Search Results (316)

This study sought to quantify and characterize diverse rootstock scion interactions in cacao around graft compatibility, disease resistance, nutrient use efficiency, vigor traits, and translocation of nonstructural carbohydrates. In total, 106 grafts were performed with three scion cultivars (Matina 1/6, Criollo 22, Pound 7) and nine diverse open-pollinated seedling populations (BYNC, EQX 3348, GNV 360, IMC 14, PA 107, SCA 6, T 294, T 384, T 484). We found evidence for both local and translocated graft incompatibility. Cross sections and Micro-XCT imaging revealed anatomical anomalies, including necrosis and cavitation at the junction and accumulation of starch in the rootstock directly below the graft junction. Scion genetics were a significant factor in explaining differences in graft take, and graft take varied from 47% (Criollo 22) to 72% (Pound 7). Rootstock and scion identity both accounted for differences in survival over the course of the 30-month greenhouse study, with a low of 28.5% survival of Criollo 22 scions and a high of 72% for Pound 7 scions. Survival by rootstocks varied from 14.3% on GNV 360 to 100% survival on T 294 rootstock. A positive correlation of 0.34 (p = 0.098) was found between the graft success of different rootstock–scion combinations and their kinship coefficient, suggesting that relatedness of stock and scion could be a driver of incompatibility. Significant rootstock–scion effects were also observed for nutrient use efficiency, plant vigor, and resistance to Phytophthora palmivora. These findings, while preliminary in nature, highlight the potential of rootstock breeding to improve plant nutrition, resilience, and disease resistance in cacao. Full article

Strawberry planting requires different amounts of soil water-holding capacity and fertilizer at different growth stages. Determining the stages of strawberry growth has important guiding significance for irrigation, fertilization, and picking. Quick and accurate identification of strawberry plants at different stages can provide important information for automated strawberry planting management. We propose an improved multistage identification model for strawberry based on the YOLOv9 algorithm—the ASHM-YOLOv9 model. The original YOLOv9 showed limitations in detecting strawberries at different growth stages, particularly lower precision in identifying occluded fruits and immature stages. We enhanced the YOLOv9 model by introducing the Alterable Kernel Convolution (AKConv) to improve the recognition efficiency while ensuring precision. The squeeze-and-excitation (SE) network was added to increase the network’s capacity for characteristic derivation and its ability to fuse features. Haar wavelet downsampling (HWD) was applied to optimize the Adaptive Downsampling module (Adown) of the initial model, thereby increasing the precision of object detection. Finally, the CIoU function was replaced by the Minimum Point Distance based IoU (MPDIoU) loss function to effectively solve the problem of low precision in identifying bounding boxes. The experimental results demonstrate that, under identical conditions, the improved model achieves a precision of 97.7%, a recall of 97.2%, mAP50 of 99.1%, and mAP50-95 of 90.7%, which are 0.6%, 3.0%, 0.7%, and 7.4% greater than those of the original model, respectively. The parameters, model size, and floating-point calculations were reduced by 3.7%, 5.6% and 3.8%, respectively, which significantly boosted the performance of the original model and outperformed that of the other models. Experiments revealed that the model could provide technical support for the multistage identification of strawberry planting. Full article

The agronomic effectiveness of biofertilizers is influenced by strain origin, genetic identity, crop genotype, soil type, and environmental conditions. For best results, both the plant and rhizobia strain must be adapted to the common harsh soil conditions in the tropics. While plant varieties have changed over the years, complementary research on new strains effectiveness under varying soil fertility conditions has lagged in southern Africa. Seven field experiments were established in the main soybean-producing areas of Zimbabwe in the north, central, and north–east regions to evaluate agronomic benefits of new rhizobia strains against the current exotic commercial strain (MAR1491). One site was irrigated (site 3), and the other six sites were rainfed (sites 1, 2, 4, 5, 6, and 7). While trends in inoculation response varied from site to site due to site conditions, inoculation with the strains NAZ15, NAZ25, and NAK128 consistently yielded high grain yields, which were similar to the current commercial strain MAR1491 and to application of mineral fertilizer (51.75 and 100 kg N ha⁻¹). Grain yield levels were generally below 2 t ha⁻¹ for sites 2, 3, and 5 and above 2 t ha⁻¹ for sites 1, 4, and 6, while for the irrigated site 3, they ranged upwards of 3 t ha⁻¹. When irrigated, all strains except NAK9 performed similarly in terms of grain yields and aboveground N uptake. Further testing on the inclusion of the indigenous strains NAZ15, NAZ25, and NAK128 in multi-strain commercial inoculant production targeting application in regions and soils where they excel beyond the current exotic strain MAR1491 is recommended. Full article

