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23 pages, 23175 KB  
Article
Time-Resolved Transcriptomics Reveals Coordinated ROS, SOS and ABA Signaling in White Birch
by Linan Yue, Shuo Liu and Song Yu
Forests 2026, 17(8), 919; https://doi.org/10.3390/f17080919 - 5 Aug 2026
Abstract
Salt stress severely limits plant growth, particularly in woody species. In this study, a time-course transcriptomic analysis (0–24 h NaCl treatment) revealed a clear time-dependent transcriptional reprogramming pattern in Betula platyphylla, characterized by rapid early activation followed by gradual stabilization. The response [...] Read more.
Salt stress severely limits plant growth, particularly in woody species. In this study, a time-course transcriptomic analysis (0–24 h NaCl treatment) revealed a clear time-dependent transcriptional reprogramming pattern in Betula platyphylla, characterized by rapid early activation followed by gradual stabilization. The response can be divided into three phases: early stress perception and signaling (1–3 h), mid-stage metabolic and hormonal reprogramming (5–9 h), and late-stage homeostasis and physiological adaptation (12–24 h). Early responses are dominated by signal transduction, the middle phase by metabolic reorganization and enhanced translation, and the late phase by redox and cellular homeostasis. Compared to the limited role of the Dehydration-Responsive Element-Binding protein (DREB) pathway, Abscisic acid (ABA) and Jasmonic acid (JA) signaling appear to play more central regulatory roles. Further analyses revealed the coordinated temporal activation of Reactive oxygen species (ROS), Salt Overly Sensitive (SOS), and ABA pathways: ROS shows an early burst followed by antioxidant activation; the SOS pathway regulates ion homeostasis via the Calcineurin B-like protein (CBL)-CBL-interacting protein kinase (CIPK) module; and ABA signaling progresses from biosynthesis to downstream transcriptional regulation. Protein interaction network analysis further identifies ABA signaling as a central hub integrating Ca2+ signaling, ROS metabolism, and ion transport. Overall, B. platyphylla responds to salt stress through a temporally coordinated regulatory network, providing new molecular insights into salt tolerance mechanisms in woody plants. Full article
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15 pages, 1389 KB  
Article
Identification of Bacillus megaterium as a Probiotic and Its Action to Control Biofilms of Foodborne Pathogens
by Tatsaporn Todhanakasem, Norawachara Sanchan, Panupong Kaituam and Bo Wu
Foods 2026, 15(15), 2745; https://doi.org/10.3390/foods15152745 - 5 Aug 2026
Abstract
Bacillus megaterium isolated from coffee fermentation demonstrated potential probiotic properties against Bacillus cereus ATCC 11778, Escherichia coli ATCC 8739, and Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 through the production of active compounds, including δ-valerolactam and ε-caprolactam. This is the first report [...] Read more.
Bacillus megaterium isolated from coffee fermentation demonstrated potential probiotic properties against Bacillus cereus ATCC 11778, Escherichia coli ATCC 8739, and Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 through the production of active compounds, including δ-valerolactam and ε-caprolactam. This is the first report on its potential utility in producing active compounds, forming protective biofilms, or blocking cell adhesion and aggregation of foodborne pathogenic bacteria on material mimicking the intestinal mucosa. The quorum-sensing signal molecule N-butanoyl-L-homoserine lactone, an auto-inducer for biofilm formation, was detected in the crude culture supernatant, supporting its capability for biofilm formation. Characterization assays showed B. megaterium to tolerate up to 6% bile salt and to survive at pH 1.5. In addition, it demonstrated negative hemolytic activity and sensitivity to antibiotics at the level. It also produced various bioactive compounds that function with therapeutic properties. Therefore, B. megaterium has potential to be used as a human and animal probiotic in the future. Full article
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21 pages, 1000 KB  
Article
Unraveling the Yield-Soil Amelioration Nexus in Alkaline Soils: Agronomic Performance and Soil Chemical Responses of Green Manure Crops
by Ruonan Du, Qiang Gao, Xue Yang, Hui Jin, Lijun Cai, Jumei Zhang, Tsvetkov Yordan Dimitrov, Haibin Zhao, Yu-E Wu, Xing Xing, Shuang Wang, Fei Huang, Chunwei Zhou, Danna Chang, Zhuo Li, Ligang Qin and Rui Zhang
Agronomy 2026, 16(15), 1497; https://doi.org/10.3390/agronomy16151497 - 4 Aug 2026
Abstract
Although green manure crops are widely recognized for ameliorating alkaline soils, some previous studies have focused mainly on laboratory germination screenings or single yield indicators, and field validation of the synergy between high yield and soil improvement remains comparatively limited. This study evaluated [...] Read more.
