Search Results (125)

Colletotrichum kahawae is the causal agent of coffee berry disease (CBD), a disease restricted to African countries producing C. arabica, which affects coffee production and is a potential phytosanitary threat for coffee plants growing at other latitudes. The inheritance of resistance to C. kahawae conferred by the R gene (Ck-2/Ck-3) in the Rume Sudan variety of coffee was previously reported as simple Mendelian (3:1). However, our results derived from an $F_2$ population of 10,180 hypocotyls, similar to the resistance observed in Rume Sudan against C. kahawae, reveals a polygenic involvement. Therefore, resistance to CBD cannot be explained by a Mendelian segregation model, since the observed phenotypic interactions reveals that resistance involves a system of genes [quantitative trait loci (QTLs)]. Similarly, the genetic potential for resistance of a wild genotype of C. arabica ET.56 to C. kahawae was evaluated, and its segregation was also evident in its phenotypic interactions, similar to that of Rume Sudan. However, differences in the phenotypic expression of their segregated populations potentially suggest that the genetic mechanisms responsible for resistance to C. kahawae in these two varieties are likely different. Finally, statistical analysis revealed the existence of the C. arabica/C. kahawae interaction and the consequent existence of pathotypes, demonstrating that resistance is not transversal but specific to C. kahawae isolates. This behavior is consistent with that previously reported based on the genetic diversity of C. kahawae and can be used in genetic improvement programs for C. arabica to enhance the development of varieties resistant to the disease. Full article

Berry skin color CIE parameters, pH and anthocyanidin profiling of 46 grape accessions were investigated using CIE Lab system, pH measurement and anthocyanidin profiling. CIE parameters separated the samples into three groups: yellowish-green, pinkish-red, and purplish-black, and principal component analysis confirmed clear clustering, with the first two components explaining 99.1% of the variance. After anthocyanidin analysis, cyanidin was detected in all samples, whereas trace-level pelargonidin derivatives were identified by UPLC-MS/MS. Total anthocyanidin content was insufficient to evaluate the quality of berry color, but anthocyanidin composition and relative proportions showed a stronger association with color classification. Yellowish-green berries were enriched in cyanidin, while purplish berries contained more malvidin- and cyanidin. Multivariate analysis identified cyanidin, malvidin, and peonidin derivatives as the main drivers of berry skin color variations. Skin homogenate pH ranged from 3.36 to 4.63 and it was lower in wild grape relatives. Correlation analysis indicated that pH was associated with color parameters. Species-related differences in anthocyanidin glycosylation and acylation were evident, and mono/diglucosides may have potential effects on skin color. Overall, skin color appears to depend on anthocyanidin composition, relative proportions, and pH, offering a chemical basis for grape breeding and fruit quality evaluation. Full article

To identify Coffea arabica genotypes with enhanced resistance to the coffee berry borer (CBB), Hypothenemus hampei, two wild accessions (C306 and C534) and their derived hybrids were evaluated. Four F1 genotypes—H1 (CU1842 × C306), H2 (CX2385 × C534), H3 (CX2385 × C306), and H4 (CX2848 × C534)—were generated and subsequently mass-propagated in vitro via somatic embryogenesis. In the original F1 hybrids, laboratory bioassays using artificial coffee diets showed that while CBB mortality in susceptible controls (Var. Caturra and maternal lines) did not exceed 15%, paternal lines induced 31–49%, and hybrids H1 and H3 reached 26%. Population suppression was further quantified in infested parchment coffee, where these hybrids exhibited intermediate CBB numbers between parents. Subsequent field evaluations in Caldas, Colombia, confirmed that H1 and H3 maintained CBB populations up to 43% lower than maternal lines (p < 0.05). To verify the stability of the resistance trait after clonal multiplication, a five-year field study was conducted in Risaralda, Colombia, using in vitro-propagated clones. These regenerated hybrids (H1, H2, and H3) demonstrated stable phenotypic expression, achieving up to a 70% reduction in CBB populations in the field compared to commercial varieties. Specifically, H1 and H3 clones induced significantly higher insect mortality (up to 47%) and superior population suppression. Furthermore, by manifesting hybrid vigor, cumulative production was significantly higher in all four hybrids than in commercial controls, with H3, H1, and H4 exhibiting the highest yields. Based on the dual criteria of useful heterosis for yield and stable pest resistance, these results identify the most promising hybrid combinations which integrate elite agronomic traits with stable resistance, providing a strategic genetic resource for sustainable coffee production under climatic change conditions. Full article

