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21 pages, 4614 KB  
Article
Integrated Mechanisms of Flavor and Quality Development in Braised Pork: A Study on Volatile Profiles, Texture Dynamics, Nucleotide Catabolism, and Protein Oxidation
by Zhuowen Wang, Jinxuan Cao, Jinpeng Wang, Yuemei Zhang, Wendi Teng, Shuai Zhuang and Ying Wang
Foods 2026, 15(3), 503; https://doi.org/10.3390/foods15030503 (registering DOI) - 1 Feb 2026
Abstract
This study aimed to explore the evolution of quality and flavor characteristics of braised pork during the cooking process and clarify the underlying formation mechanisms. Texture analysis revealed that shear force and hardness initially increased during blanching but decreased substantially with an extended [...] Read more.
This study aimed to explore the evolution of quality and flavor characteristics of braised pork during the cooking process and clarify the underlying formation mechanisms. Texture analysis revealed that shear force and hardness initially increased during blanching but decreased substantially with an extended stewing time. Low-field NMR indicated a progressive shift in water distribution from immobilized to free states, correlating with cooking loss and tenderness development. GC-MS and E-nose analyses showed significant increases in volatile compound diversity and concentrations, with aldehydes and ketones identified as dominant contributors to the evolving aroma profile. Throughout the processing, an enhancement in protein oxidation and nucleotide degradation was observed. Notably, significant increases were detected in the umami amino acids aspartic acid and glutamic acid, as well as in the umami nucleotide inosine monophosphate (IMP). These changes collectively contributed to the development of the characteristic taste profile. These findings indicate that the superior eating quality evolution and flavor development of braised pork during cooking are governed by the coordinated changes in texture, water distribution, lipid oxidation, and taste-active compounds. The interplay between these factors occurs at different stages of processing, leading to the complex, non-linear enhancement of flavor and texture. Full article
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19 pages, 4412 KB  
Article
Endothelial Cell Activation by SARS-CoV-2 Spike Protein and Its RBD: Central Player of the Immunothrobotic Response in COVID-19
by Alan Cano-Mendez, Nallely Garcia-Larragoiti, Yesenia Ambriz-Murillo, Jennifer Velez-Chavez, Rogelio Vega-Agavo, Gerardo Vazquez-Marrufo, Ana Edith Higareda-Mendoza, Alejandra Ochoa-Zarzosa and Martha Eva Viveros-Sandoval
Curr. Issues Mol. Biol. 2026, 48(2), 161; https://doi.org/10.3390/cimb48020161 (registering DOI) - 1 Feb 2026
Abstract
COVID-19 has been associated with an active immunothrombotic process. The involvement of endothelial cells (ECs) in the feedback loop of the inflammatory and thrombotic process characteristic of COVID-19, as well as its differences with other infectious inflammatory conditions, remains an area requiring further [...] Read more.
COVID-19 has been associated with an active immunothrombotic process. The involvement of endothelial cells (ECs) in the feedback loop of the inflammatory and thrombotic process characteristic of COVID-19, as well as its differences with other infectious inflammatory conditions, remains an area requiring further elucidation. This study aimed to assess the immunothrombotic phenotype induced by the SARS-CoV-2 Spike (S) protein and its receptor-binding domain (RBD) in endothelial-derived cell lines. HUVEC and EA.hy926 cell lines were exposed to S protein and to its RBD. Inflammatory, thrombotic, and fibrinolytic mediators were quantified. Molecular docking assays were conducted to identify potential EC receptors for S protein. EC activation was dependent on both protein concentration and stimulation time. An increased release of immunothrombotic biomarkers were observed in endothelial-derived cells exposed to the S protein and to its RBD. The RBD induced a stronger endothelial response. Molecular docking demonstrated high affinity and a possible interaction between the S protein and endothelial receptors: CD-141, CD-147, IL-6R, TLR 2, 4, and 7. These findings confirm that the S protein and its RBD can induce an immunothrombotic phenotype in EC-derived cell lines, potentially exacerbating the disease pathology. We propose possible endothelial receptors mediating this response. Full article
(This article belongs to the Special Issue Protein Domains: Structure and Molecular Function)
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14 pages, 1973 KB  
Article
Novel Silicone–Polyol Antifoam Emulsions: Impact on Foam Control and Physiology of Diverse Microbial Cultures
by Mikhail Frolov, Trofim A. Lozhkarev, Elmira A. Vasilieva, Leysan A. Vasileva, Almaz A. Zagidullin, Lucia Ya. Zakharova, Galim A. Kungurov, Natalia V. Trachtmann and Shamil Z. Validov
Fermentation 2026, 12(2), 78; https://doi.org/10.3390/fermentation12020078 (registering DOI) - 1 Feb 2026
Abstract
The selection of an optimal antifoam is critical for efficient fermentation, as industrial agents often have detrimental side effects like growth inhibition, while some can enhance productivity. We studied the efficacy of novel silicone–polyol antifoam emulsions for use in fermentation as defoamers. Except [...] Read more.
