Search Results (25)

Background/Objectives: Increasing levels of antimicrobial resistance (AMR) have recently been observed at the human–domestic animal–wildlife interface. Wild birds have been identified as carriers of antimicrobial-resistant bacteria and serve as excellent biomarkers for epidemiological studies. This study assessed the current AMR presence in Eastern Spain’s commensal Escherichia coli isolated from free-ranging Bonelli’s eagles (Aquila fasciata). Methods: Nestlings and their nests were intensively sampled between 2022 and 2024 to determine their AMR profile and characterize E. coli. AMR testing was conducted using the broth microdilution method, following the European Committee on Antimicrobial Susceptibility Testing guidelines. Additionally, the presence of eaeA (intimin gene) and stx-1 and stx-2 (shiga toxins) was analyzed by real-time PCR to classify E. coli strains into enteropathogenic (EPEC) and Shiga-toxigenic (STEC) pathotypes. Results: Of all E. coli isolates, 41.7% were resistant to at least one antimicrobial, and 30% were multidrug-resistant. Only two strains were classified as EPEC and none as STEC. The highest resistance rates were observed for amoxicillin and tetracycline (19.6% each). Alarmingly, resistance to colistin and meropenem, last-resort antibiotics in human medicine, was also detected. Conclusions: Although the mechanisms of resistance acquisition remain unclear, transmission is likely to occur through the food chain, with synanthropic prey acting as intermediary vectors. These results highlight the role of Bonelli’s eagles as essential sentinels of environmental AMR dissemination, even in remote ecosystems. Strengthening One Health-based surveillance is necessary to address AMR’s ecological and public health risks in wildlife. Full article

For the first time, the numerous scattered data on birds (wild and domestic) have been collected based on their medieval bone remains discovered on the modern territory of the Republic of Bulgaria. The collected information is about a total of 37 medieval settlements from the time of the First and Second Bulgarian Empires. Among the settlements studied are both the two medieval Bulgarian capitals (Pliska and Veliki Preslav), as well as other cities, smaller settlements, military fortresses, monasteries, and inhabited caves. The data refer to a total of 48 species of wild birds and 6 forms of domestic birds of 11 avian orders: Accipitriformes, Anseriformes, Ciconiiformes, Columbiformes, Falconiformes, Galliformes, Gruiformes, Otidiformes, Passeriformes, Pelecaniformes, and Strigiformes. The established composition of wild birds amounts to over one tenth (to 11.5%) of the modern avifauna in the country. Five of the established species (10.4%) have disappeared from the modern nesting avifauna of the country—the bearded vulture, the great bustard, the little bustard, the gray crane, and the saker falcon (the latter two species have reappeared as nesters in the past few years). First Bulgarian Empire (681–1018): Investigated settlements—22. Period covered—five centuries (7th to 11th c.). Found in total: at least 44 species/forms of birds, of which 39 species of wild birds and 5 forms of poultry. Second Bulgarian Empire (1185–1396): Investigated settlements—15. Period covered—3 centuries (12th to 14th c.). Found in total: at least 39 species/forms of birds, of which 33 species of wild birds and 6 forms of poultry. The groups of raptors, water, woodland, openland, synanthropic and domestic birds were analyzed separately. The conclusion was made that during the two periods of the Middle Ages, birds had an important role in the material and spiritual life of the population of the Bulgarian lands. Birds were mainly used for food (domestic birds), although some were objects of hunting. No traces of processing were found on the bones. Birds were subjects of works of applied and monumental art. Their images decorated jewelry, tableware, walls of buildings and other structures. Full article

Bats serve as key ecological reservoirs of diverse microbial communities, including emerging viruses and antibiotic resistance genes. This study investigates the intestinal microbiota of two insectivorous bat species, Nyctalus noctula and Vespertilio murinus, at the Rostov Bat Rehabilitation Center in Southern Russia using whole metagenome shotgun sequencing. We analyzed taxonomic composition, functional pathways, antibiotic resistance genes, and virulence factors. Densoviruses, especially those closely related to Parus major densovirus, were the most dominant viral sequences identified. Metagenome-assembled densovirus genomes showed high sequence similarity with structural variations and clustered phylogenomically with viruses from mealworms and birds, reflecting both dietary origins and the potential for vertebrate infection. Functional profiling revealed microbial pathways associated with cell wall biosynthesis, energy metabolism, and biofilm formation. A total of 510 antibiotic resistance genes, representing 142 unique types, mainly efflux pumps and β-lactamases, were identified. Additionally, 870 virulence factor genes were detected, with a conserved set of iron acquisition systems and stress response regulators across all samples. These findings highlight the ecological complexity of bat-associated microbiota and viromes and suggest that synanthropic bats may contribute to the circulation of insect-associated viruses and antimicrobial resistance in urban settings. Full article

