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13 pages, 275 KB  
Article
Accelerating Propagation Induced by Slowly Decaying Initial Data for Nonlocal Reaction-Diffusion Equations in Cylinder Domains
by Ru Hou and Yu Lu
Axioms 2025, 14(12), 925; https://doi.org/10.3390/axioms14120925 - 16 Dec 2025
Abstract
This paper investigates the phenomenon of accelerating propagation for nonlocal reaction-diffusion models with spatial and trait structure in a cylinder domain R×Ω. Unlike previous studies focusing on exponentially decaying or compactly supported initial data, we consider initial functions that decay [...] Read more.
This paper investigates the phenomenon of accelerating propagation for nonlocal reaction-diffusion models with spatial and trait structure in a cylinder domain R×Ω. Unlike previous studies focusing on exponentially decaying or compactly supported initial data, we consider initial functions that decay more slowly than any exponential function—such as algebraic or sub-exponential decay. By constructing a pair of super- and sub-solutions via the principal eigenfunction ψ0 of the trait operator, we prove that the solution propagates with infinitely increasing speed in the spatial direction. Explicit upper and lower bounds for the locations of level sets are derived, illustrating how the decay rate of the initial data determines the acceleration profile. The results are extended to a more general model with space- and trait-dependent competition kernels under a boundedness assumption (H3). This work highlights the crucial role of slowly decaying tails in the initial distribution in driving accelerated invasion fronts, providing a theoretical foundation for assessing propagation risks in ecology and population dynamics. Full article
4 pages, 168 KB  
Commentary
Current Antibiotic Susceptibility Test Underestimates Minority Resistance: Implications for High-Risk Infections
by Ivan Brukner and Matthew Oughton
LabMed 2025, 2(4), 26; https://doi.org/10.3390/labmed2040026 - 16 Dec 2025
Abstract
Antibiotic susceptibility testing (AST) reports classify isolates as “susceptible” despite potential undetected resistant subpopulations—a phenomenon termed susceptibility heterogeneity (SH). Found in 15–97% of clinical isolates of Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa, and Klebsiella pneumoniae, SH arises from heteroresistance [...] Read more.
Antibiotic susceptibility testing (AST) reports classify isolates as “susceptible” despite potential undetected resistant subpopulations—a phenomenon termed susceptibility heterogeneity (SH). Found in 15–97% of clinical isolates of Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa, and Klebsiella pneumoniae, SH arises from heteroresistance or polyclonal diversity and may evade standard low-inoculum protocols. Clinically, this can lead to treatment failure, particularly in high-risk cases including immunocompromised patients, bloodstream infections, transplant recipients, and situations where minor resistant subpopulations significantly affect outcome. We argue that ethical principles of non-maleficence, transparency, and equity now compel laboratories to acknowledge this limitation. A simple annotation—“Limited susceptibility possible; resistant subpopulations may not be detected”—should accompany “susceptible” results in immunocompromised patients. High-risk cases warrant enhanced testing. This commentary calls for zone inspection, staff training, and Clinical and Laboratory Standards Institute (CLSI)/European Committee on Antimicrobial Susceptibility Testing (EUCAST) guideline updates to reflect SH. Transparency enhances clinical decision-making without implying diagnostic fault. Full article
18 pages, 720 KB  
Article
Genetic Characterization of the Arabian Horse Population in Tunisia Using Microsatellites
by Mariem Jlassi, Iheb Dhifalli, Hatem Ouled Ahmed, Faten Lasfar, Mohamed El Gtari and Bayrem Jemmali
Life 2025, 15(12), 1925; https://doi.org/10.3390/life15121925 - 16 Dec 2025
Abstract
The genetic diversity and population structure of Tunisian Arabian horses were assessed using highly polymorphic microsatellite markers, which are critical for conservation and breeding programs. Despite the cultural and economic importance of Arabian horses in Tunisia, molecular data supporting their management remain limited. [...] Read more.
