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Keywords = uncatalyzed reaction

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17 pages, 4338 KiB  
Article
Self-Thickening Materials Derived from Phenylpropanoid Ene Reactions
by Atanu Biswas, Huai N. Cheng, Bret Chisholm, Ryan Beni, Zengshe Liu, Karl Vermillion, Michael Appell, Kelton Forson, Omar El Seoud, Carlucio R. Alves and Roselayne F. Furtado
Molecules 2025, 30(5), 977; https://doi.org/10.3390/molecules30050977 - 20 Feb 2025
Viewed by 658
Abstract
In this work, we report the observation of uncatalyzed ene reactions between several phenylpropanoid compounds and diethyl azodicarboxylate (DEAD). For allylbenzene, the reaction produces the ene product at molar ratios of up to 1:2 of allylbenzene to DEAD. At higher levels of DEAD, [...] Read more.
In this work, we report the observation of uncatalyzed ene reactions between several phenylpropanoid compounds and diethyl azodicarboxylate (DEAD). For allylbenzene, the reaction produces the ene product at molar ratios of up to 1:2 of allylbenzene to DEAD. At higher levels of DEAD, more complex reactions are observed. For the reaction between methyl eugenol and DEAD, similar ene reaction products have been found. However, the reaction of eugenol with DEAD is more complex; in addition to the ene reaction, other reactions happen at the same time. Most of the structures of the resulting products have been elucidated using NMR spectroscopy (1H, 13C, and 2D), and the findings have been further corroborated by FTIR analysis. Interestingly, these products appear to undergo molecular aggregation, which results in self-thickening in their neat form. However, the viscosity significantly decreases upon dilution with a solvent. This self-thickening property suggests their potential use as thickening agents in organic solvent formulations. Full article
(This article belongs to the Special Issue π-Conjugated Functional Molecules & Polymers)
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17 pages, 4313 KiB  
Article
Catalysis of Silver and Bismuth in Various Epoxy Resins
by Hayun Jeong and Keon-Soo Jang
Polymers 2024, 16(3), 439; https://doi.org/10.3390/polym16030439 - 5 Feb 2024
Cited by 2 | Viewed by 2656
Abstract
Epoxy resins find extensive utility across diverse applications owing to their exceptional adhesion capabilities and robust mechanical and thermal characteristics. However, the demanding reaction conditions, including extended reaction times and elevated reaction temperature requirements, pose significant challenges when using epoxy resins, particularly in [...] Read more.
Epoxy resins find extensive utility across diverse applications owing to their exceptional adhesion capabilities and robust mechanical and thermal characteristics. However, the demanding reaction conditions, including extended reaction times and elevated reaction temperature requirements, pose significant challenges when using epoxy resins, particularly in advanced applications seeking superior material properties. To surmount these limitations, the conventional approach involves incorporating organic catalysts. Within the ambit of this investigation, we explored the catalytic potential of metallic powders, specifically bismuth (Bi) and silver (Ag), in epoxy resins laden with various curing agents, such as diacids, anhydrides, and amines. Metallic powders exhibited efficacious catalytic activity in epoxy–diacid and epoxy–anhydride systems. In contrast, their influence on epoxy–amine systems was rendered negligible, attributed to the absence of requisite carboxylate functional groups. Additionally, the catalytic performance of Bi and Ag are different, with Bi displaying superior efficiency owing to the presence of inherent metal oxide layers on its powder surfaces. Remarkably, the thermal and mechanical properties of uncatalyzed, fully cured epoxy resins closely paralleled those of their catalyzed counterparts. These findings accentuate the potential of Bi and Ag metal catalysts, particularly in epoxy–diacid and epoxy–anhydride systems, spanning a spectrum of epoxy-based applications. In summary, this investigation elucidates the catalytic capabilities of Bi and Ag metal powders, underscoring their ability to enhance the curing rate of epoxy resin systems involving diacids and anhydrides but not amines. This research points toward a promising trajectory for multifarious epoxy-related applications. Full article
(This article belongs to the Special Issue Advanced Epoxy-Based Materials IV)
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12 pages, 1547 KiB  
Article
Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation
by Costas Tsioptsias
Molecules 2023, 28(23), 7902; https://doi.org/10.3390/molecules28237902 - 1 Dec 2023
Cited by 2 | Viewed by 2048
Abstract
The primary physicochemical effect upon exposure to infrared radiation (IR) is the temperature increase of cells. The degradation of proteins via the hydrolysis of peptide bonds is related to cell malfunction. In this work, the degradation of proteins/peptides under the influence of IR [...] Read more.
