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Keywords = rice disease classification

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21 pages, 7677 KiB  
Article
Hyperspectral Imaging Combined with a Dual-Channel Feature Fusion Model for Hierarchical Detection of Rice Blast
by Yuan Qi, Tan Liu, Songlin Guo, Peiyan Wu, Jun Ma, Qingyun Yuan, Weixiang Yao and Tongyu Xu
Agriculture 2025, 15(15), 1673; https://doi.org/10.3390/agriculture15151673 - 2 Aug 2025
Viewed by 260
Abstract
Rice blast caused by Magnaporthe oryzae is a major cause of yield reductions and quality deterioration in rice. Therefore, early detection of the disease is necessary for controlling the spread of rice blast. This study proposed a dual-channel feature fusion model (DCFM) to [...] Read more.
Rice blast caused by Magnaporthe oryzae is a major cause of yield reductions and quality deterioration in rice. Therefore, early detection of the disease is necessary for controlling the spread of rice blast. This study proposed a dual-channel feature fusion model (DCFM) to achieve effective identification of rice blast. The DCFM model extracted spectral features using successive projection algorithm (SPA), random frog (RFrog), and competitive adaptive reweighted sampling (CARS), and extracted spatial features from spectral images using MobileNetV2 combined with the convolutional block attention module (CBAM). Then, these features were fused using the feature fusion adaptive conditioning module in DCFM and input into the fully connected layer for disease identification. The results show that the model combining spectral and spatial features was superior to the classification models based on single features for rice blast detection, with OA and Kappa higher than 90% and 88%, respectively. The DCFM model based on SPA screening obtained the best results, with an OA of 96.72% and a Kappa of 95.97%. Overall, this study enables the early and accurate identification of rice blast, providing a rapid and reliable method for rice disease monitoring and management. It also offers a valuable reference for the detection of other crop diseases. Full article
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46 pages, 1120 KiB  
Review
From Morphology to Multi-Omics: A New Age of Fusarium Research
by Collins Bugingo, Alessandro Infantino, Paul Okello, Oscar Perez-Hernandez, Kristina Petrović, Andéole Niyongabo Turatsinze and Swarnalatha Moparthi
Pathogens 2025, 14(8), 762; https://doi.org/10.3390/pathogens14080762 - 1 Aug 2025
Viewed by 411
Abstract
The Fusarium genus includes some of the most economically and ecologically impactful fungal pathogens affecting global agriculture and human health. Over the past 15 years, rapid advances in molecular biology, genomics, and diagnostic technologies have reshaped our understanding of Fusarium taxonomy, host–pathogen dynamics, [...] Read more.
The Fusarium genus includes some of the most economically and ecologically impactful fungal pathogens affecting global agriculture and human health. Over the past 15 years, rapid advances in molecular biology, genomics, and diagnostic technologies have reshaped our understanding of Fusarium taxonomy, host–pathogen dynamics, mycotoxin biosynthesis, and disease management. This review synthesizes key developments in these areas, focusing on agriculturally important Fusarium species complexes such as the Fusarium oxysporum species complex (FOSC), Fusarium graminearum species complex (FGSC), and a discussion on emerging lineages such as Neocosmospora. We explore recent shifts in species delimitation, functional genomics, and the molecular architecture of pathogenicity. In addition, we examine the global burden of Fusarium-induced mycotoxins by examining their prevalence in three of the world’s most widely consumed staple crops: maize, wheat, and rice. Last, we also evaluate contemporary management strategies, including molecular diagnostics, host resistance, and integrated disease control, positioning this review as a roadmap for future research and practical solutions in Fusarium-related disease and mycotoxin management. By weaving together morphological insights and cutting-edge multi-omics tools, this review captures the transition into a new era of Fusarium research where integrated, high-resolution approaches are transforming diagnosis, classification, and management. Full article
(This article belongs to the Special Issue Current Research on Fusarium: 2nd Edition)
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19 pages, 3076 KiB  
Article
Federated Learning for Heterogeneous Multi-Site Crop Disease Diagnosis
by Wesley Chorney, Abdur Rahman, Yibin Wang, Haifeng Wang and Zhaohua Peng
Mathematics 2025, 13(9), 1401; https://doi.org/10.3390/math13091401 - 25 Apr 2025
Viewed by 902
Abstract
Crop diseases can significantly impact crop growth and production, often leading to a severe economic burden for rice farmers. These diseases can spread rapidly over large areas, making it challenging for farmers to detect and manage them effectively and promptly. Automated methods for [...] Read more.