Although green manure crops are widely recognized for ameliorating alkaline soils, some previous studies have focused mainly on laboratory germination screenings or single yield indicators, and field validation of the synergy between high yield and soil improvement remains comparatively limited. This study evaluated 16 species/accessions with varying salt tolerance in a typical alkaline soil (initial pH 9.01, EC 306 μS·cm−1) in Heilongjiang Province during 2024–2025, based on prior laboratory screening. The experiment was conducted at a single location with three field replicates, and the same plots were monitored across both years. Plant height, fresh/dry grass yield, and soil properties (pH, EC, organic matter, nutrients) were monitored. Glycine max (L.) Merr. and Sesbania Scop. achieved dual synergy, with two-year average fresh yields of 40,733 and 35,750 kg·ha−1, respectively, while reducing soil pH by 0.28–0.29 and electrical conductivity (EC) by 42.2–46.3%. Melilotus officinalis and Vicia villosa Roth exhibited the strongest alkali reduction (pH ↓0.29, EC ↓39.0–39.7%) with moderate yields. Sorghum sudanense showed the highest salt reduction (EC ↓49.0%). Principal component analysis classified the 16 species into four functional types, revealing preliminary ecological patterns for functional differentiation. This study proposes a “laboratory screening–field validation–functional classification” evaluation framework, which requires further validation across different regions and longer time scales for the biological amelioration of alkaline soils. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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18 pages, 35652 KB  
Article
Genome-Wide Identification and Integrative Analysis of the Fruit-Weight 2.2-Like Family Suggests Potential Roles in Fiber Development and Stress Responses in Gossypium hirsutum
by Jiaxin Zhang, Glory Enujioke, Xin Ruan, Yi Yu, Wenhui Song, Jin Peng, Fangjuan Chen, Zhengsheng Zhang and Xueying Liu
Biology 2026, 15(15), 1282; https://doi.org/10.3390/biology15151282 - 4 Aug 2026
Abstract
The Fruit-Weight 2.2-Like (FWL) gene family plays crucial roles in determining organ size and stress responsiveness in plants. However, the FWL family members remain largely unexplored in Gossypium species. In this study, we identified and characterized the FWL family in Gossypium [...] Read more.
The Fruit-Weight 2.2-Like (FWL) gene family plays crucial roles in determining organ size and stress responsiveness in plants. However, the FWL family members remain largely unexplored in Gossypium species. In this study, we identified and characterized the FWL family in Gossypium hirsutum to investigate their gene expansion, functional evolution, and potential association with key agronomic traits. A total of 51 GhFWLs were identified, and their gene structures, domain compositions, and phylogenetic relationships were comprehensively analyzed. Expression profiling under heat, cold, salt, and drought stress conditions revealed that most GhFWLs participate in abiotic stress response pathways. Haplotype-based association analysis revealed significant associations for 14 GhFWLs with fiber-related traits, suggesting their potential functions in regulating fiber development. Furthermore, silencing the family member GhMCA1 provided supporting evidence for its role in salt stress tolerance. Our findings provided insightful information about the FWL gene family in G. hirsutum and highlighted candidate genes for improving fiber-related traits and stress tolerance through molecular breeding approaches. Full article
(This article belongs to the Special Issue The Potential of Genetics and Plant Breeding in Crop Improvement)
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20 pages, 9011 KB  
Article
Synergistic Seedling Responses of Distinct Oat Cultivars to Compound Saline–Alkali Stress: Phenotypic, Physiological, and Metabolomic Mechanisms
by Hongna Dou, Xiaoli Wei, Hao Sun, Tingyan Wang, Jing Liu and Wei Wang
Biology 2026, 15(15), 1275; https://doi.org/10.3390/biology15151275 - 3 Aug 2026
Abstract
Soil salinization and alkalization severely limit agricultural sustainability in alpine regions. The integrated responses of oats to complex saline–alkali stress, covering phenotypic, physiological, and metabolomic alterations, remain poorly elucidated. This study aimed to clarify the synergistic adaptive mechanisms of oats with differential saline–alkali [...] Read more.