The selection of an optimal antifoam is critical for efficient fermentation, as industrial agents often have detrimental side effects like growth inhibition, while some can enhance productivity. We studied the efficacy of novel silicone–polyol antifoam emulsions for use in fermentation as defoamers. Except for agent 3L10, all antifoams tested did not show inhibition on six bacterial and one fungal culture. Interestingly, agent 3L10 strongly inhibited Gram-positive bacteria (especially Corynebacterium glutamicum) but not Gram-negative strains. A comprehensive evaluation protocol—combining chemical design, cytotoxicity screening across diverse microorganisms, the determination of minimum effective concentrations (MECs), and validation in model bioreactor fermentations—was established. Through this process, 6T80 was identified as a promising antifoam agent for fermentation. It exhibited a low MEC, high emulsion stability, and no cytotoxicity and did not impair growth or recombinant protein production in Bacillus subtilis or Pseudomonas putida fermentations. This study concludes that agent 6T80 is suitable for further application in processes involving Gram-negative and certain Gram-positive hosts. The developed methodology enables the targeted selection of highly efficient and biocompatible antifoams for specific biotechnological processes. Full article
(This article belongs to the Section Fermentation Process Design)
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13 pages, 1079 KB  
Article
Blood Biochemical Parameters in Non-Native Armored Catfishes (Loricariidae) from Highland Rivers of Central Vietnam
by Tran Duc Dien, Ekaterina V. Ganzha and Efim D. Pavlov
Hydrobiology 2026, 5(1), 5; https://doi.org/10.3390/hydrobiology5010005 (registering DOI) - 1 Feb 2026
Abstract
In the past decade, non-native suckermouth armored catfish, Pterygoplichthys spp., have spread throughout the highland rivers of Lam Dong province, Vietnam. We examined spatial and temporal variation in endocrine and biochemical profiles across different river reaches, river systems, and between two sampling years [...] Read more.
In the past decade, non-native suckermouth armored catfish, Pterygoplichthys spp., have spread throughout the highland rivers of Lam Dong province, Vietnam. We examined spatial and temporal variation in endocrine and biochemical profiles across different river reaches, river systems, and between two sampling years (2020 and 2022). Seven blood parameters related to metabolism and energy balance were measured: total and free triiodothyronine, cholesterol, triglycerides, total protein, creatinine, and direct bilirubin. Concentrations of thyroid hormones and cholesterol did not differ significantly across sites or years. Multivariate analyses indicated that thyroid-related pathways were only weakly influenced by the environmental variation, suggesting preserved thyroid homeostasis. In contrast, triglycerides, total protein, creatinine, and direct bilirubin varied among rivers and between years at the same site, likely reflecting differences in food availability and energy balance. These results suggest that biochemical variation in non-native armored catfish is primarily expressed through lipid metabolism and protein turnover, while thyroid function remains comparatively conserved across invaded river habitats. Full article
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16 pages, 292 KB  
Review
Exosome-Based Therapeutics in Dermatology and Beyond: A Narrative Review
by Grant M. Pham
Biomedicines 2026, 14(2), 338; https://doi.org/10.3390/biomedicines14020338 (registering DOI) - 1 Feb 2026
Abstract
Exosomes are small extracellular vesicles that package DNA fragments, several classes of RNA, lipids, and proteins, and are now regarded as active messengers between cells rather than as cellular debris. This narrative review synthesizes dermatologic and related regenerative applications reported between 2020 and [...] Read more.
