Search Results (52)

Background/Objectives: Spinal diffusion tensor imaging (sDTI) remains a challenging method for the selective evaluation of key anatomical structures, like pyramidal tracts (PTs) and dorsal columns (DCs), and for reliably quantifying diffusion metrics such as fractional anisotropy (FA), radial diffusivity (RD), mean diffusivity (MD), and axial diffusivity (AD). This prospective, single-center study aimed to assess the reproducibility, robustness, and reliability of an optimized axial sDTI protocol, specifically intended for long fiber tracts. Methods: We developed an optimized Stejskal–Tanner sequence for high-resolution, axial sDTI of the cervical spinal cord at 3.0 T. Using advanced standardized evaluation and post-processing methods, we estimated DTI values for PTs, DCs, and AHs at the level of the second cervical vertebra. Reliability was evaluated through repeated measurements in 16 healthy volunteers and by comparing results from two 3.0 T scanners (Magnetom Skyra and Magnetom Prisma, Siemens Healthineers, Erlangen, Germany). Reproducibility was assessed using paired t-tests, intraclass correlation coefficients (ICCs), Bland–Altman analysis, and coefficients of variation (CVs). Results: The optimized sDTI protocol demonstrated high consistency for FA between test–retest sessions and across scanners. For the Skyra, the DC region showed the highest reliability (average ICC = 0.858) followed by the PT region (average ICC = 0.789). On the Prisma, the PT region reached an average ICC of 0.854, with the DC region at 0.758. Pooled inter-scanner data indicated good-to-excellent agreement, particularly in the PT region (average ICC = 0.860). FA CVs remained low (<10%) across all regions and scanners. RD showed good-to-excellent ICC values for PTs and DCs (average ICC for Skyra 0.642 and 0.769 and 0.926 and 0.830 for Prisma, respectively) but showed a higher CV between 14.6 and 19.4% for these two scanners. Conclusions: Improved sDTI offers highly reproducible FA measurements for all metrics with scanner independence, supporting its potential as a robust tool for detecting and monitoring spinal cord pathologies. Full article

Oxidative stress, which contributes to neuronal cell dysfunction, is a critical factor in the pathogenesis of neurodegenerative diseases. Anthocyanins and α-tocopherol have shown potential in mitigating oxidative damage, and their combination may provide synergistic effects. This study investigated the combined effects of a cyanidin-3-glucoside (C3G)-enriched extract derived from Oryza sativa L. cv. RD83 and α-tocopherol (C3GE) on hydrogen peroxide (H₂O₂)-induced oxidative stress in SH-SY5Y cells. Cells were treated with C3GE during exposure to 200 µM H₂O₂. Cell viability, intracellular reactive oxygen species (ROS), and oxidative stress biomarkers, including the activities of superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GSH-Px), as well as malondialdehyde (MDA) levels, were evaluated. Protein expression levels of histone deacetylase 1 (HDAC1), nuclear factor erythroid 2 related factor 2 (Nrf2), heme oxygenase 1 (HO-1), and SOD1 were also assessed. The combined treatment markedly improved cell viability, suppressed ROS accumulation, enhanced antioxidant enzyme activities, and significantly reduced MDA levels, suggesting effective protection against oxidative damage. Mechanistically, C3GE downregulated HDAC1 expression while upregulating Nrf2, HO-1, and SOD1, indicating that its antioxidant and neuroprotective effects are mediated, at least in part, through epigenetic modulation of redox-related signaling pathways. These results demonstrate a synergistic interaction between C3G and α-tocopherol that enhances cellular antioxidant defenses and supports redox homeostasis. In conclusion, the C3GE combination offers a promising therapeutic approach for preventing or attenuating oxidative stress-induced neuronal injury, with potential relevance for the treatment of neurodegenerative disorders. Full article