Crop diseases can significantly impact crop growth and production, often leading to a severe economic burden for rice farmers. These diseases can spread rapidly over large areas, making it challenging for farmers to detect and manage them effectively and promptly. Automated methods for disease classification emerge as promising approaches for detecting and managing these diseases, provided there are sufficient data. Sharing data among farms could facilitate the development of a strong classifier, but it must be executed properly to prevent leaking sensitive information. In this study, we demonstrate how farms with vastly different datasets can collaborate through a federated learning model. The objective of this collaboration is to create a classifier that every farm can use to detect and manage rice crop diseases by leveraging data sharing while safeguarding data privacy. We underscore the significance of data sharing and model architecture in developing a robust centralized classifier, which can effectively classify multiple diseases (and a healthy state) with 83.24% accuracy, 84.24% precision, 83.24% recall, and an 82.28% F1 score. In addition, we demonstrate the importance of model design on classification outcomes. The proposed collaborative learning method not only preserves data privacy but also offers a cost-effective and communication-efficient lightweight solution for rice crop disease detection. Furthermore, this collaborative strategy can be extended to other crop disease classification tasks. Full article
(This article belongs to the Special Issue Computational Intelligence in Addressing Data Heterogeneity)
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18 pages, 5095 KiB  
Article
FPGA-Based Low-Power High-Performance CNN Accelerator Integrating DIST for Rice Leaf Disease Classification
by Jingwen Zheng, Zefei Lv, Dayang Li, Chengbo Lu, Yang Zhang, Liangzun Fu, Xiwei Huang, Jiye Huang, Dongmei Chen and Jingcheng Zhang
Electronics 2025, 14(9), 1704; https://doi.org/10.3390/electronics14091704 - 22 Apr 2025
Cited by 1 | Viewed by 1106
Abstract
Agricultural pest and disease monitoring has recently become a crucial aspect of modern agriculture. Toward this end, this study investigates methodologies for implementing low-power, high-performance convolutional neural networks (CNNs) on agricultural edge detection devices. Recognizing the potential of field-programmable gate arrays (FPGAs) to [...] Read more.
Agricultural pest and disease monitoring has recently become a crucial aspect of modern agriculture. Toward this end, this study investigates methodologies for implementing low-power, high-performance convolutional neural networks (CNNs) on agricultural edge detection devices. Recognizing the potential of field-programmable gate arrays (FPGAs) to enhance inference parallelism, we leveraged their computational capabilities and intensive storage to propose an embedded FPGA-based CNN accelerator design aimed at optimizing rice leaf disease image classification. Additionally, we trained the MobileNetV2 network using multimodal image data and employed knowledge distillation from a stronger teacher (DIST) as the hardware benchmark. The solution was deployed on the ZYNQ-AC7Z020 hardware platform using High-Level Synthesis (HLS) design tools. Through a combination of fine-grained pipelining, matrix blocking, and linear buffering optimizations, the proposed system achieved a power consumption of 3.21 W, an accuracy of 97.41%, and an inference speed of 43 ms per frame, making it a practical solution for edge-based rice leaf disease classification. Full article
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22 pages, 8390 KiB  
Article
Dual-Attention-Enhanced MobileViT Network: A Lightweight Model for Rice Disease Identification in Field-Captured Images
by Meng Zhang, Zichao Lin, Shuqi Tang, Chenjie Lin, Liping Zhang, Wei Dong and Nan Zhong
Agriculture 2025, 15(6), 571; https://doi.org/10.3390/agriculture15060571 - 7 Mar 2025
Cited by 3 | Viewed by 1244
Abstract
Accurate identification of rice diseases is crucial for improving rice yield and ensuring food security. In this study, we constructed an image dataset containing six classes of rice diseases captured under real field conditions to address challenges such as complex backgrounds, varying lighting, [...] Read more.