The genetic diversity and population structure of Tunisian Arabian horses were assessed using highly polymorphic microsatellite markers, which are critical for conservation and breeding programs. Despite the cultural and economic importance of Arabian horses in Tunisia, molecular data supporting their management remain limited. In this study, DNA from 130 horses was genotyped with 17 ISAG-FAO-recommended microsatellites to evaluate diversity within Eastern and Western Arabian lineages and their relationship to Thoroughbreds. Eastern Arabians showed an average of 5.176 alleles per locus, observed heterozygosity of 0.657, expected heterozygosity of 0.677, and a fixation index of 0.028, while Western Arabians displayed 5.941 alleles, heterozygosity values of 0.689 (Ho) and 0.688 (He), and a fixation index of −0.006. Genetic differentiation was low between Eastern and Western Arabians (0.011) but moderate between Eastern Arabians and Thoroughbreds (0.071), with high gene flow within Arabian subpopulations (0.950). Principal component analysis confirmed distinct subpopulations. These findings highlight high genetic diversity in Western Arabians and variable heterozygosity in Eastern Arabians, providing a molecular basis for targeted breeding strategies to preserve genetic traits, control inbreeding, and ensure the long-term sustainability of Tunisian Arabian horse populations. Full article
(This article belongs to the Section Animal Science)
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32 pages, 3747 KB  
Article
Interplay Between Dysregulated Immune System and the Footprints of Blood-Borne miRNAs in Treatment Naive Crohn’s Disease and Ulcerative Colitis Patients
by Emese Szilagyi-Tolnai, Anna Anita Szilagyi-Racz, Orsolya Kadenczki, Andras Balajthy, Peter David, Gabor Fidler, Peter Fauszt, Kristof Gal, Judit Remenyik, Karoly Palatka, Gyorgy Panyi, Melinda Paholcsek and Gabor Tajti
Int. J. Mol. Sci. 2025, 26(24), 12042; https://doi.org/10.3390/ijms262412042 - 15 Dec 2025
Abstract
Dysregulated T-cell-mediated immune responses are a hallmark of inflammatory bowel diseases (IBD), including Crohn’s disease (CD) and ulcerative colitis (UC). MicroRNAs (miRNAs) regulate various biological processes and play a significant role in the pathophysiology of numerous diseases. In this study, we aim to [...] Read more.
Dysregulated T-cell-mediated immune responses are a hallmark of inflammatory bowel diseases (IBD), including Crohn’s disease (CD) and ulcerative colitis (UC). MicroRNAs (miRNAs) regulate various biological processes and play a significant role in the pathophysiology of numerous diseases. In this study, we aim to clarify the relationship between dysregulated immune response and altered miRNA signatures in patients with IBD. Our goal is to identify differentially expressed miRNAs that could potentially serve as diagnostic markers to differentiate between CD and UC. To quantify circulating miRNAs, we employed small RNA sequencing. To describe immune dysregulation, we determined the levels of circulating T-cell-related cytokines and the distribution of T-cell subpopulations in both circulation and in tissue samples. Our analysis revealed that 14 miRNAs exhibited significant expression differences between IBD patients and control subjects. These miRNAs may also implicate pathways associated with colitis-related colorectal carcinogenesis, suggesting their value in early risk assessment. Furthermore, we found that five miRNAs demonstrated a strong ability to discriminate between CD and UC patients. Additionally, levels of IL-22 and IFN-γ were significantly elevated in individuals with IBD. Notably, miRNA levels showed strong correlations with cytokine levels and T-cell subset distribution in both blood and tissue samples, exhibiting disease-specific patterns. In conclusion, we identified differentially expressed miRNAs in IBD patient groups, and a subset of these miRNAs might exhibit diagnostic potential to distinguish between CD and UC. Analyzing miRNAs in the blood of IBD patients may provide valuable insights into the underlying immune dysfunction. Full article
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13 pages, 3762 KB  
Article
Patterns in Population Dynamics of the Nun Moth (Lymantria monacha L.) Based on Long-Term Studies in North-West Poland
by Axel Schwerk, Izabela Dymitryszyn, Agata Jojczyk, Marek Kondras, Katarzyna Szyszko-Podgórska and Jan Szyszko
Forests 2025, 16(12), 1852; https://doi.org/10.3390/f16121852 - 13 Dec 2025
Viewed by 130
Abstract
Threats to forest ecosystems from pest insects are supposed to become more severe due to climate change. Therefore, understanding the dynamics of forest pest insects and the mechanisms of their outbreaks is going to be of even greater importance. To understand these phenomena [...] Read more.
