Search Results (5,105)

Strigolactones (SLs), as a class of novel plant hormones, play important roles in the regulation of plant branching. However, their function in branch development of wintersweet remains unclear. In this study, a gene involved in SLs biosynthesis, CpD27, was identified and isolated from wintersweet. The sequence characteristics, expression patterns, subcellular localization, and functional analysis through heterologous expression in Arabidopsis thaliana were investigated. Multiple sequence alignment showed that CpD27 contains the conserved D27 protein domain DUF4033. Quantitative real-time PCR analysis revealed that CpD27 is expressed in various vegetative organs of wintersweet, with the highest expression in leaves, followed by axillary buds. It is also expressed in all floral organs, with the highest expression level in the outer petals. CpD27 expression is induced by hormones (ABA and ACC) and low temperature (4 °C). Subcellular localization analysis indicated that CpD27 is localized in the chloroplasts of Arabidopsis. Heterologous expression of CpD27 in Arabidopsis delayed bolting. The number of both rosette branches and cauline branches in transgenic plants was reduced compared with wild-type plants. In addition, the expression of AtBRC1 was significantly upregulated in transgenic lines, suggesting that CpD27 has a function similar to that of its homolog in Arabidopsis. Overall, these results indicate that CpD27 plays a conserved role in the SLs-mediated branching pathway, which regulates branch development in wintersweet. This study provides a molecular and theoretical basis for further understanding branch development in wintersweet. Full article

Introduction: The discharge of treated wastewater into coastal and marine environments represents a continuous source of pollutants, including pharmaceuticals and plastic additives with endocrine-disrupting (ED) potential. These compounds are of increasing concern for the European Union due to their capacity to interfere with hormonal systems and their inclusion in current environmental monitoring priorities. ED compounds may induce sublethal effects in aquatic organisms, particularly in vertebrates, where endocrine pathways are highly conserved. In this context, the use of Cyprinodon variegatus, a euryhaline fish species, provides a suitable model to assess potential risks in marine ecosystems. Despite advances in wastewater treatment technologies, the persistence of biologically active substances in treated effluents remains a concern. Objective: This study aims to evaluate whether treated effluent water still contains compounds with endocrine-disrupting activity and to assess their potential effects on marine organisms. Methodology: Larvae of C. variegatus from a laboratory stock maintained at ECIMAT (University of Vigo), one of the few available stocks of this species in Europe, were exposed for 48 h to environmentally relevant dilutions (1:10, 1:30, and 1:100) of wastewater treatment plant effluent collected after UV disinfection as the final treatment step. Pools of 10 larvae were used for each condition. Sublethal effects were assessed through gene expression analysis using quantitative PCR (qPCR), targeting biomarkers involved in endocrine regulation. Two housekeeping genes (tbp and hprt) were used for normalization. Estrogenic responses were evaluated through vtgab and zp2, while androgenic responses were assessed using 17hsd and 11hsd. Results: Preliminary results indicate significant alterations in estrogen-related gene expression, particularly in vitellogenin (vtgab) and zona pellucida (zp2), highlighting the activation of estrogenic pathways and supporting the presence of endocrine-disrupting activity in treated effluent water. Conclusions: This study highlights the relevance of assessing endocrine disrupting activity in treated effluents and supports the use of molecular biomarkers as sensitive tools for evaluating their potential impact on marine ecosystems, contributing to the improvement of wastewater monitoring and management strategies. Full article

