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Search Results (376)

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Keywords = positional isomers

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15 pages, 3661 KB  
Article
Signals of Diagnostic Product Ions of Kavalactones in Their ESI Mass Spectra—Implications for Isomer Differentiation and Identification of Kavalactone Conjugates
by Małgorzata Kasperkowiak, Wojciech Jankowski, Marcin Hoffmann, Błażej Gierczyk and Rafał Frański
Int. J. Mol. Sci. 2026, 27(6), 2840; https://doi.org/10.3390/ijms27062840 - 20 Mar 2026
Viewed by 324
Abstract
Kavalactones are psychoactive substances that naturally occur in some plants, such as Piper methysticum, Alpinia zerumbet, and Achyrocline satureioides, which are considered to have a significantly positive effect on human organisms. For example, Alpinia zerumbet is classified as a life-expanding [...] Read more.
Kavalactones are psychoactive substances that naturally occur in some plants, such as Piper methysticum, Alpinia zerumbet, and Achyrocline satureioides, which are considered to have a significantly positive effect on human organisms. For example, Alpinia zerumbet is classified as a life-expanding plant. Although high-pressure liquid chromatography–mass spectrometry has been used for kavalactone analysis in plant material, the fragmentation pathways of protonated kavalactone molecules are not fully known and require further detailed study. In this paper, the fragmentation pathways of [M+H]+ ions of twelve kavalactones, including three pairs of isomers, are discussed in detail. Special emphasis has been placed on diagnostic product ions, which are characteristic of kavalactone structures. It has been demonstrated that diagnostic ions and structure–fragmentation relationships enable the differentiation of isomeric kavalactones and may be useful for the identification of other kavalactone conjugates, such as kavalactone dimers or kavalactone glycosides. Full article
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38 pages, 1439 KB  
Article
Pregnanolone Glutamate: A Dual-Fate Delivery System for Neuroactive Steroids in Perinatal Focal Cerebral Ischemia
by Grygoriy Tsenov, Iqra Bano, Marta Velíková, Viera Kútna, Hana Chodounská, Eva Kudová, Josef Bulant and Martin Hill
Int. J. Mol. Sci. 2026, 27(5), 2506; https://doi.org/10.3390/ijms27052506 - 9 Mar 2026
Viewed by 499
Abstract
Pregnanolone glutamate (PG) is a synthetic neurosteroid analog showing promise for treating ischemic brain injury, yet its blood–brain barrier (BBB) transport and metabolic fate remain unclear. We investigated the pharmacokinetics of PG in postnatal day 12 rats of both sexes subjected to endothelin-1 [...] Read more.
Pregnanolone glutamate (PG) is a synthetic neurosteroid analog showing promise for treating ischemic brain injury, yet its blood–brain barrier (BBB) transport and metabolic fate remain unclear. We investigated the pharmacokinetics of PG in postnatal day 12 rats of both sexes subjected to endothelin-1 (ET-1)-induced focal hippocampal ischemia. Animals received PG (1 mg/kg intraperitoneal (i.p.)) or vehicle; serum and hippocampal steroidomes were profiled 60 min post-administration using gas chromatography-tandem mass spectrometry (GC-MS/MS) (hippocampus: n = 16 PG+, n = 27 PG−; multi-tissue subset: n = 6 PG+, n = 21 PG−). Our data revealed a “dual-fate” mechanism: PG undergoes systemic hydrolysis as a prodrug, as suggested by the tissue distribution pattern at 60 min post-administration, but also crosses the BBB intact, with significant parent conjugate accumulation in the hippocampus (42.3 pmol/g). The brain functioned as a “metabolic sink”, passively accumulating metabolites generated in peripheral organs—such as 17-hydroxypregnanolone—despite local absence of synthesizing enzymes (e.g., CYP17A1). Crucially, PG induced “metabolic segregation” within the central nervous system (CNS): the pharmacological 5β-pathway was saturated (~170-fold pregnanolone increase), while endogenous neuroprotective 5α-pathway (allopregnanolone) homeostasis remained preserved, contrasting with peripheral metabolic saturation. Preferential hippocampal accumulation of 3-oxo and 3β-isomers suggests autonomous regulatory buffering via oxidative 17β-hydroxysteroid dehydrogenase (HSD17B) enzymes, protecting against excessive GABAergic inhibition. This unique pharmacokinetic profile—combining metabolic segregation with active central buffering—defines PG as a dual-mechanism delivery system that generates central neuroactive metabolites—several with previously established GABAergic and neuroprotective activity—without disrupting endogenous neurosteroidogenesis, positioning it as a promising neurotherapeutic candidate minimizing physiological steroid homeostasis disruption. Importantly, the present study characterizes the pharmacokinetic and metabolic fate of PG; the neuroprotective efficacy of PG was demonstrated in our prior functional studies using the same model. Full article
(This article belongs to the Section Molecular Neurobiology)
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19 pages, 939 KB  
Review
Navigating Challenges in Mass Spectrometry Analysis of Endogenous and Synthetic Protein Modifications
by Caroline M. Hanson, Dina L. Bai and Jarrod A. Marto
Biomolecules 2026, 16(3), 367; https://doi.org/10.3390/biom16030367 - 28 Feb 2026
Viewed by 750
Abstract
Mass spectrometry-based analysis of post-translational modifications (PTMs) is a key strategy for characterizing protein regulation and identifying disease-associated targets, with endogenous PTMs serving as biomarkers for disease diagnosis and therapeutic response. More recently, chemical proteomic strategies have adapted PTM-focused workflows to measure engagement [...] Read more.