Soil salinization and alkalization severely limit agricultural sustainability in alpine regions. The integrated responses of oats to complex saline–alkali stress, covering phenotypic, physiological, and metabolomic alterations, remain poorly elucidated. This study aimed to clarify the synergistic adaptive mechanisms of oats with differential saline–alkali tolerance. Three oat varieties with distinct tolerance levels, including the tolerant cultivar Meida, the moderately tolerant cultivar Qingtian No. 2, and the sensitive cultivar Qinghai Sweet Oat, were treated with a 150 mmol·L−1 mixed saline–alkali solution (Na2SO4:NaCl:NaHCO3 = 2:1:1, pH 8.65) to simulate the natural alpine soil environment of Qinghai Province. Compound saline–alkali stress markedly inhibited oat growth and aggravated cellular oxidative damage. The tolerant cultivar effectively alleviated stress injury by improving antioxidant enzyme activities and accumulating osmoprotectants. A total of 396 core differential metabolites were screened in this study, and flavonoid biosynthesis was identified as a conserved core pathway for oat stress resistance. Tolerant oat varieties simultaneously activated defense responses and energy metabolism to adapt to stress conditions. In contrast, sensitive varieties only depended on basal metabolic adjustments to cope with stress. These findings clarify the differential adaptive strategies of oats under saline–alkali stress. They provide key metabolic marker resources and a solid theoretical basis for the breeding and cultivation of salt–alkali-tolerant oats in alpine saline–alkali land. Full article
(This article belongs to the Section Plant Science)
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12 pages, 892 KB  
Article
Gas Exchange and Chlorophyll Fluorescence Responses of Açaí and Juçara Palms Under Salt Stress
by Tâmara Moreira Silva, Almy Junior Cordeiro de Carvalho, Paulo Cesar dos Santos, Marta Simone Mendonça Freitas, Rozane Franci de Moraes Tavares, Adrielly de Jesus Canedo, Álan Chrisleyr Maracahipes, Alessandro Coutinho Ramos, Vinicius de Freitas Manhães, Moises Zucoloto, Leandro Pin Dalvi, Henrique Duarte Vieira, Mirian Peixoto Soares da Silva, Osvaldo Sebastião de Oliveira Filho and Marlene Evangelista Vieira
Stresses 2026, 6(3), 53; https://doi.org/10.3390/stresses6030053 - 3 Aug 2026
Abstract
The genus Euterpe, which includes açaí palm (Euterpe oleracea) and juçara palm (Euterpe edulis), plays an important socioeconomic and environmental role in Brazil. However, soil and water salinization is a global issue that compromises agricultural productivity by affecting [...] Read more.
The genus Euterpe, which includes açaí palm (Euterpe oleracea) and juçara palm (Euterpe edulis), plays an important socioeconomic and environmental role in Brazil. However, soil and water salinization is a global issue that compromises agricultural productivity by affecting plant physiological and metabolic processes. This study aimed to evaluate the physiological responses of young açaí and juçara plants under salt stress. The experiment was conducted in a randomized complete block design in a 5 × 2 factorial arrangement, consisting of five irrigation water salinity levels (0.1, 1.0, 2.0, 3.0, and 5.0 dS m−1) and two Euterpe species (açaí and juçara), with four replicates. After 104 days of stress exposure, gas exchange, chlorophyll ‘a’ fluorescence, relative chlorophyll index (SPAD), and sodium, chloride, and phenolic compounds were evaluated. Increasing salinity caused linear reductions in the maximum quantum yield and potential photochemical efficiency of PSII, accompanied by an increase in F0/Fm, indicating impaired PSII photochemical performance and photoinhibition. Stomatal conductance and transpiration also decreased significantly with increasing salinity, with reductions of up to 41.33% and 35.48%, respectively, at the highest salinity level. Salt stress negatively affected the physiological performance of both palm species through stomatal limitation and reduced photosystem II efficiency. However, açaí plants exhibited greater tolerance to salt stress than juçara plants. Full article
(This article belongs to the Section Plant and Photoautotrophic Stresses)
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18 pages, 905 KB  
Article
Comprehensive Evaluation of Salt Tolerance of Processing Tomato Germplasms at Seedling Stage
by Mingya Zhang, Mingqiang Su, Yudong Liu, Huiying Liu, Wei Xu, Xinting Yang and Shengqun Pang
Horticulturae 2026, 12(8), 946; https://doi.org/10.3390/horticulturae12080946 - 1 Aug 2026
Viewed by 148
Abstract
Soil salinization constitutes a major abiotic constraint limiting global crop productivity, and breeding salt-tolerant cultivars represents a pivotal strategy to addressing this challenge. In this study, 50 processing tomato genotypes with diverse genetic backgrounds were cultivated hydroponically in Hoagland nutrient solution and subjected [...] Read more.