The primary physicochemical effect upon exposure to infrared radiation (IR) is the temperature increase of cells. The degradation of proteins via the hydrolysis of peptide bonds is related to cell malfunction. In this work, the degradation of proteins/peptides under the influence of IR radiation is theoretically studied. It is shown that the low value of enthalpy of peptide bond hydrolysis has two consequences: (a) the enthalpy of hydrolysis is sensitive to small variations in the bond strength, and the hydrolysis of weak peptide bonds is exothermic, while the hydrolysis of stronger bonds is endothermic; (b) the increase in temperature (e.g., due to IR exposure) changes the enthalpy of the reaction of some weak peptide bonds from exothermic to endothermic (that is, their hydrolysis will be favored upon further increase in temperature). Simple calculations reveal that the amount of absorbed energy during the overtone and hot band transitions of the H–O–H and C–N stretching vibrations is comparable to the activation energy of the (uncatalyzed) hydrolysis. A critical discussion is provided regarding the influence of different IR wavelengths on peptide bond hydrolysis. Full article
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9 pages, 627 KiB  
Article
Biomimetic Carbon Sequestration and Cyanate Detoxification Using Heat-Purified Carbonic Anhydrase from Sulfurihydrogenibium yellowstonense
by Chia-Jung Hsieh, Chia-Jung Hu and Chi-Yang Yu
Biomimetics 2023, 8(4), 365; https://doi.org/10.3390/biomimetics8040365 - 14 Aug 2023
Cited by 3 | Viewed by 2147
Abstract
The reaction condition for purifying carbonic anhydrase from Sulfurihydrogenibium yellowstonense (SspCA) by direct heating without prior cell lysis was optimized; heating at 70 °C for 5 min resulted in the highest total activity of 23,460 WAU (Wilbur–Anderson unit) from a 50 mL culture. [...] Read more.
The reaction condition for purifying carbonic anhydrase from Sulfurihydrogenibium yellowstonense (SspCA) by direct heating without prior cell lysis was optimized; heating at 70 °C for 5 min resulted in the highest total activity of 23,460 WAU (Wilbur–Anderson unit) from a 50 mL culture. Heat-purified SspCA was examined for its capability to increase the rate of the mineralization of CO2; compared with an uncatalyzed control, the onset time of CaCO3 formation was shortened by up to 71%. Cyanase can be used to degrade toxic cyanate; however, one of the limitations of this biomimetic process is that the reaction needs HCO3 as a substrate. Heat-purified SspCA was combined with heat-purified cyanase from Thermomyces lanuginosus to alleviate the HCO3 dependence; in industrial wastewater, the HCO3 required was reduced by 50% when 0.75 WAU of SspCA was added. Heat-purified SspCA is stable at 4 °C; 88% of the initial activity was retained for up to five weeks. Partially purified SspCA can be obtained with ease and applied to a variety of applications. Full article
(This article belongs to the Section Biomimetic Processing and Molecular Biomimetics)
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25 pages, 3853 KiB  
Article
Unravelling the Mechanism and Governing Factors in Lewis Acid and Non-Covalent Diels–Alder Catalysis: Different Perspectives
by Lise Vermeersch, Frank De Proft, Vicky Faulkner and Freija De Vleeschouwer
Int. J. Mol. Sci. 2023, 24(5), 4938; https://doi.org/10.3390/ijms24054938 - 3 Mar 2023
Cited by 1 | Viewed by 2956
Abstract
In the current literature, many non-covalent interaction (NCI) donors have been proposed that can potentially catalyze Diels-Alder (DA) reactions. In this study, a detailed analysis of the governing factors in Lewis acid and non-covalent catalysis of three types of DA reactions was carried [...] Read more.