The use of mineral fertilisers has increased in recent years, but this has had a negative effect on the environment, including causing the water in rivers and lakes to become too rich in nutrients, a process known as eutrophication. Current research focuses on producing fertiliser materials that are environmentally friendly. The aim of this study was to examine the impact of novel specialised organic-mineral fertilisers (OMFs: NP 24-12, NP 10-10, and NP 10-10 Zn⁺) on the yield and chemical composition of maize. These fertilisers were compared with a control (no fertiliser) and with other fertilisers (mixture of commercial fertilisers (MCFs): NP 24-12 and NP 10-10) that were used as a reference. All fertilisers increased the SPAD index at the fifth leaf unfolded stage of maize, with the majority (apart from OMF NP 10-10) also increasing it at the panicle emergence stage. MCF NP 10-10 had the most positive effect on the plant height, while OMF NP 10-10 had the least positive effect. All fertilisers had a positive effect on maize growth and development, with MCFs NP 10-10 and NP 24-12 having by far the strongest effect on increasing crop yields. The yield of plants fertilised with OMFs NP 24-12, NP 10-10, and NP 10-10 Zn⁺ was lower than the yields of plants fertilised with MCF NP 24-12 and MCF NP 10-10. OMF NP 10-10 caused a greater increase in the contents of all elements, and OMF NP 24-12 caused a greater increase in most elements (except P and Ca) in maize than MCFs did at an identical NP ratio. OMF NP 10-10 Zn⁺ was found to have a significant impact on the mineral composition of maize, resulting in a decline in Ca and P levels, along with a notable increase in Mg, Zn, and Cu concentrations. The most significant differences were observed for Cu and Zn. The OMFs, notably NP 24-12 and NP 10-10, exhibited a comparatively diminished acidifying impact in comparison with the MCFs. The application of fertilisers resulted in a significant increase in soil nutrient levels, with most fertilisers increasing the soil N, P, and Zn contents. Additionally, the OMFs led to an increase in Cu. However, MCFs NP 24-12 and NP 10-10 reduced the soil Cu and Mn contents. Studies should include other species as they have different needs. Field experiments are also needed. Full article

An increasing number of soils, including those in EU countries, are affected by organic matter deficiency and the deterioration of nutrients, and using mineral fertilizers is often associated with negative environmental impacts. One of the basic recommendations for sustainable agriculture is to increase the proportion of organic fertilizers in crop production and preserve soil biodiversity. An increasingly common organic fertilizer is biogas plant digestate, the physical and chemical properties of which depend primarily on the waste material used in biogas production. However, the fertilizer value of this additive and its effects on the soil environment, including beneficial organisms, remain insufficiently studied. Soil macrofauna, particularly earthworms, play a crucial role in soil ecosystems, because they significantly impact the presence of plant nutrients, actively participate in forming soil structures, and strongly influence organic matter dynamics. The present study was undertaken to determine the effects of fertilizing a silt loam soil with the solid fraction of digestate in monoculture crop production on earthworm community characteristics and the resulting changes in selected soil physicochemical properties. The research was conducted at a single site, so the original soil characteristics across the experimental plots were identical. Plots were treated annually (for 3 years; 2021–2023) with different levels of digestate: DG100 (100% of the recommended rate; 30 t ha⁻¹), DG75 (75% of the recommended rate; 22.5 t ha⁻¹), DG50 (15 t ha⁻¹), DG25 (7.5 t ha⁻¹), and CL (a control plot without fertilizer). An electrical method was used to extract earthworms. Those found at the study site belonged to seven species representing three ecological groups: Dendrodrilus rubidus (Sav.), Lumbricus rubellus (Hoff.), and Dendrobaena octaedra (Sav.) (epigeics); Aporrectodea caliginosa (Sav.), Aporrectodea rosea (Sav.), and Octolasion lacteum (Örley) (endogeics); and Lumbricus terrestris (L.) (anecics). Significant differences in the abundance and biomass of earthworms were found between the higher level treatments (DG100, DG75, and DG50), and the lowest level of fertilization and the control plot (DG25 and CL). The DG25 and CL plots showed an average of 24.7% lower earthworm abundance and 22.8% lower biomass than the other plots. There were no significant differences in the earthworm metrics between the plots within each of the two groups (DG100, DG75, and DG50; and DG25 and CL). The most significant influence on the average abundance and average biomass of Lumbricidae was probably exerted by soil moisture and the annual dosage of digestate. A significant increase in the abundance and biomass of Lumbricidae was shown at plots DG100, DG75, and DG50 in the three successive years of the experiment. The different fertilizer treatments were found to have different effects on selected soil parameters. No significant differences were found among the values of the analyzed soil traits within each plot in the successive years of the study. Full article