Soil salinization constitutes a major abiotic constraint limiting global crop productivity, and breeding salt-tolerant cultivars represents a pivotal strategy to addressing this challenge. In this study, 50 processing tomato genotypes with diverse genetic backgrounds were cultivated hydroponically in Hoagland nutrient solution and subjected to either 0 (control) or 150 mM NaCl at the four-leaf stage. Nine seedling traits, encompassing plant height, stem diameter, and antioxidant enzyme activities, were measured on the 9th day after treatment initiation. Comprehensive evaluation of salt tolerance was performed using principal component analysis (PCA), fuzzy membership function analysis, and cluster analysis. The coefficients of variation (CVs) for all measured traits ranged from 21.54% to 92.69%, with relative proline content exhibiting the highest CV (92.69%) and relative stem diameter showing the lowest (21.54%). Correlation analysis revealed a highly significant positive correlation between relative plant height and relative stem diameter, and a highly significant negative correlation between relative plant height and relative proline (Pro) content. PCA reduced the nine seedling traits to four principal components, which collectively accounted for 67.529% of the total variance. Based on the combined results of fuzzy membership function and cluster analyses, the 50 genotypes were classified into three distinct categories: highly salt-tolerant (six genotypes), moderately salt-tolerant (26 genotypes), and salt-sensitive (18 genotypes). These findings provide a theoretical foundation and valuable germplasm resources for breeding salt-tolerant processing tomato varieties. Full article
(This article belongs to the Section Biotic and Abiotic Stress)
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19 pages, 7085 KB  
Article
Integrated Physiological, Morphological, and Transcriptomic Analyses Reveal Salt Adaptation in Silverleaf Sunflower (Helianthus argophyllus Torrey and Gray)
by Weiwei Li, Xueqi Wang, Jiagang Li, Jiaying Sun, Zhiwei Xu, Yunhe Ling, Bo Song, Zhonghua Wang, Enshi Xiao, Chunlian Li and Bing Jing
Agronomy 2026, 16(15), 1458; https://doi.org/10.3390/agronomy16151458 - 31 Jul 2026
Viewed by 102
Abstract
Silverleaf sunflower (Helianthus argophyllus Torrey and Gray) is an important salt-tolerant wild species with potential for improving cultivated sunflower, but its tolerance mechanisms remain unclear. Here, we compared the morphological, physiological, and transcriptomic responses of H. annuus and H. argophyllus under salt [...] Read more.
Silverleaf sunflower (Helianthus argophyllus Torrey and Gray) is an important salt-tolerant wild species with potential for improving cultivated sunflower, but its tolerance mechanisms remain unclear. Here, we compared the morphological, physiological, and transcriptomic responses of H. annuus and H. argophyllus under salt stress. H. argophyllus showed higher salt tolerance, which was accompanied by reduced membrane damage and better maintenance of photosynthetic performance under salt stress. This enhanced tolerance may be associated with lower stomatal density, dense trichomes, and a thick wax coating. The reference genome of cultivated sunflower (Helianthus annuus) provides limited insight into H. argophyllus because of substantial genomic variance between the two genotypes. Therefore, we generated a high-quality reference transcriptome of H. argophyllus using Iso-Seq long-read sequencing, identifying 50,153 unique genes and capturing over 91% of the gene repertoire. In total, 205 H. argophyllus-specific genes and 475 “fusion genes” were identified in the H. argophyllus transcriptome. Transcriptome profiling of leaves and roots under control and salt-stress conditions revealed upregulation of H. argophyllus-specific aquaporin genes. Commonly upregulated genes in both tissues were enriched in salt stress-responsive pathways. Genes upregulated only in the roots were more closely related to primary responses to abiotic stresses, while genes showing opposite regulation between roots and leaves reflected tissue-specific responses to salt stress. This study provides physiological, morphological, and transcriptomic insights into H. argophyllus salt tolerance and offers valuable resources for sunflower research and breeding. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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19 pages, 2393 KB  
Article
In Vitro and In Vivo Evaluation of Pediococcus acidilactici Pedio6-1 for Purine Metabolism Modulation in Diet-Induced Obese Mice
by Haohua Fu, Hengjia Ni, Jianhui Wang, Tuo Leng, Shusong Wu, Pan Huang, Jianjun Li, Cimin Long and Yulong Yin
Microorganisms 2026, 14(8), 1677; https://doi.org/10.3390/microorganisms14081677 - 30 Jul 2026
Viewed by 185
Abstract
Gut lactic acid bacteria are emerging as potential targets for modulating host purine metabolism and alleviating hyperuricemia-related disorders. This study aimed to isolate purine-degrading lactic acid bacterial strains from porcine intestine and systematically evaluate their probiotic potential through both in vitro and in [...] Read more.