In the current literature, many non-covalent interaction (NCI) donors have been proposed that can potentially catalyze Diels-Alder (DA) reactions. In this study, a detailed analysis of the governing factors in Lewis acid and non-covalent catalysis of three types of DA reactions was carried out, for which we selected a set of hydrogen-, halogen-, chalcogen-, and pnictogen-bond donors. We found that the more stable the NCI donor–dienophile complex, the larger the reduction in DA activation energy. We also showed that for active catalysts, a significant part of the stabilization was caused by orbital interactions, though electrostatic interactions dominated. Traditionally, DA catalysis was attributed to improved orbital interactions between the diene and dienophile. Recently, Vermeeren and co-workers applied the activation strain model (ASM) of reactivity, combined with the Ziegler-Rauk-type energy decomposition analysis (EDA), to catalyzed DA reactions in which energy contributions for the uncatalyzed and catalyzed reaction were compared at a consistent geometry. They concluded that reduced Pauli repulsion energy, and not enhanced orbital interaction energy, was responsible for the catalysis. However, when the degree of asynchronicity of the reaction is altered to a large extent, as is the case for our studied hetero-DA reactions, the ASM should be employed with caution. We therefore proposed an alternative and complementary approach, in which EDA values for the catalyzed transition-state geometry, with the catalyst present or deleted, can be compared one to one, directly measuring the effect of the catalyst on the physical factors governing the DA catalysis. We discovered that enhanced orbital interactions are often the main driver for catalysis and that Pauli repulsion plays a varying role. Full article
(This article belongs to the Special Issue Recent Advances in Hydrogen Bonding)
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12 pages, 3580 KiB  
Communication
Mechanistic DFT Study of 1,3-Dipolar Cycloadditions of Azides with Guanidine
by Ivana Antol, Zoran Glasovac and Davor Margetić
Molecules 2023, 28(5), 2342; https://doi.org/10.3390/molecules28052342 - 3 Mar 2023
Cited by 3 | Viewed by 2266
Abstract
Density functional calculations SMD(chloroform)//B3LYP/6-311+G(2d,p) were employed in the computational study of 1,3-dipolar cycloadditions of azides with guanidine. The formation of two regioisomeric tetrazoles and their rearrangement to cyclic aziridines and open-chain guanidine products were modeled. The results suggest the feasibility of an uncatalyzed [...] Read more.
Density functional calculations SMD(chloroform)//B3LYP/6-311+G(2d,p) were employed in the computational study of 1,3-dipolar cycloadditions of azides with guanidine. The formation of two regioisomeric tetrazoles and their rearrangement to cyclic aziridines and open-chain guanidine products were modeled. The results suggest the feasibility of an uncatalyzed reaction under very drastic conditions since the thermodynamically preferred reaction path (a), which involves cycloaddition by binding the carbon atom from guanidine to the terminal azide nitrogen atom, and the guanidine imino nitrogen with the inner N atom from the azide, has an energy barrier higher than 50 kcal mol−1. The formation of the other regioisomeric tetrazole (imino nitrogen interacts with terminal N atom of azide) in direction (b) can be more favorable and proceed under milder conditions if alternative activation of the nitrogen molecule releases (e.g., photochemical activation), or deamination could be achieved because these processes have the highest barrier in the less favorable (b) branch of the mechanism. The introduction of substituents should favorably affect the cycloaddition reactivity of the azides, with the greatest effects expected for the benzyl and perfluorophenyl groups. Full article
(This article belongs to the Special Issue Computational and Theoretical Studies on Isomeric Organic Compounds)
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11 pages, 2621 KiB  
Communication
Catalyst-Free Formal Conjugate Addition/Aldol or Mannich Multicomponent Reactions of Mixed Aliphatic Organozinc Reagents, π-Electrophiles and Michael Acceptors
by Marine Pinaud, Marc Presset and Erwan Le Gall
Molecules 2023, 28(3), 1401; https://doi.org/10.3390/molecules28031401 - 1 Feb 2023
Cited by 1 | Viewed by 2151
Abstract
Catalyst-free multicomponent reactions of mixed alkylzinc reagents with Michael acceptors and aldehydes, ketones or activated imines are described. Primary, secondary and tertiary alkylzinc reagents, pre-generated in acetonitrile from the corresponding iodoalkanes, were used in the process, leading to the very efficient formation of [...] Read more.