As high-CBD cannabis (Cannabis sativa L.) gains legal and commercial relevance in the United States, studies evaluating how external inputs impact critical traits remain limited. This study investigates the effects of methyl jasmonate (MeJA), ammonium bicarbonate (AB), and the genetic source (mother plant identity) on the growth and secondary metabolite traits of indoor cannabis. Plants were treated with 1 mM MeJA and/or AB under controlled conditions, and key traits, such as plant height, chlorophyll content, biomass, trichome density, and cannabinoid concentration, were measured. The MeJA treatment led to a significant 32% increase in trichome density. However, it did not significantly alter CBD or THC concentrations. The AB treatment enhanced vegetative growth, increasing chlorophyll content and plant height while reducing CBD concentrations, but the biomass gains could compensate for the lower cannabinoid in the total production. An interaction between MeJA and AB altered the CBD content, suggesting that MeJA may mitigate AB’s negative effect on cannabinoid synthesis. The genetic source significantly influenced most of the measured traits, highlighting the role of the genotype in trait expression and the importance of clonal consistency. These findings highlight the complex dynamics of external inputs and genetic factors in cannabis production, emphasizing the need for further research to optimize cultivation strategies. Future studies should refine input combinations and doses to improve both yield and cannabinoid profiles. Full article

A plant species in a community often grows with some other plant species. While many studies have assessed interspecific interactions between two target plant species, few have considered the impacts of the other plant species (e.g., the third, fourth, and fifth plant species) on these interactions. To assess the impacts, we grew one seedling of each of the five herbaceous plant species that are common in China (Cynodon dactylon, Plantago asiatica, Taraxacum mongolicum, Nepeta cataria, and Leonurus japonicus) alone (no competition) or with one seedling of one, two, three, or four of the other species. The presence of a neighbor plant generally reduced the growth of the target species, suggesting that the interspecific relationships were mostly competitive. The presence of other neighbor species (the third, fourth, and fifth species) could alter the interspecific interactions between two target species, but such effects varied depending on both the identity of the target species and the identity of the other species. Additionally, the effects of the third species depended little on the presence of the fourth and fifth species. We conclude that interspecific interactions between two plant species are commonly regulated by the presence of other species, facilitating species coexistence. However, our findings do not support the idea that the impacts of the fourth and fifth species on interactions among three plant species are common. This study highlights the complex interactions among multiple plant species within a community and also the importance of including these high-order interactions when modelling community dynamics and species coexistence. Full article

Miraruira is a medicinal plant-based product (MPBP) that is widely used in the state of Amazonas for the treatment of diabetes, though its botanical identity remains unclear, which raises concerns about authenticity and therapeutic consistency. One solution to this problem is the use of mass spectrometry-based approaches, which have emerged as powerful tools for verifying botanical origin based on chemical composition. Thus, to confirm the botanical authenticity of miraruira, direct-injection mass spectrometry (DI-MS) and chemometric analyses (PCA and HCA) were conducted on methanol fractions of Salacia impressifolia and Connarus ruber, both suspected sources of miraruira, as well as commercial samples obtained in street markets in Manaus, Brazil. Additionally, the hexane extracts of C. ruber and the commercial samples were screened for benzoquinones using DI-MS, as these compounds are recurrent in the genus Connarus. The DI-MS and PCA analyses revealed distinct chemical profiles for each species, and identified mangiferin and epicatechin as chemical markers for S. impressifolia and C. ruber, respectively. Furthermore, PCA demonstrated that all the commercial samples exhibited chemical profiles closely aligned with C. ruber. However, the HCA indicated variability among these samples, suggesting C. ruber or related Connarus species are the primary sources of miraruira. Moreover, embelin, rapanone, and suberonone were identified as the main compounds in the hexane extracts of C. ruber and the commercial products. This study successfully confirmed the botanical authenticity of miraruira, identified key bioactive compounds related to its traditional use in the treatment of diabetes symptoms, and demonstrated the effectiveness of DI-MS as a valuable tool for addressing authenticity issues in MPBPs. Full article