Threats to forest ecosystems from pest insects are supposed to become more severe due to climate change. Therefore, understanding the dynamics of forest pest insects and the mechanisms of their outbreaks is going to be of even greater importance. To understand these phenomena and cope with the consequences, the question of which patterns show meta-populations of pest insects before and after outbreaks is of high interest. Therefore, long-term studies have been carried out in two research areas in North-West Poland with the aim of studying the fluctuations of meta-populations of the Nun moth (Lymantria monacha L.) (Lepidoptera: Erebidae) using pheromone traps. Synchronization of the fluctuations at the individual study plots was tested for correlations with the numbers of the Nun moth per trap, changes in the numbers of the Nun moth per trap, and the growth factors. The studied Nun moth meta-populations showed a certain pattern in fluctuations of their sub-populations (interaction groups) with phases of asynchronous and synchronous fluctuations; the latter seem to be important when it comes to distinctive peaks in Nun moth numbers in the meta-populations. We conclude that predicting population dynamics of the Nun moth demands long-term studies, including research on both density-dependent factors and stochastic processes. Full article
(This article belongs to the Section Forest Health)
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27 pages, 3126 KB  
Article
User-Oriented Sustainable Renewal of Peri-Urban Heritage Towns: A Case Study of Nanquan Street, Wuxi, China
by Tengfei Yu, Yi Chen, Shuling Li and Zhanchuan Chen
Sustainability 2025, 17(24), 11168; https://doi.org/10.3390/su172411168 - 12 Dec 2025
Viewed by 153
Abstract
Public spaces in peri-urban towns are becoming key focal points of urban regeneration in China due to their geographic advantages, resource endowments, and diverse populations. Substantial investments have been made to improve residents’ living environments and well-being. As over-commercialized urban centers increasingly face [...] Read more.
Public spaces in peri-urban towns are becoming key focal points of urban regeneration in China due to their geographic advantages, resource endowments, and diverse populations. Substantial investments have been made to improve residents’ living environments and well-being. As over-commercialized urban centers increasingly face congestion and homogenization, the distinctive landscapes and authentic everyday life of peri-urban towns are attracting growing attention from tourists. Understanding both residents’ and visitors’ perceptions of these public spaces is therefore essential for successful regeneration. This study examines Nanquan Street, which lies ina peri-urban heritage town in Wuxi, Jiangnan region, China. Drawing on user-generated content from major Chinese social media platforms (Xiaohongshu and Dianping) and field observations guided by the AEIOU framework, a three-stage grounded theory approach was employed to identify the key factors influencing user satisfaction. The analysis identified twelve sub-dimensions grouped into three overarching categories: foundational preconditions, social developmental factors, and spatial-operational factors, which collectively shape sustained satisfaction in Peri-urban heritage towns. By translating the satisfaction model into sustainable design strategies, this study proposes a set of renewal pathways applicable not only to Nanquan Street but also to similar peri-urban towns facing comparable challenges. Emphasizing multi-user experience, low-intervention strategies, and contextual adaptability, this research contributes to theoretical understandings of sustainable renewal in peri-urban towns. It provides actionable guidance for balancing everyday life, cultural heritage, and sustainable tourism development. Full article
(This article belongs to the Special Issue Sustainable Heritage Tourism)
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25 pages, 718 KB  
Review
Measuring Supermassive Black Hole Masses with H2O Megamasers: Observations, Methods, and Implications for Black Hole Demographics
by Cheng-Yu Kuo
Universe 2025, 11(12), 415; https://doi.org/10.3390/universe11120415 - 12 Dec 2025
Viewed by 71
Abstract
Measuring supermassive black hole (SMBH) masses is fundamental to understanding active galactic nuclei (AGN) and their coevolution with host galaxies. Among existing techniques, H2O megamaser observations with Very Long Baseline Interferometry (VLBI) provide the most direct and geometric determinations of SMBH [...] Read more.