Gut lactic acid bacteria are emerging as potential targets for modulating host purine metabolism and alleviating hyperuricemia-related disorders. This study aimed to isolate purine-degrading lactic acid bacterial strains from porcine intestine and systematically evaluate their probiotic potential through both in vitro and in vivo approaches. A strain designated Pedio6-1 was isolated and identified as Pediococcus acidilactici based on 16S rRNA sequencing. In vitro assays demonstrated that P. acidilactici Pedio6-1 exhibited nearly complete adenine clearance (approaching 100%) and a total purine clearance rate of 30.73%, along with strong tolerance to acidic conditions, bile salts, and gastrointestinal enzymes. To further assess its in vivo efficacy, a high-fat diet-induced obese mouse model was employed. After 8 weeks of intervention, Pedio6-1 supplementation significantly reduced the final body weight and liver index, and markedly decreased hepatic guanine levels (p < 0.05), with a trend toward lower total purine content compared to the obese control group. Mechanistically, Pedio6-1 treatment significantly downregulated the hepatic mRNA expression of pro-inflammatory cytokines IL-1β and TLR4 (p < 0.05). Serum untargeted metabolomics revealed that Pedio6-1 treatment shifted the metabolic profile toward that of normal diet-fed mice, with differential pathways predominantly enriched in porphyrin metabolism and amino acid biosynthesis and metabolism. Notably, key metabolites with antioxidant and metabolic regulatory functions, including bilirubin, biliverdin, glutathione, citrate, L-cystathionine, and 4-pyridoxic acid, were significantly elevated following treatment, while N-acetylornithine and methylmalonate ester were decreased, indicating coordinated remodeling of oxidative stress defense, vitamin B6 homeostasis, and energy metabolism. Collectively, these findings indicate that Pedio6-1 not only possesses direct purine-degrading activity in vitro, but also ameliorates purine metabolic disturbances, inflammation, and oxidative stress in obese mice, likely through the modulation of porphyrin and amino acid metabolic pathways, highlighting its promise as a functional probiotic candidate for managing obesity-associated purine metabolic disorders. Full article
(This article belongs to the Section Antimicrobial Agents and Resistance)
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21 pages, 2669 KB  
Article
Fungal Endophytes Are Associated with Improved Salinity Responses Across Quinoa Ecotypes
by Roberto Miño, Gabriel I. Ballesteros, Bárbara E. Valenzuela-Hormazábal, Ricardo Cabeza, Karina B. Ruiz, Karen Balboa-Silva and Marco A. Molina-Montenegro
Plants 2026, 15(15), 2356; https://doi.org/10.3390/plants15152356 - 30 Jul 2026
Viewed by 161
Abstract
Soil salinity is a major constraint on global crop productivity, highlighting the importance of strategies to enhance plant stress tolerance. This study investigated whether root-associated fungal endophytes derived from a salt-tolerant quinoa ecotype could establish associations with a salt-sensitive ecotype and confer systemic [...] Read more.
