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19 pages, 6048 KB  
Article
Methyl Jasmonate Mediates ALA-Induced Salt Tolerance in Tomato Seedlings
by Junfang Feng, Yongmei He, Peng Bai, Junwen Wang, Jiaqi Chen, Xingpan Shang, Yue Wu, Jihua Yu, Zhongqi Tang, Zeci Liu and Jianming Xie
Horticulturae 2025, 11(11), 1363; https://doi.org/10.3390/horticulturae11111363 - 13 Nov 2025
Abstract
5-Aminolevulinic acid (ALA) is a natural and environmentally friendly plant growth regulator that plays an important role in enhancing plant tolerance to a wide range of environmental stresses. Exogenous application of ALA enables rapid and efficient physiological regulation. Additionally, methyl jasmonate (MeJA) enhances [...] Read more.
5-Aminolevulinic acid (ALA) is a natural and environmentally friendly plant growth regulator that plays an important role in enhancing plant tolerance to a wide range of environmental stresses. Exogenous application of ALA enables rapid and efficient physiological regulation. Additionally, methyl jasmonate (MeJA) enhances salt tolerance in tomato seedlings by regulating ALA to promote jasmonic acid (JA) accumulation and strengthening the antioxidant defense system. To investigate how exogenous ALA alleviates salt stress physiologically, this study used ‘Condine Red’ tomato as the experimental material and examined the effects of MeJA-mediated ALA on the growth characteristics and stress tolerance mechanisms of tomato seedlings under salt stress. The results indicated that salt stress significantly inhibited tomato seedling growth, leading to marked reductions in biomass, chlorophyll content, and the enzymatic activities of POD, CAT, and APX. In contrast, SOD activity, MDA content, NPQ, soluble protein content, proline content, endogenous JA levels, and the expression of related genes were significantly increased. Under salt stress, exogenous application of ALA and MeJA alleviated the inhibitory effects on tomato seedlings. However, SHAM (salicylhydroxamic acid) aggravated salt stress damage to plants. The addition of ALA significantly mitigated these salt stress-induced injuries. These findings suggest that ALA may enhance salt tolerance in tomato seedlings by promoting JA accumulation and bolstering the antioxidant defense system. Full article
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20 pages, 3768 KB  
Article
Effects of Exogenous Spermidine on Germination and Seedling Growth of Rice Under Salt Stress: Physiological and Transcriptomic Insights
by Biaoxin Fei, Jian Liu, Baolai Mao, Ruixiang Wang, Yifan Meng, Haidong Huang, Xin Lu, Fei Zhao and Yongbo Duan
Curr. Issues Mol. Biol. 2025, 47(11), 946; https://doi.org/10.3390/cimb47110946 (registering DOI) - 13 Nov 2025
Abstract
Salt stress severely impairs rice (Oryza sativa L.) germination and seedling establishment. Exogenous spermidine (Spd) has been shown to regulate stress tolerance in plants, but whether it acts during rice germination and seedling establishment under salt stress remains unclear. Here, rice seeds [...] Read more.