Exosomes are small extracellular vesicles that package DNA fragments, several classes of RNA, lipids, and proteins, and are now regarded as active messengers between cells rather than as cellular debris. This narrative review synthesizes dermatologic and related regenerative applications reported between 2020 and 2025, drawing on PubMed and Scopus searches. In skin, exosomes regulate inflammation, angiogenesis, matrix remodeling, pigmentation, and hair cycling. Preclinical models show faster wound closure, improved scar architecture, attenuation of photoaging changes, and stimulation of hair growth, with additional signals in inflammatory dermatoses and fungal skin disease. Early human studies in wound care, rejuvenation, scars, and alopecia suggest acceptable safety and a recurring pattern of benefit when exosomes are used as adjuncts to microneedling, lasers, or standard dressings, although products, dosing, and outcome measures remain heterogeneous. Beyond dermatology, early work in osteoarticular and soft tissue repair points toward meaningful regenerative potential, but clinical programs are still at an early stage. In practice, exosomes are being positioned as acellular alternatives or add-ons to platelet-rich plasma, bone marrow aspirate concentrate, and conventional topicals and as emerging carriers for small molecules and biologics. Key limitations include low yields, product and cargo heterogeneity, lack of agreed quality and potency metrics, and uncertain regulatory status. Whether exosomes remain boutique adjuncts or become part of standard dermatologic and musculoskeletal practice will depend on what happens next: consistent manufacturing, agreed-upon characterization panels, meaningful potency assays, robust pharmacokinetic and biodistribution data, and comparative trials that track outcomes and safety over years rather than weeks. Full article
11 pages, 519 KB  
Article
Evaluation of the Immunocrit Technique as an On-Farm Method to Evaluate Immune Passive Transfer in Katahdin-Easycare Crossbreed Lambs
by Hunter G. Perez, Alyssa Lancaster, Andrew Byron, Tayla Lubinsky, Sunday O. Peters, Amy N. Abrams and Aridany Suarez-Trujillo
Ruminants 2026, 6(1), 10; https://doi.org/10.3390/ruminants6010010 (registering DOI) - 31 Jan 2026
Abstract
Small ruminants, such as newborn lambs, rely on timely colostrum intake to acquire passive immunity through the absorption of immunoglobulin (Ig). Evaluating Ig transfer is important for ensuring lamb health and survival. However, current methods such as enzyme-linked immunosorbent assay (ELISA) and radial [...] Read more.
Small ruminants, such as newborn lambs, rely on timely colostrum intake to acquire passive immunity through the absorption of immunoglobulin (Ig). Evaluating Ig transfer is important for ensuring lamb health and survival. However, current methods such as enzyme-linked immunosorbent assay (ELISA) and radial immunodiffusion (RID) are widely used but remain costly and require specialized facilities. The immunocrit assay has been proposed as a lower-cost alternative for evaluating serum Ig concentrations. This study aimed to evaluate the immunocrit method in lambs by comparing it with ELISA, RID, and total serum protein. Serum was collected from 135 Katahdin-Easycare lambs 24–36 h after birth. Samples were analyzed using sheep immunoglobulin G ELISA, Sheep immunoglobulin G RID, serum protein, and the immunocrit method. Pearson’s correlation was used to assess linear relationships between the methods, and Receiver Operating Characteristics (ROC) analysis was used to evaluate test accuracy, with RID as the gold standard (15 mg/mL cutoff). The immunocrit showed a high correlation with RID (r = 0.870), moderate correlation with serum protein (r = 0.725), and good correlation with ELISA (r = 0.607). The ROC analysis showed that the immunocrit had a sensitivity of 100% at a cutoff of 4.34%. These results indicate that the immunocrit method provides comparable accuracy to RID and serum protein, and could serve as a reliable, practical, and inexpensive tool for on-farm evaluation of passive transfer in Katahdin-Easycare crossbred lambs between 24 and 36 h after birth. Full article
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29 pages, 5846 KB  
Article
Chemical Profiling, Ampicillin Interaction Patterns, and Exploratory Molecular Docking of Lauraceae Essential Oils
by Anca Hulea, Florin Imbrea, Doris Floares (Oarga), Iuliana Popescu, Mukhtar Adeiza Suleiman, Calin Hulea, Ilinca Merima Imbrea, Alina-Georgeta Neacșu, Marinel Horablaga, Cosmin Alin Popescu and Diana Obistioiu
Int. J. Mol. Sci. 2026, 27(3), 1447; https://doi.org/10.3390/ijms27031447 (registering DOI) - 31 Jan 2026
Abstract
This study compares the chemical composition, antimicrobial effects, and antibiotic-potentiating capacity of three Lauraceae essential oils (EO): Cryptocarya agathophylla (CAEO), Litsea cubeba (LCEO), and Laurus nobilis (LNEO). Gas chromatography–mass spectrometry (GC–MS) analysis revealed distinct chemotypes: CAEO and LCEO were dominated by oxygenated monoterpenes, [...] Read more.