The major objective was to investigate the protective capabilities of endophytic bacterial strains isolated from a number of medicinal plant species towards Aspergillus spp. secured from the internal tissues of fungi-infected peanuts. Among 32 fungal isolates surveyed for mycotoxin production in various culture media (PDA, RBCA, YES, CA), 10 isolates qualitatively producing AFB₁, besides 10 OTA-producers, were assayed by HPLC for quantitative toxin production. Aspergillus spp. isolate Be 13 produced an extraordinary quantity of 1859.18 μg mL⁻¹ AFB₁, against the lowest toxin level of 280.40 μg mL⁻¹ produced by the fungus isolate IS 4. The estimated amounts of OTA were considerably lower and fell in the range 0.88–6.00 μg mL⁻¹; isolate Sa 1 was superior, while isolate Be 7 seemed inferior. Based on ITS gene sequencing, the highly toxigenic Aspergillus spp. isolates Be 13 and Sa 1 matched the description of A. novoparasiticus and A. ochraceus, respectively, ochraceus, respectively, which are present in GenBank with identity exceeding 99%. According to 16S rRNA gene sequencing, these antagonists labeled Ar6, Ma27 and So34 showed the typical characteristics of Pseudomonas aeruginosa, Bacillus subtilis and Bacillus velezensis, respectively, with similarity percentages of 99–100. The plant growth-promoting activity measurements of the identified endophytes indicated the production of 16.96–80.00 μg/100 mL culture medium of IAA. Phosphate-solubilizing capacity varied among endophytes from 2.50 to 21.38 μg/100 mL. The polysaccharide production pool of bacterial strains ranged between 2.74 and 6.57 mg mL⁻¹. P. aeruginosa Ar6 and B. velezensis successfully produced HCN, but B. subtilis failed. The in vitro mycotoxin biodegradation potential of tested bacterial endophytes indicated the superiority of B. velezensis in degrading both mycotoxins (AFB₁-OTA) with average percentage of 88.7; B. subtilis ranked thereafter (85.6%). The 30-day old peanut (cv. Giza 6) seedlings grown in gnotobiotic system severely injured due to infection with AFB₁/OTA-producing fungi, an effect expressed in significant reductions in shoot and root growth traits. Simultaneous treatment with the endophytic antagonists greatly diminished the harmful impact of the pathogens; B. velezensis was the pioneer, not P. aeruginosa Ar6. In conclusion, these findings proved that several endophytic bacterial species have the potential as alternative tools to chemical fungicides for protecting agricultural commodities against mycotoxin-producing fungi. Full article

Various metabolic modulators have been widely used in recent years to increase the accumulation of desired secondary metabolites in medicinal plants, although most studies to date have focused on in vitro systems. Although simpler and cheaper, their potential application in vivo is still limited. Therefore, the aim of this study was to compare the effect of three chemically different elicitors (150 mg/L chitosan lactate—ChL; 10 mg/L selenium as selenite—Se; 100 mg/L salicylic acid—SA) applied to the soil substrate on some aspects of the secondary metabolism and physiological responses of Chelidonium majus L. Using HPLC-DAD, six isoquinoline alkaloids were identified and quantified in shoot extracts. LC-ESI-TOF-MS analysis confirmed the molecular identity of all target alkaloids, supporting the identification. The strongest stimulatory effect on the accumulation of protopine, berberine, and allocryptopine was observed with the Se and SA treatment, whereas ChL was less effective. In turn, the dominant alkaloids (coptisine and chelidonine) remained unaffected. There was also an increase in total phenolic compounds, but not in soluble flavonols. The elicitor treatments caused an increase in the antioxidant activity of the plant extracts obtained. Regardless of the metabolic modulator type, the strongest effect was generally observed on days 7 and 10 after application. No visual signs of toxicity and no effect on shoot biomass were found, although some elicitor-induced changes in the oxidative status (increased H₂O₂ accumulation and enhanced lipid peroxidation) and free proline levels in leaves were observed. We suggest that Se or SA can be applied to C. majus grown in a controlled pot culture to obtain high-quality raw material and extracts with increased contents of valuable specialized metabolites and enhanced antioxidant capacity. Full article