Salt stress severely impairs rice (Oryza sativa L.) germination and seedling establishment. Exogenous spermidine (Spd) has been shown to regulate stress tolerance in plants, but whether it acts during rice germination and seedling establishment under salt stress remains unclear. Here, rice seeds (cv. Jindao 919) were exposed to 75 mM NaCl with different Spd concentrations (0–1.4 mM), and physiological, biochemical, and transcriptomic responses were evaluated. The findings showed that salt stress had a pronounced inhibitory effect on both seed germination and seedling development. Exogenous Spd effectively alleviated these negative effects, with the most significant improvements observed at 1.0–1.2 mM: germination rate increased by 3.98–8.52%, seedling root length increased by 17.74–37.68%, soluble sugar content increased by 29.83–230%, and SOD and POD activities increased by 29.81–40.3% and 18.45–44.0%, respectively, while MDA content decreased by 36.28–40.3%. Further transcriptomic analysis identified a total of 1835 differentially expressed genes (DEGs). KEGG enrichment analysis revealed these genes were concentrated in key pathways including terpenoid biosynthesis, phenylpropanoid biosynthesis, and amino sugar and nucleotide sugar metabolism, thus alleviating the negative impact of salt stress on rice germination and seedling development. These pathways are closely related to gibberellin metabolism, lignin biosynthesis, and amino sugar metabolism, further revealing the regulatory role of Spd. Overall, 1.0–1.2 mM Spd was most effective in alleviating salt stress by synergistically regulating antioxidant defense, osmoregulation, and metabolic reprogramming, enhancing rice’s overall stress tolerance. This study provides theoretical guidance for precise regulation of Spd concentration to improve rice performance in saline-alkaline soils, and reveals the sustained promoting effects of Spd across various developmental stages of rice and its underlying molecular mechanisms. Full article
(This article belongs to the Section Molecular Plant Sciences)
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20 pages, 4071 KB  
Article
Novel Low-Temperature Fabricated Coal Gangue-Based Porous Ceramics: Water Absorption/Retention Features and Their Application in Dryland Agriculture
by Hao Wang, Haozhong Zhang, Peng Zhao and Yongzhen Wang
Sustainability 2025, 17(22), 10111; https://doi.org/10.3390/su172210111 - 12 Nov 2025
Abstract
This study addresses water scarcity in arid regions by developing low-temperature-sintered porous ceramics for agricultural water management, utilizing coal gangue solid waste as the primary resource. Systematic single-factor experiments first identified the optimal sintering temperature (615 °C) and polystyrene content (25%) that critically [...] Read more.
This study addresses water scarcity in arid regions by developing low-temperature-sintered porous ceramics for agricultural water management, utilizing coal gangue solid waste as the primary resource. Systematic single-factor experiments first identified the optimal sintering temperature (615 °C) and polystyrene content (25%) that critically balance pore formation and structural integrity. Building on this, orthogonal experiment optimization yielded an optimal formulation exhibiting exceptional comprehensive performance (coal gangue 20 g, starch 25 g, glass powder 11 g, polystyrene 27 g): 149.70% water absorption, 57.75 h water retention, 77.28% porosity, and 0.55 MPa compressive strength. The material’s graded pore structure, achieved through composite pore-formers (polystyrene/starch) and diatomaceous earth, underlies its enhanced capillary action. The pot experiment of Chinese cabbage confirmed its effect, shortened the emergence time of seedlings to <24 h, and significantly improved the emergence rate and the growth of seedlings in the early stage (7 days). This work provides a new way for the value of coal gangue in dryland agriculture and ecological restoration. Full article
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15 pages, 4269 KB  
Article
Superfamily of Glycolipid Transfer Proteins (GLTPs): Accelerated Cell Death 11-like (ACD11) Enhances Zn Tolerance
by An-Sheng Wang, Da-Ru Wang, Xin Liu, Guo-Lin Chen, Qing Wang, Wen-Long Ji, Yan-Yan Guo, Cheng-Hua Cao, Yan-Jiao Chen, Tian-Tian Wang, Chun-Ling Zhang and Chun-Xiang You
Horticulturae 2025, 11(11), 1357; https://doi.org/10.3390/horticulturae11111357 - 12 Nov 2025
Abstract
Zinc (Zn) is an essential trace element that plays a crucial role in plant growth and development, but excessive Zn can be stressful or even toxic to plants. The GLTP superfamily is critical for lipid metabolism and membrane stability maintenance, yet its function [...] Read more.