Measuring supermassive black hole (SMBH) masses is fundamental to understanding active galactic nuclei (AGN) and their coevolution with host galaxies. Among existing techniques, H2O megamaser observations with Very Long Baseline Interferometry (VLBI) provide the most direct and geometric determinations of SMBH masses by tracing molecular gas in sub-parsec Keplerian disks. Over the past two decades, the Megamaser Cosmology Project (MCP) has surveyed thousands of nearby AGNs and obtained high-sensitivity VLBI maps of dozens of maser disks that lead to accurate SMBH masses with uncertainties typically below 10%. In this paper, we present a comprehensive review that summarizes the essential elements required to obtain accurate black hole masses with the H2O megamaser technique—including the physical conditions for maser excitation, observational requirements, disk modeling, and sources of SMBH mass uncertainty—and we discuss the implications of maser-based measurements for exploring SMBH demographics. In particular, we will show that maser-derived black hole masses, largely free from the systematic biases of stellar or gas-dynamical methods, provide critical anchors at the low-mass end of the SMBH population (MBH∼107M), and reveal possible deviations from the canonical MBHσ relation. With forthcoming spectroscopic surveys and advances in millimeter/submillimeter VLBI, the maser technique promises to extend precise dynamical mass measurements to both larger local samples and high-redshift galaxies. Full article
(This article belongs to the Special Issue Supermassive Black Hole Mass Measurements)
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28 pages, 2482 KB  
Article
Research on the Flexible Job Shop Scheduling Problem with Job Priorities Considering Transportation Time and Setup Time
by Chuchu Zheng and Zhiqiang Xie
Axioms 2025, 14(12), 914; https://doi.org/10.3390/axioms14120914 - 12 Dec 2025
Viewed by 93
Abstract
This paper addresses the flexible job-shop scheduling problem with multiple time factors—namely, transportation time and setup time—as well as job priorities (referred to as FJSP-JPC-TST). An optimization model is established with the objective of minimizing the completion time. Considering the characteristics of the [...] Read more.
This paper addresses the flexible job-shop scheduling problem with multiple time factors—namely, transportation time and setup time—as well as job priorities (referred to as FJSP-JPC-TST). An optimization model is established with the objective of minimizing the completion time. Considering the characteristics of the FJSP-JPC-TST, we propose an improved whale optimization algorithm that incorporates multiple strategies. First, a two-layer encoding mechanism based on operations and machines is introduced. To prevent illegal solutions, a priority-based encoding repair mechanism is designed, along with an active scheduling decoding method that fully considers multiple time factors and job priorities. Subsequently, a multi-level sub-population optimization strategy, an adaptive inertia weight, and a cross-population differential evolution strategy are implemented to enhance the optimization efficiency of the algorithm. Finally, extensive simulation experiments demonstrate that the proposed algorithm offers significant advantages and exhibits high reliability in effectively solving such scheduling problems. Full article
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7 pages, 622 KB  
Commentary
Ending the TB Crisis in Low- and Middle-Income Countries of the Eastern Mediterranean Region—Overcoming Inaction Through Strategical Leaps
by Santosha Kelamane, Ghada Muhjazi, Nevin Wilson and Martin van den Boom
Trop. Med. Infect. Dis. 2025, 10(12), 348; https://doi.org/10.3390/tropicalmed10120348 - 12 Dec 2025
Viewed by 146
Abstract
Tuberculosis (TB) remains a public health threat in low- and middle-income countries (LMICs) of the World Health Organization (WHO) Eastern Mediterranean Region (EMR), driven by a combination of social determinants including undernutrition, fragile health systems, conflict-related disruptions, human mobility and displacement, sub-optimal programmatic [...] Read more.
