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Keywords = pollen image dataset

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23 pages, 33339 KB  
Article
Identification of Botanical Origin from Pollen Grains in Honey Using Computer Vision-Based Techniques
by Thi-Nhung Le, Duc-Manh Nguyen, A-Cong Giang, Hong-Thai Pham, Thi-Lan Le and Hai Vu
AgriEngineering 2025, 7(9), 282; https://doi.org/10.3390/agriengineering7090282 - 1 Sep 2025
Viewed by 942
Abstract
Identifying the botanical origin of honey is essential for ensuring its quality, preventing adulteration, and protecting consumers. Traditional techniques, such as melissopalynology, physicochemical analysis, and PCR, are often labor-intensive, time-consuming, or limited to the detection of only known species, while advanced DNA sequencing [...] Read more.
Identifying the botanical origin of honey is essential for ensuring its quality, preventing adulteration, and protecting consumers. Traditional techniques, such as melissopalynology, physicochemical analysis, and PCR, are often labor-intensive, time-consuming, or limited to the detection of only known species, while advanced DNA sequencing remains prohibitively costly. In this study, we aim to develop a deep learning-based approach for identifying pollen grains extracted from honey and captured through microscopic imaging. To achieve this, we first constructed a dataset named VNUA-Pollen52, which consists of microscopic images of pollen grains collected from flowers of plant species cultivated in the surveyed area in Hanoi, Vietnam. Second, we evaluated the classification performance of advanced deep learning models, including MobileNet, YOLOv11, and Vision Transformer, on pollen grain images. To improve performances of these model, we proposed data augmentation and hybrid fusion strategies to improve the identification accuracy of pollen grains extracted from honey. Third, we developed an online platform to support experts in identifying these pollen grains and to gather expert consensus, ensuring accurate determination of the plant species and providing a basis for evaluating the proposed identification strategy. Experimental results on 93 images of pollen grains extracted from honey samples demonstrated the effectiveness of the proposed hybrid fusion strategy, achieving 70.21% accuracy at rank 1 and 92.47% at rank 5. This study demonstrates the capability of recent advances in computer vision to identify pollen grains using their microscopic images, thereby opening up opportunities for the development of automated systems that support plant traceability and quality control of honey. Full article
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15 pages, 1750 KB  
Article
AIpollen: An Analytic Website for Pollen Identification Through Convolutional Neural Networks
by Xingchen Yu, Jiawen Zhao, Zhenxiu Xu, Junrong Wei, Qi Wang, Feng Shen, Xiaozeng Yang and Zhonglong Guo
Plants 2024, 13(22), 3118; https://doi.org/10.3390/plants13223118 - 5 Nov 2024
Cited by 6 | Viewed by 2165
Abstract
With the rapid development of artificial intelligence, deep learning has been widely applied to complex tasks such as computer vision and natural language processing, demonstrating its outstanding performance. This study aims to exploit the high precision and efficiency of deep learning to develop [...] Read more.
With the rapid development of artificial intelligence, deep learning has been widely applied to complex tasks such as computer vision and natural language processing, demonstrating its outstanding performance. This study aims to exploit the high precision and efficiency of deep learning to develop a system for the identification of pollen. To this end, we constructed a dataset across 36 distinct genera. In terms of model selection, we employed a pre-trained ResNet34 network and fine-tuned its architecture to suit our specific task. For the optimization algorithm, we opted for the Adam optimizer and utilized the cross-entropy loss function. Additionally, we implemented ELU activation function, data augmentation, learning rate decay, and early stopping strategies to enhance the training efficiency and generalization capability of the model. After training for 203 epochs, our model achieved an accuracy of 97.01% on the test set and 99.89% on the training set. Further evaluation metrics, such as an F1 score of 95.9%, indicate that the model exhibits good balance and robustness across all categories. To facilitate the use of the model, we develop a user-friendly web interface. Users can upload images of pollen grains through the URL link provided in this article) and immediately receive predicted results of their genus names. Altogether, this study has successfully trained and validated a high-precision pollen grain identification model, providing a powerful tool for the identification of pollen. Full article
(This article belongs to the Special Issue Advances in Artificial Intelligence for Plant Research)
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21 pages, 3754 KB  
Article
YOLOv8-Pearpollen: Method for the Lightweight Identification of Pollen Germination Vigor in Pear Trees
by Weili Sun, Cairong Chen, Tengfei Liu, Haoyu Jiang, Luxu Tian, Xiuqing Fu, Mingxu Niu, Shihao Huang and Fei Hu
Agriculture 2024, 14(8), 1348; https://doi.org/10.3390/agriculture14081348 - 12 Aug 2024
Cited by 1 | Viewed by 1616
Abstract
Pear trees must be artificially pollinated to ensure yield, and the efficiency of pollination and the quality of pollen germination affect the size, shape, taste, and nutritional value of the fruit. Detecting the pollen germination vigor of pear trees is important to improve [...] Read more.