Zinc (Zn) is an essential trace element that plays a crucial role in plant growth and development, but excessive Zn can be stressful or even toxic to plants. The GLTP superfamily is critical for lipid metabolism and membrane stability maintenance, yet its function in plant Zn tolerance remains unclear. In this study, zinc stress treatment experiments were performed using transgenic apple calli, apple seedlings, Arabidopsis thaliana, and Solanum lycopersicum. Under Zn treatment, compared with the wild type (WT), the apple seedlings of the MbACD11 transgenic line exhibited significantly higher plant height and fresh weight, with increases of 5.87% and 93.21% respectively. Meanwhile, their MDA level, relative electrical conductivity, and accumulations of H2O2 and O2 were all significantly reduced, with decreases of 20.47%, 35.47%, 31.50%, and 36.78% respectively. Consistently, these data showed the same trend in calli, Arabidopsis thaliana, and tomato. These results demonstrated that the overexpression of MbACD11 significantly enhanced Zn tolerance in transgenic plants, and also verified that the function of this gene may be conserved across different species. In summary, this study establishes a molecular framework and theoretical basis for improving plant tolerance to Zn stress and paves the way for future mechanistic investigations. Full article
(This article belongs to the Section Biotic and Abiotic Stress)
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21 pages, 10547 KB  
Article
Hydrogen Sulfide Is Involved in Melatonin-Induced Drought Tolerance in Maize (Zea mays “Beiqing340”)
by Jianhong Ren, Xinru Yan, Wenjing Wu, Xiaoxiao Yang and Yanhui Dong
Agronomy 2025, 15(11), 2592; https://doi.org/10.3390/agronomy15112592 - 11 Nov 2025
Abstract
Melatonin and hydrogen sulfide (H2S) have both been demonstrated to enhance plant drought tolerance. However, the relationship between melatonin and H2S during the drought resistance response remains unclear. In this study, under drought stress, the synthesis pathways for both [...] Read more.
Melatonin and hydrogen sulfide (H2S) have both been demonstrated to enhance plant drought tolerance. However, the relationship between melatonin and H2S during the drought resistance response remains unclear. In this study, under drought stress, the synthesis pathways for both melatonin and H2S in maize seedlings were activated. The application of exogenous melatonin enhanced the expression of key genes, namely LCD and DCD, which are involved in H2S synthesis, thereby promoting the accumulation of H2S. Conversely, the application of NaHS did not significantly influence the expression of genes related to melatonin synthesis or the levels of endogenous melatonin. Melatonin enhanced drought tolerance in maize through the H2S signaling pathway, as evidenced by a 124.1% increase in the photosynthetic rate and improved activity of antioxidant enzymes. Specifically, there were increases of 66.5%, 75.6%, and 51.0% in the activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), respectively. Furthermore, there was an elevation in the levels of osmotic regulatory substances and non-enzymatic antioxidants. The application of the H2S scavenger (HT) significantly inhibited the drought tolerance effects mediated by melatonin, whereas the melatonin synthesis inhibitor (p-CPA) did not exert a significant impact on the drought resistance induced by H2S. Overall, our findings suggest that H2S plays a role in the melatonin-mediated enhancement of drought tolerance in maize, primarily through coordinated modulation of osmotic balance and antioxidant defense systems. Full article
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26 pages, 5184 KB  
Article
Integrated Metabolomics and Transcriptomics Analyses Reveal the Critical Role of Caffeic Acid in Potato (Solanum tuberosum L.) Cold Tolerance
by Xiang Li, Guonan Fang, Yongzhen Ma, Wang Su, Shenglong Yang, Yun Zhou, Yanping Zhang and Jian Wang
Plants 2025, 14(22), 3447; https://doi.org/10.3390/plants14223447 - 11 Nov 2025
Abstract
Owing to the high altitude and short frost-free period of the Tibetan Plateau, potato plants are frequently exposed to cold stress (CS), which severely restricts their growth and productivity. Thus, understanding the mechanisms underlying cold tolerance in potato varieties is crucial for breeding [...] Read more.
