Performance Evaluation of the STANDARDTM Q COVID-19 and PanbioTM COVID-19 Antigen Tests in Detecting SARS-CoV-2 during High Transmission Period in Mozambique
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Setting and Participants
2.2. Data Collection
2.3. Antigen Rapid Assay testing
2.4. Real Time PCR Testing
2.5. Statistical Methods
3. Results
3.1. Patient Population
3.2. Diagnostic Performance of PanbioTM COVID-19 Ag Rapid Test
3.3. Diagnostic Performance of STANDARDTM Q COVID-19 Ag Test
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Total | Panbio COVID-19 Ag | Standard Q COVID-19 Ag | |||||
---|---|---|---|---|---|---|---|
N = 1277 | % Total | N = 551 | % Total | N = 726 | % Total | ||
Ag-TDR | Negative | 1002 | 78.47 | 456 | 82.76 | 546 | 75.21 |
Positive | 273 | 21.38 | 93 | 16.88 | 180 | 24.79 | |
Invalid | 2 | 0.16 | 2 | 0.36 | 0 | 0 | |
RT-PCR | Negative | 674 | 52.78 | 340 | 61.71 | 334 | 46.01 |
Positive | 580 | 45.41 | 209 | 37.93 | 371 | 51.10 | |
Excluded | 20 | 1.57 | 2 | 0.36 | 18 | 2.48 | |
Indeterminate | 3 | 0.23 | 0 | 0 | 3 | 0.41 | |
Health Facilities | CS de Marracuene | 298 | 23.33 | 19 | 3.45 | 279 | 38.43 |
HG Mavalane | 179 | 14.01 | 111 | 20.15 | 68 | 9.37 | |
HG Chamanculo | 372 | 29.13 | 237 | 43.01 | 135 | 18.6 | |
HP Matola | 428 | 33.51 | 184 | 33.39 | 244 | 33.61 | |
Age | Median in years | 38.0 | NA | 42 | NA | 38.0 | NA |
Sex | Female | 694 | 54.35 | 303 | 54.99 | 391 | 53.86 |
Male | 583 | 45.65 | 248 | 45.01 | 335 | 46.14 | |
Symptoms | Yes | 1075 | 84.18 | 480 | 87.11 | 595 | 81.96 |
No | 202 | 15.82 | 71 | 12.89 | 131 | 18.04 | |
Onset symptoms | ≤7 days | 817 | 76.00 | 364 | 75.83 | 453 | 76.13 |
>7 days | 252 | 23.44 | 116 | 24.17 | 136 | 22.86 | |
No information | 6 | 0.56 | 0 | 0 | 6 | 1.01 |
Sensitivity | Specificity | Positive Pred. Value | Negative Pred. Value | Misclassification | Observed Agreement | Chance Agreement | Cohen’s Kappa | ||
---|---|---|---|---|---|---|---|---|---|
Panbio COVID-19 Ag | Overall | 41.3% (34.6–48.4%) | 98.2% (96.2–99.3%) | 93.3% (88.8–97.8%) | 52.9% (48.6–57.1%) | 23.4% (19.9–27.2%) | 76.6% (31.9–80.1%) | 56.7% | 0.45 (0.44–0.46) |
With symptoms | 43.2% (36.0–50.5%) | 97.9% (95.5–99.2%) | 93.0% (88.4–97.7%) | 55.3% (50.8–59.8%) | 23.9% (20.2–28.0%) | 76.1% (32.0–79.8%) | 55.4% | 0.46 (0.45–0.47) | |
Without symptoms | 22.2% (6.4–47.6%) | 100.0% (93.3–NA) | 100.0% (100.0–NA) | 30.4% (19.4–41.4%) | 19.7% (11.2–30.9%) | 80.3% (25.4–88.8%) | 71.9% | 0.29 (0.04–0.56) | |
Onset symptoms ≤ 5 d 1 | 53.3% (42.6–63.7%) | 97.4% (93.5–99.3%) | 91.3% (84.7–98.0%) | 56.5% (50.2–62.8%) | 19.0% (14.3–24.5%) | 81.0% (32.4–85.7%) | 56.5% | 0.55 (0.53–0.57) | |
Onset symptoms ≤ 7 d | 49.6% (41.1–58.2%) | 97.7% (94.8–99.3%) | 93.1% (88.1–98.0%) | 57.3% (52.2–62.4%) | 20.8% (16.7–25.3%) | 79.2% (32.6–83.3%) | 55.4% | 0.52 (0.51–0.53) | |
Onset symptoms > 7 d | 25.5% (14.3–39.6%) | 98.4% (91.6–100.0%) | 92.9% (79.4–100.0%) | 50.4% (41.0–59.8%) | 33.9% (25.3–43.3%) | 66.1% (25.7–74.4%) | 54.7% | 0.25 (0.19–0.30) | |
Standard Q COVID-19 Ag | Overall | 45.0% (39.9–50.2%) | 97.6% (95.3–99.0%) | 95.4% (92.3–98.5%) | 66.4% (62.3–70.4%) | 30.2% (26.7–33.6%) | 69.8% (33.8–73.3%) | 48.6% | 0.41 (0.41–0.42) |