Pear trees must be artificially pollinated to ensure yield, and the efficiency of pollination and the quality of pollen germination affect the size, shape, taste, and nutritional value of the fruit. Detecting the pollen germination vigor of pear trees is important to improve the efficiency of artificial pollination and consequently the fruiting rate of pear trees. To overcome the limitations of traditional manual detection methods, such as low efficiency and accuracy and high cost, and to meet the requirements of screening high-quality pollen to promote the yield and production of fruit trees, we proposed a detection method for pear pollen germination vigor named YOLOv8-Pearpollen, an improved version of YOLOv8-n. A pear pollen germination dataset was constructed, and the image was enhanced using Blend Alpha to improve the robustness of the data. A combination of knowledge distillation and model pruning was used to reduce the complexity of the model and the difficulty of deployment in hardware facilities while ensuring that the model achieved or approached the detection effect of a large-volume model that can adapt to the actual requirements of agricultural production. Various ablation tests on knowledge distillation and model pruning were conducted to obtain a high-quality lightweighting method suitable for this model. Test results showed that the mAP of YOLOv8-Pearpollen reached 96.7%. The Params, FLOPs, and weights were only 1.5 M, 4.0 G, and 3.1 MB, respectively, and the detection speed was 147.1 FPS. A high degree of lightweighting and superior detection accuracy were simultaneously achieved. Full article
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27 pages, 4105 KB  
Article
Pollen Grain Classification Using Some Convolutional Neural Network Architectures
by Benjamin Garga, Hamadjam Abboubakar, Rodrigue Saoungoumi Sourpele, David Libouga Li Gwet and Laurent Bitjoka
J. Imaging 2024, 10(7), 158; https://doi.org/10.3390/jimaging10070158 - 28 Jun 2024
Cited by 12 | Viewed by 2508
Abstract
The main objective of this work is to use convolutional neural networks (CNN) to improve the performance in previous works on their baseline for pollen grain classification, by improving the performance of the following eight popular architectures: InceptionV3, VGG16, VGG19, ResNet50, NASNet, Xception, [...] Read more.
The main objective of this work is to use convolutional neural networks (CNN) to improve the performance in previous works on their baseline for pollen grain classification, by improving the performance of the following eight popular architectures: InceptionV3, VGG16, VGG19, ResNet50, NASNet, Xception, DenseNet201 and InceptionResNetV2, which are benchmarks on several classification tasks, like on the ImageNet dataset. We use a well-known annotated public image dataset for the Brazilian savanna, called POLLEN73S, composed of 2523 images. Holdout cross-validation is the name of the method used in this work. The experiments carried out showed that DenseNet201 and ResNet50 outperform the other CNNs tested, achieving results of 97.217% and 94.257%, respectively, in terms of accuracy, higher than the existing results, with a difference of 1.517% and 0.257%, respectively. VGG19 is the architecture with the lowest performance, achieving a result of 89.463%. Full article
(This article belongs to the Topic Applications in Image Analysis and Pattern Recognition)
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17 pages, 4166 KB  
Article
Automatic Detection of Rice Blast Fungus Spores by Deep Learning-Based Object Detection: Models, Benchmarks and Quantitative Analysis
by Huiru Zhou, Qiang Lai, Qiong Huang, Dingzhou Cai, Dong Huang and Boming Wu
Agriculture 2024, 14(2), 290; https://doi.org/10.3390/agriculture14020290 - 10 Feb 2024
Cited by 11 | Viewed by 3128
Abstract
The severity of rice blast and its impacts on rice yield are closely related to the inoculum quantity of Magnaporthe oryzae, and automatic detection of the pathogen spores in microscopic images can provide a rapid and effective way to quantify pathogen inoculum. [...] Read more.