Symbiotic bacteria play a pivotal role in the biology and ecology of herbivorous insects, affecting host growth and adaptation. However, the effects of host identity on the symbiotic microbiota of gall-inducing insects remain less explored. In this study, we utilized high-throughput sequencing to investigate the effects of different oak hosts on the structure and diversity of the symbiotic microbial community in the asexual larvae of the gall-inducing wasp Trichagalma acutissimae. Host plant species significantly altered the alpha and beta diversity of symbiotic microbiota of T. acutissimae. At the phylum level, Proteobacteria was the predominant microflora in both groups, with significantly higher abundance in larvae parasitizing Quercus acutissima than in those parasitizing Q. variabilis. Pseudomonas, which has been identified as responsible for tannin decomposition, was the most dominant genus in T. acutissimae larvae infesting both hosts. LEfSe analysis revealed substantial differences in the symbiotic microbial communities between the two hosts while also highlighting some commonalities. Functional prediction analysis indicated no significant difference in the functional roles of symbiotic bacteria between larvae infesting the two hosts. These findings suggest that the symbiotic microbiome of T. acutissimae larvae is influenced by host plant species, yet different microbial compositions may perform similar functions, implying the potential role of symbiotic microbiota in the adaptation to high-tannin oak leaves. This research enhances our understanding of the symbiotic relationship between forest pests and their associated microbes. Full article

The Qinghai–Tibet Plateau is a key region for biodiversity conservation, where alpine grasslands are ecologically important. While previous studies have mainly addressed vegetation, ecosystem processes, and soil microbes, phyllosphere microorganisms are essential for nutrient cycling, plant health, and stress tolerance. However, their communities remain poorly understood compared to those in soil. The relative influence of host identity and environmental conditions on shaping phyllosphere microbial diversity and community assembly remains uncertain. In this study, we characterized phyllosphere bacterial and fungal communities of the phyllosphere at two alpine steppe sites with similar vegetation but climatic conditions: the Qilian Mountains (QLM) and the Qinghai Lake region (LQS). At both sites, Cyanobacteriota and Ascomycota were the predominant bacterial and fungal taxa, respectively. Microbial α-diversity did not differ significantly between the two regions, implying that host-associated mechanisms may stabilize within-site diversity. In contrast, β-diversity exhibited clear spatial differentiation. In QLM, bacterial β-diversity was significantly correlated with mean annual precipitation, while fungal α- and β-diversity were associated with soil nutrient levels (including nitrate, ammonium, available potassium, and phosphorus) and vegetation coverage. At LQS, the β-diversity of both bacterial and fungal communities was strongly influenced by soil electrical conductivity, and fungal communities were further shaped by vegetation cover. Community assembly processes were predominantly stochastic at both sites, although deterministic patterns were more pronounced in QLM. Variability in moisture availability contributed to random bacterial assembly at LQS, while increased environmental heterogeneity promoted deterministic assembly in fungal communities. The elevated diversity of microbes and plants in QLM also reinforced deterministic processes. Overall, our findings support a host–environment interaction hypothesis, indicating that host factors primarily govern α-diversity, while climatic and soil-related variables have stronger effects on β-diversity and microbial assembly dynamics. These insights advance our understanding of how phyllosphere microbial communities may respond to environmental change in alpine ecosystems. Full article