The successful introduction of new cultivars depends on the evaluation of complex parameters essential for the consumers, market, and fruit producers. A new scab-resistant apple cultivar, ‘Wuranda’ (SQ159/Natyra^®/Magic Star^® × Honeycrisp), recently introduced in Norway and managed under the name Fryd^©, is prone to biennial bearing. Therefore, one of the first tasks, investigated in Southwestern Norway by the Norwegian Institute of Bioeconomy Research, NIBIO-Ullensvang in 2021–2024, was the establishment of optimal crop load level based on the combination of productivity, fruit quality, and return bloom. The apple cultivar Fryd (‘Wuranda’) was propagated on ‘M.9’ rootstock and planted in 2019. The trial was performed in the same orchard for four consecutive years, starting three years after planting. Crop load level affected average fruit mass but had no impact on cv. Fryd fruit quality parameters at harvest such as blush, ground color, firmness, soluble solid content, or starch degradation. Fruit size variation was diminished by crop load regulation, and most fruits fell into 2–3 grading classes. Crop load, not the yield per tree, was the determining factor for the return bloom. The optimal crop load level depended on the orchard age. To guarantee a regular bearing mode of cv. Fryd planted on M.9 rootstock at a 3.5 × 1 m distance and trained as slender spindle, crop load of 5.5–6 fruits cm⁻² TCSA (trunk cross-sectional area) in the 3rd year, 7.5–8 fruits cm⁻² TCSA in the 4th year, and 6.5–7 fruits cm⁻² TCSA in the 5th year should be maintained. Full article

Rice (Oryza sativa L.) is a staple food for billions of people globally. Rice cultivar RD43 has been recognized for its health benefits but has faced declining productivity due to climate change. Plant tissue culture serves as a powerful tool for studying and improving rice cultivars, yet a standardized protocol for rice cv. RD43 is lacking. This study aims to establish an efficient plant tissue culture protocol for rice cv. RD43 by evaluating concentrations of plant growth regulators for callus induction, proliferation, and regeneration. Callus induction was most effective with 4.0 mg/L of 2,4-dichlorophenoxyacetic acid (2,4-D), while callus proliferation was effective with 2.0 mg/L of 2,4-D. Furthermore, 2.0 mg/L of 6-benzyladenine (BA) yielded the highest plant regeneration, achieving a 50% regeneration rate and producing 9.60 shoots per callus. These findings lay the groundwork for a robust tissue culture protocol for rice cv. RD43 as a means for advanced breeding studies and contributing to global food security amid climate change challenges. Full article

Three-dimensional models of trees can help simulate forest resource management, field surveys, and urban landscape design. With the advancement of Computer Vision (CV) and laser remote sensing technology, forestry researchers can use images and point cloud data to perform digital modeling. However, modeling leafless tree models that conform to tree growth rules and have effective branching remains a major challenge. This article proposes a method based on 3D Gaussian Splatting (3D GS) to address this issue. Firstly, we compared the reconstruction of the same tree and confirmed the advantages of the 3D GS method in tree 3D reconstruction. Secondly, seven landscape trees were reconstructed using the 3D GS-based method, to verify the effectiveness of the method. Finally, the 3D reconstructed point cloud was used to generate the QSM and extract tree feature parameters to verify the accuracy of the reconstructed model. Our results indicate that this method can effectively reconstruct the structure of real trees, and especially completely reconstruct 3rd-order branches. Meanwhile, the error of the Diameter at Breast Height (DBH) of the model is below 1.59 cm, with a relative error of 3.8–14.6%. This proves that 3D GS effectively solved the problems of inconsistency between tree models and real growth rules, as well as poor branch structure in tree reconstruction models, providing new insights and research directions for the 3D reconstruction and visualization of landscape trees in the leafless stage. Full article

Alfin-like (AL) is a small plant-specific gene family characterized by a PHD-finger-like structural domain at the C-terminus and a DUF3594 structural domain at the N-terminus, and these genes play prominent roles in plant development and abiotic stress response. In this study, we conducted genome-wide identification and analyzed the AL protein family in Gossypium hirsutum cv. NDM8 to assess their response to various abiotic stresses for the first time. A total of 26 AL genes were identified in NDM8 and classified into four groups based on a phylogenetic tree. Moreover, cis-acting element analysis revealed that multiple phytohormone response and abiotic stress response elements were highly prevalent in AL gene promoters. Further, we discovered that the GhAL19 gene could negatively regulate drought and salt stresses via physiological and biochemical changes, gene expression, and the VIGS assay. The study found there was a significant increase in POD and SOD activity, as well as a significant change in MDA in VIGS-NaCl and VIGS-PEG plants. Transcriptome analysis demonstrated that the expression levels of the ABA biosynthesis gene (GhNCED1), signaling genes (GhABI1, GhABI2, and GhABI5), responsive genes (GhCOR47, GhRD22, and GhERFs), and the stress-related marker gene GhLEA14 were regulated in VIGS lines under drought and NaCl treatment. In summary, GhAL19 as an AL TF may negatively regulate tolerance to drought and salt by regulating the antioxidant capacity and ABA-mediated pathway. Full article