This study compares the chemical composition, antimicrobial effects, and antibiotic-potentiating capacity of three Lauraceae essential oils (EO): Cryptocarya agathophylla (CAEO), Litsea cubeba (LCEO), and Laurus nobilis (LNEO). Gas chromatography–mass spectrometry (GC–MS) analysis revealed distinct chemotypes: CAEO and LCEO were dominated by oxygenated monoterpenes, while LNEO contained the highest levels of monoterpene hydrocarbons. Antibacterial testing against nine bacterial strains showed strain-dependent growth suppression trends, while true minimum inhibitory concentrations (MICs) were reached only in selected cases. EO–ampicillin interactions were evaluated using MIC-based checkerboard criteria, whereas OD-derived inhibition parameters were used exclusively to describe sub-MIC potentiation trends. In combination assays, LNEO exhibited the most pronounced potentiating effects against Streptococcus pyogenes, Shigella flexneri, and Haemophilus influenzae, while CAEO and LCEO showed moderate or strain-dependent enhancement. Hierarchical clustering highlighted distinct oil- and strain-specific interaction profiles. Overall, although CAEO displayed stronger intrinsic antibacterial effects when tested alone, LNEO emerged as the most effective potentiator of ampicillin activity in a strain-dependent manner. The effects of the major compounds identified in the Lauraceae EO were assessed in silico against protein targets of some microorganisms using the AutoDock software. The docking scores revealed binding affinities of the bioactive compounds towards Dpr protein (4.3–5.8 kcal/mol), DNA gyrase (4.7–7.1 kcal/mol), mono- diacylglycerol lipase (4.4–6.2 kcal/mol), CYP51 (5.8–8.0 kcal/mol), phage-encoded quorum sensing anti-activator (5.8–8.0 kcal/mol) and Chondroitin ABC lyase I (4.8–6.3 kcal/mol). Two (2) hit compounds (α-Citral, β-Citral) were finely defined by strong hydrophobic and hydrophilic interactions with the bacterial and fungal protein targets, respectively. Full article
(This article belongs to the Special Issue Rational Design and Synthesis of Bioactive Molecules, 2nd Edition)
16 pages, 2920 KB  
Article
Suaeda salsa SsDHN Gene Enhances Drought Tolerance in Tobacco (Nicotiana tabacum)
by Hui Ma, Zhixin Song, Jiahui Wu, Yuou Song, Jingyi Zhang, Ming Zhong, Jingwei Lin, Shuisen Chen and Hui Li
Plants 2026, 15(3), 443; https://doi.org/10.3390/plants15030443 (registering DOI) - 31 Jan 2026
Abstract
Drought stress critically constrains plant development and morphogenesis, representing a substantial challenge to crop production systems. Dehydrins (DHNs), belonging to the late embryogenesis abundant (LEA) protein superfamily, play crucial roles in plant adaptation to environmental stress conditions. Nevertheless, the capacity of Suaeda salsa [...] Read more.