Highly pathogenic avian influenza (HPAI) is a highly contagious disease of domestic, synanthropic, and wild birds that has demonstrated a sharp rise globally since 2020. This study intends to examine environmental and demographic factors most significantly associated with HPAI (H5N1 and H5N8) outbreaks in Kazakhstan, 2020–2024, and to identify areas of potential underreporting of the disease. Two ecological niche models were developed, namely an “occurrence model” (considering climatic and environmental factors influencing the likelihood of HPAI occurrence) and a “reporting model” (that assesses the probability of disease reporting based on human and poultry population demography). Both models were trained using outbreak locations in countries neighboring Kazakhstan (Afghanistan, China, Hong Kong, Iran, Iraq, Pakistan and Russia), and then tested using the HPAI outbreak locations in Kazakhstan. Results suggested a good fit for both models to Kazakhstani outbreaks (test AUC = 0.894 vs. training AUC = 0.915 for “occurrence model”, and test AUC = 0.869 vs. training AUC = 0.872 for “reporting model”). A cluster of high occurrence-to-reporting ratio was detected in the south-western region of Kazakhstan, close to the Caspian Sea, suggesting a need for enhancing surveillance efforts in this zone as well as in some other areas of Pavlodar, Northern Kazakhstan, Western Kazakhstan, Qyzylorda, and Eastern Kazakhstan. Results presented here will help inform the design and implementation of control strategies for HPAI in Kazakhstan with the ultimate goal of promoting disease prevention and control in the country. Full article

Urbanization replaces natural vegetation for city expansion, impacting environmental and climatic variables that affect the health of the human population and fauna. These changes affect important groups such as birds, given their greater sensitivity to anthropogenic alterations, especially when we understand these effects on a large scale, considering countries such as Brazil, which represents the third country with the greatest diversity of bird species in the world. Conversely, green spaces like urban parks, tree-lined avenues, and riparian forests seem to foster biodiversity conservation. Here, we analyze the effects of vegetation on bird communities and bird–plant interactions in urban riparian areas that have undergone ecological restoration. The study was carried out between January and October 2019 in two restored urban areas of Uberlândia, Brazil. Results showed that the richness of birds observed between the two areas was Praia Clube (n = 86) and Parque Linear Rio Uberabinha (n = 80). The most representative trophic guilds in the areas, with the highest proportion in their relative abundances during both seasons, were granivores, omnivores, insectivores, and frugivores. Composition varied significantly between areas as a function of the plant community, particularly when considering the interaction between season and area (ANOSIM: R = 0.19; Stress = 0.10; p = 0.008). In environments dominated by generalist and synanthropic species (Eared Dove, Picazuro Pigeon), effective planning and management of green areas are crucial. It is important to acknowledge that certain bird species depend on specific habitats, such as riparian forests, and that specific plant species within these areas are vital for specialized bird species, such as species endemic to the Brazilian Savanna or Cerrado and restricted to Brazil (White-striped Warbler) and species in vulnerable categories globally (Bare-faced Curassow). Therefore, restoration efforts in degraded areas should be carefully planned to restore interactions and conserve biodiversity effectively. Full article

Seagulls are synanthropic wild birds that can contaminate, through their droppings, beaches, urban and peri-urban environments. This concern is more serious when seagulls eliminate antimicrobial-resistant pathogenic bacteria. This study analyzed the fecal samples from 137 yellow-legged seagulls (Larus michahellis) from Central Italy. A total of 218 Escherichia coli strains were isolated and analyzed for phenotypic and genotypic antimicrobial resistance and to identify the virulence genes characterizing different pathotypes. The disk diffusion method on all isolates found relevant resistance rates to ampicillin (38.99%), tetracycline (23.85%), and enrofloxacin (21.10%). On the basis of all results obtained with this test, 62 (28.44%) isolates were classified as multidrug-resistant (MDR) and 6 (2.75%) as extensive drug-resistant (XDR). Molecular analyses conducted on the strains phenotypically resistant to carbapenems, cephalosporins, and penicillins found 9/37 (24.32%) strains positive for bla_OXA-48, 52/103 (50.49%) for bla_TEM, 12/103 (11.65%) for bla_CMY2, 3/103 (2.91%) for bla_CTX, and 1/103 (0.97%,) for bla_SHV. PCR to detect virulence genes characterizing different pathotypes found that 40 (18.35%) isolates had the astA gene, indicative of the enteroaggregative (EAEC) pathotype, 2 (0.92%) had cnf1, 2 (0.92%) had cnf2, and 1 (0.46%) had cdt-IV. All five (2.29%) strains were reportable as necrotoxigenic (NTEC), while 4 (1.83%) had both eaeA and escV, reportable as enteropathogenic (EPEC). Measures to limit seagulls’ access where humans and other animals reside are pivotal to reduce the risk of infection with antimicrobial-resistant and pathogenetic E. coli strains. Full article