Mass spectrometry-based analysis of post-translational modifications (PTMs) is a key strategy for characterizing protein regulation and identifying disease-associated targets, with endogenous PTMs serving as biomarkers for disease diagnosis and therapeutic response. More recently, chemical proteomic strategies have adapted PTM-focused workflows to measure engagement of covalent and photoactivatable small-molecule probes, expanding the scope of ligand discovery for these disease-associated targets. This review provides an overview of mass spectrometry-based PTM analysis workflows, including LC–MS/MS acquisition and post-acquisition data processing, with an emphasis on how modification-specific physicochemical properties influence PTM detection and identification. Common analytical challenges that limit PTM identification, including variable MS/MS fragmentation behavior and modification site localization, are discussed using modifications such as phosphorylation and photoaffinity labeling probe adducts as representative examples. Recent advances in acquisition strategies and computational tools that improve spectral quality and confidence in PTM assignment are also summarized. Additionally, approaches for the analytical validation of modification events, such as metabolic labeling strategies, are described. Together, this review outlines key considerations, capabilities, and limitations of MS-based PTM profiling and provides a framework for interpreting PTM datasets to support their effective integration into downstream biochemical and disease target validation studies. Full article
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18 pages, 3541 KB  
Article
Structural Elucidation of Azo and Quinoneimine Products Formed in Diazonium-Based Color Reactions of Cannabinoids
by Hikari Nishiguchi, Kayo Nakamura, Ryosuke Arai, Riho Hamajima, Hiroko Abe, Akihiko Ishida, Manabu Tokeshi, Kyohei Higashi, Akiyoshi Saitoh and Hideyo Takahashi
Molecules 2026, 31(5), 796; https://doi.org/10.3390/molecules31050796 - 27 Feb 2026
Viewed by 314
Abstract
Cannabis use is generally restricted worldwide because it contains the narcotic compound Δ9-tetrahydrocannabinol (Δ9-THC). Although cannabis is detected at crime scenes using color-based primary screening methods, the details of the reaction mechanism have not yet been elucidated. In this [...] Read more.
Cannabis use is generally restricted worldwide because it contains the narcotic compound Δ9-tetrahydrocannabinol (Δ9-THC). Although cannabis is detected at crime scenes using color-based primary screening methods, the details of the reaction mechanism have not yet been elucidated. In this study, we isolated the products generated during the color reaction between the diazonium salt prepared from para-nitroaniline and nine cannabinoids and determined their structures. Azo compounds 6, 11, 16, and 17 were produced from cannabidiol, cannabigerol, cannabichromene, and cannabidiolic acid, respectively, while quinoneimines 710 and 1215, which contained positional isomers, were produced from cannabinol, Δ9-THC, and hexahydrocannabinol. The reaction barely proceeded with Δ9-THC acetate and HHC acetate. Full article
(This article belongs to the Section Organic Chemistry)
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23 pages, 7631 KB  
Article
Structure–Reactivity Relationships in N-Methylpyridinium Aldoxime Isomers: Comparative Experimental and Computational Studies
by Danijela Musija, Igor Picek, Robert Vianello, Dubravka Matković-Čalogović, Blaženka Foretić and Vladimir Damjanović
Int. J. Mol. Sci. 2026, 27(4), 2015; https://doi.org/10.3390/ijms27042015 - 20 Feb 2026
Viewed by 491
Abstract
The relative position of the oxime group within pharmaceutically relevant pyridinium oximes is a pivotal factor that governs their intrinsic physicochemical properties and their biological reactivity. However, studies providing in-depth, molecular-level insight into these structure–reactivity relationships are still limited. In this work, we [...] Read more.