Accurate identification of rice diseases is crucial for improving rice yield and ensuring food security. In this study, we constructed an image dataset containing six classes of rice diseases captured under real field conditions to address challenges such as complex backgrounds, varying lighting, and symptom similarities. Based on the MobileViT-XXS architecture, we proposed an enhanced model named MobileViT-DAP, which integrates Channel Attention (CA), Efficient Channel Attention (ECA), and PoolFormer blocks to achieve precise classification of rice diseases. The experimental results demonstrated that the improved model achieved superior performance with 0.75 M Params and 0.23 G FLOPs, ensuring computational efficiency while maintaining high classification accuracy. On the testing set, the model achieved an accuracy of 99.61%, a precision of 99.64%, a recall of 99.59%, and a specificity of 99.92%. Compared to traditional lightweight models, MobileViT-DAP showed significant improvements in model complexity, computational efficiency, and classification performance, effectively balancing lightweight design with high accuracy. Furthermore, visualization analysis confirmed that the model’s decision-making process primarily relies on lesion-related features, enhancing its interpretability and reliability. This study provides a novel perspective for optimizing plant disease recognition tasks and contributes to improving plant protection strategies, offering a solution for accurate and efficient disease monitoring in agricultural applications. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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21 pages, 5173 KiB  
Article
Hyperspectral Imaging and Machine Learning for Diagnosing Rice Bacterial Blight Symptoms Caused by Xanthomonas oryzae pv. oryzae, Pantoea ananatis and Enterobacter asburiae
by Meng Zhang, Shuqi Tang, Chenjie Lin, Zichao Lin, Liping Zhang, Wei Dong and Nan Zhong
Plants 2025, 14(5), 733; https://doi.org/10.3390/plants14050733 - 27 Feb 2025
Cited by 1 | Viewed by 926
Abstract
In rice, infections caused by Pantoea ananatis or Enterobacter asburiae closely resemble the bacterial blight induced by Xanthomonas oryzae pv. oryzae, yet they differ in drug resistance and management strategies. This study explores the potential of combining hyperspectral imaging (HSI) with machine [...] Read more.
In rice, infections caused by Pantoea ananatis or Enterobacter asburiae closely resemble the bacterial blight induced by Xanthomonas oryzae pv. oryzae, yet they differ in drug resistance and management strategies. This study explores the potential of combining hyperspectral imaging (HSI) with machine learning for the rapid and accurate detection of rice bacterial blight symptoms caused by various pathogens. One-dimensional convolutional neural networks (1DCNNs) were employed to construct a classification model, integrating various spectral preprocessing techniques and feature selection algorithms for comparison. To enhance model robustness and mitigate overfitting due to limited spectral samples, generative adversarial networks (GANs) were utilized to augment the dataset. The results indicated that the 1DCNN model, after feature selection using uninformative variable elimination (UVE), achieved an accuracy of 86.11% and an F1 score of 0.8625 on the five-class dataset. However, the dominance of Pantoea ananatis in mixed bacterial samples negatively impacted classification performance. After removing mixed-infection samples, the model attained an accuracy of 97.06% and an F1 score of 0.9703 on the four-class dataset, demonstrating high classification accuracy across different pathogen-induced infections. Key spectral bands were identified at 420–490 nm, 610–670 nm, 780–850 nm, and 910–940 nm, facilitating pathogen differentiation. This study presents a precise, non-destructive approach to plant disease detection, offering valuable insights into disease prevention and management in precision agriculture. Full article
(This article belongs to the Section Plant Modeling)
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33 pages, 724 KiB  
Review
A Review of the Mycotoxin Family of Fumonisins, Their Biosynthesis, Metabolism, Methods of Detection and Effects on Humans and Animals
by Christian Kosisochukwu Anumudu, Chiemerie T. Ekwueme, Chijioke Christopher Uhegwu, Chisom Ejileugha, Jennifer Augustine, Chioke Amaefuna Okolo and Helen Onyeaka
Int. J. Mol. Sci. 2025, 26(1), 184; https://doi.org/10.3390/ijms26010184 - 28 Dec 2024
Cited by 4 | Viewed by 3121
Abstract
Fumonisins, a class of mycotoxins predominantly produced by Fusarium species, represent a major threat to food safety and public health due to their widespread occurrence in staple crops including peanuts, wine, rice, sorghum, and mainly in maize and maize-based food and feed products. [...] Read more.