Owing to the high altitude and short frost-free period of the Tibetan Plateau, potato plants are frequently exposed to cold stress (CS), which severely restricts their growth and productivity. Thus, understanding the mechanisms underlying cold tolerance in potato varieties is crucial for breeding improvement. This study aims to investigate the role of caffeic acid in potato cold tolerance and to elucidate the molecular mechanisms underlying the CS response. To achieve this, we conducted comprehensive metabolomic and transcriptomic analyses of KY130 (cold-tolerant) and KY140 (cold-sensitive) potato cultivars under CS at the seedling stage. ELISA results showed that caffeic acid levels were higher in KY130 than in KY140, while CS-KY130 exhibited higher levels than those of CS-KY140. Across all treatments, KY130 showed significantly higher activities of antioxidant enzymes (CAT and SOD) and higher contents of osmolytes (proline, soluble protein, and soluble sugar) than those of KY140. Caffeic acid and naringenin* were identified as candidate metabolites potentially involved in the direct and indirect cold resistance of potatoes. StPAL(Soltu.Atl.03_2G004060, Soltu.Atl.03_2G004070, Soltu.Atl.03_2G008130) and StCSE(Soltu.Atl.04_1G006370 and Soltu.Atl.04_3G005440), identified as upstream regulators of caffeic acid, were associated with the direct and indirect cold resistance of potatoes. KEGG pathway analysis of differentially accumulated metabolites and differentially expressed genes revealed several key metabolic pathways, including “flavonoid-related metabolism,” “lipid metabolism,” and “amino acid metabolism.” This research enhances our understanding of caffeic acid and the molecular mechanisms involved in the response of potatoes to CS, and supports future efforts in potato screening and breeding programs. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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18 pages, 6147 KB  
Article
Analysis of Carbon Impacts of the Sanya Bay Ecological Restoration Project
by Lulu Wang, Qinghe Zhang, Feng Lu, Gaogui Guo, Jinfeng Zhang, Fei Yan and Guangwei Liu
J. Mar. Sci. Eng. 2025, 13(11), 2126; https://doi.org/10.3390/jmse13112126 - 10 Nov 2025
Viewed by 79
Abstract
As global warming and the greenhouse effect become increasingly evident, and in response to the “Carbon Peak” and “Carbon Neutrality” policies, extensive research has been conducted on “blue carbon” sinks in marine and coastal zones. Due to their low cost and flexibility, hydro-eco [...] Read more.
As global warming and the greenhouse effect become increasingly evident, and in response to the “Carbon Peak” and “Carbon Neutrality” policies, extensive research has been conducted on “blue carbon” sinks in marine and coastal zones. Due to their low cost and flexibility, hydro-eco coupled numerical modeling has emerged as a prominent method for studying carbon sequestration. This study employs a two-dimensional NPZD (Nutrient-Phytoplankton-Zooplankton-Detritus) framework coupled with tidal flow dynamics to analyze changes in flow fields, ecological benefits, and carbon sequestration effects before and after the restoration project in Sanya Bay. Additionally, the impact of planting seagrass seedlings near the artificial island on carbon sequestration is investigated. The seagrass restoration achieved approximately 0.57 Mg C sequestration within one month. The project has achieved remarkable benefits. According to different working condition examples, the annual carbon sink of the artificial island and the sand replenishment restoration has increased by 83.83 Mg compared with that before the restoration. Full article
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17 pages, 2276 KB  
Article
Comparative Functional Analysis of COLD1 and GPA1 in Processing Tomatoes: Overexpression of COLD1 Significantly Enhances Seedling Cold Tolerance and Physiological Responses
by Bo Chen, Qian Li, Yueyue Ma, Xiangxue Yu, Chenjing Li, Ziyu Yang, Rui Ni, Fuyuan Liu, Yongtao Xia, Xinyong Guo and Li Zhang
Horticulturae 2025, 11(11), 1352; https://doi.org/10.3390/horticulturae11111352 - 10 Nov 2025
Viewed by 164
Abstract
Low temperature severely limits tomato (Solanum lycopersicum) production, yet the molecular mechanisms governing cold tolerance—particularly those involving COLD1 and GPA1—remain incompletely defined. To address this, processing tomato lines overexpressing COLD1 or GPA1 were generated and evaluated for seedling-stage cold tolerance, [...] Read more.