To clarify the genetic background and biological characteristics of grape germplasm resources and provide theoretical support for germplasm innovation and new-variety breeding, we conducted systematic morphological identification and SSR molecular-marker analysis on 38 core grape germplasms (29 fresh-eating cultivars, 1 local cultivar, and 8 wild germplasms) from the National Southeast Mountainous Crop Germplasm Repository (Jiangxi·Yichun) and other regions. For morphological identification, 14 quantitative traits and 5 descriptive traits of leaves, floral organs and fruits were determined in strict accordance with the NY/T 2932-2016 Descriptors for Grape Germplasm Resources. For SSR molecular-marker analysis, eight pairs of internationally universal core primers were used for PCR amplification and fluorescence detection referring to the NY/T 3640-2020 Identification of Grape Cultivars Using SSR Markers, and genetic diversity analysis was conducted on 11 local and wild grape germplasms. The results revealed abundant phenotypic diversity among the tested germplasms: the functional leaves of cultivars were predominantly pentagonal and cuneate, while those of wild germplasms were mostly reniform and cordate, with 3–5 lobes for most germplasms; all germplasms were hermaphroditic, except for two wild accessions with unisexual flowers. Significant variations were observed in fruit traits, with the coefficient of variation (CV) of cluster weight and berry weight reaching 67.64% and 50.53%, respectively. The genetic plasticity of weight-related traits was much higher than that of shape- and length-related traits, and the average Shannon–Wiener index (H′) of 19 morphological traits was 3.47, indicating a high level of overall phenotypic diversity. SSR analysis showed that the eight primer pairs amplified a total of 42 genotypes (5.25 per primer pair on average). The population had a mean observed number of alleles (Na) of 5.28, a mean effective number of alleles (Ne) of 7.25, and a mean polymorphism information content (PIC) of 0.74, demonstrating rich genetic diversity and high polymorphism of the tested loci. Cluster analysis divided the 11 local germplasms into four groups, which clearly reflected the genetic relationships among them, and genetic admixture was found in some germplasms due to unclear introduction traceability. In this study, fresh-eating grape cultivars suitable for the climatic conditions of Jiangxi Province were screened, the utilization value of local germplasm resources was clarified, and a two-dimensional evaluation system based on phenotypic traits and SSR molecular markers was constructed. The findings provide basic data and a scientific basis for the precise evaluation, elite gene mining, and new-variety breeding of grape germplasm resources in Jiangxi Province. Full article

Most dementias are preceded by mild cognitive impairment (MCI), a transitional clinical stage characterized by cognitive decline that does not yet significantly interfere with activities of daily living. Obesity and diabetes are among the major risk factors for MCI and are strongly associated with unhealthy lifestyle patterns. The growing global prevalence of obesity has intensified the need for effective dietary strategies that promote both weight control and neuroprotection. Red fruits, which are rich in bioactive compounds such as anthocyanins, have demonstrated potential roles in modulating metabolic pathways and cognitive function. This systematic review aimed to identify and synthesize evidence from human studies published over the past two decades that examined the effects of red fruit consumption on obesity-related mechanisms and cognitive outcomes, as well as its influence on key neurodegenerative biomarkers, including TAU protein, β-amyloid, and neurofilament light chain. A systematic search was conducted in major scientific databases to identify human clinical trials evaluating the metabolic and neuroprotective effects of berry-derived compounds. Eligible studies were screened for outcomes related to cognitive performance, obesity-related parameters, and relevant molecular biomarkers. The included studies reported modest improvements in cognitive domains, with the most consistent effects observed in memory-related outcomes. Berry-derived bioactive compounds demonstrated potential in attenuating TAU protein hyperphosphorylation and reducing β-amyloid accumulation; however, the available evidence remains limited and requires further confirmation. Human clinical studies remain scarce, and although some trials reported favorable metabolic effects, these findings are still inconclusive. Reported outcomes included improvements in insulin sensitivity, regulation of leptin levels, and modulation of the gut–brain axis, which may collectively contribute to a reduced risk of obesity. Based on the studies evaluated in this review, there remains a limited number of human clinical trials that robustly support the neuroprotective and complementary metabolic effects of berry-derived bioactive compounds. Nevertheless, the available evidence suggests that dietary strategies incorporating wild fruits rich in polyphenols may represent a promising complementary approach for the prevention of mild cognitive impairment (MCI) and obesity, with potential implications for reducing the risk of dementia progression. Full article