Fumonisins, a class of mycotoxins predominantly produced by Fusarium species, represent a major threat to food safety and public health due to their widespread occurrence in staple crops including peanuts, wine, rice, sorghum, and mainly in maize and maize-based food and feed products. Although fumonisins occur in different groups, the fumonisin B series, particularly fumonisin B1 (FB1) and fumonisin B2 (FB2), are the most prevalent and toxic in this group of mycotoxins and are of public health significance due to the many debilitating human and animal diseases and mycotoxicosis they cause and their classification as by the International Agency for Research on Cancer (IARC) as a class 2B carcinogen (probable human carcinogen). This has made them one of the most regulated mycotoxins, with stringent regulatory limits on their levels in food and feeds destined for human and animal consumption, especially maize and maize-based products. Numerous countries have regulations on levels of fumonisins in foods and feeds that are intended to protect human and animal health. However, there are still gaps in knowledge, especially with regards to the molecular mechanisms underlying fumonisin-induced toxicity and their full impact on human health. Detection of fumonisins has been advanced through various methods, with immunological approaches such as Enzyme-Linked Immuno-Sorbent Assay (ELISA) and lateral flow immunoassays being widely used for their simplicity and adaptability. However, these methods face challenges such as cross-reactivity and matrix interference, necessitating the need for continued development of more sensitive and specific detection techniques. Chromatographic methods, including HPLC-FLD, are also employed in fumonisin analysis but require meticulous sample preparation and derivitization due to the low UV absorbance of fumonisins. This review provides a comprehensive overview of the fumonisin family, focusing on their biosynthesis, occurrence, toxicological effects, and levels of contamination found in foods and the factors affecting their presence. It also critically evaluates the current methods for fumonisin detection and quantification, including chromatographic techniques and immunological approaches such as ELISA and lateral flow immunoassays, highlighting the challenges associated with fumonisin detection in complex food matrices and emphasizing the need for more sensitive, rapid, and cost-effective detection methods. Full article
(This article belongs to the Special Issue Mycotoxins and Food Toxicology)
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14 pages, 1424 KiB  
Article
Rice Disease Classification Using a Stacked Ensemble of Deep Convolutional Neural Networks
by Zhibin Wang, Yana Wei, Cuixia Mu, Yunhe Zhang and Xiaojun Qiao
Sustainability 2025, 17(1), 124; https://doi.org/10.3390/su17010124 - 27 Dec 2024
Cited by 2 | Viewed by 1275
Abstract
Rice is a staple food for almost half of the world’s population, and the stability and sustainability of rice production plays a decisive role in food security. Diseases are a major cause of loss in rice crops. The timely discovery and control of [...] Read more.