Tuberculosis (TB) remains a public health threat in low- and middle-income countries (LMICs) of the World Health Organization (WHO) Eastern Mediterranean Region (EMR), driven by a combination of social determinants including undernutrition, fragile health systems, conflict-related disruptions, human mobility and displacement, sub-optimal programmatic implementation, and insufficient domestic investment. These programmatic and governance constraints operate within a broader geopolitical context marked by conflict, sanctions, protracted crises, and large-scale displacement, which further limit countries’ ability to deliver uninterrupted TB services. In 2023, the region’s TB incidence was estimated at 116 per 100,000 population, with Pakistan alone accounting for about 73% of the regional burden. Despite a multitude of efforts, progress in reducing the TB burden in the EMR remains slow, with high case detection and treatment coverage gaps, low uptake of TB preventive treatment (TPT), underutilization of WHO-recommended rapid diagnostics, and only 25% of drug-resistant TB (DR-TB) cases initiated on treatment. Vulnerable populations, including internally displaced persons, migrants, refugees, prisoners, and returnees, continue to face major access barriers, and cross-border TB collaboration remains limited. This commentary reasons that the slow pace of TB burden reduction in the region is not only a biomedical or resource issue but also a reflection of structural and governance shortcomings. It proposes a ten-point strategic vision focused on building a sustainable ecosystem, enhancing primary healthcare systems, adopting people-centered and rights-based approaches, leveraging artificial intelligence, and gradually reducing dependency on external donors where feasible. However, in highly fragile settings such as Yemen or Somalia, domestic financing remains limited, and sustained external support will continue to be indispensable. The commentary calls for stronger national leadership, inclusive stakeholder engagement, and increased domestic financing to deliver integrated and resilient TB services. Ending TB in the EMR is within reach, but it requires boldly committed, coordinated, and country-led action. Full article
(This article belongs to the Special Issue Tuberculosis Control in Africa and Asia)
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20 pages, 1573 KB  
Article
Determinants of Entero-Invasive and Non-Entero-Invasive Diarrheagenic Bacteria Among HIV-Positive and HIV-Negative Adults in Ghana
by Hagen Frickmann, Fred Stephen Sarfo, Betty Roberta Norman, Albert Dompreh, Shadrack Osei Asibey, Richard Boateng, Veronica Di Cristanziano, Tafese Beyene Tufa, Ulrike Loderstädt, Ramona Binder, Andreas Erich Zautner, Tom Luedde, Torsten Feldt and Kirsten Alexandra Eberhardt
Med. Sci. 2025, 13(4), 316; https://doi.org/10.3390/medsci13040316 - 12 Dec 2025
Viewed by 170
Abstract
Objectives: This observational and cross-sectional study investigated differential associations between entero-invasive and non-entero-invasive enteric pathogens and HIV infection, considering socioeconomic, clinical and immunological aspects. In a Ghanaian population with a high prevalence of enteric pathogens, stool samples from people living with HIV (PLWH) [...] Read more.