Synanthropic wild rodents associated with agricultural operations may represent a risk path for transmission of high pathogenicity avian influenza viruses (HPAIVs) from wild birds to poultry birds. However, their susceptibility to HPAIVs remains unclear. In the present study, house mice (Mus musculus), brown rats (Rattus norvegicus), and black rats (Rattus rattus) were experimentally exposed to H5N1 subtype HPAIVs to evaluate their vulnerability to infection. After intranasal inoculation with HA clade 2.2 and 2.3.2.1 H5N1 subtype HPAIVs, wild rodents did not show any clinical signs and survived for 10- and 12-day observation periods. Viruses were isolated from oral swabs for several days after inoculation, while little or no virus was detected in their feces or rectal swabs. In euthanized animals at 3 days post-inoculation, HPAIVs were primarily detected in respiratory tract tissues such as the nasal turbinates, trachea, and lungs. Serum HI antibodies were detected in HA clade 2.2 HPAIV-inoculated rodents. These results strongly suggest that synanthropic wild rodents are susceptible to infection of avian-origin H5N1 subtype HPAIVs and contribute to the virus ecosystem as replication-competent hosts. Detection of infectious viruses in oral swabs indicates that wild rodents exposed to HPAIVs could contaminate food, water, and the environment in poultry houses and play roles in the introduction and spread of HPAIVs in farms. Full article

Nowadays, trace metal contamination within urban atmospheres is a significant and concerning global issue. In the present study, two synanthropic bird species, namely, the feral pigeon (Columba livia f. domestica) and the rook (Corvus frugilegus), were employed as bioindicators to assess the atmospheric trace metal pollution in Iasi City, Romania. The concentrations of Ni, Pb, Cd, Co, Cr, and Cu were determined through high-resolution continuum source graphite furnace atomic absorption spectrometry (HR-CS GF-AAS) of various tissues, including the liver, kidney, lung, heart, muscle, and bone, of feral pigeons and rooks collected in Iasi City. The order of trace metal concentrations in the tissues of feral pigeons and rooks in Iasi City was similar: Cu > Pb > Ni > Cd > Cr > Co. However, trace element values in most tissues were higher in the rook samples than in feral pigeon ones, except for Co, which had elevated levels in feral pigeon renal and cardiac tissues, and Cu, which registered the highest concentrations in feral pigeon liver and kidney tissues. While not statistically significant, Pb concentration values in the PM₁₀ fraction of atmospheric particles positively correlated with Pb concentrations in rook kidney samples (p = 0.05). The concentration levels of Cd, Pb, and Ni in the PM₁₀ fraction of air particles showed a positive correlation with Cd levels in the samples of pigeon heart and rook liver, kidney, and heart, Pb levels in the samples of pigeon kidney, heart, and muscle and rook liver and bone, and Ni levels in the samples of pigeon liver, kidney, and bone and rook liver, muscle, and bone, respectively. Full article

Synanthropic birds might play an important role as reservoirs of many zoonotic endoparasites; however, little information is available on many parasites and their prevalence. Here, we use an approach based on targeted metagenomic detection through the use of DNA metabarcoding of faecal samples to screen for circulating parasites in alien parakeets (Myiopsitta monachus and Psittacula krameri) and urban landfill-feeding storks (Ciconia ciconia) and gulls (Larus fuscus). We focus especially on potentially zoonotic parasites, with the aim of better understanding the zoonotic risk that these birds’ faeces may pose. We detected a total of 23 genera of eukaryotic parasites: six fungi, three protists, five nematodes, two cestodes and seven trematodes. Among them, six stood out for their relevance to human health: Cryptococcus spp., Aspergillus spp. and Candida spp. (fungi); Cryptosporidium spp. (a protist); and Ascaris spp. and Halicephalobus spp. (nematodes). In parakeets, we detected Cryptococcus spp. and Ascaris spp., the latter being detected in 10–20% of the samples. In the White Stork and the Lesser Black-backed Gull, we found a high prevalence of Aspergillus spp. (in 15% and 50% of the samples, respectively) and Candida spp. (in 63% and 82% of the samples, respectively), and the presence of Cryptosporidium spp. in 10% of the samples. We detected Halicephalobus spp. in one gull sample (2%). Our results show that synanthropic birds may act as vectors and reservoirs of zoonotic parasites and their faeces could pose a risk to human health associated with the zoonotic parasites present in them. This should be taken into account when developing management plans for urban populations of these bird species. Full article

