Antimicrobial Resistance Profiles of Bacteria Isolated from Households in Greater Letaba Municipality, South Africa
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Setting
2.2. Surface Sampling
2.3. Microbial Testing
2.4. Antimicrobial Susceptibility Testing
2.5. Quality Assurance
2.6. Data Analysis
3. Results
4. Discussion
Study Strength and Limitation
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| GLM | Greater Letaba Municipality |
| AST | Antimicrobial Susceptibility Testing |
| BPPL | Bacterial Priority Pathogens List |
| MDR | Multidrug Resistance |
| WHRC | Water and Health Research Centre |
| CLSI | Clinical and Laboratory Standards Institute |
| ESBL | Extended-spectrum β-lactamases |
| WHO | World Health Organization |
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| Bacterial Species (n) | Antimicrobial Agent (%) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ptn | HLG | CIP | ERY | LZD | TEI | VAN | TE | NF | |
| E. hirae n = 1 | R | 1 (100%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 1 (100%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | |
| E. avium n = 1 | R | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| E. gallinarum n = 2 | R | 1 (50%) | 2 (100%) | 2 (100%) | 0 (0%) | 0 (0%) | 2 (100%) | 1 (50%) | 1 (50%) |
| S | 1 (50%) | 0 (0%) | 0 (0%) | 2 (100%) | 2 (100%) | 0 (0%) | 1 (50%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | |
| E. faecium n = 4 | R | 1 (25%) | 2 (50%) | 4 (100%) | 0 (0%) | 1 (25%) | 2 (50%) | 0 (0%) | 4 (100%) |
| S | 3 (75%) | 0 (0%) | 0 (0%) | 4 (100%) | 3 (75%) | 2 (50%) | 4 (100%) | 0 (0%) | |
| I | 0 (0%) | 2 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| E. casseliflavus n = 1 | R | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| Bacterial Species (n) | Antimicrobial Agent (%) | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Ptn | AM | AMC | TZP | CXM | CXA | FOX | CTX | CAZ | CPM | ETP | IMI | MEM | AMI | GEN | TOB | CIP | TGC | COL | SXT | |
| E. aerogenes n = 2 | R | 0 (0%) | 1 (50%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 1 (50%) | 2 (100%) | 1 (50%) | 1 (50%) | 2 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) | 1 (50%) | 2 (100%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 1 (50%) | 2 (100%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 2 (100%) | |
| I | 0 (0%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| E. cancerogenus n = 2 | R | 0 (0%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | 1 (50%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| E. cloacae complex n = 6 | R | 0 (0%) | 6 (100%) | 6 (100%) | 6 (100%) | 6 (100%) | 6 (100%) | 6 (100%) | 6 (100%) | 2 (33%) | 4 (67%) | 4 (67%) | 3 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (17%) | 1 (17%) | 0 (0%) | 3 (50%) | 4 (67%) | 6 (100%) | 2 (33%) | 0 (0%) | 0 (0%) | 4 (67%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (50%) | 1 (17%) | 2 (33%) | 0 (0%) | 2 (33%) | 0 (0%) | 4 (67%) | 6 (100%) | 6 (100%) | 0 (0%) | 6 (100%) | |
| C. amalonaticus n = 2 | R | 0 (0%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 0 (0%) | 0 (0%) | 2 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 2 (33%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 0 (0%) | 2 (100%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 1 (50%) | 0 (0%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| K. oxytoca n = 9 | R | 9 (100%) | 4 (44%) | 3 (33%) | 9 (100%) | 8 (89%) | 2 (22%) | 2 (22%) | 2 (22%) | 2 (22%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 6 (67%) | 0 (0%) | 0 (0%) | 8 (89%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 3 (33%) | 0 (0%) | 1 (11%) | 7 (78%) | 4 (44%) | 1 (11%) | 1 (11%) | 5 (56%) | 0 (0%) | 7 (78%) | 3 (33%) | 7 (78%) | 3 (33%) | 7 (78%) | 9 (100%) | 0 (0%) | 0 (0%) | |
| I | 0 (0%) | 5 (56%) | 2 (22%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (33%) | 6 (67%) | 6 (67%) | 4 (44%) | 9 (100%) | 2 (22%) | 6 (67%) | 2 (22%) | 0 (0%) | 2 (22%) | 0 (0%) | 1 (11%) | 9 (100%) | |
| K. pneumoniae subsp. Ozaenae n = 1 | R | 1 (100%) | 0 (0%) | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 6 (67%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 1 (11%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | |
| I | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| K. pneumoniae subsp. Pneumoniae n = 5 | R | 5 (100%) | 3 (60%) | 3 (60%) | 5 (100%) | 5 (100%) | 4 (80%) | 3 (60%) | 3 (60%) | 3 (60%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 5 (100%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 2 (40%) | 0 (0%) | 0 (0%) | 1 (20%) | 2 (40%) | 1 (20%) | 2 (40%) | 1 (20%) | 1 (20%) | 4 (80%) | 5 (100%) | 5 (100%) | 5 (100%) | 5 (100%) | 5 (100%) | 0 (0%) | 5 (100%) | |