Low temperature severely limits tomato (Solanum lycopersicum) production, yet the molecular mechanisms governing cold tolerance—particularly those involving COLD1 and GPA1—remain incompletely defined. To address this, processing tomato lines overexpressing COLD1 or GPA1 were generated and evaluated for seedling-stage cold tolerance, with a focus on the expression of key genes such as SlICE1, SlCBF1, and SlCOR518 to elucidate the molecular pathways conferring enhanced cold tolerance. Under cold stress conditions (4 °C for 5 days), physiological and biochemical responses were compared between wild-type and transgenic lines. The results demonstrated that COLD1-overexpressing lines exhibited markedly greater cold tolerance than both wild-type and GPA1-overexpressing lines, notably displaying reduced wilting and membrane injury. At 4 °C, the activities of superoxide dismutase, peroxidase, and catalase in COLD1-overexpressing lines were 122%, 67.4%, and 97.4% higher than those in the wild type, and 44.7%, 21.0%, and 20.6% higher than in GPA1-overexpressing lines, respectively. Furthermore, hydrogen peroxide and superoxide levels were 33.4% and 40.6% lower in COLD1-overexpressing lines compared to the wild type, and 17.8% and 24.0% lower compared to GPA1-overexpressing lines, respectively. Osmolyte accumulation was more pronounced in COLD1 lines, with soluble sugar and proline levels 95.4% and 66.2% higher than in the wild type, and 30.9% and 23.6% higher than in GPA1 lines, respectively. Importantly, changes in key gene expression indicated that both transgenic lines enhance cold tolerance by modulating the ICE1-CBF-COR pathway. Collectively, these findings highlight the superior contribution of COLD1 to cold tolerance in tomato seedlings and provide insights into the molecular mechanisms underlying cold adaptation. Full article
(This article belongs to the Section Biotic and Abiotic Stress)
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21 pages, 7116 KB  
Article
Endophytic Beauveria spp. Enhance Tomato Growth and Resistance to Botrytis cinerea via Transcriptomic Regulation
by Yuming Chang, Xiao Lin, Jing Sui, Qiyun Li, Yu Zhao, Li Sui and Zhengkun Zhang
J. Fungi 2025, 11(11), 799; https://doi.org/10.3390/jof11110799 - 10 Nov 2025
Viewed by 128
Abstract
Entomopathogenic fungi of the genus Beauveria are recognized for their dual role as insect pathogens and plant endophytes, however the majority of research efforts to date have centered on B. bassiana. To address this bias, we evaluated the endophytic traits of five [...] Read more.
Entomopathogenic fungi of the genus Beauveria are recognized for their dual role as insect pathogens and plant endophytes, however the majority of research efforts to date have centered on B. bassiana. To address this bias, we evaluated the endophytic traits of five Beauveria species (B. bassiana, B. brongniartii, B. aranearum, B. amorpha, and B. velata) in tomato (Solanum lycopersicum). Tomato seedlings were inoculated by root drenching with 1 × 108 conidia/mL suspensions, and colonization, plant growth, and resistance to Botrytis cinerea were assessed. All five species colonized tomato tissues, with colonization rates from 33.3% (B. velata) to 56.7% (B. brongniartii). Growth promotion was species dependent: B. bassiana, B. brongniartii, and B. aranearum significantly increased plant height, while B. brongniartii enhanced aboveground biomass. In pathogen assays, all Beauveria-treated plants showed reduced gray mold incidence and severity, with B. brongniartii conferring complete protection. Transcriptome analysis identified 160 differentially expressed genes commonly regulated, including 17 upregulated genes enriched in defense responses, hormone signaling, and photosynthesis. These findings demonstrate that non-B. bassiana species can establish endophytic associations, promote growth, and induce resistance in tomato, expanding the potential of Beauveria spp. as biocontrol agents in sustainable agriculture. Full article
(This article belongs to the Special Issue Advances in Research on Entomopathogenic Fungi)
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17 pages, 4986 KB  
Article
From Forage to Grain: Structural and Functional Changes Occurred During 10 Generations of Transition of Intermediate Wheatgrass (Thinopyrum intermedium) to Kernza®
by Damian A. Ravetta, Alejandra Vilela, Lee DeHaan and Luciana González Paleo
Grasses 2025, 4(4), 46; https://doi.org/10.3390/grasses4040046 - 10 Nov 2025
Viewed by 79
Abstract
Thinopyrum intermedium (c.n. intermediate wheatgrass), marketed under the trade name Kernza, is a promising species for perennial grain production based on seed size, ease of threshing, resistance to shattering, and grain quality. Although numerous generations of breeding for seed yield have been completed, [...] Read more.
