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Article

Genome-Wide Identification and Characterization of HSP70 Gene Family in Aquilaria sinensis (Lour.) Gilg

1
Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine, Ministry of Education and National Engineering Laboratory for Breeding of Endangered Medicinal Materials, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100193, China
2
Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine, Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization, Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou 570311, China
*
Authors to whom correspondence should be addressed.
Submission received: 14 November 2021 / Revised: 11 December 2021 / Accepted: 17 December 2021 / Published: 21 December 2021
(This article belongs to the Section Plant Genetics and Genomics)

Abstract

The heat shock protein 70 (HSP70) gene family perform a fundamental role in protecting plants against biotic and abiotic stresses. Aquilaria sinensis is a classic stress-induced medicinal plant, producing a valuable dark resin in a wood matrix, known as agarwood, in response to environmental stresses. The HSP70 gene family has been systematic identified in many plants, but there is no comprehensive analysis at the genomic level in A. sinensis. In this study, 15 putative HSP70 genes were identified in A. sinensis through genome-wide bioinformatics analysis. Based on their phylogenetic relationships, the 15 AsHSP70 were grouped into six sub-families that with the conserved motifs and gene structures, and the genes were mapped onto six separate linkage groups. A qRT-PCR analysis showed that the relative expression levels of all the AsHSP70 genes were up-regulated by heat stress. Subcellular localization of all HSP70s was predicted, and three were verified by transiently expressed in Arabidopsis protoplasts. Based on the expression profiles in different tissues and different layers treated with Agar-Wit, we predict AsHSP70 genes are involved in different stages of agarwood formation. The systematic identification and expression analysis of HSP70s gene family imply some of them may play important roles in the formation of agarwood. Our findings not only provide a foundation for further study their biological function in the later research in A. sinensis, but also provides a reference for the analysis of HSPs in other species.
Keywords: Aquilaria sinensis; agarwood; heat shock protein 70 family; genome-wide analysis Aquilaria sinensis; agarwood; heat shock protein 70 family; genome-wide analysis
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MDPI and ACS Style

Yu, C.; Rong, M.; Liu, Y.; Sun, P.; Xu, Y.; Wei, J. Genome-Wide Identification and Characterization of HSP70 Gene Family in Aquilaria sinensis (Lour.) Gilg. Genes 2022, 13, 8. https://doi.org/10.3390/genes13010008

AMA Style

Yu C, Rong M, Liu Y, Sun P, Xu Y, Wei J. Genome-Wide Identification and Characterization of HSP70 Gene Family in Aquilaria sinensis (Lour.) Gilg. Genes. 2022; 13(1):8. https://doi.org/10.3390/genes13010008

Chicago/Turabian Style

Yu, Cuicui, Mei Rong, Yang Liu, Peiwen Sun, Yanhong Xu, and Jianhe Wei. 2022. "Genome-Wide Identification and Characterization of HSP70 Gene Family in Aquilaria sinensis (Lour.) Gilg" Genes 13, no. 1: 8. https://doi.org/10.3390/genes13010008

APA Style

Yu, C., Rong, M., Liu, Y., Sun, P., Xu, Y., & Wei, J. (2022). Genome-Wide Identification and Characterization of HSP70 Gene Family in Aquilaria sinensis (Lour.) Gilg. Genes, 13(1), 8. https://doi.org/10.3390/genes13010008

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