Drought stress critically constrains plant development and morphogenesis, representing a substantial challenge to crop production systems. Dehydrins (DHNs), belonging to the late embryogenesis abundant (LEA) protein superfamily, play crucial roles in plant adaptation to environmental stress conditions. Nevertheless, the capacity of Suaeda salsa SsDHN protein to confer drought resistance has not been adequately investigated. In the present study, transgenic tobacco lines with constitutive SsDHN expression (SsDHN-OE) were employed to examine its influence on seedling development under water-limited conditions. Results indicated that constitutive SsDHN expression enhanced biomass accumulation, foliar expansion, root elongation, and root surface dimensions in water-stressed seedlings. Moreover, transformed lines demonstrated elevated proline (Pro) accumulation and abscisic acid (ABA) content, augmented antioxidant enzyme activity, and intensified stomatal regulation under stress conditions. Conversely, photoinhibition intensity, chloroplast structural degradation, malondialdehyde (MDA) accumulation, electrolyte leakage, hydrogen peroxide (H2O2), and superoxide radical (O2) concentrations were diminished. Furthermore, transcript abundance of stress-responsive genes—encompassing NtNCED3, NtSnRK2.2, NtRD26, NtLEA5, NtPOD, NtSOD, NtCAT, and NtAPX1—was markedly increased in SsDHN-OE lines experiencing drought stress. Taken together, these findings establish that SsDHN functions as a positive regulator of drought resilience in plants. Full article
(This article belongs to the Special Issue Abiotic Stress Responses in Plants—Second Edition)
21 pages, 1129 KB  
Review
Indoxyl Sulfate in the Gut–Kidney Axis: Pathophysiology and Clinical Significance in CKD-Associated Colorectal Cancer
by Hidehisa Shimizu and Toshimitsu Niwa
Toxins 2026, 18(2), 72; https://doi.org/10.3390/toxins18020072 - 30 Jan 2026
Abstract
Chronic Kidney Disease (CKD) and Colorectal Cancer (CRC) share a profound epidemiological link, supported by Mendelian randomization studies suggesting causality. This review articulates a refined Gut–Kidney Axis, focusing on the pathophysiology of indole-derived uremic toxins. CKD-induced dysbiosis drives hepatic synthesis and systemic accumulation [...] Read more.
Chronic Kidney Disease (CKD) and Colorectal Cancer (CRC) share a profound epidemiological link, supported by Mendelian randomization studies suggesting causality. This review articulates a refined Gut–Kidney Axis, focusing on the pathophysiology of indole-derived uremic toxins. CKD-induced dysbiosis drives hepatic synthesis and systemic accumulation of indoxyl sulfate, which is proposed to promote carcinogenesis via Aryl Hydrocarbon Receptor (AhR) and Akt signaling, ultimately upregulating c-Myc and EGFR. We propose a two-compartment model: while systemic indoxyl sulfate reflects the total gut indole pool (mainly from planktonic bacteria), adherent bacteria like Fusobacterium nucleatum may create high-concentration indole hotspots within the tumor microenvironment. Clinically, we advocate for protein-independent DNA methylation biomarkers (SEPT9, SDC2) to avoid renal confounding. Furthermore, we propose a novel diagnostic panel integrating serum indoxyl sulfate (systemic load) and urinary indoxyl sulfate (gut production) to guide therapy. Therapeutically, targeting upstream drivers (AhR/Akt) may bypass resistance to anti-EGFR therapies in KRAS-mutated tumors. We also discuss the repurposing of the oral adsorbent AST-120 and emerging bacteriophage therapies as strategies to disrupt this oncogenic axis. This review offers a comprehensive framework for stratified management of CKD-associated CRC. Full article
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20 pages, 781 KB  
Review
Antidiabetic Effects of Anthocyanins on Pancreatic β-Cell Function: A Systematic Review of In Vitro Studies
by Ravish Kumkum, Theresha Ruwan Pathiranage, Bryony A. McNeill, Leni R. Rivera and Kathryn Aston-Mourney
Int. J. Mol. Sci. 2026, 27(3), 1415; https://doi.org/10.3390/ijms27031415 - 30 Jan 2026
Abstract
Pancreatic β-cell dysfunction is the key driver of type 2 diabetes, and anthocyanins have been proposed as dietary compounds that may help preserve β-cell health. This systematic review aimed to synthesise evidence on the direct effects of anthocyanins on β-cell viability, apoptosis, oxidative [...] Read more.