With symptoms | 49.4% (43.8–55.0%) | 97.6% (94.8–99.1%) | 96.4% (93.6–99.2%) | 71.5% (67.2–75.9%) | 29.8% (26.0–33.6%) | 70.2% (35.1–74.0%) | 47.2% | 0.44 (0.43–0.44) | |
Without symptoms | 13.3% (5.1–26.8%) | 97.6% (91.7–99.7%) | 75.0% (45.0–100.0%) | 37.6% (29.0–46.3%) | 31.8% (23.9–40.6%) | 68.2% (24.8–76.1%) | 63.2% | 0.14 (0.05–0.22) | |
Onset symptoms ≤ 5 d | 61.9% (53.9–69.4%) | 97.9% (94.1–99.6%) | 97.1% (93.8–100.0%) | 73.8% (67.8–79.9%) | 21.0% (16.6–26.0%) | 78.8% (36.9–83.4%) | 49.1% | 0.58 (0.57–0.59) | |
Onset symptoms ≤ 7 d | 54.5% (47.9–61.0%) | 98.0% (95.1–99.5%) | 96.9% (94.0–99.9%) | 71.1% (66.0–76.2%) | 25.2% (21.2–29.5%) | 74.8% (35.7–78.8%) | 48.6% | 0.51 (0.49–0.52) | |
Onset symptoms > 7 d | 35.2% (25.3–46.1%) | 95.6% (84.9–99.5%) | 93.9% (85.8–100.0%) | 74.3% (65.7–82.8%) | 44.4% (35.8–53.2%) | 55.6% (27.6–64.2%) | 41.9% | 0.24 (0.21–0.27) |
≤15 | ≤25 | ≥26 | ||
---|---|---|---|---|
Panbio COVID-19 Ag | Overall | 90.8% (59/65) | 52.7% (77/146) | 11.9% (7/59) |
With symptoms | 90.3% (56/62) | 52.9% (73/138) | 14.3% (7/49) | |
Without symptoms | 100% (3/3) | 50% (4/4) | 0% (0/10) | |
Onset symptoms ≤ 5 d | 90.2% (37/41) | 64.6% (42/65) | 13.0% (3/23) | |
Onset symptoms ≤ 7 d | 89.9% (49/51) | 61.5% (59/96) | 15.8% (6/38) | |
Onset symptoms > 7 d | 100% (7/7) | 35.7% (10/38) | 0% (0/10) | |
Standard Q COVID-19 Ag | Overall | 87.0% (109/124) | 55.4% (153/276) | 12.1% (14/116) |
With symptoms | 89.2% (107/120) | 60.0% (147/245) | 13.9% (14/81) | |
Without symptoms | 50.0% (2/2) | 0% (0/15) | 0% (0/15) | |
Onset symptoms ≤ 5 d | 94.5% (70/74) | 80% (93/125) | 13.3% (6/45) | |
Onset symptoms ≤ 7 d | 92.5% (87/94) | 66.3% (118/178) | 13.4% (9/67) | |
Onset symptoms > 7 d | 64.7% (11/17) | 50% (26/52) | 12.1% (4/33) |
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Sitoe, N.; Sambo, J.; Nguenha, N.; Chilaule, J.; Chelene, I.; Loquiha, O.; Mudenyanga, C.; Viegas, S.; Cunningham, J.; Jani, I. Performance Evaluation of the STANDARDTM Q COVID-19 and PanbioTM COVID-19 Antigen Tests in Detecting SARS-CoV-2 during High Transmission Period in Mozambique. Diagnostics 2022, 12, 475. https://doi.org/10.3390/diagnostics12020475
Sitoe N, Sambo J, Nguenha N, Chilaule J, Chelene I, Loquiha O, Mudenyanga C, Viegas S, Cunningham J, Jani I. Performance Evaluation of the STANDARDTM Q COVID-19 and PanbioTM COVID-19 Antigen Tests in Detecting SARS-CoV-2 during High Transmission Period in Mozambique. Diagnostics. 2022; 12(2):475. https://doi.org/10.3390/diagnostics12020475
Chicago/Turabian StyleSitoe, Nádia, Júlia Sambo, Neuza Nguenha, Jorfelia Chilaule, Imelda Chelene, Osvaldo Loquiha, Chishamiso Mudenyanga, Sofia Viegas, Jane Cunningham, and Ilesh Jani. 2022. "Performance Evaluation of the STANDARDTM Q COVID-19 and PanbioTM COVID-19 Antigen Tests in Detecting SARS-CoV-2 during High Transmission Period in Mozambique" Diagnostics 12, no. 2: 475. https://doi.org/10.3390/diagnostics12020475
APA StyleSitoe, N., Sambo, J., Nguenha, N., Chilaule, J., Chelene, I., Loquiha, O., Mudenyanga, C., Viegas, S., Cunningham, J., & Jani, I. (2022). Performance Evaluation of the STANDARDTM Q COVID-19 and PanbioTM COVID-19 Antigen Tests in Detecting SARS-CoV-2 during High Transmission Period in Mozambique. Diagnostics, 12(2), 475. https://doi.org/10.3390/diagnostics12020475