Catalyst-free multicomponent reactions of mixed alkylzinc reagents with Michael acceptors and aldehydes, ketones or activated imines are described. Primary, secondary and tertiary alkylzinc reagents, pre-generated in acetonitrile from the corresponding iodoalkanes, were used in the process, leading to the very efficient formation of a variety of β-hydroxycarbonyl compounds. The imines showed more contrasting results, due to the direct addition of the organozinc compound to the C=N bond. Mechanistic assays involving TEMPO account for a polar instead of a radical character of the reaction. Full article
(This article belongs to the Special Issue Multicomponent Reactions in Organic Synthesis)
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12 pages, 4784 KiB  
Article
Theoretical and Experimental Insights of Benzimidazole Catalyzed by the Epoxy–Acrylic Acid Reaction
by Muhammad Jawwad Saif, Fazal-ur-Rehman, Shazia Abrar, Arruje Hameed, Nazeran Idrees and Muhammad Asif
Molecules 2022, 27(22), 7900; https://doi.org/10.3390/molecules27227900 - 15 Nov 2022
Cited by 4 | Viewed by 2965
Abstract
This study focuses on the experimental and molecular-level investigation of epoxy acrylate formation. Epoxy acrylate vinyl ester resin was prepared by a reaction of diglycidyl ether of bisphenol-A-based epoxy resin and acrylic acid, using benzimidazole as a catalyst. It was confirmed that benzimidazole [...] Read more.
This study focuses on the experimental and molecular-level investigation of epoxy acrylate formation. Epoxy acrylate vinyl ester resin was prepared by a reaction of diglycidyl ether of bisphenol-A-based epoxy resin and acrylic acid, using benzimidazole as a catalyst. It was confirmed that benzimidazole can effectively catalyze this reaction. FTIR analysis of the product revealed a simple addition esterification reaction between the epoxide group and carboxylic group of acrylic acid excluding the side reactions (e.g., etherification). DFT computational studies were performed to theoretically explore the insights of reaction mechanisms. The calculations revealed that the benzimidazole-catalyzed reaction dominates the uncatalyzed reaction. A comparison of calculated activation energies showed that concerted mechanisms are less significant in such reactions owing to their high activation barriers. Full article
(This article belongs to the Special Issue Epoxy Resin Synthesis, Performance and Application Research)
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17 pages, 4528 KiB  
Article
Nickel and Cobalt Ilmenites-Based Catalysts for Upgrading Pyrolytic Oil during Pyrolysis of Waste Tires
by Daniela Correa-Muriel, Hoover Valencia-Sánchez, Héctor Cortes-Hernández, Daniela González-Vera, Javiera Herrera, Cristian H. Campos, Mónica L. Casella, Luis E. Arteaga-Perez and Paula Osorio-Vargas
Catalysts 2022, 12(11), 1437; https://doi.org/10.3390/catal12111437 - 15 Nov 2022
Cited by 5 | Viewed by 3083
Abstract
Pyrolysis as a waste treatment method has gained relevance because it can generate higher value-added products in addition to reducing the environment’s secondary pollution. In this study, the catalytic pyrolysis of waste tires was evaluated using NiTiO3 and CoTiO3 ilmenites as [...] Read more.
Pyrolysis as a waste treatment method has gained relevance because it can generate higher value-added products in addition to reducing the environment’s secondary pollution. In this study, the catalytic pyrolysis of waste tires was evaluated using NiTiO3 and CoTiO3 ilmenites as catalysts and precursors of metal catalysts with the aim to produce an oil enriched in high-value hydrocarbons, such as benzene, toluene, a xylenes mixture, and products less-reported, such as p-cymene and p-cymenene. The experiments were performed in an analytical pyrolyzer coupled to GC/MS. The effect of the nature of the catalysts on the product distribution was compared with the uncatalyzed reaction. The main products of uncatalyzed pyrolysis were D, L-limonene (~60%), and isoprene (~25%) due to the depolymerization of natural rubber. Meanwhile, Ni-ilmenites-based catalysts favored the formation of target compounds to expense D, L-limonene. Moreover, the presence of metal in reduced-ilmenite sharply enhanced the selectivity by ~50% concerning oxidized ilmenite and above 80% compared to the uncatalyzed reaction for p-cymene and p-cymenene. By contrast, the Co-ilmenites-based catalysts showed a marginal effect on secondary reactions. Finally, the feasibility of forming the aromatic terpenes, p-cymene, and p-cymenene from limonene in the non-catalytic pyrolysis was evaluated. Full article
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15 pages, 1850 KiB  
Article
Design and Development of a Catalytic Fixed-Bed Reactor for Gasification of Banana Biomass in Hydrogen Production
by Diego Tacuri, Christian Andrade, Paúl Álvarez, Mónica Abril-González, Silvana Zalamea, Verónica Pinos-Vélez, Lourdes Jara and Andres Montero-Izquierdo
Catalysts 2022, 12(4), 395; https://doi.org/10.3390/catal12040395 - 1 Apr 2022
Cited by 6 | Viewed by 5967
Abstract
Hydrogen produced from biomass is an alternative energy source to fossil fuels. In this study, hydrogen production by gasification of the banana plant is proposed. A fixed-bed catalytic reactor was designed considering fluidization conditions and a height/diameter ratio of 3/1. Experimentation was carried [...] Read more.