Pancreatic β-cell dysfunction is the key driver of type 2 diabetes, and anthocyanins have been proposed as dietary compounds that may help preserve β-cell health. This systematic review aimed to synthesise evidence on the direct effects of anthocyanins on β-cell viability, apoptosis, oxidative stress, and insulin secretion across in vitro models. Four databases were searched in March–April 2025, and eighteen studies met the inclusion criteria. Purified anthocyanins—including cyanidin-3-glucoside (C3G), cyanidin-3-rutinoside (C3R), malvidin-3-glucoside (M3G), and delphinidin-3-glucoside (D3G)—as well as anthocyanin-rich berry extracts, were tested in INS-1, MIN6, RIN-m5F cells and primary mouse or human islets under glucotoxic, lipotoxic, oxidative, cytokine, and amyloidogenic stress. Anthocyanins consistently improved β-cell viability, reduced apoptosis, and lowered reactive oxygen species (ROS), nitric oxide (NO), and thiobarbituric acid reactive substances (TBARSs) levels while enhancing antioxidant enzyme activities. Multiple studies showed upregulation of insulin secretion-related genes and proteins, and both acute and chronic treatments increased glucose-stimulated insulin secretion under normal and stressed conditions. Mechanistic pathways involved modulation of mitogen-activated protein kinase (MAPK) signalling, endoplasmic reticulum (ER) stress responses, inflammatory mediators, and mitophagy (PINK1/PARKIN). While effective in vitro concentrations were higher than typical circulating levels, the collective evidence highlights anthocyanins as promising β-cell protective agents and underscores the need for studies examining their metabolites and physiologically relevant exposure. Full article
(This article belongs to the Special Issue The Effect of Food-Derived Compounds on Brown Fat Cell Function)
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20 pages, 1282 KB  
Article
Acclimation of Young Plants of Opuntia spp. to the Heightened Night Temperature
by Claudia Reyes Buendía, Cecilia Beatriz Peña-Valdivia, Daniel Padilla-Chacón, Amalio Santacruz Varela and Monserrat Vázquez Sánchez
Horticulturae 2026, 12(2), 167; https://doi.org/10.3390/horticulturae12020167 - 30 Jan 2026
Abstract
Increases in global temperatures, due to the climate change, are generating stress in most plant species. We hypothesize that young plants of Opuntia spp. adjust their Crassulacean acid metabolism (CAM) to the increase in nighttime temperature, allowing them to continue growing. The study [...] Read more.
Increases in global temperatures, due to the climate change, are generating stress in most plant species. We hypothesize that young plants of Opuntia spp. adjust their Crassulacean acid metabolism (CAM) to the increase in nighttime temperature, allowing them to continue growing. The study was carried out in a greenhouse and laboratory of the Colegio de Postgraduados, Montecillo, Mexico. Three-month-old greenhouse-grown plants remained in a control environment with an average day/night temperature of 19.1/12.3 °C or were maintained in a chamber with increased nighttime temperatures averaging 19.1/18.9 °C day/night for 70 days. The experimental design was completely randomized with two treatments (control and high nighttime temperatures). After 70 days of high nighttime temperatures (HNT), at dawn (end of CAM phase I), plants had a 45% decrease in glucose (2.9 to 1.5 mg/100 mg dry tissue; dt) concentration and doubled and tripled fructose (0.43 to 0.95 mg/100 mg dt) and sucrose (0.47 to 0.09 mg/100 mg dt) concentrations. Glucose consumption may be related to the plant’s metabolic energy expenditure to overcome stress. The significant increase in fructose and sucrose is explainable by their function as signaling molecules among others. In contrast, photosynthetic efficiency, i.e., increased compared to the control, but the difference of acidity (end of phase I less phase III), the concentration of starch (1 mg/100 mg dt), free amino acids and soluble protein (1.2 mg/100 mg dt), wet and dry matter, stem height (60 cm) and width of the stem at dawn were not significantly affected. The adjustments in C and N metabolism and the non-significant effect on growth promoted by 70 HNT days may be related to adjustments in enzyme activities without changes in protein concentration. Young Opuntia spp. plants adjust their metabolism in response to increased nighttime temperatures, allowing them to maintain growth similar to that of the control. The results confirm the great potential of using the Opuntia genus in agriculture and genetic improvement in the face of the challenges posed by climatic change. Full article
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18 pages, 2703 KB  
Article
Conserved Phosphoprotein Networks Identify Actionable Adhesion/Wnt and Metallothionein Modules in Cholangiocarcinoma
by Sirinya Sitthirak, Sittiruk Roytrakul, Arporn Wangwiwatsin, Nisana Namwat, Poramate Klanrit, Hasaya Dokduang, Prakasit Sa-ngiamwibool, Attapol Titapun, Apiwat Jareanrat, Vasin Thanasukarn, Natcha Khuntikeo, Teh Bin Tean, Luke Boulter, Yoshinori Murakami and Watcharin Loilome
Med. Sci. 2026, 14(1), 63; https://doi.org/10.3390/medsci14010063 - 30 Jan 2026
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Abstract
Background/Objectives: Cholangiocarcinoma (CCA) is a very aggressive biliary carcinoma characterised by significant molecular heterogeneity and restricted treatment alternatives. Despite genomic and proteomic investigations revealing recurrent changes, the signalling dynamics influencing tumour behaviour remain inadequately comprehended. Methods: We conducted high-resolution Liquid Chromatography–Tandem Mass Spectrometry [...] Read more.