Objectives: This observational and cross-sectional study investigated differential associations between entero-invasive and non-entero-invasive enteric pathogens and HIV infection, considering socioeconomic, clinical and immunological aspects. In a Ghanaian population with a high prevalence of enteric pathogens, stool samples from people living with HIV (PLWH) were screened for Salmonella spp., Shigella spp./EIEC (enteroinvasive Escherichia coli), and Campylobacter jejuni as entero-invasive bacteria, for enteropathogenic E. coli (EPEC), enterotoxigenic E. coli (ETEC), and enteroaggregative E. coli (EAEC) as non-entero-invasive bacteria. Arcobacter butzleri, with uncertain enteropathogenicity, was also included. Methods: Stool samples from PLWH (with and without antiretroviral therapy) and HIV-negative controls were analyzed by real-time PCR for the presence and quantity of the selected enteropathogens. Results were correlated with socioeconomic, clinical, and immunological parameters. Results: The presence of Shigella spp. /EIEC in stool was both qualitatively and quantitatively associated with reduced CD4+ T lymphocyte counts and was qualitatively associated with clinically apparent diarrhea. EAEC showed a weak positive association with HIV infection, supported by a negative correlation between EAEC DNA quantity and CD4+ T lymphocyte counts. EPEC colonization was associated with HIV negativity, higher CD4+ T lymphocyte counts, and lower socioeconomic status. Abundance of Salmonella enterica was associated with clinically apparent diarrhea. Conclusions: This explorative, hypothesis-forming study suggests species- or pathovar-specific associations between enteric bacterial pathogens and HIV-related immunosuppression. Observed relationships with clinically apparent diarrhea largely align with findings from sub-Saharan African children, except for a more pronounced association between diarrhea and Salmonella in this cohort. Full article
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18 pages, 295 KB  
Review
Choroidal and Retinal Permeability Changes in Chronic Kidney Disease—A Literature Review
by Giacomo De Rosa, Francesco Paolo De Rosa, Giovanni Ottonelli and Mario R. Romano
J. Clin. Med. 2025, 14(24), 8767; https://doi.org/10.3390/jcm14248767 - 11 Dec 2025
Viewed by 126
Abstract
Purpose: This review consolidates current evidence on how chronic kidney disease (CKD)-especially end-stage kidney disease (ESKD) and its treatments-alters choroidal and retinal vascular permeability, leading to changes in intraocular fluid homeostasis. Methods: A literature search of Medical Literature Analysis and Retrieval [...] Read more.
Purpose: This review consolidates current evidence on how chronic kidney disease (CKD)-especially end-stage kidney disease (ESKD) and its treatments-alters choroidal and retinal vascular permeability, leading to changes in intraocular fluid homeostasis. Methods: A literature search of Medical Literature Analysis and Retrieval System Online (MEDLINE), reference lists, and key ophthalmology-nephrology texts was performed for studies published between 1980 and 2025. One-hundred-forty-four articles (clinical trials, observational cohorts, and case reports) met the inclusion criteria. Data were abstracted on choroidal thickness changes, blood-retinal barrier integrity, incidence of Central Serous Chororioretinopathy (CSCR) and Serous Retinal Detachment (SRD) in dialysis and transplant populations, and systemic variables such as oncotic pressure, hypertension, and corticosteroid exposure, with special attention to retinal pigment epithelium (RPE) pump function. Findings were synthesized qualitatively and tabulated where appropriate. Results: ESKD induces a triad of lowered plasma oncotic pressure, fluctuating hydrostatic forces, and impaired RPE pump function that collectively drive subretinal fluid accumulation. Hemodialysis acutely reduces sub-foveal choroidal thickness by a mean of ≈15–25 µm yet shows inconsistent effects on retinal thickness. Large population data demonstrate a three- to four-fold higher SRD risk and ~1.5-fold higher CSCR risk in dialysis patients versus controls, with peritoneal dialysis conferring the greatest hazard. After kidney transplantation, CSCR prevalence approaches 6%, driven by combined stresses of surgery, hypertension, and long-term corticosteroid or calcineurin-inhibitor therapy. Most reported SRDs resolve as systemic parameters normalize, underscoring the importance of promptly identifying systemic drivers. Conclusions: Systemic fluid-pressure imbalances and treatment-related factors in CKD significantly perturb the outer blood-retinal barrier. Regular ophthalmic surveillance, early visual-symptom screening (e.g., Amsler grid), and close nephrologist-ophthalmologist collaboration are essential for timely detection and management. Future research should quantify the relative contribution of hypoalbuminemia, hypertension, and immunosuppression to ocular permeability changes, and evaluate preventive strategies tailored to high-risk CKD subgroups. Full article
(This article belongs to the Section Nephrology & Urology)
14 pages, 3279 KB  
Article
Triaenophorus nodulosus (Cestoda: Bothriocephalidea) in Northern Pike (Esox lucius) and Pumpkinseed (Lepomis gibbosus) from the Mrežnica River: Pathological Effects of Adult Tapeworms and Intestinal Immune Response
by Emil Gjurčević, Valerija Benko, Krešimir Matanović, Petra Bandelj, Alessio Alesci, Fabio Marino, Snježana Kužir, Laura Duka and Jessica Maria Abbate
Fishes 2025, 10(12), 640; https://doi.org/10.3390/fishes10120640 - 11 Dec 2025
Viewed by 97
Abstract
Populations of northern pike (Esox lucius) and pumpkinseed (Lepomis gibbosus) from the Mrežnica River were found to be infected with the tapeworm Triaenophorus nodulosus. In both species, the mean intensity of infection was low, suggesting a well-balanced host–parasite [...] Read more.