One challenge in predicting soil parameters using in situ visible and near infrared spectroscopy is the distortion of the spectra due to soil moisture. External parameter orthogonalization (EPO) is a mathematical method to remove unwanted variability from spectra. We created two different EPO correction matrices based on the difference between spectra collected in situ and, respectively, spectra collected from the same soil samples after drying and sieving and after drying, sieving and finely grinding. Spectra from 134 soil samples recorded with two different spectrometers were split into calibration and validation sets and the two EPO corrections were applied. Clay, organic carbon and total nitrogen content were predicted by partial least squares regression for uncorrected and EPO-corrected spectra using models based on the same type of spectra (“within domain”) as well as using laboratory-based models to predict in situ collected spectra (“cross-domain”). Our results show that the within-domain prediction of clay is improved with EPO corrections only for the research grade spectrometer, with no improvement for the other parameters. For the cross-domain predictions, there was a positive effect from both EPO corrections on all parameters. Overall, we also found that in situ collected spectra provided an equally successful prediction as laboratory-based spectra. Full article

The use of green manure can substantially increase the microbial diversity and multifunctionality of soil. Green manuring practices are becoming popular for tobacco production in China. However, the influence of different green manures in tobacco fields has not yet been clarified. Here, smooth vetch (SV), hairy vetch (HV), broad bean (BB), common vetch (CV), rapeseed (RS), and radish (RD) were selected as green manures to investigate their impact on soil multifunctionality and evaluate their effects on enhancing soil quality for tobacco cultivation in southwest China. The biomass of tobacco was highest in the SV treatment. Soil pH declined, and soil organic matter (SOM), total nitrogen (TN), and dissolved organic carbon (DOC) content in CV and BB and activity of extracellular enzymes in SV and CV treatments were higher than those in other treatments. Fungal diversity declined in SV and CV but did not affect soil multifunctionality, indicating that bacterial communities contributed more to soil multifunctionality than fungal communities. The abundance of Firmicutes, Rhizobiales, and Micrococcales in SV and CV treatments increased and was negatively correlated with soil pH but positively correlated with soil multifunctionality, suggesting that the decrease in soil pH contributed to increases in the abundance of functional bacteria. In the bacteria–fungi co-occurrence network, the relative abundance of key ecological modules negatively correlated with soil multifunctionality and was low in SV, CV, BB, and RS treatments, and this was associated with reductions in soil pH and increases in the content of SOM and nitrate nitrogen (NO₃⁻-N). Overall, we found that SV and CV are more beneficial for soil multifunctionality, and this was driven by the decrease in soil pH and the increase in SOM, TN, NO₃⁻-N, and C- and N-cycling functional bacteria. Full article

Inappropriate waste disposal imposes significant health risks in densely populated urban environments and schools, necessitating sustainable waste management. Therefore, a study was carried out at Al-Jazaer School, Kuwait, to evaluate rotary drum composting (RDC) of organic school waste comprising used paper, dry leaves, and vegetable food wastes in a 1:4:20 ratio. Feedstock comprising 42% organic school wastes, 42% horse manure, and 16% sawdust produced mature compost with a C:N ratio of 20.55 on the 43rd day of composting. Distinct mesophilic, thermophilic, cooling, and curing phases were observed during composting. Mature compost recorded a moisture content of 54.3%, pH 8.56, EC of 2.71 mS/cm, total nitrogen of 0.77%, total organic carbon of 18.25%, carbon content of 15.86%, and sulfur content of 0.14%. Soilless growing media comprising peat moss, perlite, and rotary drum compost in three proportions (1:1:1, 1:1:2, and 1:1:3), and peat moss, perlite, and commercial organic compost in a 1:1:3 ratio were evaluated for greenhouse vegetable production. The performance of cucumbers (Cucumis sativus cv. Ramos) raised in the lowest proportion of in-house prepared rotary drum compost (1:1:1 ratio) was comparable with that raised in the highest proportion of commercial compost (1:1:3). The study revealed the potential of RDC for decentralized sustainable waste management at the small-community scale and the suitability of compost from school wastes for soilless culture. Full article