Nordic forest management is increasingly emphasizing multi-functional goals, expanding beyond timber production towards non-wood forest products such as wild berries. Wild berry yield maps are based on sample plot data combined with meteorological, remote sensing, and geoinformation data. Automating sample plot data processing is crucial, as manual collection is labor-intensive, time-consuming, and complicated by short berry seasons and fluctuating yields. This study compares two methods for automatic bilberry detection and counting: a deep learning detector YOLO and a machine learning model using the segment anything model (SAM) followed by a random forest classification (SAM-RF). Both system camera and drone imagery were evaluated as input data. YOLOv8 clearly outperformed SAM–RF in berry detection, achieving an $R^2$ of 0.98 and an RMSE of 3.8 berries when evaluated against annotated system camera images, compared to an $R^2$ of 0.80 for SAM–RF. System camera imagery consistently produced higher accuracy than drone imagery due to higher image clarity and more optimal viewing angles, with YOLOv8 achieving an $R^2$ of 0.95 against field counts, compared to 0.81 for drone images. The results also indicate that the primary error source in berry counting arises from the fact that many berries are not visible in the captured images. The results from the data analysis support the use of the developed technologies in yield modeling and even in implementing future ‘follow-me’ drone berry assistants. Full article

This research addresses the critical need for efficient image annotation in precision agriculture, using the wild blueberry (Vaccinium angustifolium Ait.) cropping system as a representative application to enable data-driven crop management. Tasks such as automated berry ripeness detection, plant disease identification, plant growth stage monitoring, and weed detection rely on extensive annotated datasets. However, manual annotation is labor-intensive, time-consuming, and impractical for large-scale agricultural systems. To address this challenge, this study evaluates an automated annotation pipeline that integrates zero-shot detection models from two frameworks (Grounding DINO and YOLO-World) with the Segment Anything Model version 2 (SAM2). The models were tested on detecting and segmenting ripe wild blueberries, developmental wild blueberry buds, hair fescue (Festuca filiformis Pourr.), and red leaf disease (Exobasidium vaccinii). Grounding DINO consistently outperformed YOLO-World, with its Swin-T achieving mean Intersection over Union (mIoU) scores of 0.694 ± 0.175 for fescue grass and 0.905 ± 0.114 for red leaf disease when paired with SAM2-Large. For ripe wild blueberry detection, Swin-B with SAM2-Small achieved the highest performance (mIoU of 0.738 ± 0.189). Whereas for wild blueberry buds, Swin-B with SAM2-Large yielded the highest performance (0.751 ± 0.154). Processing times were also evaluated, with SAM2-Tiny, Small, and Base demonstrating the shortest durations when paired with Swin-T (0.30–0.33 s) and Swin-B (0.35–0.38 s). SAM2-Large, despite higher segmentation accuracy, had significantly longer processing times (significance level α = 0.05), making it less practical for real-time applications. This research offers a scalable solution for rapid, accurate annotation of agricultural images, improving targeted crop management. Future research should optimize these models for different cropping systems, such as orchard-based agriculture, row crops, and greenhouse farming, and expand their application to diverse crops to validate their generalizability. Full article

The growing demand for sustainable, health-promoting foods has intensified efforts to improve the antioxidant potential of berry crops through integrative agronomic, genomic, and breeding innovations. Berries are rich dietary sources of bioactive compounds that support human health and provide benefits far beyond basic nutrition. This review explores the diversity of major berry crops, including blueberries, raspberries, cranberries, blackberries, and grapes, with emphasis on their nutritional value and antioxidant profiles. It also examines their domestication history, wild relatives, and commercial cultivars, offering insight into the genetic and phenotypic diversity underlying their rich chemical composition. Furthermore, the review highlights the application of modern tools to enhance antioxidant content. By integrating agronomic practices such as seed priming and grafting, advanced molecular breeding technologies, including multi-omics, genome-wide association studies (GWAS), and genome editing, breeders and researchers can accelerate the development of high-value berry cultivars that combine superior nutritional quality, resilience to environmental stress, and sustainable productivity under the challenges posed by climate change. Full article

This study evaluates how different purification methods influence the antioxidant properties of polyphenol-rich berry pomace extracts, taking into account both the source of the pomace and the purification strategy used. The extracts were obtained from raspberry, blackberry, strawberry, and wild strawberry pomaces derived from the production of unclarified juices and purées. The extracts were analyzed in three states: crude (CEX), purified using Amberlite XAD 1600N adsorbent resin (XAD), and purified via size-exclusion chromatography (SEC) on a gel filtration resin. Ellagitannins, flavanols, and anthocyanins were determined using HPLC-DAD-FD methods. Antioxidant properties were determined based on: total antioxidant compounds, DPPH radical scavenging activity, and Fe³⁺ ion reduction power. Purification significantly enhanced the concentration of antioxidant compounds, which increased 2-fold with the XAD method and more than 3-fold using SEC. The extracts exhibited strong DPPH radical scavenging activity, ranging from 65% to 90% for raspberry and blackberry extracts and from 34% to 95% for strawberry and wild strawberry extracts, depending on the degree of purification. Similarly, Fe³⁺-reducing power increased 2- to 6-fold in extracts purified using XAD and SEC compared to crude extracts. Purification via size-exclusion chromatography enabled the separation of tannin-rich and anthocyanin-rich extract fractions. Ellagitannins were the main class of polyphenols contributing to the enhanced antioxidant potential. Anthocyanins contributed significantly to antioxidant activity only in the case of blackberry extracts. Full article

