Origin of Bluetongue Virus Serotype 8 Outbreak in Cyprus, September 2016
- Supplementary File 1:
ZIP-Document (ZIP, 264 KiB)
Externally hosted supplementary file 1
Description: Table S1. Historical reference strains of BTV sequenced during this study and associated Genbank accession number for the genome segments. Figure S1. Phylogenetic trees were constructed for the coding regions of BTV a) VP1 protein (segment-1), b) VP3 protein (segment-3, c) NS1 protein (segment-5), d) VP5 protein (segment-6), and e) NS2 protein (segment-8). Maximum likelihood trees were constructed using IQ-Tree software  and the reliability of each tree was estimated by ultrafast bootstrap  analysis of 1000 replicates (bootstrap values of < 95% are not displayed). Figure S2. Aggregated trajectory densities of the forward NAME runs for three potential incursions of BTV infected midges to Cyprus. The figures show incursions with: a) a 24-hour flight time from sunset on 2016/09/07; b) a 36-hour flight time from sunrise on 2016/08/30; and c) a 24-hour flight time from sunset on 2016/08/20. Five sources are shown: 1 - northern Syria, 2 - southern Syria and northern Lebanon, 3 - central Lebanon, 4 - southern Lebanon and northern Israel, 5 - central Israel (as in Table 2).
Rajko-Nenow, P.; Christodoulou, V.; Thurston, W.; Ropiak, H.M.; Savva, S.; Brown, H.; Qureshi, M.; Alvanitopoulos, K.; Gubbins, S.; Flannery, J.; Batten, C. Origin of Bluetongue Virus Serotype 8 Outbreak in Cyprus, September 2016. Viruses 2020, 12, 96. https://doi.org/10.3390/v12010096
Rajko-Nenow P, Christodoulou V, Thurston W, Ropiak HM, Savva S, Brown H, Qureshi M, Alvanitopoulos K, Gubbins S, Flannery J, Batten C. Origin of Bluetongue Virus Serotype 8 Outbreak in Cyprus, September 2016. Viruses. 2020; 12(1):96. https://doi.org/10.3390/v12010096Chicago/Turabian Style
Rajko-Nenow, Paulina, Vasiliki Christodoulou, William Thurston, Honorata M. Ropiak, Savvas Savva, Hannah Brown, Mehnaz Qureshi, Konstantinos Alvanitopoulos, Simon Gubbins, John Flannery, and Carrie Batten. 2020. "Origin of Bluetongue Virus Serotype 8 Outbreak in Cyprus, September 2016" Viruses 12, no. 1: 96. https://doi.org/10.3390/v12010096