Soil salinity is a major constraint on global crop productivity, highlighting the importance of strategies to enhance plant stress tolerance. This study investigated whether root-associated fungal endophytes derived from a salt-tolerant quinoa ecotype could establish associations with a salt-sensitive ecotype and confer systemic physiological and molecular stress-mitigation responses. Fungal endophytes—two Alternaria spp. and one Setophoma sp.—were isolated from roots of Pandela (salt-tolerant genotype) and inoculated BO75 (salt-sensitive ecotype) under severe salt stress (400 mM NaCl). Physiological (potential photochemical efficiency, survival), biochemical (malondialdehyde, proline), molecular (expression of ion transporter genes CqSOS1 and CqNHX1), and elemental (Na+, K+, Cl distribution by μ-XRF) responses were evaluated. In the salt-sensitive BO75 genotype, endophyte inoculation was associated with improved stress performance, evidenced by reduced oxidative damage (lower MDA), higher proline accumulation, and enhanced photochemical efficiency. Furthermore, the reduced expression of CqSOS1 and CqNHX1 suggests an improved ionic balance in inoculated plants. Conversely, re-inoculating Pandela yielded negligible effects, suggesting that these endophytes primarily benefit genotypes lacking inherent salt tolerance. These findings indicate that transferring fungal endophytes from halophytic ecotypes can significantly mitigate stress in sensitive genotypes, highlighting their potential for enhancing crop resilience in saline environments. Full article
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44 pages, 1560 KB  
Review
Ethnomedicinal Uses, Phytochemistry and Bioactivities of Halophytes and Salt-Tolerant Plants with Potential Against Metabolic Syndrome: A Comprehensive Review
by Maria João Rodrigues, Pedro García-Caparrós, Catarina Guerreiro Pereira, Christian Magné, Karim Ben Hamed, Mariana Laundry de Mesquita and Luísa Custódio
Mar. Drugs 2026, 24(8), 262; https://doi.org/10.3390/md24080262 - 29 Jul 2026
Viewed by 450
Abstract
Metabolic syndrome (MetS) is a complex cluster of interconnected metabolic abnormalities, including central obesity, insulin resistance, dyslipidemia, hypertension, chronic inflammation, and impaired glucose metabolism, which collectively increase the risk of type 2 diabetes and cardiovascular diseases. Although current therapeutic strategies, including lifestyle interventions [...] Read more.
Metabolic syndrome (MetS) is a complex cluster of interconnected metabolic abnormalities, including central obesity, insulin resistance, dyslipidemia, hypertension, chronic inflammation, and impaired glucose metabolism, which collectively increase the risk of type 2 diabetes and cardiovascular diseases. Although current therapeutic strategies, including lifestyle interventions and pharmacological treatments, can be effective in managing specific MetS components, the multifactorial nature of this condition continues to encourage the search for complementary approaches and novel bioactive compounds. Salt-tolerant plants (STPs), particularly halophytes, survive under adverse saline and oxidative stress conditions through specialized physiological and biochemical adaptations, including the production of diverse secondary metabolites such as phenolic acids, flavonoids, sterols, terpenoids and polysaccharides. Several of these compounds have been associated with health-promoting properties, including antioxidant, anti-inflammatory, antidiabetic, antihypertensive, lipid-modulating and cardioprotective effects. This review provides an integrated and critical overview of the ethnomedicinal uses, phytochemistry and bioactivities of STPs with potential relevance to MetS and its associated conditions, namely chronic inflammation, diabetes, hypertension, cardiovascular disorders, dyslipidemia and obesity. The review first introduces the main features of MetS and the relevance of STPs as bioresources, followed by a synthesis of ethnomedicinal uses related to MetS-associated disorders. It then discusses in vitro and in vivo evidence for selected species, extracts and compounds, including reported bioactive metabolites and proposed mechanisms of action when available. Finally, the most promising species, extracts and metabolites are highlighted, together with current limitations and future research needs regarding efficacy, safety, bioavailability, standardization and clinical relevance. Full article
(This article belongs to the Special Issue Bioprospecting of Marine Halophyte Plants)
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19 pages, 1564 KB  
Article
Genome Sequences of Three Enterococcus faecalis Strains (LAB1, LAB10, and LAB11) with Probiotic, Plant Growth-Promoting, and Nitrifying Properties
by Muiz Oluwatosin Akinyemi, Wahauwouélé Hermann Coulibaly, Tano Marie-Ange Sakia Mian, Paul-Alexandru Popescu, Bassey Ebenso and Hary Razafindralambo
Microorganisms 2026, 14(8), 1653; https://doi.org/10.3390/microorganisms14081653 - 29 Jul 2026
Viewed by 216
Abstract
Here we report the draft genome sequences of three Enterococcus faecalis strains, LAB1, LAB10, and LAB11, isolated from the pond water of a tilapia (Oreochromis niloticus) aquaculture farm at the University Nangui Abrogoua, Abidjan, Ivory Coast. These strains were previously characterised [...] Read more.