The severity of rice blast and its impacts on rice yield are closely related to the inoculum quantity of Magnaporthe oryzae, and automatic detection of the pathogen spores in microscopic images can provide a rapid and effective way to quantify pathogen inoculum. Traditional spore detection methods mostly rely on manual feature extraction and shallow machine learning models, and are mostly designed for the indoor counting of a single spore class, which cannot handle the interference of impurity particles in the field. This study achieved automatic detection of rice blast fungus spores in the mixture with other fungal spores and rice pollens commonly encountered under field conditions by using deep learning based object detection techniques. First, 8959 microscopic images of a single spore class and 1450 microscopic images of mixed spore classes, including the rice blast fungus spores and four common impurity particles, were collected and labelled to form the benchmark dataset. Then, Faster R-CNN, Cascade R-CNN and YOLOv3 were used as the main detection frameworks, and multiple convolutional neural networks were used as the backbone networks in training of nine object detection algorithms. The results showed that the detection performance of YOLOv3_DarkNet53 is superior to the other eight algorithms, and achieved 98.0% mean average precision (intersection over union > 0.5) and an average speed of 36.4 frames per second. This study demonstrated the enormous application potential of deep object detection algorithms in automatic detection and quantification of rice blast fungus spores. Full article
(This article belongs to the Special Issue Detection, Identification and Control of Plant Pathogens)
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16 pages, 17431 KB  
Article
Weakly Supervised Collaborative Learning for Airborne Pollen Segmentation and Classification from SEM Images
by Jianqiang Li, Qinlan Xu, Wenxiu Cheng, Linna Zhao, Suqin Liu, Zhengkai Gao, Xi Xu, Caihua Ye and Huanling You
Life 2023, 13(1), 247; https://doi.org/10.3390/life13010247 - 16 Jan 2023
Cited by 4 | Viewed by 2617
Abstract
Existing pollen identification methods heavily rely on the scale and quality of pollen images. However, there are many impurities in real-world SEM images that should be considered. This paper proposes a collaborative learning method to jointly improve the performance of pollen segmentation and [...] Read more.
Existing pollen identification methods heavily rely on the scale and quality of pollen images. However, there are many impurities in real-world SEM images that should be considered. This paper proposes a collaborative learning method to jointly improve the performance of pollen segmentation and classification in a weakly supervised manner. It first locates pollen regions from the raw images based on the detection model. To improve the classification performance, we segmented the pollen grains through a pre-trained U-Net using unsupervised pollen contour features. The segmented pollen regions were fed into a deep convolutional neural network to obtain the activation maps, which were used to further refine the segmentation masks. In this way, both segmentation and classification models can be collaboratively trained, supervised by just pollen contour features and class-specific information. Extensive experiments on real-world datasets were conducted, and the results prove that our method effectively avoids impurity interference and improves pollen identification accuracy (86.6%) under the limited supervision (around 1000 images with image-level labels). Full article
(This article belongs to the Section Plant Science)
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17 pages, 4244 KB  
Article
FPGA Implementation of a Convolutional Neural Network and Its Application for Pollen Detection upon Entrance to the Beehive
by Tomyslav Sledevič, Artūras Serackis and Darius Plonis
Agriculture 2022, 12(11), 1849; https://doi.org/10.3390/agriculture12111849 - 4 Nov 2022
Cited by 11 | Viewed by 5042
Abstract
The condition of a bee colony can be predicted by monitoring bees upon hive entrance. The presence of pollen grains gives beekeepers significant information about the well-being of the bee colony in a non-invasive way. This paper presents a field-programmable-gate-array (FPGA)-based pollen detector [...] Read more.