Background/Objectives: Cholangiocarcinoma (CCA) is a very aggressive biliary carcinoma characterised by significant molecular heterogeneity and restricted treatment alternatives. Despite genomic and proteomic investigations revealing recurrent changes, the signalling dynamics influencing tumour behaviour remain inadequately comprehended. Methods: We conducted high-resolution Liquid Chromatography–Tandem Mass Spectrometry (LC–MS/MS)-based phosphoproteomics on paired tumour and surrounding tissues from 13 CCA patients in Northeast Thailand, meticulously sampling four geographically unique tumour areas for each patient. Our analysis concentrated on phosphoproteins consistently identified across all regions, delineating strong tumour-specific and cohort-wide phosphorylation signatures. Results: Notwithstanding considerable inter-patient variability, two conserved signalling modules were identified: an adhesion/Wnt axis regulated by hyperphosphorylated CTNNB1 protein (β-catenin) and a metal-handling module facilitated by metallothionein-1G (MT1G) protein and metallothionein-2A (MT2A) protein. Pathway enrichment identified focal adhesion, ECM-receptor interaction, cytoskeletal modulation, and mineral absorption as critical activities. Conclusions: This study elucidates conserved oncogenic pathways by analysing phosphoproteomic signatures across regional and patient-level variability, emphasising phosphoproteomics as a robust framework for biomarker and therapeutic development in CCA. Full article
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23 pages, 5148 KB  
Article
Antifibrotic Effects of Thymus syriacus Essential Oil in Bleomycin-Induced Pulmonary Fibrosis via Suppression of the TGF-β1/Smad2 Axis
by Pınar Aksoy, Önder Yumrutaş, Muhittin Doğan, Pınar Yumrutaş, Mehmet Sökücü and Mustafa Pehlivan
Int. J. Mol. Sci. 2026, 27(3), 1401; https://doi.org/10.3390/ijms27031401 - 30 Jan 2026
Viewed by 18
Abstract
Background: Pulmonary fibrosis (PF) is an irreversible interstitial lung disease in which the TGF-β/SMAD signaling pathway plays a critical role in its pathogenesis. Due to the anti-inflammatory and antioxidant properties of Thymus species, it is hypothesized that they may suppress pulmonary fibrosis by [...] Read more.
Background: Pulmonary fibrosis (PF) is an irreversible interstitial lung disease in which the TGF-β/SMAD signaling pathway plays a critical role in its pathogenesis. Due to the anti-inflammatory and antioxidant properties of Thymus species, it is hypothesized that they may suppress pulmonary fibrosis by modulating the TGF-β/SMAD pathway. This study aimed to investigate the potential antifibrotic effects of Thymus syriacus essential oil (TS) on the TGF-β/SMAD pathway in bleomycin-induced PF. Methods: PF was induced with bleomycin, and TS was administered at concentrations of 50 and 100 mg/mL for 28 days. mRNA and protein levels of TGF-β1, SMAD2, COL1, and α-SMA in lung tissues isolated were analyzed using real-time PCR and ELISA. TNF-α levels in BALF were measured by ELISA. ROS and MDA levels in lung issues were determined using 2,7-DHCFDA and TBARS tests, respectively. Histopathological evaluation was performed using Hematoxylin–Eosin and Masson’s trichrome staining. Blood samples were analyzed for kidney, liver, and cardiac toxicity markers. The chemical composition of TS was determined by GC–MS. Results: TS significantly reduced levels of TGF-β1, SMAD2, COL1, α-SMA, TNF-α, ROS and MDA compared to the BLM group. PF alterations were markedly attenuated by TS treatment. Thymol, p-cymene and carvacrol were identified as major constituents of TS. Conclusion: Overall, TS alleviates pulmonary fibrosis by suppressing the TGF-β/SMAD2 signaling pathway. Full article
(This article belongs to the Section Molecular Biology)
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18 pages, 456 KB  
Article
A Combination of LED and Compost to Improve Spinacia oleracea L. Quality and Chemical Composition
by Alicia Hernández-Lara, Daiana Almeida, Tayse F. F. da Silveira, Cinthia Nájera, Carla Pereira, Ângela Fernandes, Margarita Ros, José Antonio Pascual and Lillian Barros
Horticulturae 2026, 12(2), 165; https://doi.org/10.3390/horticulturae12020165 - 30 Jan 2026
Viewed by 29
Abstract
Background: Spinach has a high content of nutrients, proteins, carbohydrates, and vitamins beneficial for human health, that are closely associated with the type of crop, the growing media, the temperature, and lights used for growing. Methods: Two types of light were [...] Read more.