| I | 0 (0%) | 2 (40%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (20%) | 0 (0%) | 4 (80%) | 4 (80%) | 1 (20%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| Bacterial Species (n) | Antimicrobial Agent (%) | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Ptn | AM | AMC | TZP | CXM | CXA | FOX | CTX | CAZ | CPM | ETP | IMI | MEM | AMI | GEN | TOB | CIP | TGC | COL | SXT | |
| P. agglomerans n = 3 | R | 0 (0%) | 1 (33%) | 0 (0%) | 3 (100%) | 3 (100%) | 1 (33%) | 2 (67%) | 2 (67%) | 0 (0%) | 1 (33%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (33%) | 0 (0%) |
| S | 0 (0%) | 1 (33%) | 1 (33%) | 0 (0%) | 0 (0%) | 2 (67%) | 0 (0%) | 0 (0%) | 2 (67%) | 2 (67%) | 1 (33%) | 2 (67%) | 3 (100%) | 3 (100%) | 3 (100%) | 2 (67%) | 2 (67%) | 1 (33%) | 2 (67%) | |
| I | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (33%) | 1 (33%) | 1 (33%) | 0 (0%) | 2 (67%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (33%) | 1 (33%) | 1 (33%) | 0 (0%) | |
| R. planticola n = 3 | R | 3 (100%) | 0 (0%) | 0 (0%) | 2 (67%) | 2 (67%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (100%) | 0 (0%) |
| S | 0 (0%) | 1 (33%) | 3 (100%) | 1 (33%) | 0 (0%) | 3 (100%) | 3 (100%) | 1 (33%) | 1 (33%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (100%) | 3 (100%) | 3 (100%) | 3 (100%) | 3 (100%) | 0 (0%) | 0 (0%) | |
| I | 0 (0%) | 2 (67%) | 0 (0%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 2 (67%) | 2 (67%) | 3 (100%) | 0 (0%) | 3 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 3 (100%) | |
| P. aeruginosa n = 18 | R | 0 (0%) | 0 (0%) | 18 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 18 (100%) | 18 (100%) | 18 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (6%) | 18 (100%) | 18 (100%) | 8 (44%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 18 (100%) | 14 (78%) | 18 (100%) | 18 (100%) | 17 (94%) | 0 (0%) | 0 (0%) | 1 (6%) | 0 (0%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 4 (22%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 8 (44%) | 0 (0%) | |
| Salmonella spp. n = 1 | R | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 1 (100%) | 1 (100%) | 1 (100%) | 0 (0%) | 1 (100%) | 1 (100%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| S. fonticola n = 2 | R | 0 (0%) | 2 (100%) | 0 (0%) | 2 (100%) | 2 (100%) | 1 (50%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 2 (100%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 2 (100%) | 0 (0%) | 2 (100%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (50%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| S. marcescens n = 3 | R | 0 (0%) | 3 (100%) | 0 (0%) | 3 (100%) | 3 (100%) | 1 (33%) | 3 (100%) | 3 (100%) | 2 (67%) | 1 (33%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 2 (67%) | 0 (0%) | 0 (0%) | 3 (100%) | 0 (0%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 1 (33%) | 2 (67%) | 0 (0%) | 2 (67%) | 1 (33%) | 3 (100%) | 1 (33%) | 2 (67%) | 3 (100%) | 0 (0%) | 3 (100%) | |
| I | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 2 (67%) | 0 (0%) | 0 (0%) | 1 (33%) | 0 (0%) | 0 (0%) | 0 (0%) | |
| S. maltophilia n = 1 | R | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 1 (100%) |
| S | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | |
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Molewa, M.L.; Heine, L.; Barnard, T.G.; Naicker, N. Antimicrobial Resistance Profiles of Bacteria Isolated from Households in Greater Letaba Municipality, South Africa. Hygiene 2025, 5, 55. https://doi.org/10.3390/hygiene5040055
Molewa ML, Heine L, Barnard TG, Naicker N. Antimicrobial Resistance Profiles of Bacteria Isolated from Households in Greater Letaba Municipality, South Africa. Hygiene. 2025; 5(4):55. https://doi.org/10.3390/hygiene5040055
Chicago/Turabian StyleMolewa, Mapula Luckyjane, Lee Heine, Tobias George Barnard, and Nisha Naicker. 2025. "Antimicrobial Resistance Profiles of Bacteria Isolated from Households in Greater Letaba Municipality, South Africa" Hygiene 5, no. 4: 55. https://doi.org/10.3390/hygiene5040055
APA StyleMolewa, M. L., Heine, L., Barnard, T. G., & Naicker, N. (2025). Antimicrobial Resistance Profiles of Bacteria Isolated from Households in Greater Letaba Municipality, South Africa. Hygiene, 5(4), 55. https://doi.org/10.3390/hygiene5040055

