Search Results (813)

The normal metabolism of transient starch in leaves plays a vital role in determining photosynthesis and final crop yield. However, the molecular mechanisms linking abnormal transient starch metabolism to premature leaf senescence remain unclear. Here, we isolate a rice mutant, lses1, with leaf yellowing and premature senescence, as well as excessive accumulation of starch granules in chloroplasts. Genetic analysis revealed that this trait is controlled by a single recessive nuclear gene. Through BSA-seq preliminary gene mapping, map-based cloning, and sequencing alignment, the candidate gene was pinpointed to LOC_Os02g40860 on chromosome 2, which encodes OsCKI1, a casein kinase I family member. The identity of LSES1 was confirmed functionally: genetic complementation with the native genomic sequence rescued the wild-type phenotype, while CRISPR/Cas9 knockout of the gene in wild-type plants recapitulated the premature senescence. This confirmed that LSES1/OsCKI1 is involved in the regulation of leaf senescence. Notably, one improved knockout line, KO-2, displayed significant agronomic improvements in grain length, grain width, number of productive ears, and number of filled grains per panicle, along with a significant increase in grain yield per plant, highlighting its potential breeding value. Subcellular localization and tissue-specific expression analysis showed that LSES1 is primarily nuclear-localized and constitutively expressed. Full article

Nitrogen fertilization is essential for balancing maize yield, grain composition, and environmental sustainability. This study aimed to evaluate the relationship between nitrogen (N) supply, grain quality traits, and yield potential using UAV-based Normalized Difference Vegetation Index (NDVI) monitoring in a long-term fertilization field experiment in Eastern Hungary. Six N levels (0–300 kg ha⁻¹) were tested during two consecutive growing seasons (2023–2024) under varying climatic conditions. The obtained results showed that moderate N doses (120–180 kg ha⁻¹) provided the optimal nutrition level for maize, significantly increasing yield compared to the control (+5.086 t ha⁻¹ in 2024), while excessive fertilization above 180 kg ha⁻¹ did not result in any substantial yield gains; however, it significantly modified grain composition. Higher N supply enhanced protein content (+0.95% between 0 and 300 kg ha⁻¹) and reduced starch percentage, confirming the protein–starch trade-off, whereas oil content was less affected by nitrogen fertilization, similarly to previous results. The strongest correlation between NDVI values and yield was measured at the post-silking stage (112 DAS; R = 0.638 in 2023, R = 0.634 in 2024), indicating the suitability of NDVI monitoring for in-season yield prediction. Overall, NDVI-based monitoring proved effective not just for optimizing N management but also for supporting site specific fertilization strategies to enhance maize productivity and nutrient use efficiency. Full article

Due to increased interest in new functional food products, 20 accessions of chufa tubers from the collection of the N.I. Vavilov Institute of Plant Industry, grown in the Kuban–Azov Plain in 2022, as well as bread samples made from mixed flour (70% whole-grain wheat flour, 30% chufa tuber flour) were studied. Biochemical, farinographic, and baking evaluations were carried out. Differences between the properties of dough with the addition of flour from various accessions of chufa tubers were recorded. According to the results of comparative, dispersion, and principal component analysis, all biochemical indicators (oil, fiber, sum of phenolic substances, antioxidant activity) of chufa tuber flour and bread with added chufa flour surpassed control samples (whole-grain wheat flour and wheat bread), with the exception of protein and starch content. Viscoamylographic, farinographic sedimentation, and baking quality evaluations indicated that the dough made from mixed flour was stronger than the control (dough from whole-grain wheat flour), more resistant to kneading, and had a lower degree of liquefaction. In terms of organoleptic properties, differences were also identified, and the accessions that enhance the taste of mixed bread were selected. Therefore, a preliminary conclusion can be drawn that chufa tubers grown in the conditions of the Kuban–Azov Plain with high rheological properties and high sedimentation values of the mixed dough can be recommended for improving the baking properties not only of wheat but also of other bread cereals. Chufa is also a promising crop in the manufacture of functional food products in the Krasnodar region and for the food industry in general as a potential thickener. Full article