Hydrogen produced from biomass is an alternative energy source to fossil fuels. In this study, hydrogen production by gasification of the banana plant is proposed. A fixed-bed catalytic reactor was designed considering fluidization conditions and a height/diameter ratio of 3/1. Experimentation was carried out under the following conditions: 368 °C, atmospheric pressure, 11.75 g of residual mass of the banana (pseudo-stem), an average particle diameter of 1.84 mm, and superheated water vapor as a gasifying agent. Gasification reactions were performed using a catalyzed and uncatalyzed medium to compare the effectiveness of each case. The catalyst was Ni/Al2O3, synthesized by coprecipitation. The gas mixture produced from the reaction was continuously condensed to form a two-phase liquid–gas system. The synthesis gas was passed through a silica gel filter and analyzed online by gas chromatography. To conclude, the results of this study show production of 178 mg of synthesis gas for every 1 g of biomass and the selectivity of hydrogen to be 51.8 mol% when a Ni 2.5% w/w catalyst was used. The amount of CO2 was halved, and CO was reduced from 3.87% to 0% in molar percentage. Lastly, a simulation of the distribution of temperatures inside the furnace was developed; the modeled behavior is in agreement with experimental observations. Full article
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18 pages, 3029 KiB  
Article
New 1,2,3-Triazoles from (R)-Carvone: Synthesis, DFT Mechanistic Study and In Vitro Cytotoxic Evaluation
by Ali Oubella, Abdoullah Bimoussa, Abdellah N’ait Oussidi, Mourad Fawzi, Aziz Auhmani, Hamid Morjani, Abdelkhalek Riahi, M’hamed Esseffar, Carol Parish and Moulay Youssef Ait Itto
Molecules 2022, 27(3), 769; https://doi.org/10.3390/molecules27030769 - 25 Jan 2022
Cited by 32 | Viewed by 3946
Abstract
Aseries of novel 1,4-disubstituted 1,2,3-triazoles were synthesized from an (R)-carvone terminal alkyne derivative via a Cu (I)-catalyzed azide–alkyne cycloaddition reaction using CuSO4,5H2O as the copper (II) source and sodium ascorbate as a reducing agent which reduces Cu (II) into [...] Read more.
Aseries of novel 1,4-disubstituted 1,2,3-triazoles were synthesized from an (R)-carvone terminal alkyne derivative via a Cu (I)-catalyzed azide–alkyne cycloaddition reaction using CuSO4,5H2O as the copper (II) source and sodium ascorbate as a reducing agent which reduces Cu (II) into Cu (I). All the newly synthesized 1,2,3-triazoles 9ah were fully identified on the basis of their HRMS and NMR spectral data and then evaluated for their cell growth inhibition potential by MTS assay against HT-1080 fibrosarcoma, A-549 lung carcinoma, and two breast adenocarcinoma (MCF-7 and MDA-MB-231) cell lines. Compound 9d showed notable cytotoxic effects against the HT-1080 and MCF-7 cells with IC50 values of 25.77 and 27.89 µM, respectively, while compound 9c displayed significant activity against MCF-7 cells with an IC50 value of 25.03 µM. Density functional calculations at the B3LYP/6-31G* level of theory were used to confirm the high reactivity of the terminal alkyne as a dipolarophile. Quantum calculations were also used to investigate the mechanism of both the uncatalyzed and copper (I)-catalyzed azide–alkyne cycloaddition reaction (CuAAC). The catalyzed reaction gives complete regioselectivity via a stepwise mechanism streamlining experimental observations. The calculated free-energy barriers 4.33 kcal/mol and 29.35 kcal/mol for the 1,4- and 1,5-regioisomers, respectively, explain the marked regioselectivity of the CuAAC reaction. Full article
(This article belongs to the Special Issue Density Functional Theory in the Age of Chemical Intelligence)
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11 pages, 2432 KiB  
Article
Entrapment of the Fastest Known Carbonic Anhydrase with Biomimetic Silica and Its Application for CO2 Sequestration
by Chia-Jung Hsieh, Ju-Chuan Cheng, Chia-Jung Hu and Chi-Yang Yu
Polymers 2021, 13(15), 2452; https://doi.org/10.3390/polym13152452 - 26 Jul 2021
Cited by 19 | Viewed by 3106
Abstract
Capturing and storing CO2 is of prime importance. The rate of CO2 sequestration is often limited by the hydration of CO2, which can be greatly accelerated by using carbonic anhydrase (CA, EC 4.2.1.1) as a catalyst. In order to [...] Read more.