Rice is a staple food for almost half of the world’s population, and the stability and sustainability of rice production plays a decisive role in food security. Diseases are a major cause of loss in rice crops. The timely discovery and control of diseases are important in reducing the use of pesticides, protecting the agricultural eco-environment, and improving the yield and quality of rice crops. Deep convolutional neural networks (DCNNs) have achieved great success in disease image classification. However, most models have complex network structures that frequently cause problems, such as redundant network parameters, low training efficiency, and high computational costs. To address this issue and improve the accuracy of rice disease classification, a lightweight deep convolutional neural network (DCNN) ensemble method for rice disease classification is proposed. First, a new lightweight DCNN model (called CG-EfficientNet), which is based on an attention mechanism and EfficientNet, was designed as the base learner. Second, CG-EfficientNet models with different optimization algorithms and network parameters were trained on rice disease datasets to generate seven different CG-EfficientNets, and a resampling strategy was used to enhance the diversity of the individual models. Then, the sequential least squares programming algorithm was used to calculate the weight of each base model. Finally, logistic regression was used as the meta-classifier for stacking. To verify the effectiveness, classification experiments were performed on five classes of rice tissue images: rice bacterial blight, rice kernel smut, rice false smut, rice brown spot, and healthy leaves. The accuracy of the proposed method was 96.10%, which is higher than the results of the classic CNN models VGG16, InceptionV3, ResNet101, and DenseNet201 and four integration methods. The experimental results show that the proposed method is not only capable of accurately identifying rice diseases but is also computationally efficient. Full article
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16 pages, 2595 KiB  
Article
New Hyperspectral Geometry Ratio Index for Monitoring Rice Blast Disease from Leaf Scale to Canopy Scale
by Qiong Zheng, Yihao Chen, Qing Xia, Yunfei Zhang, Dan Li, Hao Jiang, Chongyang Wang, Longlong Zhao, Wenjiang Huang, Yingying Dong and Chuntao Wang
Remote Sens. 2024, 16(24), 4681; https://doi.org/10.3390/rs16244681 - 15 Dec 2024
Cited by 1 | Viewed by 1184
Abstract
Rice blast is a highly damaging disease that greatly impacts both the quality and yield of rice. Timely identification and monitoring of this disease are essential for effective agricultural management and for ensuring optimal crop performance. The spectral vegetation index has been widely [...] Read more.
Rice blast is a highly damaging disease that greatly impacts both the quality and yield of rice. Timely identification and monitoring of this disease are essential for effective agricultural management and for ensuring optimal crop performance. The spectral vegetation index has been widely used in the identification of crop diseases. However, a limitation of these indices is that they cannot identify diseases at different scales. This study aimed to address these issues by developing the rice blast-specific hyperspectral Geometry Ratio Vegetation Index (GRVIRB) for monitoring rice blast disease at the leaf and canopy scales. The sensitive bands for identifying rice blast disease were 688 nm, 756 nm, and 1466 nm using the successive projection algorithm. Based on these three sensitive bands and the spectral response mechanism of rice blast, the GRVIRB was designed. GRVIRB demonstrated high classification accuracy using SVM (support vector machine) and LDA (Linear Discriminant Analysis) models in leaf-scale and canopy-scale datasets from 2020 and 2021, surpassing the current vegetation indices of rice blast detection. It is demonstrated that the GRVIRB has excellent robustness and universality for rice blast detection from leaf to canopy scales in different years. Additionally, the research suggests that the new hyperspectral vegetation index can serve as a valuable reference for studies conducted at both unmanned aerial vehicle and satellite scales. Full article
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15 pages, 18517 KiB  
Article
Rice Leaf Disease Classification—A Comparative Approach Using Convolutional Neural Network (CNN), Cascading Autoencoder with Attention Residual U-Net (CAAR-U-Net), and MobileNet-V2 Architectures
by Monoronjon Dutta, Md Rashedul Islam Sujan, Mayen Uddin Mojumdar, Narayan Ranjan Chakraborty, Ahmed Al Marouf, Jon G. Rokne and Reda Alhajj
Technologies 2024, 12(11), 214; https://doi.org/10.3390/technologies12110214 - 29 Oct 2024
Cited by 13 | Viewed by 5982
Abstract
Classifying rice leaf diseases in agricultural technology helps to maintain crop health and to ensure a good yield. In this work, deep learning algorithms were, therefore, employed for the identification and classification of rice leaf diseases from images of crops in the field. [...] Read more.