Coronaviruses have a major impact on human and animal health. The SARS-CoV-2, a beta coronavirus responsible for the COVID-19 pandemic, is a clear example. It continues circulating and causes human deaths, and its high replication rate results in numerous variants. Coronaviruses adapt to birds and mammals and constitute a serious threat, and new viruses are likely to emerge. Urban pigeons (Columbiformes) are synanthropic birds of great interest from a ‘One Health’ perspective, due to their interaction with humans and other animals. Aware that they may act as viral reservoirs and contribute to their spread, we aimed to investigate the possible presence of SARS-CoV-2 and other coronaviruses in Columbiformes in the city of Logroño, Spain. Oropharyngeal and cloacal swabs were tested using real-time (N1 and E genes from SARS-CoV-2) and conventional PCR assays (RdRp gene from all coronaviruses). SARS-CoV-2 was not detected. A total of 13.3% of pigeons harbored coronaviruses closely related to Gamma coronavirus (Igacovirus) from Columbiformes in Finland, Poland and China. Monitoring the emergence of a new variant of SARS-CoV-2 capable of infecting Columbiformes should continue. SARS-CoV-2 is still circulating, the viral RNA of this virus has been detected in avian species (Phasianidae and Anatidae), and other coronaviruses are associated with animals that are in close contact with humans. The presence of Gamma coronavirus in urban pigeons must be considered for the risk of surveillance of human infections. Full article

Captive birds of prey are often used for pest control in urban areas, while also participating in falconry exhibitions. Traveling across the country, these birds may represent a public health concern as they can host pathogenic and zoonotic agents and share the same environment as humans and synanthropic species. In this work, Escherichia coli from the cloacal samples of 27 captive birds of prey were characterized to determine their pathogenic potential. Isolates were clustered through ERIC-PCR fingerprinting, and the phylogenetic groups were assessed using a quadruplex PCR method. Their virulence and resistance profile against nine antibiotics were determined, as well as the isolates’ ability to produce extended-spectrum β-lactamases (ESBLs). The 84 original isolates were grouped into 33 clonal types, and it was observed that more than half of the studied isolates belonged to groups D and B2. Most isolates presented gelatinase activity (88%), almost half were able to produce biofilm (45%), and some were able to produce α-hemolysin (18%). The isolates presented high resistance rates towards piperacillin (42%), tetracycline (33%), and doxycycline (30%), and 6% of the isolates were able to produce ESBLs. The results confirm the importance of these birds as reservoirs of virulence and resistance determinants that can be disseminated between wildlife and humans, stressing the need for more studies focusing on these animals. Full article

Falconry has been practiced for thousands of years and is nowadays frequently employed in activities such as pest control, hunting, falcon racing, and environmental education. Antimicrobial resistance levels have risen in the past years, constituting an emerging global problem with a direct impact on public health. Besides both topics being studied on their own, information on the role of captive birds of prey in the potential dissemination of virulence factors and antimicrobial resistance determinants of bacterial origin is scarce. Multidrug-resistant bacteria, including some extended-spectrum β-lactamase producers, have already been found in several captive birds of prey. Most of the virulence factors found in captive raptors’ bacteria were related to adherence and invasion abilities, toxin production, and flagella. These birds may acquire these bacteria through contaminated raw food and the exchange of animals between keepers and zoological facilities. More studies are required to confirm the role of captive birds of prey in disseminating resistant bacteria and on the routes of interaction between synanthropic species and humans. Full article