Populations of northern pike (Esox lucius) and pumpkinseed (Lepomis gibbosus) from the Mrežnica River were found to be infected with the tapeworm Triaenophorus nodulosus. In both species, the mean intensity of infection was low, suggesting a well-balanced host–parasite relationship. This study investigates pathological changes caused by adult T. nodulosus in its definitive host, the northern pike, and the associated intestinal immune response. The infection had no detectable adverse effects on either the northern pike population or the host’s body condition index. Histological examination revealed lesions both at the site of tapeworm attachment and in areas adjacent to the free strobila, involving the lamina propria and submucosa. A moderate, multifocal, ulcerative, and necrotizing enteritis was observed, accompanied by an increased number of mast cells (MCs), which were identified as the predominant immune cells involved in the E. luciusT. nodulosus interaction. MCs, mostly degranulated, were found in the lamina propria and superficial submucosa at the attachment site. Immunofluorescence revealed a subpopulation of piscidin 1-positive MCs in the same layers, with a higher number at the attachment site compared to unaffected intestinal areas. This represents the first evidence of piscidin 1 involvement in intestinal host defence against cestode infections in teleosts. Full article
(This article belongs to the Section Fish Pathology and Parasitology)
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12 pages, 872 KB  
Review
The Crossroads of Cancer Regulation: Discussing the Role of Non-Coding RNAs in Bladder Cancer Stem Cells
by Alexandros Georgiou, Dimitrios Triantis, Maria Goulielmaki and Vassilis Zoumpourlis
Uro 2025, 5(4), 22; https://doi.org/10.3390/uro5040022 - 11 Dec 2025
Viewed by 110
Abstract
Despite substantial progress in the field of bladder cancer management, the disease continues to represent an important health issue characterized by increased recurrence and progression rates. This is largely attributed to cancer stem cells (CSCs), a unique cell subpopulation capable of self-renewal, differentiation [...] Read more.
Despite substantial progress in the field of bladder cancer management, the disease continues to represent an important health issue characterized by increased recurrence and progression rates. This is largely attributed to cancer stem cells (CSCs), a unique cell subpopulation capable of self-renewal, differentiation and resistance to conventional anti-cancer therapies. At the same time, our understanding of cancer biology has been revolutionized by the identification of non-coding RNAs (ncRNAs), a heterogeneous group of RNA molecules that do not translate into proteins yet function as pivotal regulators of gene expression. Emerging evidence demonstrates that ncRNAs modulate key hallmarks of CSCs, including self-renewal, epithelial–mesenchymal transition and drug resistance. This review investigates the intricate interplay between ncRNAs and the core signaling pathways that underlie bladder CSC biology. Unravelling the nexus between CSCs and ncRNAs is crucial for developing novel diagnostic biomarkers, better prognostic tools and innovative therapeutic strategies for patients with bladder cancer. Full article
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19 pages, 3633 KB  
Article
Single-Cell Mapping of Genetic Risk Across Ten Respiratory Diseases
by Miao Zhou and Chao Xue
Biology 2025, 14(12), 1765; https://doi.org/10.3390/biology14121765 - 10 Dec 2025
Viewed by 239
Abstract
Understanding how genetic risk variants contribute to respiratory diseases requires mapping genome-wide association study (GWAS) signals to disease-relevant cell types and states within the human lung. Here, we integrated GWAS summary statistics for ten major respiratory diseases, including asthma, COPD, idiopathic pulmonary fibrosis [...] Read more.
