Full article
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29 pages, 1272 KiB  
Review
Phage-Encoded Endolysins
by Fatma Abdelrahman, Maheswaran Easwaran, Oluwasegun I. Daramola, Samar Ragab, Stephanie Lynch, Tolulope J. Oduselu, Fazal Mehmood Khan, Akomolafe Ayobami, Fazal Adnan, Eduard Torrents, Swapnil Sanmukh and Ayman El-Shibiny
Antibiotics 2021, 10(2), 124; https://doi.org/10.3390/antibiotics10020124 - 28 Jan 2021
Cited by 122 | Viewed by 13994
Abstract
Due to the global emergence of antibiotic resistance, there has been an increase in research surrounding endolysins as an alternative therapeutic. Endolysins are phage-encoded enzymes, utilized by mature phage virions to hydrolyze the cell wall from within. There is significant evidence that proves [...] Read more.
Due to the global emergence of antibiotic resistance, there has been an increase in research surrounding endolysins as an alternative therapeutic. Endolysins are phage-encoded enzymes, utilized by mature phage virions to hydrolyze the cell wall from within. There is significant evidence that proves the ability of endolysins to degrade the peptidoglycan externally without the assistance of phage. Thus, their incorporation in therapeutic strategies has opened new options for therapeutic application against bacterial infections in the human and veterinary sectors, as well as within the agricultural and biotechnology sectors. While endolysins show promising results within the laboratory, it is important to document their resistance, safety, and immunogenicity for in-vivo application. This review aims to provide new insights into the synergy between endolysins and antibiotics, as well as the formulation of endolysins. Thus, it provides crucial information for clinical trials involving endolysins. Full article
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