Thinopyrum intermedium (c.n. intermediate wheatgrass), marketed under the trade name Kernza, is a promising species for perennial grain production based on seed size, ease of threshing, resistance to shattering, and grain quality. Although numerous generations of breeding for seed yield have been completed, the impact of selection on non-target traits is unknown. Here, we evaluated structural and functional changes brought about by selection for seed yield over a sequence of nine selection cycles (C0 to C9). In two experiments under semi-controlled environmental conditions, we compared gas exchange (A, E, gs, and A/Ci curves), leaf and root morphology, and the structure of seedlings from 10 generations. We found that the selection for yield throughout cycles indirectly changed the leaf structure (leaf size, leaf thickness, and leaf anatomy) and physiology (carbon acquisition and transpiration per unit area), with later cycles showing larger leaves with higher rates of CO2 assimilation and transpiration. Changes in root structure followed similar trends: selection resulted in longer, more branched, and finer roots. These changes in non-target traits are linked to resource-use strategies and to ecosystem services provided by Kernza. Understanding how the domestication of perennial grains impacts non-target traits will aid in the design of integrated breeding programs for Kernza and other perennial grain crops. Full article
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17 pages, 268 KB  
Article
Enhancement of Hybrid Maize Using Potassium-Solubilizing Purple Non-Sulfur Bacteria Under Different Dilution Rates at Early Growth Stages
by Le Thi My Thu, Tran Trong Khoi Nguyen, Dang Le Ngoc Han, Nguyen Duc Trong, Le Thanh Quang, La Cao Thang, Tran Chi Nhan, Ly Ngoc Thanh Xuan and Nguyen Quoc Khuong
Seeds 2025, 4(4), 58; https://doi.org/10.3390/seeds4040058 - 10 Nov 2025
Viewed by 75
Abstract
Although purple non-sulfur bacteria (PNSB) have been studied as good biofertilizers, their direct effects on maize seed vigor remain unclear. Additionally, the seedling stage is a vital factor for the later growth of maize. This study was conducted to evaluate the effectiveness of [...] Read more.
Although purple non-sulfur bacteria (PNSB) have been studied as good biofertilizers, their direct effects on maize seed vigor remain unclear. Additionally, the seedling stage is a vital factor for the later growth of maize. This study was conducted to evaluate the effectiveness of potassium-solubilizing PNSB (K-PNSB) in enhancing the vigor of hybrid maize seeds. A completely randomized design was employed, incorporating single strains, Luteovulum sphaeroides M-Sl-09, Rhodopseudomonas thermotolerans M-So-11, and Rhodopseudomonas palustris M-So-14, as well as a mixture of all three strains. Each was tested at bacterial suspension dilution ratios with sterile distilled water of 1:2000; 1:2250; 1:2500; 1:2750; and 1:3000 (v/v), with three replications per treatment. Each replicate consisted of a Petri dish containing 10 hybrid maize seeds of each hybrid of LVN 10, C.P. 511, and NK7328 Gt/BT, and was incubated for five days. The results showed that K-PNSB significantly enhanced root and shoot development compared to the control (p < 0.05). The 1:2500 dilution of the individual strains and the mixture notably improved germination rate, root length, shoot length, and seedling vigor index compared to the control. At the 1:2500 dilution, the improved vigor index increased by 73.5% for L. sphaeroides, 48.7% for R. thermotolerans, 47.4% for R. palustris, and 78.5% for the mixed inoculum in the LVN 10 hybrid. Similar trends were observed for C.P. 511 and NK7328 hybrids, confirming strain- and hybrid-specific responses. The findings highlight that K-PNSB can serve as effective bio-priming agents to enhance maize seed vigor through mechanisms related to potassium solubilization and phytohormone production. Field-scale validation is recommended to assess their long-term agronomic potential. Full article
13 pages, 3178 KB  
Article
Overexpression of TpGSDMT in Rice Seedlings Promotes High Levels of Glycine Betaine and Enhances Tolerance to Salt and Low Temperature
by Jinde Yu, Zihan Zhang, Ning Zhao, Xiaofei Feng, Dan Zong and Lihua Zhao
Biomolecules 2025, 15(11), 1576; https://doi.org/10.3390/biom15111576 - 10 Nov 2025
Viewed by 166
Abstract
Salt and low temperature are serious abiotic stresses and important constraints to agricultural productivity across the globe. These abiotic stresses negatively affect plant growth and physiological, biochemical, and molecular processes. Glycine betaine (GB) is an important osmoprotectant that enables plants to resist salinity, [...] Read more.