Classifying rice leaf diseases in agricultural technology helps to maintain crop health and to ensure a good yield. In this work, deep learning algorithms were, therefore, employed for the identification and classification of rice leaf diseases from images of crops in the field. The initial algorithmic phase involved image pre-processing of the crop images, using a bilateral filter to improve image quality. The effectiveness of this step was measured by using metrics like the Structural Similarity Index (SSIM) and the Peak Signal-to-Noise Ratio (PSNR). Following this, this work employed advanced neural network architectures for classification, including Cascading Autoencoder with Attention Residual U-Net (CAAR-U-Net), MobileNetV2, and Convolutional Neural Network (CNN). The proposed CNN model stood out, since it demonstrated exceptional performance in identifying rice leaf diseases, with test Accuracy of 98% and high Precision, Recall, and F1 scores. This result highlights that the proposed model is particularly well suited for rice leaf disease classification. The robustness of the proposed model was validated through k-fold cross-validation, confirming its generalizability and minimizing the risk of overfitting. This study not only focused on classifying rice leaf diseases but also has the potential to benefit farmers and the agricultural community greatly. This work highlights the advantages of custom CNN models for efficient and accurate rice leaf disease classification, paving the way for technology-driven advancements in farming practices. Full article
(This article belongs to the Section Information and Communication Technologies)
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25 pages, 21534 KiB  
Article
An Improved Multi-Scale Feature Extraction Network for Rice Disease and Pest Recognition
by Pengtao Lv, Heliang Xu, Yana Zhang, Qinghui Zhang, Quan Pan, Yao Qin, Youyang Chen, Dengke Cao, Jingping Wang, Mengya Zhang and Cong Chen
Insects 2024, 15(11), 827; https://doi.org/10.3390/insects15110827 - 23 Oct 2024
Cited by 4 | Viewed by 1851
Abstract
In the process of rice production, rice pests are one of the main factors that cause rice yield reduction. To implement prevention and control measures, it is necessary to accurately identify the types of rice pests and diseases. However, the application of image [...] Read more.
In the process of rice production, rice pests are one of the main factors that cause rice yield reduction. To implement prevention and control measures, it is necessary to accurately identify the types of rice pests and diseases. However, the application of image recognition technologies focused on the agricultural field, especially in the field of rice disease and pest identification, is relatively limited. Existing research on rice diseases and pests has problems such as single data types, low data volume, and low recognition accuracy. Therefore, we constructed the rice pest and disease dataset (RPDD), which was expanded through data enhancement methods. Then, based on the ResNet structure and the convolutional attention mechanism module, we proposed a Lightweight Multi-scale Feature Extraction Network (LMN) to extract multi-scale features at a finer granularity. The proposed LMN model achieved an average classification accuracy of 95.38% and an F1-Score of 94.5% on the RPDD. The parameter size of the model is 1.4 M, and the FLOPs is 1.65 G. The results suggest that the LMN model performs rice disease and pest classification tasks more effectively than the baseline ResNet model by significantly reducing the model size and improving accuracy. Full article
(This article belongs to the Section Insect Pest and Vector Management)
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19 pages, 7421 KiB  
Article
Utilizing Convolutional Neural Networks for the Effective Classification of Rice Leaf Diseases Through a Deep Learning Approach
by Salma Akter, Rashadul Islam Sumon, Haider Ali and Hee-Cheol Kim
Electronics 2024, 13(20), 4095; https://doi.org/10.3390/electronics13204095 - 17 Oct 2024
Cited by 9 | Viewed by 3550
Abstract
Rice is the primary staple food in many Asian countries, and ensuring the quality of rice crops is vital for food security. Effective crop management depends on the early and precise detection of common rice diseases such as bacterial blight, blast, brown spot, [...] Read more.