Salmonella is one of the most common and pathogenic bacteria worldwide, causing severe enteritis in humans and representing a relevant intestinal illness in One Health for young, old and immunosuppressed patients. Various Salmonella serovars have been described to be responsible for human Salmonellosis. Birds represent natural carriers of different zoonotic-relevant Salmonella serovars and Anseriformes can not only transmit Salmonella spp. to humans but also manifest clinical Salmonellosis. In this study, 138 scat samples (n = 138) of free-ranging Egyptian geese (EG; Alopochen aegyptiaca) were collected in Germany, including 83 scat samples from city parks, 30 samples from 14 public swimming pools and 25 fresh caecal samples of dead EG. Collected EG scat samples were examined for the presence of Salmonella spp. according either to the ISO 6579 (2017) norm or to a combination of bacterial pre-enrichment and specific PCR for detection of Salmonella DNA. All 138 analysed EG faecal samples resulted Salmonella-negative. Furthermore, the survival of Salmonella enterica subsp. enterica Serovar Anatum in spiked EG droppings was tested in four different concentrations of chlorinated pool water. In vitro testing demonstrated that S. Anatum-spiked EG droppings were still infectious for up to six hours in chlorinated pool water according to current German regulations for public swimming pools. This study is to be considered as a baseline investigation to clarify the role of synanthropic EG as natural carriers of zoonotic Salmonella in cities; nonetheless, large-scale epidemiological studies, including higher numbers of samples as well as more urban locations, are needed for final conclusions on the occurrence of this intestinal bacteria in neozootic EG. Full article

This overview of extant Siphonaptera lists 19 families with major hosts and their general distribution, estimated numbers of genera, species, and subspecies, with a brief taxonomic and phylogenetic review. With around 10 new species described annually, extant flea fauna comprises an estimated 249 genera, 2215 species, and 714 subspecies globally, mostly mammal parasites, but 5% of species are on birds. Host specificity varies from euryxenous (i.e., infesting two or more host orders) (e.g., cat fleas, Ctenocephalides felis felis) to monoxenous (e.g., rabbit fleas, Spilopsyllus cuniculi). The largest family is the paraphyletic Hystrichopsyllidae, making up a third of all flea species. The largest monophyletic family, Ceratophyllidae (rodent and bird fleas), comprises another 20% and has dispersed to every continent, including Antarctica. Fleas descend from scorpionflies (Mecoptera), possibly snow scorpionflies (Boreidae) or Nannochoristidae, and even giant fossils found from the Mesozoic could be Siphonaptera. The diversification of fleas shows evidence of taxon cycles. “Relict” families, such as helmet fleas (Stephanocircidae), have a disjunct distribution reflecting the breakup of Gondwanaland 70 million years ago. “Niche specialists” include nest fleas (Anomiopsyllus), bat fleas (Ischnopsyllidae), and burrowing fleas, such as chigoes (Tungidae). By contrast, Ceratophyllidae fleas could be considered “great speciators”. Cat fleas and several other synanthropic flea species are invasive “supertramps”. Although those species are intensively studied, many flea species and their hosts require urgent surveys and conservation. Full article

A major driver of the declining biodiversity is landcover change leading to loss of habitat. Many studies have estimated large-scale declines in biodiversity, but loss of biodiversity at a local scale due to the immediate effects of development has been poorly studied. California, in particular, is a biodiversity hotspot and has rapidly developed; thus, it is important to understand the effects of development on wildlife in the State. Here, we conducted reconnaissance surveys—a type of survey often used by consulting biologists in support of environmental review of proposed projects—to measure changes in the relative abundance and richness of vertebrate species in response to urban development. We completed 2 reconnaissance surveys at each of 52 control sites that remained undeveloped at the times of both surveys, and at each of 26 impact sites that had been developed by the time of the second survey. We completed the surveys as part of a before–after, control–impact (BACI) experimental design. Our main interest was the interaction effect between the before–after phases and the control–impact treatment levels, or the impact of development. After controlling for survey duration, we also tested for the effects of the number of years intervening the surveys in the before and after phases, project area size, latitude, degree of connectedness to adjacent open space, and whether the site was a redevelopment site, infill, or not infill. After development, the average number of vertebrate wildlife species we detected declined by 48% within the project area, and by 66% within the bounds of the project sites. Further, the average number of vertebrate animals we counted declined by 90% within the project area, and 89% within the bounds of the project sites. Development impacts measured by the mean number of species detected per survey were greatest for amphibians (−100%), followed by mammals (−86%), grassland birds (−75%), raptors (−53%), special-status species (−49%), all birds as a group (−48%), non-native birds (−44%), and synanthropic birds (−28%). Our results indicated that urban development substantially reduced vertebrate species richness and numerical abundance, even after richness and abundance had likely already been depleted by the cumulative effects of loss, fragmentation, and degradation of habitat in the urbanizing environment. Monitoring is needed in and around urbanizing areas to measure the cumulative effects of urbanization, and so are conservation measures to mitigate the effects of urbanization. Full article