Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation
Abstract
:1. Introduction
2. Theory/Calculations
- (1)
- How does the enthalpy of the hydrolysis reaction change with temperature, and is the hydrolysis reaction favored or not by the increase in temperature?
- (2)
- Can IR radiation provide enough energy to molecules to surpass the activation energy of the hydrolysis reaction?
2.1. Enthalpy of Reaction and Its Variation with Temperature
- : Enthalpy of reaction.
- : Sum of the dissociation energies of the broken bonds.
- : Sum of the dissociation energies of the formed bonds.
- : The stretching frequency in cm−1.
- : The dissociation energy of the bond in Kcal/mol.
- : Constant characteristic of the bond, e.g., 26.7 Kcal/mol for a carbon–nitrogen bond.
- and : Two frequencies of stretching vibration of the same bond in cm−1 corresponding to bonds of different energy and .
- : The difference of the two frequencies () in cm−1.
- : The difference in the bond energy () in Kcal/mol.
- : The difference in the bond energy () in KJ/mol.
- : The standard enthalpy of reaction at 298 K (25 °C). This value was calculated multiple times from Equation (1) using the average bond strength literature values and by varying by ±10% the average bond strength of the C–N bond.
- : The enthalpy of reaction at temperature T.
- : The difference in the molar heat capacities of the products and the reactants (by considering the stoichiometry of the reaction).
2.2. Aspects Related to Activation Energy
- : Number of molecules in the upper energy state.
- : Number of molecules in the lower energy state.
- : The difference in energy of the two states ().
- : Absolute temperature.
- : Boltzmann’s constant.
3. Results and Discussion
4. Further Discussion
5. Conclusions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
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Tsioptsias, C. Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation. Molecules 2023, 28, 7902. https://doi.org/10.3390/molecules28237902
Tsioptsias C. Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation. Molecules. 2023; 28(23):7902. https://doi.org/10.3390/molecules28237902
Chicago/Turabian StyleTsioptsias, Costas. 2023. "Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation" Molecules 28, no. 23: 7902. https://doi.org/10.3390/molecules28237902
APA StyleTsioptsias, C. (2023). Thermodynamic and Vibrational Aspects of Peptide Bond Hydrolysis and Their Potential Relationship to the Harmfulness of Infrared Radiation. Molecules, 28(23), 7902. https://doi.org/10.3390/molecules28237902