Rice is the primary staple food in many Asian countries, and ensuring the quality of rice crops is vital for food security. Effective crop management depends on the early and precise detection of common rice diseases such as bacterial blight, blast, brown spot, and tungro. This work presents a convolutional neural network model for classifying rice leaf disease. Four distinct diseases, bacterial blight, blast, brown spot, and tungro, are the main targets of the model. Previously, leaf pathologies in crops were mostly identified manually using specialized equipment, which was time-consuming and inefficient. This study offers a remedy for accurately diagnosing and classifying rice leaf diseases through deep learning techniques. Using this dataset, the proposed CNN model was trained to identify complex patterns and attributes linked to each disease using its deep learning capabilities. This CNN model achieved an exceptional accuracy of 99.99%, surpassing the benchmarks set by existing state-of-the-art models. The proposed model can be a useful diagnostic and early warning system for rice leaf diseases. It could help farmers and other agricultural professionals reduce crop losses and enhance the quality of their yields. Full article
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20 pages, 3140 KiB  
Article
Detection of Rice Leaf SPAD and Blast Disease Using Integrated Aerial and Ground Multiscale Canopy Reflectance Spectroscopy
by Aichen Wang, Zishan Song, Yuwen Xie, Jin Hu, Liyuan Zhang and Qingzhen Zhu
Agriculture 2024, 14(9), 1471; https://doi.org/10.3390/agriculture14091471 - 28 Aug 2024
Cited by 3 | Viewed by 1845
Abstract
Rice blast disease is one of the major diseases affecting rice plant, significantly impacting both yield and quality. Current detecting methods for rice blast disease mainly rely on manual surveys in the field and laboratory tests, which are inefficient, inaccurate, and limited in [...] Read more.
Rice blast disease is one of the major diseases affecting rice plant, significantly impacting both yield and quality. Current detecting methods for rice blast disease mainly rely on manual surveys in the field and laboratory tests, which are inefficient, inaccurate, and limited in scale. Spectral and imaging technologies in the visible and near-infrared (Vis/NIR) region have been widely investigated for crop disease detection. This work explored the potential of integrating canopy reflectance spectra acquired near the ground and aerial multispectral images captured with an unmanned aerial vehicle (UAV) for estimating Soil-Plant Analysis Development (SPAD) values and detecting rice leaf blast disease in the field. Canopy reflectance spectra were preprocessed, followed by effective band selection. Different vegetation indices (VIs) were calculated from multispectral images and selected for model establishment according to their correlation with SPAD values and disease severity. The full-wavelength canopy spectra (450–850 nm) were first used for establishing SPAD inversion and blast disease classification models, demonstrating the effectiveness of Vis/NIR spectroscopy for SPAD inversion and blast disease detection. Then, selected effective bands from the canopy spectra, UAV VIs, and the fusion of the two data sources were used for establishing corresponding models. The results showed that all SPAD inversion models and disease classification models established with the integrated data performed better than corresponding models established with the single of either of the aerial and ground data sources. For SPAD inversion models, the best model based on a single data source achieved a validation determination coefficient (Rcv2) of 0.5719 and a validation root mean square error (RMSECV) of 2.8794, while after ground and aerial data fusion, these two values improved to 0.6476 and 2.6207, respectively. For blast disease classification models, the best model based on a single data source achieved an overall test accuracy of 89.01% and a Kappa coefficient of 0.86, and after data fusion, the two values improved to 96.37% and 0.95, respectively. These results indicated the significant potential of integrating canopy reflectance spectra and UAV multispectral images for detecting rice diseases in large fields. Full article
(This article belongs to the Special Issue Multi- and Hyper-Spectral Imaging Technologies for Crop Monitoring)
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19 pages, 2581 KiB  
Article
Deep Learning-Based Methods for Multi-Class Rice Disease Detection Using Plant Images
by Yuhai Li, Xiaoyan Chen, Lina Yin and Yue Hu
Agronomy 2024, 14(9), 1879; https://doi.org/10.3390/agronomy14091879 - 23 Aug 2024
Cited by 7 | Viewed by 5628
Abstract
Rapid and accurate diagnosis of rice diseases can prevent large-scale outbreaks and reduce pesticide overuse, thereby ensuring rice yield and quality. Existing research typically focuses on a limited number of rice diseases, which makes these studies less applicable to the diverse range of [...] Read more.