The relative position of the oxime group within pharmaceutically relevant pyridinium oximes is a pivotal factor that governs their intrinsic physicochemical properties and their biological reactivity. However, studies providing in-depth, molecular-level insight into these structure–reactivity relationships are still limited. In this work, we present an integrated experimental and computational study of N-methylpyridinium-2-aldoxime chloride (PAM2-Cl), N-methylpyridinium-3-aldoxime iodide (PAM3-I), and N-methylpyridinium-4-aldoxime iodide (PAM4-I), aimed at elucidating discrete differences in their ionization behavior, electronic structure, σ-donor properties, and nucleophilicity. The crystal structure of PAM3-I was determined by X-ray diffraction. Comparative structural and spectroscopic (UV–Vis, NMR, IR) analyses elucidated the structural and electronic effects arising from the position of the oxime group. Kinetic studies of substitution reactions with aquapentacyanoferrate(II) in aqueous solution enabled the determination of pentacyano(PAM)ferrate(II) formation and dissociation rate constants, coordination modes, pKa values of the coordinated ligands, complex stability constants, and σ-donating capabilities. The DFT-based analysis of atomic charge distribution transcended experimental limitations, offering a new perspective on electronic structure-related properties. This study presents the first side-by-side, internally consistent structure–reactivity map across PAM2, PAM3, and PAM4 isomers that triangulates crystallography, UV–Vis-derived pKa values, substitution kinetics, and DFT descriptors in a single framework. Full article
(This article belongs to the Special Issue Thermodynamic and Spectral Studies of Complexes)
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20 pages, 5741 KB  
Article
Brevetoxin Metabolites: Emerging Toxins in French Shellfish Determined by LC-MS/MS and ELISA
by Zouher Amzil, Amélie Derrien, Korian Lhaute, Aouregan Terre Terrillon and Simon Tanniou
Mar. Drugs 2026, 24(2), 67; https://doi.org/10.3390/md24020067 - 3 Feb 2026
Viewed by 804
Abstract
In France, as part of the monitoring program for the emergence of marine toxins in shellfish (EMERGTOX), brevetoxins (BTX-2, BTX-3) were first detected in shellfish from Corsica (Mediterranean Sea) in 2018. The complex metabolic transformation of brevetoxins in shellfish, coupled with the limited [...] Read more.
In France, as part of the monitoring program for the emergence of marine toxins in shellfish (EMERGTOX), brevetoxins (BTX-2, BTX-3) were first detected in shellfish from Corsica (Mediterranean Sea) in 2018. The complex metabolic transformation of brevetoxins in shellfish, coupled with the limited availability of analytical standards for most metabolites, complicates the accurate evaluation of contamination levels. To address this challenge, two complementary analytical approaches were implemented to quantify brevetoxin metabolites in shellfish samples collected from 2018 to 2023: (i) a targeted LC-MS/MS method specially developed for brevetoxins; and (ii) an ELISA capable of detecting metabolites for which no reference standards are available. Of the 11 brevetoxin metabolites targeted, 4 were quantified by LC-MS/MS: BTX-2, BTX-3, BTX-B5, and S-deoxy-BTX-B2 (including its isomers). The ELISA consistently detected brevetoxins in all Corsican samples previously confirmed positive by LC-MS/MS, with concentrations systematically exceeding those measured by LC-MS/MS. This overestimation may result from antibody cross-reactivity and from the presence of unidentified brevetoxin metabolites not detected by LC-MS/MS. Regardless of the analytical method used, the highest concentration detected exceeded the current French guideline value for brevetoxins in shellfish. To ensure consumer protection, a two-step monitoring strategy is proposed: initial screening via ELISA to estimate brevetoxin contamination, followed by confirmatory LC-MS/MS analysis to identify and quantify the specific metabolites. Full article
(This article belongs to the Special Issue Marine Biotoxins, 4th Edition)
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19 pages, 4083 KB  
Article
Metabolism of the Isoflavone Derivative Structural Isomers ACF-02 and ACF-03 in Human Liver Microsomes
by Zhuoning Liang, Eui-Hyeon Kim, Ga-Young Kim, Jin-Hyuk Choi, Hyung-Ju Seo, Kwang-Hyeon Liu and Moonjae Cho
Pharmaceutics 2026, 18(1), 114; https://doi.org/10.3390/pharmaceutics18010114 - 15 Jan 2026
Viewed by 628
Abstract
Background/Objectives: Flavonoids are widely used as lead structures in drug discovery, and their pharmacological and metabolic properties are strongly influenced by structural features such as positional isomerism. This study aimed to compare the metabolic profiles and underlying mechanisms of two isoflavone-based positional isomers, [...] Read more.