Capturing and storing CO2 is of prime importance. The rate of CO2 sequestration is often limited by the hydration of CO2, which can be greatly accelerated by using carbonic anhydrase (CA, EC 4.2.1.1) as a catalyst. In order to improve the stability and reusability of CA, a silica-condensing peptide (R5) was fused with the fastest known CA from Sulfurihydrogenibium azorense (SazCA) to form R5-SazCA; the fusion protein successfully performed in vitro silicification. The entrapment efficiency reached 100% and the silicified form (R5-SazCA-SP) showed a high activity recovery of 91%. The residual activity of R5-SazCA-SP was two-fold higher than that of the free form when stored at 25 °C for 35 days; R5-SazCA-SP still retained 86% of its activity after 10 cycles of reuse. Comparing with an uncatalyzed reaction, the time required for the onset of CaCO3 formation was shortened by 43% and 33% with the addition of R5-SazCA and R5-SazCA-SP, respectively. R5-SazCA-SP shows great potential as a robust and efficient biocatalyst for CO2 sequestration because of its high activity, high stability, and reusability. Full article
(This article belongs to the Special Issue Recombinant Protein Polymers)
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10 pages, 2439 KiB  
Article
Reduction of the Diazo Functionality of α-Diazocarbonyl Compounds into a Methylene Group by NH3BH3 or NaBH4 Catalyzed by Au Nanoparticles
by Marios Kidonakis and Manolis Stratakis
Nanomaterials 2021, 11(1), 248; https://doi.org/10.3390/nano11010248 - 18 Jan 2021
Cited by 3 | Viewed by 3199
Abstract
Supported Au nanoparticles on TiO2 (1 mol%) are capable of catalyzing the reduction of the carbene-like diazo functionality of α-diazocarbonyl compounds into a methylene group [C=(N2) → CH2] by NH3BH3 or NaBH4 in methanol [...] Read more.
Supported Au nanoparticles on TiO2 (1 mol%) are capable of catalyzing the reduction of the carbene-like diazo functionality of α-diazocarbonyl compounds into a methylene group [C=(N2) → CH2] by NH3BH3 or NaBH4 in methanol as solvent. The Au-catalyzed reduction that occurs within a few minutes at room temperature formally requires one hydride equivalent (B-H) and one proton that originates from the protic solvent. This pathway is in contrast to the Pt/CeO2-catalyzed reaction of α-diazocarbonyl compounds with NH3BH3 in methanol, which leads to the corresponding hydrazones instead. Under our stoichiometric Au-catalyzed reaction conditions, the ketone-type carbonyls remain intact, which is in contrast to the uncatalyzed conditions where they are selectively reduced by the boron hydride reagent. It is proposed that the transformation occurs via the formation of chemisorbed carbenes on Au nanoparticles, having proximally activated the boron hydride reagent. This protocol is the first general example of catalytic transfer hydrogenation of the carbene-like α -ketodiazo functionality. Full article
(This article belongs to the Special Issue Nano Au Materials for Catalysis of Organic Transformations)
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14 pages, 3819 KiB  
Article
Catalytic Performance of SBA-15-Supported Poly (Styrenesulfonic Acid) in the Esterification of Acetic Acid with n-Heptanol
by Abdulaziz Ali Alghamdi, Yahya Musawi Mrair, Fahad A. Alharthi and Abdel-Basit Al-Odayni
Appl. Sci. 2020, 10(17), 5835; https://doi.org/10.3390/app10175835 - 23 Aug 2020
Cited by 13 | Viewed by 3997
Abstract
A polystyrene sulfonic acid-functionalized mesoporous silica (SBA-15-PSSA) catalyst was synthesized via an established multistep route, employing 2-bromo-2-methylpropionyl bromide as initiator of atom transfer radical polymerization. Fourier-transform infrared spectroscopy, thermogravimetric/differential thermal, Brunauer–Emmett–Teller, and transmission electron microscopy analyses revealed outstanding structural characteristics of the catalyst, [...] Read more.