Rapid and accurate diagnosis of rice diseases can prevent large-scale outbreaks and reduce pesticide overuse, thereby ensuring rice yield and quality. Existing research typically focuses on a limited number of rice diseases, which makes these studies less applicable to the diverse range of diseases currently affecting rice. Consequently, these studies fail to meet the detection needs of agricultural workers. Additionally, the lack of discussion regarding advanced detection algorithms in current research makes it difficult to determine the optimal application solution. To address these limitations, this study constructs a multi-class rice disease dataset comprising eleven rice diseases and one healthy leaf class. The resulting model is more widely applicable to a variety of diseases. Additionally, we evaluated advanced detection networks and found that DenseNet emerged as the best-performing model with an accuracy of 95.7%, precision of 95.3%, recall of 94.8%, F1 score of 95.0%, and a parameter count of only 6.97 M. Considering the current interest in transfer learning, this study introduced pre-trained weights from the large-scale, multi-class ImageNet dataset into the experiments. Among the tested models, RegNet achieved the best comprehensive performance, with an accuracy of 96.8%, precision of 96.2%, recall of 95.9%, F1 score of 96.0%, and a parameter count of only 3.91 M. Based on the transfer learning-based RegNet model, we developed a rice disease identification app that provides a simple and efficient diagnosis of rice diseases. Full article
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18 pages, 7639 KiB  
Article
Improved Tunicate Swarm Optimization Based Hybrid Convolutional Neural Network for Classification of Leaf Diseases and Nutrient Deficiencies in Rice (Oryza)
by R. Sherline Jesie and M. S. Godwin Premi
Agronomy 2024, 14(8), 1851; https://doi.org/10.3390/agronomy14081851 - 21 Aug 2024
Cited by 2 | Viewed by 1403
Abstract
In Asia, rice is the most consumed grain by humans, serving as a staple food in India. The yield of rice paddies is easily affected by nutrient deficiencies and leaf diseases. To overcome this problem and improve the yield productivity of rice, nutrient [...] Read more.
In Asia, rice is the most consumed grain by humans, serving as a staple food in India. The yield of rice paddies is easily affected by nutrient deficiencies and leaf diseases. To overcome this problem and improve the yield productivity of rice, nutrient deficiency and leaf disease identification are essential. The main nutrient elements in paddies are potassium, phosphorus, and nitrogen (PPN), the deficiency of any of which strongly affects the rice plants. When multiple nutrient elements are deficient, the leaf color of the rice plants is altered. To overcome this problem, optimal nutrient delivery is required. Hence, the present study proposes the use of Fuzzy C Means clustering (FCM) with Improved Tunicate Swarm Optimization (ITSO) to segment the lesions in rice plant leaves and identify the deficient nutrients. The proposed ITSO integrates the Tunicate Swarm Optimization (TSO) and Bacterial Foraging Optimization (BFO) approaches. The Hybrid Convolutional Neural Network (HCNN), a deep learning model, is used with ITSO to classify the rice leaf diseases, as well as nutrient deficiencies in the leaves. Two datasets, namely, a field work dataset and a Kaggle dataset, were used for the present study. The proposed HCNN-ITSO classified Bacterial Leaf Bright (BLB), Narrow Brown Leaf Spot (NBLS), Sheath Rot (SR), Brown Spot (BS), and Leaf Smut (LS) in the field work dataset. Furthermore, the potassium-, phosphorus-, and nitrogen-deficiency-presenting leaves were classified using the proposed HCNN-ITSO in the Kaggle dataset. The MATLAB platform was used for experimental analysis in the field work and Kaggle datasets in terms of various performance measures. When compared to previous methods, the proposed method achieved the best accuracies of 98.8% and 99.01% in the field work and Kaggle datasets, respectively. Full article
(This article belongs to the Section Pest and Disease Management)
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