Background/Objectives: Flavonoids are widely used as lead structures in drug discovery, and their pharmacological and metabolic properties are strongly influenced by structural features such as positional isomerism. This study aimed to compare the metabolic profiles and underlying mechanisms of two isoflavone-based positional isomers, ACF-02 (2-(4-hydroxy-3-methoxyphenyl)-6,7-dimethoxy-3-(4-methoxyphenyl)-4H-chromen-4-one) and ACF-03 (2-(3-hydroxy-4-methoxyphenyl)-6,7-dimethoxy-3-(4-methoxyphenyl)-4H-chromen-4-one). Methods: The metabolic pathways of synthetically prepared ACF-02 and ACF-03 were investigated using an in vitro incubation system with human liver microsomes (HLMs) supplemented with an NADPH-regenerating system, followed by liquid chromatography–high-resolution tandem mass spectrometry (LC–HRMS/MS) analysis. Metabolites were identified based on LC–HRMS/MS data and molecular networking-based node connectivity with the parent compounds. Major metabolites were further characterized by CYP phenotyping using recombinant CYP450 isoforms, and the potential for drug–drug interactions of ACF-03 was evaluated using a CYP probe substrate cocktail approach. Results: HLM incubation of ACF-02 and ACF-03 produced both hydroxylated and O-demethylated metabolites, with O-demethylation as the predominant pathway; notably, the most abundant O-demethylated metabolite differed in an isomer-dependent manner, occurring at the B2 ring for ACF-02 and at the A ring for ACF-03, with distinct CYP isoform involvement. Molecular networking supported the relationships between the parent compounds and their metabolites, and both compounds exhibited relatively high metabolic stability with limited CYP inhibition. Conclusions: Despite differing only in the position of a single methyl substituent, ACF-02 and ACF-03 exhibited distinct isomer-dependent metabolic profiles. These findings demonstrate that even subtle positional isomerism can significantly influence metabolic behavior and should be carefully considered during lead optimization and drug design. Full article
(This article belongs to the Section Pharmacokinetics and Pharmacodynamics)
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13 pages, 1876 KB  
Article
Discovery of Novel Minor Steviol Glycoside from the Stevia rebaudiana: Structural Characterization and Proposed Biosynthetic Pathway of Rebaudioside D17
by Xiao Juie Wong, Khairul Nizam Bin Nawi, Yeen Yee Wong, Ismail Ammar Bin Mohamat, Saravanan Ramandach, Mohamad Afzaal Bin Hasim and Avetik Markosyan
Biomolecules 2026, 16(1), 146; https://doi.org/10.3390/biom16010146 - 14 Jan 2026
Viewed by 598
Abstract
A novel steviol glycoside, Rebaudioside D17, was identified from the leaf extract of Stevia rebaudiana Bertoni. This compound features a rare β-1→4 glycosidic linkage between two glucose units at the C19 position, distinguishing it from its structural isomer, Rebaudioside D. The [...] Read more.