Starch granule size distribution plays a vital role in determining the physicochemical properties and processing quality of soft wheat. This study analyzed fourteen soft wheat varieties cultivated in the Huaihe River Basin, an agriculturally important but underrepresented region, to evaluate starch granule size distribution, pasting properties, and their interrelationship. The starch granules were categorized into four size classes, with the volume dominated by A-type granules (>10 μm), while numerically, the majority were <2.8 μm. Pasting characteristics measured by the Rapid Visco Analyzer revealed substantial variation among genotypes. Varieties with a higher proportion of A-type granules exhibited stronger pasting profiles, including higher peak and final viscosities, whereas those with more B-type granules showed lower values. These observations indicate a clear relationship between granule morphology and starch functionality. In the present study, there was a significant positive correlation between peak viscosity, final viscosity, and set-back viscosity. The volume % of granules > 10 μm showed a positive correlation with peak viscosity (r = 0.53 *), final viscosity (r = 0.57 *), and set-back (r = 0.53 *), while the volume percentage of granules < 10 μm was significantly negatively correlated with peak viscosity (r = −0.53 *), final viscosity (r = −0.57 *), and set-back (r = −0.53 *) value. It indicated that the higher the percentage of granules > 10 μm, the higher the peak viscosity, final viscosity, and set-back value in soft wheat grain. Full article

This study examines the potential use of rejected and discarded grains from the common bean industry as a starch source for producing plasticized films with glycerol. The observed morphological characteristics of starch granules from discarded grains were diverse, with round, oval, and kidney-like shapes and sizes ranging from 7 to 34 µm. We determined the pasting profile: the pasting temperature (GT) fell between 72 °C and 74 °C, while the peak viscosity (P_v) demonstrated a significant rise at 10% and 15% starch concentrations. To better understand pasting behavior, mathematical modeling was employed to predict P_v behavior, with an R² value of 0.98. All film formulations were successful, yielding transparent, homogeneous, odorless, flexible films with smooth surfaces. Scanning electron microscopy analysis of the films revealed a flawless surface devoid of fissures, cracks, and pores, displaying a rough texture with a consistent structure and some starch granules resembling empty sacks due to amylose and amylopectin leaching. The highest tensile strength was observed with 6% starch and 1.5 mL of glycerol and the lowest with 4.5% starch and 3.9 mL of glycerol. The findings suggest that starch derived from discarded grains from the bean industry has unique characteristics and properties, making it a promising alternative source for intelligent packaging development. Full article

Soils in alpine mining areas suffer from severe heavy metal contamination and infertility, yet little is known about the effects of different materials on soil improvement in such regions. In this study, a field experiment was conducted in farmlands contaminated by the Lanping lead–zinc mine in Yunnan, China, to compare the effects of four materials (biochar, organic fertilizer, lime, and sepiolite) on soil properties, heavy metal (lead (Pb), cadmium (Cd), copper (Cu), and zinc (Zn) fractions and their availability, and the growth of Phaseolus coccineus L. Results showed that biochar and organic fertilizer significantly enhanced soil nutrient content and enzyme activities. Lime, biochar, and sepiolite effectively reduced heavy metal bioavailability by promoting their transition to residual fractions. Notably, biochar outperformed other materials by substantially increasing grain yield (by 82%), improving nutritional quality (sugars, protein, and starch contents raised by 20–88%), and reducing heavy metal accumulation in grains (by 36–50%). A comprehensive evaluation based on subordinate function values confirmed biochar as the most effective amendment. Structural equation modeling further revealed that biochar promoted plant growth and grain quality primarily by enhancing soil available nutrients and immobilizing heavy metals. These findings demonstrate the strong potential of biochar for remediating heavy metal-contaminated farmlands in alpine lead–zinc mining regions. Full article