A polystyrene sulfonic acid-functionalized mesoporous silica (SBA-15-PSSA) catalyst was synthesized via an established multistep route, employing 2-bromo-2-methylpropionyl bromide as initiator of atom transfer radical polymerization. Fourier-transform infrared spectroscopy, thermogravimetric/differential thermal, Brunauer–Emmett–Teller, and transmission electron microscopy analyses revealed outstanding structural characteristics of the catalyst, including highly ordered mesopores, high surface area (726 m2/g), and adequate estimated concentrations of active sites (0.70 mmol H+/g). SBA-15-PSSA’s catalytic performance was evaluated in the esterification of acetic acid and n-heptanol as a model system at various temperatures (50–110 °C), catalyst loads (0.1–0.3 g), and reaction times (0–160 min). The conversion percentage of acetic acid was found to increase with the temperature, catalyst load, and reaction time. Furthermore, results indicated a fast conversion in the first 20 min of the reaction, with remarkable conversion values at 110 °C, reaching 86%, 94%, and 97% when the catalyst load was 0.1, 0.2, and 0.3 g, respectively; notably, at this temperature, 100% conversation was achieved after 60 min. At 110 °C, the reaction conducted in the presence of 0.3 g of catalyst displayed more than 6.4 times the efficiency of the uncatalyzed reaction. Such activity is explained by the concomitant presence in the polymer of strong sulfonic acid moieties and a relatively high hydrophobic surface, with adequate numbers of active sites for ester production. Full article
(This article belongs to the Section Chemical and Molecular Sciences)
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16 pages, 2237 KiB  
Article
Fine-Tuning of Sequence Specificity by Near Attack Conformations in Enzyme-Catalyzed Peptide Hydrolysis
by S. Kashif Sadiq
Catalysts 2020, 10(6), 684; https://doi.org/10.3390/catal10060684 - 18 Jun 2020
Cited by 4 | Viewed by 3735
Abstract
The catalytic role of near attack conformations (NACs), molecular states that lie on the pathway between the ground state (GS) and transition state (TS) of a chemical reaction, is not understood completely. Using a computational approach that combines Bürgi–Dunitz theory with all-atom molecular [...] Read more.
The catalytic role of near attack conformations (NACs), molecular states that lie on the pathway between the ground state (GS) and transition state (TS) of a chemical reaction, is not understood completely. Using a computational approach that combines Bürgi–Dunitz theory with all-atom molecular dynamics simulations, the role of NACs in catalyzing the first stages of HIV-1 protease peptide hydrolysis was previously investigated using a substrate that represents the recognized SP1-NC cleavage site of the HIV-1 Gag polyprotein. NACs were found to confer no catalytic effect over the uncatalyzed reaction there ( Δ Δ G N 0 kcal/mol). Here, using the same approach, the role of NACs across multiple substrates that each represent a further recognized cleavage site is investigated. Overall rate enhancement varies by | Δ Δ G | 12–15 kcal/mol across this set, and although NACs contribute a small and approximately constant barrier to the uncatalyzed reaction (< Δ G N u > = 4.3 ± 0.3 kcal/mol), they are found to contribute little significant catalytic effect ( | Δ Δ G N | 0–2 kcal/mol). Furthermore, no correlation is exhibited between NAC contributions and the overall energy barrier ( R 2 = 0.01). However, these small differences in catalyzed NAC contributions enable rates to match those required for the kinetic order of processing. Therefore, NACs may offer an alternative and subtle mode compared to non-NAC contributions for fine-tuning reaction rates during complex evolutionary sequence selection processes—in this case across cleavable polyproteins whose constituents exhibit multiple functions during the virus life-cycle. Full article
(This article belongs to the Special Issue Quantum Chemical Modelling of Enzymatic Reactions)
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