A novel steviol glycoside, Rebaudioside D17, was identified from the leaf extract of Stevia rebaudiana Bertoni. This compound features a rare β-1→4 glycosidic linkage between two glucose units at the C19 position, distinguishing it from its structural isomer, Rebaudioside D. The aim of this study was to isolate and characterize Rebaudioside D17 and investigate its biosynthetic origin. The compound was isolated and structurally characterized using comprehensive NMR spectroscopy including 1H, 13C, COSY, NOESY, Heteronuclear Single Quantum Coherence–Distortionless Enhancement by Polarization Transfer (HSQC-DEPT), Heteronuclear Multiple Bond Correlation (HMBC), Heteronuclear Single Quantum Coherence–Total Correlated Spectroscopy (HSQC-TOCSY), along with mass spectrometry analysis. A tentative biosynthetic pathway is proposed, involving Rebaudioside E19, a putative intermediate bearing the same β-1→4 glycosidic linkage at C19. Rebaudioside E19 may serve as a common precursor to both Rebaudioside D17 and Rebaudioside U3, a minor steviol glycoside previously reported in Stevia rebaudiana leaf extract, which also contains the same β-1→4 glycosidic linkage. The discovery of Rebaudioside D17 expands the known diversity of steviol glycosides and provides new insights into glycosylation patterns in Stevia rebaudiana, which may support the development and production of novel sweeteners with improved sensory and physicochemical properties. Full article
(This article belongs to the Section Natural and Bio-derived Molecules)
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17 pages, 2346 KB  
Article
A Fiber Optic Sensor Using a Molecularly Imprinted Chitosan Membrane Coating on a Fiber Surface as a Transducer for Discriminating 4-Nitrophenol from Its Positional Isomers
by Myra Arana and Shiquan Tao
Sensors 2026, 26(2), 398; https://doi.org/10.3390/s26020398 - 8 Jan 2026
Viewed by 428
Abstract
An optical fiber chemical sensor using a molecularly imprinted chitosan membrane coated on the surface of a bent optical fiber probe was developed for selectively analyzing 4-nitrophenol (4-NP) in water samples. When the sensor probe is exposed to a water sample, the chitosan [...] Read more.
An optical fiber chemical sensor using a molecularly imprinted chitosan membrane coated on the surface of a bent optical fiber probe was developed for selectively analyzing 4-nitrophenol (4-NP) in water samples. When the sensor probe is exposed to a water sample, the chitosan MIP membrane extracts/concentrates 4-NP from the water sample into the membrane. The 4-NP extracted into the membrane was detected by passing a light beam through the optical fiber and the interaction of the 4-NP in the membrane with an evanescent wave of light guided through the optical fiber was detected as a sensing signal. This sensor detects the intrinsic optical absorption signal of 4-NP itself as a sensing signal. No chemical reagent was needed in analyzing this compound in a sample. The sensor is reversible, can be used for continuous monitoring of 4-NP in a sample, and has a quick response with a response time of 5 min. The sensor has high sensitivity and selectivity because the MIP membrane selectively concentrates 4-NP by 1.4 × 104 times into the membrane from a sample solution, but blocks out interference species, including its isomers and derivatives, from entering the membrane. The sensor achieved a detection limit of 2.5 ng/mL (0.018 µM), which is lower than most reported analytical techniques for analyzing this compound in water samples. This sensor can discriminate 4-NP from its isomers and derivatives, such as 2-NP, 3-NP, 2-Cl-4-NP, and 2,4-di-NP, with a selectivity factor ranging from 104 to 1922. This is the first reported case of an MIP-based optical fiber chemical sensor with the capability of discriminating an organic compound from its closely related positional isomers, which demonstrates the high selectivity nature of the MIP-based optical fiber chemical sensor technique. The sensor has been used for analyzing 4-NP in a standard addition sample. The obtained recovery rate ranged from 93% to 101%, demonstrating the application potential of this sensor in water quality analysis. Full article
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15 pages, 3557 KB  
Article
Obtaining and Studying the Properties of Composite Materials from ortho-, meta-, para-Carboxyphenylmaleimide and ABS
by Eldar Garaev, Shahana Guliyeva, Aygun Alikhanova, Konul Huseynguliyeva and Bakhtiyar Mammadov
Molecules 2026, 31(1), 190; https://doi.org/10.3390/molecules31010190 - 5 Jan 2026
Viewed by 693
Abstract
This work presents the results of the synthesis and investigation of new antibacterial composite materials based on acrylonitrile–butadiene–styrene (ABS) copolymer and o-, m-, p-carboxyphenylmaleimides (CPhMI). The composites were obtained by thermal mixing with varying contents of different CPhMI isomers in [...] Read more.