Abiotic stresses, including drought, salinity, alkalinity, temperature extremes, flooding, heavy metals, and emerging pollutants, challenge plant growth and productivity by disturbing water relations, ion balance, redox homeostasis, membrane stability, energy metabolism, and developmental progression. Although substantial progress has been made in the identification of stress-responsive hormones, second messengers, kinases, transcription factors, transporters, and metabolic regulators, plant stress adaptation cannot be fully explained by linear signaling cascades or single tolerance genes. A major unresolved question is how early molecular events are reorganized into coordinated physiological and developmental outputs that support survival, recovery, and productivity. In this review, we propose an intermolecular interaction-driven adaptive remodeling framework for plant abiotic stress responses. This framework emphasizes that stress tolerance emerges from dynamic changes in receptor–ligand recognition, protein–protein interactions, calcium decoding, redox-sensitive modification, phosphorylation networks, transcriptional regulation, chromatin-associated control, and metabolite-mediated feedback. We further emphasize ROS as integrative redox switches that connect stress sensing, defense activation, senescence-related transitions, and recovery, and chromatin-associated mechanisms as regulators that may stabilize primed or memory-like adaptive states. We discuss how these interaction networks converge on core signaling hubs, including abscisic acid, reactive oxygen species, Ca²⁺, and kinase/phosphatase systems, and how they remodel stomatal behavior, root architecture, ion and pH homeostasis, redox buffering, metabolism, development, and reproductive resilience. We further highlight how natural variation, multi-omics, genome editing, high-throughput phenotyping, and field validation can translate interaction-centered stress biology into crop resilience. This perspective provides a conceptual bridge between molecular stress perception, network behavior, physiological adaptation, and climate-resilient agriculture. Full article

Background: Di19 (drought-induced 19)proteins belong to the C2H2-type zinc-finger family and play a crucial role in regulating plant growth, developmental processes, hormone signal transduction, and abiotic stress adaptation. However, research on the Di19 gene family in sweet potato and its diploid relatives remains relatively limited. Methods: At the whole-genome level, members of the Di19 gene family in sweet potato (Ipomoea batatas, 2n = 6x = 90) and its two diploid relatives, Ipomoea trifida (2n = 2x = 30) and Ipomoea triloba (2n = 2x = 30) were systematically identified, and multi-dimensional bioinformatics analyses were carried out. Results: Seven Di19 genes were identified per species, with the family’s overall evolutionary characteristics conserved. Some IbDi19s showed species-specific structural variations, mainly manifested as an increase in the number of exons, loss or substitution of conserved motifs. The expression patterns of Di19s of two diploid relatives are highly conserved. IbDi19s are mainly expressed in leaves and roots. Most members respond significantly to JA treatment, but hardly respond to IAA. The expression of IbDi19-1 was significantly up-regulated by 336-fold and 68-fold under GA3 and cold treatments, respectively. Based on bioinformatics and expression data, a hypothesis was proposed that IbDi19-1 may be involved in the regulation of low-temperature response and gibberellin signaling pathways. Conclusions: This study provides candidate genes and a theoretical basis for evolutionary analysis, stress-resistant molecular breeding of the Di19 gene family in sweet potato and its two diploid relatives. Full article

The Sugars Will Eventually be Exported Transporters (SWEET) family plays a crucial role in the carbohydrate distribution, phloem loading, and stress response of plants, yet the evolutionary characteristics and functional diversification of SWEET genes in the endangered timber species Phoebe bournei (Hemsl.) Yen C. Yang remain largely unexplored. In this study, 21 PbSWEET genes were identified and classified into four subfamilies (A-D). Subfamily A exhibited a unique lineage expansion, mainly driven by tandem and segmental duplications. The nonsynonymous-to-synonymous substitution ratio (Ka/Ks) values of all duplicate gene pairs were all less than 1, indicating a strong selective suppression effect; consistent with this evolutionary constraint, the majority of PbSWEET proteins harbor the conserved Medicago truncatula Nodulin 3/saliva (MtN3_slv) domain, with only a few exceptions lacking a complete version. Promoter and hormone response analyses revealed that under abscisic acid (ABA) stress, PbSWEET4 exhibited an immediate burst, whereas PbSWEET10 showed a delayed burst. Physiological data indicated that soluble sugars may be more dominant osmolytes than proline (Pro), a pattern that points to a potential carbon-centric regulatory strategy. PbSWEET4 showed an early burst before sugar/oxidative peaks, suggesting a possible non-canonical signaling role, whereas PbSWEET10 exhibited a late increase coinciding with sugar/malondialdehyde (MDA) peaks, suggesting potential involvement in sugar redistribution. Under methyl jasmonate (MeJA) treatment, PbSWEET10 was rapidly induced, yet sugar accumulation occurred only at 24 h, a temporal decoupling that suggests a possible transcription–metabolism decoupling. Collectively, these correlative patterns point to a possible dual-wave transcriptional mechanism and nominate PbSWEET10 as a candidate for stress response, though these inferences require functional validation. Full article