Salt and low temperature are serious abiotic stresses and important constraints to agricultural productivity across the globe. These abiotic stresses negatively affect plant growth and physiological, biochemical, and molecular processes. Glycine betaine (GB) is an important osmoprotectant that enables plants to resist salinity, low temperature, and drought. GB can be synthesized in many organisms, including animals, plants, and bacteria. In higher plants, GB is synthesized through two-step oxidation of choline. However, rice, an important food crop, cannot synthesize GB. Thus, conferring the ability to synthesize GB to rice through genetic engineering is of great significance for enhancing its tolerance to abiotic stress. Recently, an enzyme, GSDMT (glycine, sarcosine, and dimethylglycine methyltransferase) was found in a diatom, Talassiosira pseudonana, and found able to catalyze the three successive methylation steps of glycine to form GB. This biosynthetic pathway for GB synthesis is also the simplest in living organisms. Here, the optimized codon of the TpGSDMT gene sequence was synthesized and cloned into an overexpression vector, pBWA(V)HS, which contains a CaMV 35S promoter, and then, the constructed vector was transferred into rice (Oryza sativa L. ssp. Japonica). The GB content in transgenic rice showing overexpression of TpGSDMT was significantly increased, and these transformants exhibited markedly enhanced tolerance to salt and low temperature. These results indicate that the TpGSDMT gene can be used for the genetic improvement in crop plants’ resistance to salinity and low temperature. Full article
(This article belongs to the Section Molecular Biology)
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20 pages, 2049 KB  
Article
First Observation of Embryonic Development and Paralarvae of Amphioctopus kagoshimensis
by Jinchao Zhu, Juanwen Yu, Siqing Chen, Tianshi Zhang, Qing Chang and Li Bian
Animals 2025, 15(22), 3249; https://doi.org/10.3390/ani15223249 - 10 Nov 2025
Viewed by 174
Abstract
To evaluate the aquaculture potential of Amphioctopus kagoshimensis, we investigated the reproductive biology, embryonic development, and early paralarval morphology of Amphioctopus kagoshimensis under controlled laboratory conditions. Each adult specimen collected from the coastal waters of Fujian Province spawned approximately 4000–5000 eggs (mean [...] Read more.
To evaluate the aquaculture potential of Amphioctopus kagoshimensis, we investigated the reproductive biology, embryonic development, and early paralarval morphology of Amphioctopus kagoshimensis under controlled laboratory conditions. Each adult specimen collected from the coastal waters of Fujian Province spawned approximately 4000–5000 eggs (mean ± SD: 4375 ± 478 eggs), with an overall hatching rate of 75% ± 10% (n = 2). Embryonic development lasted approximately 30 days at 22.0–24.5 °C and followed a classical 20-stage pattern. Hatchlings measured an average mantle length of 1.4 ± 0.1 mm and exhibited a merobenthic strategy, characterized by planktonic paralarvae with progressive morphological differentiation. The chromatophores appeared progressively on the head, mantle, arms, and funnel, with numbers increasing from 5 to 23 per arm by 30 days post-hatching. Paralarvae demonstrated active swimming, feeding behavior, and arm sucker development during rearing. By day 30, mantle length reached 2.5 mm, with significant growth in arm length and behavioral complexity. Its relatively small adult size (mantle length 8 cm), a moderate egg size (2.6 mm), fecundity and successful artificial incubation and 30-day paralarvae seedling suggested it may be a suitable model species for developmental studies and potential candidate for merobenthic octopod aquaculture in East Asia. Full article
(This article belongs to the Special Issue Genetics, Breeding, and Farming of Aquatic Animals)
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14 pages, 1604 KB  
Article
Decoupled Leaf Physiology and Branch-Level BVOC Emissions in Two Tree Species Under Water and Nitrogen Treatments
by Shuangjiang Li, Diao Yan, Xuemei Liu, Maozi Lin and Zhigang Yi
Forests 2025, 16(11), 1708; https://doi.org/10.3390/f16111708 - 9 Nov 2025
Viewed by 214
Abstract
Soil water availability and nitrogen (N) deposition critically influence biogenic volatile organic compound (BVOC) emissions, thereby affecting atmospheric chemistry. However, their differential short- and long-term effects remain unclear. Here, Ormosia pinnata and Pinus massoniana seedlings were exposed to three water regimes (moderate drought, [...] Read more.