This work presents the results of the synthesis and investigation of new antibacterial composite materials based on acrylonitrile–butadiene–styrene (ABS) copolymer and o-, m-, p-carboxyphenylmaleimides (CPhMI). The composites were obtained by thermal mixing with varying contents of different CPhMI isomers in the polymer matrix. The structural and thermal characteristics of the synthesized materials were investigated using IR and UV spectroscopy, as well as thermogravimetric (TGA) and differential thermal analysis (DTA). The results indicate that the o-isomer imparts the highest thermal stability, while the p-isomer shows slightly lower stability. In terms of processability, the m-isomer exhibits the highest melt flow, the p-isomer an intermediate level, and the o-isomer the lowest. The antibacterial activity of the composites was evaluated by the agar diffusion method against Gram-positive (Staphylococcus aureus) and Gram-negative (Escherichia coli) microorganisms. All synthesized samples exhibited strong antibacterial activity against S. aureus and E. coli at a concentration of 0.5 wt%, confirming their potential for application in medical devices, as well as in sanitary polymer coatings and packaging. Full article
(This article belongs to the Section Macromolecular Chemistry)
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26 pages, 6445 KB  
Article
Potentiodynamic Fabrication of Aromatic Diamine Linkers on Electrochemically Reduced Graphene Oxide Surface for Environmental Pollutant Nitrobenzene Monitoring
by Karmegam Muthukrishnan, Venkatachalam Vinothkumar, Mathur Gopalakrishnan Sethuraman and Tae Hyun Kim
Biosensors 2026, 16(1), 33; https://doi.org/10.3390/bios16010033 - 1 Jan 2026
Cited by 2 | Viewed by 1019
Abstract
The structure of self-assembled monolayers (SAMs) greatly influences electrochemical interface behavior. This study systematically examines how positional isomers of aromatic diamines (ADMs) assemble on a glassy carbon (GC) electrode and how such ordering affects the attachment and performance of electrochemically reduced graphene oxide [...] Read more.
The structure of self-assembled monolayers (SAMs) greatly influences electrochemical interface behavior. This study systematically examines how positional isomers of aromatic diamines (ADMs) assemble on a glassy carbon (GC) electrode and how such ordering affects the attachment and performance of electrochemically reduced graphene oxide (ERGO). SAMs of ortho-, meta-, and para-phenylenediamine (o-PDA, m-PDA, and p-PDA) were fabricated on GC and characterized using atomic force microscopy (AFM) and Raman spectroscopy. Among them, GC/p-PDA exhibited the most compact and homogeneous interfacial structure. ERGO was subsequently immobilized through the free amine functionalities of the SAM, as confirmed by attenuated total reflectance–Fourier transform infrared spectroscopy (ATR-FTIR), X-ray photoelectron spectroscopy (XPS), and cyclic voltammetry (CV). Strong covalent coupling and electrostatic interactions between the positively charged ERGO and terminal amines enabled stable attachment. Under optimized conditions, the modified GC/p-PDA/ERGO electrode demonstrated exceptional electrocatalytic activity toward nitrobenzene (NBz) reduction, achieving a high sensitivity of 1410 μA mM−1 cm−2 and a low detection limit of 0.040 μM. In addition, this sensor displayed outstanding anti-interference capability, stability, and recovery in a water sample. These results establish GC/p-PDA/ERGO sensor as a robust and efficient electrocatalytically active interface for nitroaromatic pollutants detection and sustainable environmental monitoring. Full article
(This article belongs to the Special Issue Biosensors for Environmental Monitoring and Food Safety)
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27 pages, 5433 KB  
Article
Comprehensive Structural, Electronic, and Biological Characterization of fac-[Re(CO)3(5,6-epoxy-5,6-dihydro-1,10-phenanthroline)Br]: X-Ray, Aromaticity, Electrochemistry, and HeLa Cell Viability
by Alexander Carreño, Vania Artigas, Evys Ancede-Gallardo, Rosaly Morales-Guevara, Roxana Arce, Luis Leyva-Parra, Angel A. Martí, Camila Videla, María Carolina Otero and Manuel Gacitúa
Inorganics 2026, 14(1), 3; https://doi.org/10.3390/inorganics14010003 - 22 Dec 2025
Cited by 1 | Viewed by 1117
Abstract
The rhenium(I) tricarbonyl complex fac-[Re(CO)3(5,6-epoxy-5,6-dihydro-1,10-phenanthroline)Br] (ReL) has previously demonstrated promising luminescent properties, enabling its direct application as a probe for walled cells such as Candida albicans and Salmonella enterica. In this new study, we present a significantly expanded and [...] Read more.