Plant domestication has led to a series of morphological and physiological changes aimed at making species more suitable for human use and consumption. In Vitis vinifera ssp. sativa, these changes include increased sugar content and berry size, modifications in seed morphology, and the transition from dioecy to hermaphroditism. This process, which began approximately 6000–8000 years ago in the Transcaucasian region, unfolded in multiple stages and involved the natural abandonment of wild Vitis populations. While it contributed to the phenotypic diversification of modern grapevine cultivars, it also came at the expense of biodiversity. Selection for yield and quality has resulted in the loss of resilience traits in cultivated grapevines. In this study, 23 Vitis species of American origin were examined, analyzing for each their native range, susceptibility to biotic and abiotic stresses, and their suitability for propagation. The study, characterization, and compilation of these American Vitis species provide a valuable resource for consultation and use in targeted grapevine breeding programs. These efforts aim to recover adaptive traits from wild progenitors, enhance the resilience of cultivated grapevines, and address the challenges posed by modern agriculture and sustainability. Full article

Calafate berry, an ancient perennial shrub of South America (Chile and Argentina), produces a high antioxidant capacity berry with a high polyphenol (1344.2–6553 mg GAE/100 g d.w.) and anthocyanin (26.5–80 mg C-3-G/100 g d.w.) content. The beneficial effects of calafate berries on human health are related to the anti-inflammatory, hypoglycemic, anticancer, and antioxidant properties that the berries possess, which have been confirmed through evidence to date, primarily from in vitro, ex vivo, and animal studies. Several investigations have shown a relationship between the consumption of calafate and a reduction in the risk of contracting cardiovascular diseases (CVD). This was evident in changes in plasma level biomarkers related to CVD, such as thrombomodulin (−24%), adiponectin (+68%), sE-selectin (−34%), sICAM-1 (−24%) and proMMP-9 (−31%), and changes in the production of OH radicals in plasma (−17%) after calafate intake. Calafate may have an antithrombotic role that supports cardiovascular health by lowering the Atherogenic and Cardiovascular Risk Indices. Various authors indicate delphinidin-3-glucoside (384–386 mg/100 g) as the primary bioactive compound responsible for the beneficial properties of Calafate. Although some studies report calafate’s health benefits, scientific evidence, especially in humans, remains limited. Meanwhile, Chile is working to domesticate and cultivate calafate, aiming to turn it from a wild native berry into a sustainable crop for use in the antioxidants and nutraceuticals industry. The lack of human clinical trials emphasizes the need for future research to validate calafate’s health benefits berry. Full article

For the first time, the effect of low-temperature vacuum drying (LTVD) on wild murta (Ugni molinae Turcz) was evaluated, in comparison with freeze-drying (FD) and vacuum drying (VD), to assess their capacity to preserve bioactive compounds and associated bioactivities. Murta was dried using LTVD at 20, 30, and 40 °C under a constant vacuum of 10 mbar, where FD and VD at 60 °C (VD 60) were included as comparative methods. The content of fatty acids and tocols, along with the retention of bioactive compounds and their antioxidant, anti-inflammatory, cytotoxic, and α-glucosidase inhibitory activities, were systematically analyzed. LTVD- and VD-dried murta exhibited higher polyunsaturated-to-saturated fatty acid ratios (>9.0) and markedly greater tocol contents, whereas FD maintained a more balanced ratio (<5.0) but with lower tocol levels. While FD was most effective in preserving catechin, higher levels of other phenolic compounds were observed in samples dried by LTVD at 20 and 40 °C, as well as VD 60, possibly due to the release of bound forms during processing. The drying method significantly influenced murta bioactivity. LTVD 30 preserved the highest antioxidant capacity, while topical anti-inflammatory effects on skin lesions varied by pathway, with LTVD 40 being the most effective in the TPA model and FD in the AA model. These effects were evaluated only using a topical inflammation model in BALB/c mice of both sexes; dietary effects were not assessed in this study. Regarding other bioactivities, VD 60 extracts excelled in both cytotoxic and α-glucosidase inhibitory effects, whereas FD extracts were the most effective against AGS cells and LTVD 20 against α-glucosidase. In conclusion, LTVD emerges as a promising alternative to FD and VD, showing potential to preserve bioactive compounds and key bioactivities of wild murta, although further studies are needed to elucidate the underlying mechanisms. Full article