Understanding how genetic risk variants contribute to respiratory diseases requires mapping genome-wide association study (GWAS) signals to disease-relevant cell types and states within the human lung. Here, we integrated GWAS summary statistics for ten major respiratory diseases, including asthma, COPD, idiopathic pulmonary fibrosis (IPF), COVID-19, and lung cancer, using a large-scale single-cell transcriptomic dataset of more than 523,000 cells from the Human Lung Cell Atlas. Applying the single-cell Disease Relevance Score (scDRS) framework, we systematically identified shared and disease-specific cellular associations across four major compartments, namely epithelial, immune, endothelial, and stromal. We found that alveolar type II (AT2) cells represent a central susceptibility hub for asthma, COPD, and COVID-19, whereas disease-specific risk enrichment was observed in subpopulations such as CCL3+ alveolar macrophages in COVID-19 and adventitial fibroblasts in asthma. Importantly, subclustering revealed substantial heterogeneity within cell types, with distinct transcriptional programs underlying differential disease associations. For example, AT2 subclusters exhibited divergent susceptibility patterns to asthma versus COVID-19, reflecting immune-interacting versus antiviral states. Our results provide a systematic single-cell framework for linking genetic risk to the cellular architecture of the human lung and uncover both shared and disease-specific mechanisms underlying respiratory disease susceptibility. Full article
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21 pages, 1228 KB  
Review
Single-Cell Sequencing Unravels Pancreatic Cancer: Novel Technologies Reveal Novel Aspects of Cellular Heterogeneity and Inform Therapeutic Strategies
by Keran Chen, Zeyu Chen, Jinai Wang, Mo Zhou, Yun Liu, Bin Xu, Zhi Yu, Yiming Li, Guanhu Yang and Tiancheng Xu
Biomedicines 2025, 13(12), 3024; https://doi.org/10.3390/biomedicines13123024 - 10 Dec 2025
Viewed by 621
Abstract
Single-cell sequencing (scRNA-seq) has emerged as a pivotal technology for deciphering the complex cellular heterogeneity and tumor microenvironment (TME) of pancreatic ductal adenocarcinoma (PDAC), positioning it as a critical tool for informing novel therapeutic strategies. This review explores how scRNA-seq reveals diverse cellular [...] Read more.
Single-cell sequencing (scRNA-seq) has emerged as a pivotal technology for deciphering the complex cellular heterogeneity and tumor microenvironment (TME) of pancreatic ductal adenocarcinoma (PDAC), positioning it as a critical tool for informing novel therapeutic strategies. This review explores how scRNA-seq reveals diverse cellular subpopulations and their functional roles within the PDAC TME, including malignant epithelial cells with transitional phenotypes, heterogeneous cancer-associated fibroblasts (CAFs), functionally distinct immune cells such as tumor-associated neutrophils (TANs) and macrophages (TAMs), and actively participating neural components like Schwann cells. These cellular constituents form specialized functional units that drive tumor progression, immune evasion, neural invasion, and therapy resistance through metabolic reprogramming, immunosuppressive signaling, and cellular plasticity. The review further examines technological advances in single-cell sequencing from 2023 to 2025, focusing on sample preprocessing innovations, multi-omics integration (combining transcriptomics with epigenomics and proteomics), spatial resolution enhancements, and customized computational tools that address PDAC-specific challenges. Clinically, single-cell sequencing enables precise cellular subtyping, identification of novel biomarkers, and development of personalized therapeutic approaches, including combination therapies targeting specific cellular subpopulations and their interactions. Despite these advances, significant challenges remain in standardizing clinical applications such as liquid biopsy for early detection and tumor microenvironment assessment for diagnostic staging, validating biomarkers like CLIC4, GAS2L1, Cytokeratins, Vimentin and N-cadherin in circulating tumor cells, and comprehensively integrating multi-omics data. Future research focusing on both technology refinement and biological validation will be essential for translating single-cell insights into improved diagnostic and therapeutic outcomes for pancreatic cancer. Full article
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