Soil water availability and nitrogen (N) deposition critically influence biogenic volatile organic compound (BVOC) emissions, thereby affecting atmospheric chemistry. However, their differential short- and long-term effects remain unclear. Here, Ormosia pinnata and Pinus massoniana seedlings were exposed to three water regimes (moderate drought, MD; normal irrigation, NI; near-saturated irrigation, NSI) and two nitrogen (N0; 0 kg N ha−1 yr−1; N80; 80 kg N ha−1 yr−1) treatments for 20 months. Branch-level BVOC emissions and leaf physiological and biochemical traits were examined after 8 months (short term) and 16 months (long term). In the short term, P. massoniana predominantly emitted α-pinene, β-pinene, and γ-terpinene, whereas O. pinnata emitted isoprene (ISO). After prolonged exposure, ISO became the dominant in both species. Short-term MD and NSI conditions stimulated ISO emissions in O. pinnata, with N80 addition further amplifying this effect. In contrast, long-term treatments tended to suppress ISO emissions in O. pinnata, particularly under N80. Short-term water treatments had no significant effect on monoterpene (MT) emissions in P. massoniana. Under long-term water treatments, N80 suppressed ISO emissions; nevertheless, ISO emission rates (ISOrate) progressively increased with increasing soil water availability. Although leaf intercellular CO2 concentration (Ci), stomatal conductance (gs), and photosynthesis-related enzymes exhibited partial correlations with BVOC emissions, an overall decoupling between leaf traits and emission patterns was evident. Our findings demonstrate the significant changes in both BVOC composition and emission magnitudes under the joint effects of water availability and nitrogen deposition, providing important implications for improving regional air quality modeling and BVOC emission predictions. Full article
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23 pages, 2924 KB  
Article
Multi-Omic Analysis of Bacteriophage-Insensitive Mutants Reveals a Putative Role for the Rcs Two-Component Phosphorelay System in Phage Resistance Development in Erwinia amylovora
by Nassereldin Ibrahim, Janet T. Lin, Darlene Nesbitt, Joshua Tang, Dharamdeo Singh, Lawrence D. Goodridge, Dion Lepp, Antonet M. Svircev, Joel T. Weadge and Hany Anany
Viruses 2025, 17(11), 1487; https://doi.org/10.3390/v17111487 - 9 Nov 2025
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Abstract
Phage therapy has garnered significant attention due to the rise of life-threatening multidrug-resistant pathogenic bacteria and the growing awareness of the transfer of resistance genes between pathogens. Considering this, phage therapy applications are being extended to target plant pathogenic bacteria, such as Erwinia [...] Read more.
Phage therapy has garnered significant attention due to the rise of life-threatening multidrug-resistant pathogenic bacteria and the growing awareness of the transfer of resistance genes between pathogens. Considering this, phage therapy applications are being extended to target plant pathogenic bacteria, such as Erwinia amylovora, which causes fire blight in apple and pear orchards. Understanding the mechanisms involved in phage resistance is crucial for enhancing the effectiveness of phage therapy. Despite the challenges of naturally developing a bacteriophage-insensitive mutant (BIM) of E. amylovora (without traditional mutagenesis methods), this study successfully created a BIM against the podovirus ϕEa46-1-A1. The parent strain, E. amylovora D7, and the BIM B6-2 were extensively compared at genomic, transcriptomic, and phenotypic levels. The phenotypic comparison included the metabolic behavior, biofilm formation, and in planta evaluations of pathogenicity. The results revealed a mutation in strain B6-2 in the rcsB gene, which encodes a second regulator in the Rcs two-component phosphorelay system (TCS). This mutation resulted in significant changes in the B6-2 BIM, including downregulation of amylovoran gene expression (e.g., an average log2 fold change of −4.35 across amsA-L), visible alterations in biofilm formation, increased sensitivity to antibiotics (22.4% more sensitive to streptomycin), and a loss of pathogenicity as assessed in an apple seedling virulence model in comparison to the wildtype strain. The findings presented in this study highlight the critical role of the Rcs phosphorelay system in phage resistance in E. amylovora. Based on these findings, we have proposed a model that explains the effect of the B6-2 rcsB mutation on the Rcs phosphorelay system and its contribution to the development of phage resistance in E. amylovora. Full article
(This article belongs to the Section Bacterial Viruses)
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