Here we report the draft genome sequences of three Enterococcus faecalis strains, LAB1, LAB10, and LAB11, isolated from the pond water of a tilapia (Oreochromis niloticus) aquaculture farm at the University Nangui Abrogoua, Abidjan, Ivory Coast. These strains were previously characterised for their probiotic, plant growth-promoting (PGP), and nitrifying properties. All three strains were assigned to sequence type ST19 by multilocus sequence typing (MLST). The draft genomes of LAB1, LAB10, and LAB11 consist of 34, 35, and 34 contigs, totalling 2.94 Mb each (GC content 37.40%). Prokka annotation predicted 2872, 2873, and 2875 protein-coding sequences (CDS) for LAB1, LAB10, and LAB11, respectively. Genomic screening revealed no vancomycin resistance genes; however, tet(M) and lsa(A) resistance determinants were identified in all three strains, located on a repUS43-type plasmid replicon. Fourteen virulence factor homologs conserved in the E. faecalis reference strain V583 were detected, including Ebp pili, gelatinase (gelE), Fsr quorum-sensing system, and capsule biosynthesis genes, but no cytolysin operon was identified. Genes associated with stress tolerance (katA, sodA), bile salt hydrolysis (cbh), siderophore transport (fepC, fhuD), and ethanolamine nitrogen metabolism (eutB/eutC) were identified in all three genomes. Pan-genome analysis with the E. faecalis reference strain revealed 551 core gene clusters and 279 gene clusters exclusive to the three aquaculture isolates. Despite their high genomic similarity, we report the three genomes as distinct isolates due to observed differences in their expressed phenotypic properties. These sequences provide a genomic resource supporting the development of multifunctional probiotic consortia for integrated aquaponic systems. Full article
(This article belongs to the Special Issue Beneficial Microorganisms for Sustainable Agriculture)
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20 pages, 1484 KB  
Article
Osmopriming, Halopriming, and Chemopriming Differentially Modulate Stress Tolerance in Solanum lycopersicum Seeds Under Salinity and Iron Toxicity
by Anny Nogueira Fraga, Josinei Rodrigues Filho, Marina Reis Pires, Viviana Borges Corte and Hildegardo Seibert França
Seeds 2026, 5(4), 43; https://doi.org/10.3390/seeds5040043 - 29 Jul 2026
Viewed by 129
Abstract
Solanum lycopersicum L. (tomato) is an economically and nutritionally important crop whose germination and early seedling growth are highly sensitive to abiotic stresses that disrupt physiological processes and intensify oxidative damage. Seed priming has emerged as a low-cost physiological preconditioning strategy to enhance [...] Read more.
Solanum lycopersicum L. (tomato) is an economically and nutritionally important crop whose germination and early seedling growth are highly sensitive to abiotic stresses that disrupt physiological processes and intensify oxidative damage. Seed priming has emerged as a low-cost physiological preconditioning strategy to enhance stress tolerance by activating repair and defense mechanisms prior to stress exposure. This study evaluated the effects of osmopriming (PEG 6000), halopriming (KNO3), and chemopriming (SNP) on germination, early seedling growth, antioxidant enzyme activity, and lipid peroxidation in S. lycopersicum under salt stress and iron toxicity. Salt stress was induced with NaCl (100 mM) and iron toxicity with Fe-EDTA (4 mM). Priming treatments included osmopriming with PEG 6000 (−0.4 and −0.8 MPa), halopriming with KNO3 (25 and 50 mM), and chemopriming with sodium nitroprusside—SNP (0.1 and 0.2 mM). Under salt stress, NaCl (100 mM) completely inhibited germination and increased CAT activity by approximately 49% and POX activity by 4%; however, this antioxidant response was insufficient to reduce MDA content, which remained approximately 58% higher than the control. Under iron toxicity, Fe-EDTA (4 mM) reduced germination to 79% and caused a 425% increase in MDA content relative to the control, indicating severe oxidative damage despite a 59% increase in CAT and 47% increase in POX activities. Among the priming treatments evaluated, halopriming with KNO3 (50 mM) was the most effective strategy under salt stress, restoring germination to 81%, increasing CAT activity by 103%, and reducing MDA by 18% relative to non-primed salt-stressed seeds. Under iron toxicity, all priming treatments consistently increased antioxidant enzyme activities; however, none were capable of reducing lipid peroxidation or restoring seedling growth to control levels, likely due to continuous ROS generation via Fenton-type reactions that overwhelmed enzymatic detoxification capacity. Full article
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23 pages, 14309 KB  
Article
Development of Salt and Drought Tolerance Classification in the Kazakhstan Cotton Collection Using Optimal Phenotypic Traits
by Aisulu Orken, Nurbek Zhumabay, Nazerke Amangeldyeva, Malika Ramazanova, Sabir Makhmadjanov, Laura Tokhetova, Shuga Manabayeva and Dilnur Tussipkan
Int. J. Plant Biol. 2026, 17(8), 65; https://doi.org/10.3390/ijpb17080065 - 28 Jul 2026
Viewed by 195
Abstract
In arid and semi-arid regions, salinity and drought limit cotton productivity. As the northernmost cotton-growing country, Kazakhstan often deals with these issues. The objective of this study was to classify salt- and drought-tolerant groups within the Kazakhstan cotton collection based on key phenotypic [...] Read more.