The rhenium(I) tricarbonyl complex fac-[Re(CO)3(5,6-epoxy-5,6-dihydro-1,10-phenanthroline)Br] (ReL) has previously demonstrated promising luminescent properties, enabling its direct application as a probe for walled cells such as Candida albicans and Salmonella enterica. In this new study, we present a significantly expanded and comprehensive characterization of ReL, incorporating a wide range of experimental and computational techniques not previously reported. These include variable-temperature 1H and 13C NMR spectroscopy, CH-COSY, single-crystal X-ray diffraction, Hirshfeld surface analysis, DFT calculations, Fukui functions, non-covalent interaction (NCI) indices, and electrochemical profiling. Structural analysis confirmed a pseudo-octahedral geometry with the bromide ligand positioned cis to the epoxy group. NMR data revealed the coexistence of cis and trans isomers in solution, with the trans form being slightly more stable. DFT calculations and aromaticity descriptors indicated minimal electronic differences between isomers, supporting their unified treatment in subsequent analyses. Electrochemical studies revealed two oxidation and two reduction events, consistent with ECE and EEC mechanisms, including a Re(I) → Re(0) transition at −1.50 V vs. SCE. Theoretical redox potentials showed strong agreement with experimental data. Biological assays revealed a dose-dependent cytotoxic effect on HeLa cells, contrasting with previously reported low toxicity in microbial systems. These findings, combined with ReL’s luminescent and antimicrobial properties, underscore its multifunctional nature and highlight its potential as a bioactive and imaging agent for advanced therapeutic and microbiological applications. Full article
(This article belongs to the Special Issue Biological Activity of Metal Complexes)
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10 pages, 2873 KB  
Article
Molecular Structure-Sensitive Detection in MALDI-MS Utilizing Ag, CdTe, and Water-Splitting Photocatalyst
by Jiawei Xu and Tatsuya Fujino
Analytica 2025, 6(4), 53; https://doi.org/10.3390/analytica6040053 - 1 Dec 2025
Viewed by 491
Abstract
We have developed mold matrices that can be employed to distinguish between enantiomers (D- and L-glucose) and structural isomers (n- and iso-stearic acid) in matrix-assisted laser desorption/ionization mass spectrometry. Utilizing a temperature-responsive polymer, a molecular structure recognition film was created around metal or [...] Read more.
We have developed mold matrices that can be employed to distinguish between enantiomers (D- and L-glucose) and structural isomers (n- and iso-stearic acid) in matrix-assisted laser desorption/ionization mass spectrometry. Utilizing a temperature-responsive polymer, a molecular structure recognition film was created around metal or semiconductor particles, such as silver (Ag) or cadmium telluride (CdTe), forming the core. Molecules that fit the template structure were selectively ionized. To elucidate the properties of the mold matrix, the relationship between molecular recognition rate and peak intensity of analyte ion was investigated by varying polymer film thickness around the core. The relationship between molecular recognition rate and hydrophobicity of the template molecule was also examined. It was found that increasing the amount of polymer forming the molecular recognition film improved the molecular recognition rate. However, the peak intensity of the analyte ion decreased. It was also found that using highly hydrophobic molecules as template molecules resulted in high molecular recognition rates. In addition, a water-splitting photocatalyst was synthesized and utilized to fabricate the mold matrix. It was applicable to both positive and negative ion generation while recognizing the molecular structure of the analyte. Full article
(This article belongs to the Section Sample Pretreatment and Extraction)
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26 pages, 3775 KB  
Article
Structural and Optical Properties of New 2-Phenylamino-5-nitro-4-methylopyridine and 2-Phenylamino-5-nitro-6-methylpyridine Isomers
by Patrycja Godlewska, Jerzy Hanuza, Jan Janczak, Radosław Lisiecki, Paulina Ropuszyńska-Robak, Lucyna Dymińska and Wojciech Sąsiadek
Int. J. Mol. Sci. 2025, 26(23), 11522; https://doi.org/10.3390/ijms262311522 - 27 Nov 2025
Viewed by 594
Abstract
Two new 2-N-phenylamino-5-nitropyridine—4-methyl (2PA5N4MP) and 2-N-phenylamino-5-nitropyridine-6-methyl (2PA5N6MP) isomers were synthesized and comprehensively characterized by single-crystal X-ray diffraction, IR/Raman spectroscopy, UV–Vis absorption, and photoluminescence measurements. DFT and TD-DFT calculations were also carried out to support the experimental results. The X-ray [...] Read more.