Phosphorus supply significantly influences starch and amino acid accumulation in wheat grains, yet the mechanisms coordinating sugar–amino acid metabolic crosstalk under differential phosphorus availability remain elusive. To address this knowledge gap, we conducted a controlled trial on phosphorus supplementation using wheat (Triticum aestivum L. cv. Xindong 20) with three treatments: P0 (0 kg·ha⁻¹, phosphorus deficiency), LP (105 kg·ha⁻¹, normal phosphorus), and HP (210 kg·ha⁻¹, phosphorus excess). Seed samples were collected at 7, 14, and 21 days post-anthesis (DPA). This design enabled a systematic analysis of how phosphorus availability modulates the metabolic relationship between amino acids and sugars during grain development. Proteomic profiling of starch granule-associated proteins (SGAPs) demonstrated that wheat reprograms carbohydrate allocation in response to phosphorus availability. Notably, differentially expressed proteins (DEPs) exhibited tissue-specific regulation patterns: pericarp-localized DEPs were predominantly up-regulated, whereas endosperm-associated DEPs showed down-regulation under phosphorus modulation. Mechanistically, phosphorus application triggered accelerated starch catabolism in the pericarp (Pe) concomitant with enhanced starch anabolism in the endosperm (En), thereby altering the temporal dynamics of starch granule development. These findings elucidate key regulatory patterns of phosphorus nutrition in wheat grain metabolism, establishing a biochemical framework for the optimization of starch quality parameters. The identified phosphorus-responsive metabolic networks reveal pivotal mechanisms that support the development of precision breeding strategies and phosphorus-efficient cultivation practices. This research offers novel pathways to simultaneously improve both grain yield and nutritional quality in wheat production systems. Full article

The glycemic index (GI) of rice is a complex trait, affected by amylose content (AC), size, and packaging of starch granules (SGs). In this study, the electron microscopy results of starch morphology of nine rice genotypes showed varying AC (6.93–36.9%), and the predicted GI (pGI: 41.07–82.46) in relation to genetic factors revealed that smaller SG surface area (20.06 µm²) and irregular morphology (Hap 3-3 P-11, pGI = 41.07) were associated with a lower pGI, while larger SG surface area (47.68 µm²) and spherical structure were associated with a higher pGI (NON-HAI, pGI = 82.46). The expression of starch biosynthesis and packaging-related genes (OsSSIIb, OsSSIIc, OsSBEIIa, OsISA1, OsISA3, OsGBP, OsFLO6, and OsBT1) revealed downregulation of OsGBP and OsISA3 genes in low pGI lines IRRI-147 (pGI = 56.2) and Hap 3-1-p-18 (pGI = 41.79), respectively, while higher levels of expression of the OsBT1 gene in Makro (pGI = 59.06) and OsSSIIb in Swarna (pGI = 58.06) were observed. All these genotypes had similar AC (~30%), but the difference in expression pattern was correlated with starch granule morphology, suggesting its role in influencing pGI. Further, analysis of allelic variation in eight starch-related genes across 20 rice genotypes showed that allelic variants of only OsGBP were correlated with AC, where allele group 2 showed lower AC (9.62%), while all other allele groups showed consistently high AC (22–24%). These findings underscore the critical role of starch granule morphology and OsGBP allelic variation in determining AC and GI, providing actionable insights for developing low GI rice varieties using tools like CRISPR. Full article

Yield components are the most important breeding objectives, directly determining maize high-yield breeding. It is well known that these traits are controlled by a large number of quantitative trait loci (QTL). Therefore, deeply understanding the genetic basis of yield components and identifying key regulatory candidate genes can lay the foundation for maize marker-assisted selection (MAS) breeding. In this study, our aim was to identify the key genomic regions that regulate maize yield component formation through bioinformatic methods. Herein, 554 original QTLs related to 11 yield components, including ear length (EL), hundred-kernel weight (HKW), ear weight (EW), cob weight (CW), ear diameter (ED), cob diameter (CD), kernel row number (KRN), kernel number per row (KNR), kernel length (KL), grain weight per plant (GW), and kernel width (KW) in maize, were collected from the MaizeGDB, national center for biotechnology information (NCBI), and China national knowledge infrastructure (CNKI) databases. The consensus map was then constructed with a total length of 7154.30 cM. Approximately 80.32% of original QTLs were successfully projected on the consensus map, and they were unevenly distributed on the 10 chromosomes (Chr.). Moreover, 44 meta-QTLs (MQTLs) were identified by the meta-analysis. Among them, 39 MQTLs controlled two or more yield components, except for the MQTL4 in Chr. 1, which was associated with HKW; MQTL11 in Chr. 2, which was responsible for EL; MQTL19 in Chr. 3, which was related to KRN; MQTL26 in Chr. 5, which was involved in HKW; and MQTL36 in Chr. 7, which regulated EL. These findings were consistent with the Pearson correlation results, indicating that these traits exhibited co-linked heredity phenomena. Meanwhile, 159 candidate genes were found in all of the above MQTLs intervals, of which, 29 genes encoded E3 ubiquitin protein ligase, which was related with kernel size and weight. Other genes were involved in multiple metabolic processes, including plant hormones signaling transduction, plant growth and development, sucrose–starch synthesis and metabolism, and reproductive growth. Overall, the results will provide reliable genetic resources for high-yield molecular breeding in maize. Full article