Coxsackievirus-A6 (CV-A6) is responsible for more severe dermatological manifestations compared to other enteroviruses such as CV-A10, CV-A16, and EV-A71, causing HFMD in children and adults. Between 2005 and 2007, the recombinant subclade D3/RF-A started to expand globally, and a CV-A6 pandemic started. The study aimed to conduct whole-genome sequencing (WGS) of an isolated CV-A6 strain from currently circulating HFMD cases from India in 2022. Gene-specific RT-PCR and sequencing were used to perform molecular characterization of the isolated virus. Confirmation of these isolates was also performed by transmission electron microscopy and WGS. Among eleven positive clinical enterovirus specimens, eight CV-A6 strains were successfully isolated in the RD cell line. Isolates confirmed the presence of the CV-A6 strain based on VP1 and VP2 gene-specific RT-PCR. Sequences of isolates were clustered and identified as the novel CV-A6 strain of the D3/Y sub-genotype in India. The studies revealed that the D3/Y sub-genotype is being introduced into Indian circulation. The predicted putative functional loops found in VP1 of CV-A6 showed that the nucleotide sequences of the amino acid were a remarkably conserved loop prediction compatible with neutralizing linear epitopes. Therefore, this strain represents a potential candidate for vaccine development and antiviral studies. Full article

Preterm birth, defined as any birth before 37 weeks of completed gestation, poses adverse health risks to both mothers and infants. Despite preterm birth being associated with several risk factors, its relationship to maternal metabolism remains unclear, especially in first-time mothers. Aims of the present study were to identify maternal metabolic disruptions associated with preterm birth and to evaluate their predictive potentials. Blood was collected, and the serum harvested from the mothers of 24 preterm and 42 term births at 28–32 weeks gestation (onset of the 3rd trimester). Serum samples were assayed by untargeted metabolomic analyses via liquid chromatography/mass spectrometry (QTOF-LC/MS). Metabolites were annotated by inputting the observed mass-to-charge ratio into the Human Metabolome Database (HMDB). Analysis of 181 identified metabolites by PLS-DA modeling using SIMCA (v17) showed reasonable separation between the two groups (CV-ANOVA, p = 0.02). Further statistical analysis revealed lower serum levels of various acyl carnitines and amino acid metabolites in preterm mothers. Butenylcarnitine (C4:1), a short-chain acylcarnitine, was found to be the most predictive of preterm birth (AUROC = 0.73, [CI] 0.60–0.86). These observations, in conjuncture with past literature, reveal disruptions in fatty acid oxidation and energy metabolism in preterm primigravida. While these findings require validation, they reflect altered metabolic pathways that may be predictive of preterm delivery in primigravida. Full article

Parboiling influences chemical compositions in rice grains. The objectives of this study were to evaluate the change in chemical content, total phenolic content and antioxidant capacity of landrace rice genotypes under parboiling conditions and to identify the genotypes suitable for production of parboiled rice. Landrace rice varieties used in this study consisted of Glam Feang, Glam Tonkeaw, Kawgum, Glam Luem Phua, Medmakham, Deang Sakonnakhon, Sang Yod, Kawniewd-eang, Mali Deang, KDML105 and RD6. Parboiling reduced fiber content, total phenolic content and 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical-scavenging activity in rice grains. Fiber contents were 1.46% in brown rice (unpolished rice) and 1.40% in parboiled rice (24 h of soaking and 48 h of incubation). Total phenolic contents were 205.67 mg/100 g seed in brown rice and 35.34 mg/100 g seed in parboiled rice. Antioxidant capacity (DPPH) reduced from 68.45% in brown rice to 26.23% in parboiled rice. Ash content and protein content were not significantly affected by the parboiling process. Medmakham cv. had the highest total phenolic content and antioxidant capacity in brown rice and parboiled rice. Gum Leamphea cv. and Medmakham cv. were the best genotypes for ash content, protein content, total phenolic content and antioxidant capacity (DPPH) in brown rice and parboiled rice. Glam Feang cv. had the highest protein contents in brown rice and parboiled rice although it had low total phenolic content and antioxidant capacity. Cluster analysis further showed variation among genotypes, revealing distinct groupings in brown rice and parboiled rice based on chemical properties, phenolic content and antioxidant capacity. This research significantly contributes to a better understanding on how parboiling affects rice compositions and nutritional values. It emphasizes the importance of nuanced comprehension of how different rice varieties respond to parboiling, aiding informed decisions in rice processing and selection to meet specific nutritional needs. Full article