Two new 2-N-phenylamino-5-nitropyridine—4-methyl (2PA5N4MP) and 2-N-phenylamino-5-nitropyridine-6-methyl (2PA5N6MP) isomers were synthesized and comprehensively characterized by single-crystal X-ray diffraction, IR/Raman spectroscopy, UV–Vis absorption, and photoluminescence measurements. DFT and TD-DFT calculations were also carried out to support the experimental results. The X-ray analysis revealed significant structural differences: 2PA5N6MP adopted an almost planar conformation (pyridine–phenyl dihedral ~3°), whereas 2PA5N4MP was markedly twisted (~45°), leading to distinct hydrogen-bonding motifs (N–H⋯N dimers vs. N–H⋯O interactions). These geometric disparities influenced their electronic properties: 2PA5N6MP exhibited a narrower HOMO–LUMO gap (≈2.45 eV) than 2PA5N4MP (≈3.77 eV), which was consistent with a pronounced bathochromic shift in absorption. Both isomers showed broad UV–Vis absorption (200–520 nm), but the 6-methyl derivative featured an additional low-energy charge–transfer band around 460 nm (with a maximum at ~500 nm) compared to ~355 nm in the 4-methyl isomer. Likewise, their photoluminescence spectra differed as follows: 2PA5N4MP emitted in the violet–blue region (bands at ~415 and 450 nm), whereas 2PA5N6MP had an extra orange band peaking at ~560 nm (in addition to a ~450 nm band). The red-shifted 560 nm emission of 2PA5N6MP was attributed to intersystem crossing into triplet states, in line with TD-DFT predictions. Furthermore, both isomers readily formed complexes with Eu3+ ions, and the Eu3+ chelates exhibited the characteristic red f–f emissions (5D07F transitions ~590–700 nm), demonstrating efficient sensitization of Eu3+ luminescence. Overall, the position of the methyl substituent strongly modulates the compounds’ optical behavior, and these isomers show promise as tunable organic dyes and effective ligands for luminescent lanthanide complexes. Full article
(This article belongs to the Section Biochemistry)
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Article
Analysis of β-Methylphenethylamine (BMPEA) and Its Novel Metabolites in Rat Blood Using MMSPE and UPLC-qTOF-MS
by Ahmad Alamir, James Watterson and Ibraheem Attafi
Toxics 2025, 13(12), 1011; https://doi.org/10.3390/toxics13121011 - 22 Nov 2025
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Abstract
β-Methylphenethylamine (BMPEA), a positional isomer of amphetamine increasingly detected in dietary supplements and weight-loss products, poses significant analytical challenges in forensic and doping control due to its structural similarity to amphetamine. This study presents a validated analytical workflow combining mixed-mode solid-phase extraction (MMSPE) [...] Read more.
β-Methylphenethylamine (BMPEA), a positional isomer of amphetamine increasingly detected in dietary supplements and weight-loss products, poses significant analytical challenges in forensic and doping control due to its structural similarity to amphetamine. This study presents a validated analytical workflow combining mixed-mode solid-phase extraction (MMSPE) with ultra-performance liquid chromatography–quadrupole time-of-flight mass spectrometry (UPLC-qTOF-MS) for the selective quantification of BMPEA and identification of its metabolites in rat cardiac blood. Blood was taken at 20 and 90 min after injection from twelve adult male Sprague-Dawley rats that were randomly assigned to four groups (n = 3): an untreated control, a low-dose cohort (10 mg/kg, i.p.), and two high-dose cohorts (30 mg/kg, i.p.). The technique demonstrated strong differentiation between BMPEA and amphetamine isomers, excellent linearity over 20–1000 ng/mL (R2 > 0.99), and quantification limits appropriate for forensic applications. A short biological half-life and quick elimination kinetics are consistent with related phenethylamines, as evidenced by the peak BMPEA concentrations of 899 ng/mL at 20 min and 22 ng/mL at 90 min. Comprehensive low- and high-energy mass spectrometric analyses revealed a novel BMPEA metabolite, characterized as 1-amino-2-phenylpropan-2-ol, based on fragmentation patterns and retention time comparison with reference standards. This work delivers a rigorous, high-sensitivity analytical tool for BMPEA detection in biological matrices and enhances understanding of its metabolic fate, offering critical biomarkers for forensic toxicology and anti-doping investigations. Full article
(This article belongs to the Section Novel Methods in Toxicology Research)
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