Background/Objectives: Stevia rebaudiosides represent a class of compounds extracted from the Stevia rebaudiana Bertoni plant or produced via yeast fermentation, which provide a sweet taste with little to no calories. These compounds are commercially referred to as stevia and are used in the food industry to reduce sugar in foods and beverages. Stevia is a non-nutritive sweetener (NNS), which is a class of ingredients which represent both artificial and plant-based sweeteners. NNSs are widely used and have been well studied. However, their effects on efficacy for weight management as a sugar reduction tool and overall metabolic effects are inconsistent. Of the approved NNSs for use, stevia is relatively new and one of the least studied. However, recent human clinical research has provided insights into stevia’s metabolic effects, effects on the gut microbiome and effects on weight management when used to replace sugar. The objective of this narrative review of human clinical studies is to provide an overview of the effects of stevia rebaudiosides (largely rebaudioside A) on glucoregulatory and cardiometabolic functions, as well as their effects on gut microbiome and weight management. These studies were typically short term (acute to three months) and heterogeneous by design, and they contained stevia rebaudiosides as lone sweeteners and as part of a binary blend with other NNSs. The majority of metabolic studies on stevia rebaudiosides have evaluated the effects on glucose homeostasis and, to a lesser extent, the effects on cardiometabolic function, the gut microbiome, and weight management. These studies suggest that stevia rebaudiosides have no statistically significant effects on glycemia, insulinemia, blood lipids, appetite hormones, or the gut microbiome. Limited studies suggest that, particularly when compared to sucrose, stevia produces very modest body weight and BMI changes, while studies on subjective appetite and food intake have had inconsistent results. Conclusions: longer-term studies are needed, with more consistent and rigorous design protocols across various populations. However, current human clinical studies suggest that stevia rebaudiosides have a limited impact on metabolic functions, and the observed effects on gut microbiome and changes in body weight, particularly when used to replace sugar, warrant further study. Full article

Ascophyllum nodosum extracts (ANE) are widely used biostimulants associated with improvements in plant growth, productivity, nutrient acquisition, and abiotic stress tolerance. However, the molecular mechanisms linking extract composition to plant signaling and physiological responses remain incompletely resolved. ANE contains a complex mixture of bioactive constituents, including polysaccharides, osmolytes, phenolic compounds, and phytohormone-like molecules. Their composition varies according to biomass source, environmental conditions, and extraction methodology, contributing to variability in biological activity. Current evidence suggests that ANE functions mainly as a signaling modulator rather than a direct nutrient source. ANE treatment has been associated with early cellular responses, including cytosolic Ca²⁺ influx, reactive oxygen species (ROS) generation, and mitogen-activated protein kinase (MAPK)-associated signaling events. However, many proposed mechanisms remain unresolved, and a considerable proportion of the available mechanistic evidence originates from studies using purified ANE-derived polysaccharides or related elicitor systems. ANE-associated responses include modulation of nutrient transport, primary metabolism, hormonal regulation, transcriptional reprogramming, and stress-responsive pathways, contributing to improved root development, nutrient acquisition, and defense-related responses. Nevertheless, limited knowledge of receptor-mediated perception mechanisms, signaling hierarchies, and extract-dependent variability continues to constrain mechanistic understanding and reproducibility. Future research should prioritize receptor identification, bioassay-guided fractionation, integrated multi-omics approaches, and improved standardization of extraction and formulation procedures. These advances will be essential for establishing robust mechanistic models and supporting the development of evidence-based ANE biostimulants for sustainable crop production. Full article