In arid and semi-arid regions, salinity and drought limit cotton productivity. As the northernmost cotton-growing country, Kazakhstan often deals with these issues. The objective of this study was to classify salt- and drought-tolerant groups within the Kazakhstan cotton collection based on key phenotypic traits. Fifty-six Gossypium hirsutum genotypes were evaluated under controlled conditions using NaCl and PEG-6000. Six morphophysiological traits, including germination rate, plant height, fresh weight, root dry weight, and relative water content, were analyzed. Increasing NaCl and PEG levels reduced vegetative growth, while germination remained relatively stable under moderate stress. Regression analysis identified 200 mM NaCl as the optimal salinity level for salt tolerance and 20–30% PEG as the optimal level for drought tolerance. Cluster analysis using membership function values grouped the genotypes into five tolerance categories. Eight lines including M-4016-6, M-4031-8, M-4014-6, M-4029-9, M-4016-7, M-4016-8, M-4020-2, and M-4016-4 exhibited high tolerance to both stresses. Additional lines exhibited combined tolerance, indicating strong breeding potential. Principal component analysis revealed an inverse relationship between salt and drought tolerance, suggesting stress-specific adaptation. This study is the first to report on the development of a classification system for salt and drought tolerance in the Kazakhstan Cotton Collection. The results demonstrate substantial genetic variability and highlight the potential for developing cotton cultivars adapted environments prone to stress. Full article
(This article belongs to the Section Plant Response to Stresses)
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Article
Physiological and Molecular Resistance Mechanisms of Root Systems in Six Poplar Species Under Salt Stress
by Jia-Hui Meng, Wen-Teng Zuo, Lei Rao, Kang-Ping Liao, Hong-Chao Liu, Liu-Qiang Wang and Ting-Ting Sun
Forests 2026, 17(8), 877; https://doi.org/10.3390/f17080877 - 28 Jul 2026
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Abstract
Salt stress significantly constrains plant growth and development, with the root system serving as the primary organ for sensing and responding to salinity. Poplar (Populus spp.), a widely cultivated tree species, plays important roles in urban greening, windbreaks and sand fixation, and [...] Read more.
Salt stress significantly constrains plant growth and development, with the root system serving as the primary organ for sensing and responding to salinity. Poplar (Populus spp.), a widely cultivated tree species, plays important roles in urban greening, windbreaks and sand fixation, and various economic sectors. In this study, we conducted a comparative analysis of the salt tolerance of root systems of six different poplar cultivars. Key physiological indicators—including root activity, ion homeostasis, reactive oxygen species (ROS)-scavenging capacity, and nitric oxide (NO) content—were evaluated under saline conditions. Our findings indicate that the salt resistance of the six cultivars follows the order: P. simonii > P. cathayana > P. tremula × P. alba ‘717’ > P. deltoides × P. euramericana ‘Nanlin 895’ > P. deltoides × P. euramericana ‘Bofeng 3’ > P. alba × P. glandulosa ‘84K’. Furthermore, a transcriptomic analysis was performed on the most resilient species, P. simonii. These results reveal that P. simonii primarily orchestrates its salt stress response through the modulation of MAPK cascades and nitrogen metabolism pathways. This research provides theoretical support for elucidating the molecular mechanisms underlying the salt stress response in poplars and offers a foundation for the molecular breeding of salt tolerant poplar varieties. Full article
(This article belongs to the Section Forest Ecophysiology and Biology)
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