Carpel number has been recognized as a critical factor influencing fruit size, ultimately determining yield and economic efficiency. The WUSCHEL (WUS) protein is essential for maintaining stem cell homeostasis in the floral meristem. Its expression level directly influences the size of the floral meristem (FM), thereby determining the number of floral organs in Arabidopsis thaliana, Solanum lycopersicum, and Cucumis sativus. While its role remained largely unexplored in grapevine (Vitis vinifera). This study cloned the VvWUS gene from the polycarpic grape cultivar ‘Jizaomi’. Transgenic tomato lines expressing VvWUS heterologously exhibited accelerated floral transition, enhanced carpel/floral organ initiation, and had significantly higher locule numbers relative to wild type. Furthermore, direct binding of VvWUS to the VvAGAMOUS (VvAG) promoter and activation of VvAG expression were demonstrated through yeast one-hybrid (Y1H) and dual-luciferase (LUC) assays. These findings elucidated the molecular function of VvWUS in grape carpel development, providing a foundational basis for molecular breeding strategies targeting large-berry grape varieties. Full article

The Rubus genus includes numerous berry species known for their rich phytochemical content and antioxidant properties. However, comparative evaluations of wild and cultivated Rubus germplasms in East Asia remain limited. This study aimed to identify superior resources with potential for use in functional foods and breeding through integrated phytochemical and antioxidant profiling. Fifteen accessions collected across Korea were assessed for fruit coloration, total phenolic content (TPC), total flavonoid content (TFC), five antioxidant activities (DPPH, ABTS⁺, superoxide, ferric-reducing activity power, and Fe²⁺ chelation), and anthocyanin composition by high-performance liquid chromatography‒Mass spectrometry. The TPC ranged from 1.03 to 7.54 mg g⁻¹ of frozen fruit, and TFC ranged from 2.75 to 7.52 mg g⁻¹ of frozen fruit, with significant differences among accessions (p < 0.05). Black-colored fruits such as R. coreanus and R. ursinus varieties exhibited high anthocyanin levels (approximately total 471 and 316 mg g⁻¹ extracts, respectively), with cyanidin-O-hexoside and cyanidin-3-O-glucoside being the dominant pigments. However, the antioxidant performance of these accessions varied. A wild R. crataegifolius (no. 9, resource F) showed the highest TPC and ranked within the top five in multiple antioxidant assays, despite its moderate anthocyanin content. Correlation analysis revealed that TPC and TFC were significantly associated with antioxidant activity (p < 0.05) but not directly with anthocyanin content. These results suggest that antioxidant potential is influenced by a broader spectrum of phenolic compounds, rather than anthocyanins alone. These findings underscore the need to look beyond visual traits and focus on biochemical evidence when selecting elite Rubus accessions. Full article

Wild edible plants, historically valued for their medicinal properties, can be a sustainable source of food, cosmetics, and pharmaceuticals. The blue berries of Prunus spinosa L., known as blackthorns, have antioxidant, astringent, and antimicrobial benefits. To preserve these properties after harvesting, understanding the best storage methods is essential. In this study, blackthorns were preserved using different methods (air-drying, freezing, or freeze-drying) to determine the optimal procedure for preserving their antioxidant activity. The fruits were extracted using a 50:50 (V/V) mixture of ethanol and water. The different extracts were phytochemically characterized for their phenolic content and antioxidant activity. The Folin–Ciocalteu test revealed total phenolic contents of 7.97 ± 0.04, 13.99 ± 0.04, and 7.39 ± 0.08 (mg GAE/g raw material) for the three types of extracts, respectively. The total flavonoid contents were 2.42 ± 0.16, 3.14 ± 0.15, and 2.32 ± 0.03 (mg QE/g raw material), respectively. In line with the polyphenol analysis, the antioxidant activity as determined by DPPH method was higher for the frozen extract, with a value of 91.78 ± 0.80%, which was confirmed by the ROS test on keratinocytes. These results show that both air-drying and freeze-drying processes negatively impact the preservation of antioxidant activity in blackthorns, suggesting that freezing may be the best preservation method before bioactive compound extraction. Full article