Background: Spinach has a high content of nutrients, proteins, carbohydrates, and vitamins beneficial for human health, that are closely associated with the type of crop, the growing media, the temperature, and lights used for growing. Methods: Two types of light were used: white light (WL) and red light (RL), and also three different growing media: compost without additives (CB), compost with coffee additive (CC), and compost with rockrose additive (CR). Results: Spinach grown under WL, regardless of the treatment, showed greater plant growth than that grown under RL_P. Furthermore, treatments WL_CC and WL_CR increased by 90% and 95%, respectively, compared to WL_P; similarly, treatments WL_CB, WL_CC, and WL_CR increased by 179%, 174%, and 205%, respectively, compared to the RL_P control. The protein content of spinach leaves from growing media WL_CB and WL_CC increased by 50 and 46% respectively compared to WL_P; similarly, growing media RL_CB and RL_CC increased by 82 and 57% respectively compared to RL_P. This contrasted with the carbohydrate content, which was higher in spinach grown under WL_P and RL_P. Spinach grown under WL_P and RL_P showed significantly more free sugars. On the other hand, spinach grown under WL had a higher concentration of organic acids than that grown under RL, regardless of the growing media used. The content of fatty acids, phenolic compounds, and antioxidant activities did not follow a clear pattern with respect to the type of light and growing media. Conclusions: Overall, compost-based substrates combined with white LED light enhanced spinach growth and nutritional quality through a synergistic effect. However, compost reduced phenolic compounds, while red LED light increased phenolic content and antioxidant activity, indicating contrasting effects on spinach quality. Full article
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Article
Polyphenols in Sugar Beet Leaves: Composition, Variability, and Valorization Opportunities
by Aneta Antczak-Chrobot, Jakub Macierzyński and Maciej Wojtczak
Molecules 2026, 31(3), 489; https://doi.org/10.3390/molecules31030489 - 30 Jan 2026
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Abstract
Sugar beet (root) is primarily used by industry as a raw material for sugar production, and its large-scale cultivation is closely linked to the sugar industry. Currently, sugar beet leaf (SBL) is not processed and is typically left on the field as green [...] Read more.
Sugar beet (root) is primarily used by industry as a raw material for sugar production, and its large-scale cultivation is closely linked to the sugar industry. Currently, sugar beet leaf (SBL) is not processed and is typically left on the field as green fertilizer after mechanical harvesting. This represents an underutilized biomass stream with potential bioactive compounds. The aim of this study was to evaluate the distribution of polyphenol and proteins in the leaf blade and petioles of different sugar beet cultivars harvested at various time points. Total polyphenols were quantified using vitexin as a reference standard, and the phenolic profile of methanolic extracts was characterized using complementary HPLC-DAD and LC-MS methods. The protein content in leaf blades ranged from 19% to 29% (dry weight) and was significantly influenced by cultivar and harvest date. Petioles contained significantly lower protein content, ranging from 4.9% to 9.5% (dry weight). The total polyphenol content (TPC) varied with cultivar and harvest time, ranging from 7.8 to 11.0 mg/g DW in leaf blades and from 0.8 to 2.7 mg/g DW in petioles. Leaf blades also contained substantially higher concentrations of vitexin derivatives (mean 7.4 ± 2.3 mg/g DW) than petioles (1.1 ± 0.6 mg/g DW). The percentage contribution of vitexin derivatives to TPC was high in both tissues (>70%) and decreased with later harvest dates. The results provide a detailed characterization of polyphenolic and protein distribution in blades and petioles of sugar beet leaves and can support further evaluation of their potential use in value-added applications. Full article
(This article belongs to the Section Food Chemistry)
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