Low light intensity is a major abiotic stress that severely affects rice yields, particularly in India and Southeast Asia, causing yield reductions of 35–40% during the wet season compared to the dry season. Tolerant rice genotypes exhibit adaptive changes at anatomical, physiological, biochemical, and molecular levels under low-light stress, enabling higher yields compared to susceptible varieties. Our study identified 20 novel QTLs associated with grain yields and nine related traits under low-light and control (normal)-light conditions, using a recombinant inbred line (RIL) population derived from the cross between the low-light-tolerant variety Swarnaprabha and the low-light-susceptible variety IR8. Across the Kharif seasons of 2019 and 2021, 33 stable QTLs were identified, with 11, 13, and 9 QTLs specific to low-light, normal-light, and both conditions, respectively. Of these, Swarnaprabha contributed 28 QTLs, while five were contributed by IR8. Notably, the study identified 11 and 9 novel QTLs under low-light and both conditions, respectively. Three hotspot regions on chromosomes 1, 4, and 8 were identified. These regions harbored 10 novel QTLs and revealed twenty candidate genes, out of which three key hub genes, OsAUX1, OsSBDCP1, and OsNPF5.16, were identified. These hub genes are involved in hormone signaling, starch metabolism, and nitrogen metabolism, respectively. A comprehensive expression analysis of these genes indicated that they are linked to low-light tolerance, offering deeper insights into the genetic and molecular mechanisms underlying low-light resilience. These findings provide valuable genomic resources and potential markers for breeding programs for improving rice productivity under low-light conditions. Full article

In order to explore the effect of Wickerhamomyces on the production of flavor compounds in Xiaoqu Baijiu (XQBJ), this study examined the correlation between the fungal communities in Xiaoqu and ester compounds. It was hypothesized that Wickerhamomyces contributes to the aroma of Xiaoqu. Intensified fermentation methods were used to validate the role of Wickerhamomyces anomalus in XQBJ brewing. Compared to traditional Xiaoqu, intensified fermentation significantly increased the acidity of fermented grains and starch utilization rate (p < 0.05). The fungal communities in fermented grains were analyzed by high-throughput sequencing technology. The dominant fungi in both control and test groups were Saccharomyces, Cyberlindnera, Rhizopus, and Meyerozyma, with Wickerhamomyces replacing Saccharomymycopsis in the enhanced group. Flavor compounds in the fermentation experiments were analyzed, revealing that ethyl acetate content in XQBJ increased by 949.94 mg/L in the test group, while isoamyl alcohol decreased by 23.62 mg/L and isobutanol decreased by 34.81 mg/L. Functional prediction analysis using PICRUSt2 confirmed a higher relative abundance of enzymes involved in ethyl acetate metabolism and a lower relative abundance of enzymes involved in higher alcohol metabolism in the test group. These findings demonstrate that Wickerhamomyces enhances ethyl acetate production and reduces higher alcohols during XQBJ brewing, offering a theoretical foundation for enhancing the quality of XQBJ. Full article