Cellular vehicle-to-everything (C-V2X) facilitates direct communication between vehicles and other user equipment (UE) to improve the efficiency of the Internet of vehicles communication through sidelink. In addition, in the new radio vehicle-to-everything (NR-V2X) Mode 2, users can automatically select resources using the conventional sensing-based semi-persistent scheduling (SB-SPS) resource selection algorithm. This mechanism allows users to generate a list of available resources after a sensing window, after which the users can randomly select resources, and the resource can be used continuously over multiple periods before reselection. However, during the sensing window, neighbors may generate a similar list of available resources, and random selection may lead to resource conflicts. This phenomenon may lead to deteriorated communication performance and increased latency due to incorrect reception. Therefore, this paper proposes a reuse distance-aided resource selection (RD-RS) method which integrates resource reuse distance judgement with SB-SPS to mitigate resource conflicts and interference caused by random selection. Moreover, the reuse distance judgement is performed before the final resource selection, and whether the user will select the current resource depends on the reuse distance between that user and other occupiers. Furthermore, the performance of the proposed scheme is compared with other algorithms. Simulation results show that the proposed RD-RS not only achieves a higher packet reception ratio (PRR) but also effectively reduces the inter-packet gap (IPG). Moreover, in specific scenarios, the proposed method outperforms conventional schemes by 9% in terms of PRR and 70% in terms of Range. Full article

Coxsackievirus A10 (CV-A10) is a prevailing causative agent of hand–foot–mouth disease, necessitating the isolation and adaptation of appropriate strains in cells allowed for human vaccine development. In this study, amino acid sequences of CV-A10 strains with different cell tropism on RD and Vero cells were compared. Various amino acids on the structural and non-structural proteins related to cell tropism were identified. The reverse genetic systems of several CV-A10 strains with RD⁺/Vero⁻ and RD⁺/Vero⁺ cell tropism were developed, and a set of CV-A10 recombinants were produced. The binding, entry, uncoating, and proliferation steps in the life cycle of these viruses were evaluated. P1 replacement of CV-A10 strains with different cell tropism revealed the pivotal role of the structural proteins in cell tropism. Further, seven amino acid substitutions in VP2 and VP1 were introduced to further investigate their roles played in cell tropism. These mutations cooperated in the growth of CV-A10 in Vero cells. Particularly, the valine to isoleucine mutation at the position VP1-236 (V1236I) was found to significantly restrict viral uncoating in Vero cells. Co-immunoprecipitation assays showed that the release of viral RNA from the KREMEN1 receptor-binding virions was restricted in r0195-V1236I compared with the parental strain r0195 (a RD⁺/Vero⁺ strain). Overall, this study highlights the dominant effect of structural proteins in CV-A10 adaption in Vero cells and the importance of V1236 in viral uncoating, providing a foundation for the mechanism study of CV-A10 cell tropism, and facilitating the development of vaccine candidates. Full article

The modulation coding scheme (MCS) index is the essential configuration parameter in cellular vehicle-to-everything (C-V2X) communication. As referenced by the 3rd Generation Partnership Project (3GPP), the MCS index will dictate the transport block size (TBS) index, which will affect the size of transport blocks and the number of physical resource blocks. These numbers are crucial in the C-V2X resource management since it is also bound to the transmission power used in the system. To the authors’ knowledge, this particular area of research has not been previously investigated. Ultimately, this research establishes the fundamental principles for future studies seeking to use the MCS adaptability in many contexts. In this work, we proposed the application of the reinforcement learning (RL) algorithm, as we used the Q-learning approach to adaptively change the MCS index according to the current environmental states. The simulation results showed that our proposed RL approach outperformed the static MCS index and was able to attain stability in a short number of events. Full article