Plants must continuously balance the trade-offs between growth and defense, a constraint that is exacerbated by biotic and abiotic stresses, particularly when they occur together. Ethylene (ET) serves as a central, integrative regulatory node controlling this by linking developmental programs to stress-responsive signaling networks. Advances at the molecular and systems levels have revealed that ET mediates the redistribution of metabolic resources via coordinated regulation of its synthesis, perception, and downstream signaling. The ETR (Ethylene Receptor)-CTR1 (Constitutive Triple Response 1)-EIN2 (Ethylene Insensitive 2)-EIN3(Ethylene Insensitive 3) signaling module lies at the core of this network, integrating multiple hormonal pathways. Through dynamic crosstalk with jasmonic acid (JA), salicylic acid (SA), abscisic acid (ABA), auxin (AUX), and gibberellins (GA), ET enables the fine-tuned coordination of growth inhibition, immune activation, and stress acclimation in response to environmental fluctuations. Processes such as induced systemic resistance, programmed cell death, and architectural plasticity further reinforce this regulatory framework, with ethylene-responsive transcription factors, including ERFs (ethylene responsive factor gene family) and WRKYs, acting as critical convergence points. Emerging insights into ACC (1-aminocyclopropane-1-carboxylic acid) -dependent signaling, chromatin remodeling, and tissue-specific regulation expand the functional scope of ET beyond traditional hormone paradigms. At the same time, the ability of pathogens to manipulate ET signaling underscores its dual role in both promoting immunity and facilitating susceptibility. By integrating molecular, physiological, and ecological perspectives, this review highlights ET as a central coordinator of plant stress resilience and growth optimization, providing a unifying framework for understanding how plants adapt to complex and dynamic environments. Full article

Fragaria vesca is a highly adaptable diploid model species. Although bHLH transcription factors (TFs) have been widely reported to regulate plant development and stress responses, the bHLH gene family has not been systematically characterized in Fragaria vesca. In this study, we conducted a genome-wide analysis of the bHLH TF family based on the Fragaria vesca v6 genome assembly. A total of 117 FvbHLH genes were identified, and promoter analysis revealed the presence of numerous cis-regulatory elements associated with plant development, hormone signaling, and stress responses. Transcriptome analysis showed that several FvbHLH genes were differentially expressed in leaves and stems under low-temperature stress. The low-temperature expression patterns of selected genes were further validated by reverse transcription quantitative PCR (RT-qPCR). Moreover, heterologous overexpression of FvbHLH86 in Arabidopsis thaliana enhanced cold tolerance by improving reactive oxygen species (ROS) scavenging capacity. These findings provide a valuable foundation for future functional studies of FvbHLH genes and contribute to a better understanding of the molecular mechanisms underlying cold stress responses in Fragaria vesca. Full article

TEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR (TCP) are plant-specific regulators involved in growth, development, and responses to abiotic stresses, yet their roles in halophytes remain largely unexplored. In this study, we performed a genome-wide identification of TCP family members in the extreme halophyte Salicornia europaea, uncovering 15 non-redundant genes (SeurTCPs) classified into PCF, CIN, and CYC/TB1 subfamilies. Gene structure and conserved motif analyses revealed that SeurTCPs are largely intronless and maintain the canonical TCP domain, while showing subfamily-specific variations in motif composition and secondary/tertiary structures. Promoter analysis identified abundant stress and hormone-responsive cis-elements, particularly ABRE and STRE, suggesting potential involvement in salt stress signaling. Protein–protein interaction network prediction highlighted CIN and PCF members as hub nodes, indicating central roles in growth and stress response regulation. Quantitative Real-Time Reverse Transcription Polymerase Chain Reaction (qRT-PCR) analysis showed that most SeurTCP genes were responsive to salinity treatment, although the extent of transcriptional variation differed among subfamilies. Collectively, our results indicate that SeurTCPs balance conserved structural functions with subfamily-specific regulatory roles, contributing to S. europaea adaptation to extreme saline environments. This study provides valuable candidate genes for elucidating plant salt tolerance mechanisms and for potential crop improvement. Full article