The incidence of chronic kidney disease (CKD) has increased worldwide in recent years. Many factors can contribute to the progression of CKD, some of which are dietary patterns. Adequate control of protein, phosphorus, potassium, and sodium intake can significantly slow the progression of CKD. Most studies and nutritional guidelines addressing the care of people with CKD have focused primarily on dietary recommendations regarding macronutrient intake and the restriction of individual micronutrients. Traditionally, the consumption of fiber-rich fruits and vegetables has been restricted in patients with CKD to combat hyperkalemia. Among the reasons often given for this restriction are concerns about their high potassium and phosphorus contents. Limiting the intake of whole grains in CKD patients has also been recommended. However, findings indicate that phosphorus in plant foods is not fully absorbed in humans. Potassium contribution from vegetables can be reduced by culinary treatments, and when highly insoluble fiber is present in vegetables, it promotes potassium excretion through the intestine, which could help control the risk of hyperkalemia in CKD patients. Other recent findings have shown beneficial effects of vegetable bioactive compounds and resistant starch on CKD patients. The aim of the present review was to compile and discuss traditional recommendations for the use of plant-based foods for patients with CKD, as well as the mechanisms through which such foods may contribute to improving CKD progression. Full article

This study investigates the properties of biopolymer films derived from semolina and farina, focusing on the effect of varying concentrations of glycerol as a plasticizer. The research fills a gap in the study of grains such as semolina and farina, which have the potential to expand the range of biodegradable materials. Mechanical tests revealed significant differences between the two film types. Farina-based films were notably more ductile, exhibiting an elongation at break of up to two times their original length, but with a low tensile strength of only 1–2 MPa. In contrast, semolina-based films were significantly stiffer, with a maximum elongation at break of 10%. A notable exception was the semolina film with a 25% glycerol concentration, which displayed an exceptionally high tensile strength of 17 MPa. This is a significant improvement over the typical potato starch-based film tested, which breaks at 5 MPa under static tearing. Furthermore, the study examined the films’ morphology, color, SFE, and surface roughness. Free surface energy ranged from 40 to 60 mJ/m² in the tests, where the influence of the plasticizer was significant. Color tests clearly show yellow discoloration. Full article

A rice grain’s proximate composition determines its nutritional potential. Macronutrient quantification is essential to identify superior genotypes and direct breeding efforts to reach more people who are vulnerable. Conventional methods to determine proximate composition are highly accurate; however, they remain time-consuming, costly, and destructive. Near-infrared (NIR) spectroscopy enables proximate composition analysis in a non-destructive, rapid, inexpensive, and practical manner, providing results similar to well-established conventional methods. This study aimed to evaluate the feasibility of NIRs-based selection to identify more nutritious rice genotypes. A collection of 155 rice genotypes grown in Southern Brazil was used. After harvest, grains were hulled, polished, and milled. NIRs was used to determine moisture, starch, protein, fat, ash, and fiber contents in rice flour. It was possible to differentiate genotypes with higher and lower levels of the investigated components. Similar and distinct values were observed in comparison to other studies, indicating the accuracy of NIRs and the effect of genotype and environment, respectively. Starch is correlated negatively with protein and fat, preventing the identification of genotypes with high levels of these three components. PCA enabled the separation of the genotypes but highlighted the complexity of sample distribution. NIRs is an effective and accurate method to determine the proximate composition of rice, enabling the selection of more nutritious genotypes. Full article

Although the role of OsHY5L2 in promoting photomorphogenic development is well characterized, its function in regulating rice quality is poorly understood. In this study, we found that OsHY5L2 plays an important role in regulating starch metabolism and modulating its fine structure and physicochemical properties. Overexpression of OsHY5L2 significantly reduced the chalky grain rate and degree of chalkiness but dramatically increased the head rice rate. OsHY5L2 was found to negatively regulate the accumulation of starch in rice endosperm by inhibiting starch biosynthesis and promoting starch hydrolysis. Transcriptomic analysis revealed that OsHY5L2 mainly regulated the expression of genes encoding enzymes involved in starch and sucrose metabolism. Moreover, OsHY5L2 overexpression induced the formation of numerous pinhole structures on the surfaces of starch granules. Analysis of the amylopectin chain length distribution showed that overexpression of OsHY5L2 decreased the proportion of ultra-short chains (DP 6–7) and intermediate chains (DP 13–24) of amylopectin while increasing the proportion of short chains (DP 8–12) and long chains (DP 25–36). Further studies demonstrate that OsHY5L2 overexpression altered the pasting properties of rice starch by affecting its multi-level structure and function. The results of this study improve our understanding of the functions of OsHY5L2 in regulating rice quality. Full article