Triadica sebifera, an economically and medicinally valuable tree species native to China, was investigated for its in vitro regeneration potential using leaf explants from nodal cuttings of young stems and sprouts. This study evaluated the effects of basal media, plant growth regulators (PGRs), explant sources, and incision methods on adventitious shoot induction, supplemented by histological analysis. The highest shoot regeneration frequency (98.89%) and maximum shoot number (72) were achieved via direct organogenesis using sucker-derived nodal cuttings cultured on MS medium with 2 mg/L 6- benzyladenine (6-BA), 0.3 mg/L kinetin (KT), and 0.2 mg/L α-naphthaleneacetic acid (NAA). Under identical conditions, branch-derived explants showed lower regeneration (84.44%, 64 shoots). Transverse midvein incision proved most effective, with sucker-derived leaves exhibiting superior regeneration. Shoots elongated completely (100%) on Murashige and Skoog (MS) medium containing 0.3 mg/L 6-BA, 0.03 mg/L NAA, and activated charcoal. Rooting was optimal on MS medium with 0.3 mg/L indole-3-butyric acid (IBA), yielding a 98% acclimatization survival rate. Histological analysis revealed de novo meristem formation from parenchyma cells, confirming direct organogenesis without callus intermediation, further validating the enhanced regenerative capacity of sprout-derived explants. This efficient in vitro regeneration system provides a foundation for large-scale propagation and germplasm conservation of T. sebifera, while offering insights for woody plant regeneration studies. Full article

Ferulic acid esterase (FAE) plays an important role in plant fiber degradation by catalyzing the hydrolysis of lignocellulosic structures. FAE-producing lactic acid bacteria (LAB), as potential probiotics, can improve ruminant digestion and gut health. In this study, two LAB strains (Q2 and Q6) with FAE activity were isolated from sheep rumen. Based on 16S rDNA sequencing, they were identified as Lactobacillus mucosae and Streptococcus equinus, respectively. Compared to Q2, Q6 demonstrated higher enzyme production, lactic acid yield, broader carbohydrate utilization, and stronger antimicrobial activity. The whole genome sequencing revealed Q2 and Q6 possess genomes of 2.14 Mbp and 1.95 Mbp, with GC contents of 46.81% and 37.30%, respectively. Q2 and Q6 exhibited the highest average nucleotide identity (ANI) with L. mucosae DSM 13345 (97.30%) and S. equinus ATCC 33317 (97.92%), respectively. The strains harbored 2101 and 1928 predicted genes, including 1984 and 1837 coding sequences (CDSs), respectively. GO enrichment analysis showed the CDSs predominantly associated with membranes (or cells), catalytic activity, and metabolic processes. KEGG analysis revealed both strains enriched in metabolic pathways, with Q6 showing a notably higher number of proteins in the ABC transporters and quorum sensing than Q2. Carbohydrate-active enzymes database (CAZy) profiling identified 75 CAZymes in Q2 and 93 CAZymes in Q6, with each strain containing one novel fae gene. Safety assessment identified 1 and 33 pathogenic genes, along with 2 and 4 putative antimicrobial peptide genes, in Q2 and Q6, respectively. Notably, Q6 carried 12 virulence factor genes. These findings suggest Q2 exhibits a superior safety profile compared to Q6, indicating a higher probability of Q2 being an effective probiotic strain. In conclusion, both LAB strains produce FAE. L. mucosae Q2 demonstrates suitability as a direct-fed probiotic for livestock, while Q6 exhibits potential as a silage inoculant, though comprehensive safety evaluations are required prior to its application. Full article

Climate-change-induced drought threatens forest restoration by limiting seedling establishment. To address this, we developed synthetic bacterial communities (SynComs) tailored to support drought tolerance in two Mediterranean tree species, Quercus pubescens and Sorbus domestica. Bacteria were isolated from forest soil exposed to long-term drought, sampling across soil depths and root-associated compartments. We selected strains with key plant-beneficial traits, including exopolysaccharide (EPS) production, hormone synthesis (auxin, ABA), siderophore release, and osmotic tolerance. SynComs were assembled based on functional complementarity and ecological origin. Biofilm assays showed that even weak individual producers could enhance community-level performance. After initial screening on Arabidopsis thaliana, the most and least effective SynComs were tested on Q. pubescens and S. domestica seedlings. Compared to controls, the best-performing SynComs reduced the proportion of drought-symptomatic seedlings by 47% in Q. pubescens and 71% in S. domestica, outperforming single-strain inoculants. Notably, EPS-rich SynCom B aligned with the conservative root traits of Q. pubescens, while hormone-rich SynCom F matched the acquisitive strategy of S. domestica. Predictive modeling identified bacterial identity and symptom timing as key predictors of drought resilience. Our results highlight the value of matching microbial traits with plant strategies and drought context for climate-smart forest restoration. Full article