The condition of a bee colony can be predicted by monitoring bees upon hive entrance. The presence of pollen grains gives beekeepers significant information about the well-being of the bee colony in a non-invasive way. This paper presents a field-programmable-gate-array (FPGA)-based pollen detector from images obtained at the hive entrance. The image dataset was acquired at native entrance ramps from six different hives. To evaluate and demonstrate the performance of the system, various densities of convolutional neural networks (CNNs) were trained and tested to find those suitable for pollen grain detection at the chosen image resolution. We propose a new CNN accelerator architecture that places a pre-trained CNN on an SoC FPGA. The CNN accelerator was implemented on a cost-optimized Z-7020 FPGA with 16-bit fixed-point operations. The kernel binarization and merging with the batch normalization layer were applied to reduce the number of DSPs in the multi-channel convolutional core. The estimated average performance was 32 GOPS for a single convolutional core. We found that the CNN with four convolutional and two dense layers gave a 92% classification accuracy, and it matched those declared for state-of-the-art methods. It took 8.8 ms to classify a 512 × 128 px frame and 2.4 ms for a 256 × 64 px frame. The frame rate of the proposed method outperformed the speed of known pollen detectors. The developed pollen detector is cost effective and can be used as a real-time image classification module for hive status monitoring. Full article
(This article belongs to the Section Seed Science and Technology)
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16 pages, 4055 KB  
Article
Automatic Classification of Pollen Grain Microscope Images Using a Multi-Scale Classifier with SRGAN Deblurring
by Xingyu Chen and Fujiao Ju
Appl. Sci. 2022, 12(14), 7126; https://doi.org/10.3390/app12147126 - 14 Jul 2022
Cited by 8 | Viewed by 5246
Abstract
Pollen allergies are seasonal epidemic diseases that are accompanied by high incidence rates, especially in Beijing, China. With the development of deep learning, key progress has been made in the task of automatic pollen grain classification, which could replace the time-consuming and laborious [...] Read more.
Pollen allergies are seasonal epidemic diseases that are accompanied by high incidence rates, especially in Beijing, China. With the development of deep learning, key progress has been made in the task of automatic pollen grain classification, which could replace the time-consuming and laborious manual identification process using a microscope. In China, few pioneering works have made significant progress in automatic pollen grain classification. Therefore, we first constructed a multi-class and large-scale pollen grain dataset for the Beijing area in preparation for the task of pollen classification. Then, a deblurring pipeline was designed to enhance the quality of the pollen grain images selectively. Moreover, as pollen grains vary greatly in size and shape, we proposed an easy-to-implement and efficient multi-scale deep learning architecture. Our experimental results showed that our architecture achieved a 97.7% accuracy, based on the Resnet-50 backbone network, which proved that the proposed method could be applied successfully to the automatic identification of pollen grains in Beijing. Full article
(This article belongs to the Topic Computer Vision and Image Processing)
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15 pages, 14646 KB  
Article
Pollen Grain Classification Based on Ensemble Transfer Learning on the Cretan Pollen Dataset
by Nikos Tsiknakis, Elisavet Savvidaki, Georgios C. Manikis, Panagiota Gotsiou, Ilektra Remoundou, Kostas Marias, Eleftherios Alissandrakis and Nikolas Vidakis
Plants 2022, 11(7), 919; https://doi.org/10.3390/plants11070919 - 29 Mar 2022
Cited by 15 | Viewed by 3148
Abstract
Pollen identification is an important task for the botanical certification of honey. It is performed via thorough microscopic examination of the pollen present in honey; a process called melissopalynology. However, manual examination of the images is hard, time-consuming and subject to inter- and [...] Read more.
Pollen identification is an important task for the botanical certification of honey. It is performed via thorough microscopic examination of the pollen present in honey; a process called melissopalynology. However, manual examination of the images is hard, time-consuming and subject to inter- and intra-observer variability. In this study, we investigated the applicability of deep learning models for the classification of pollen-grain images into 20 pollen types, based on the Cretan Pollen Dataset. In particular, we applied transfer and ensemble learning methods to achieve an accuracy of 97.5%, a sensitivity of 96.9%, a precision of 97%, an F1 score of 96.89% and an AUC of 0.9995. However, in a preliminary case study, when we applied the best-performing model on honey-based pollen-grain images, we found that it performed poorly; only 0.02 better than random guessing (i.e., an AUC of 0.52). This indicates that the model should be further fine-tuned on honey-based pollen-grain images to increase its effectiveness on such data. Full article
(This article belongs to the Section Plant Cell Biology)
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