Background: The NAC family constitutes one of the largest families of plant-specific transcription factors and plays crucial roles in fruit development, ripening, seed life, and stress responses. However, comprehensive characterization of NAC genes in Persea americana (avocado), an economically important horticultural crop, has been largely unexplored. Methods: We performed a genome-wide identification and systematic characterization of NAC transcription factor (TF) genes in P. americana using blastp analysis, phylogenetic reconstruction, expression profiling and weighted gene co-expression network analysis (WGCNA). Results: A total of 130 NAC genes (PaNACs) were identified and distributed across all 12 chromosomes. Phylogenetic analysis classified these PaNACs into eight distinct subfamilies. WGCNA identified 43 co-expression modules, with 68 PaNAC genes distributed across 24 modules associated with hormone signaling, cell wall modification, secondary metabolism, and fatty acid beta-oxidation. Among 48,785 developmental differentially expressed genes (DEGs), 70 PaNAC genes were differentially expressed, with PaNAC003 and PaNAC002 showing the strongest upregulation and PaNAC023 and PaNAC025 the strongest downregulation. Among 9488 ethylene-responsive DEGs, PaNAC041 was suppressed by ethylene and induced by 1-methylcyclopropene (1-MCP, a competitive inhibitor of ethylene perception), while PaNAC016, PaNAC085, and PaNAC086 showed the opposite pattern. Conclusions: These findings provide a genomic and transcriptional framework for future functional investigation of PaNAC genes and their potential relevance to avocado fruit development and postharvest ripening. Full article

Polyamine treatments are beneficial against various stress factors due to direct protective effects and the regulation of metabolite remodelling and gene expression. However, their protective, specific effects as priming under stress conditions remain not fully understood. We hypothesised that the positive effect of priming decreases even shortly after priming. To investigate the duration of action of putrescine treatment against osmotic stress, and to reveal species- and time-dependent differences, the effects of putrescine seed-soaking were monitored in wheat and maize during osmotic stress. The putrescine pre-treatment was effective in both species against osmotic stress during three trials ran in parallel, even when the stress was applied 7 days after seed-soaking. Leaves and roots responded differently, and putrescine induced certain unique changes under control and osmotic stress conditions. The effects of the treatments at the metabolite level changed between the sub-experiments and differed between the two species. Putrescine alone had an increasing effect on jasmonic acid-isoleucine level in the roots of both wheat and maize, and it induced the expression of WRKY97 in both the leaves and roots of maize plants throughout the experiment. These results highlight that different hormonal and transcriptional changes induced by putrescine were associated with the observed positive effects. Full article

Silver maple is a fast-growing, adaptable tree that often frequents wet places and thus can play an important ecological role in replanting schemes. For this, robust, high-quality seedlings are essential. In other tree species, improved seedling quality has been achieved by treating with a combination of humic substances (HSs) and bacterial strains capable of synthesizing auxin phytohormone; the benefit being attributed, without clear supporting evidence, to changes in phytohormone concentrations in the plant. To clarify the uncertainty, we conducted assays of hormones in silver maple seedlings treated with HSs and appropriate bacteria. We hypothesized that any positive additive effects between HSs and bacteria may be due to the ability of HSs to bind phytohormones. This hypothesis was tested and confirmed by using optical absorption spectra of auxins, humic acids, and their combination, as well as by modeling their interactions. The combination of humic substances and bacteria resulted in an approximately 1.5-fold increase in auxin content in roots, accompanied by a marked increase in root weight and length. We suggest this is likely the outcome of HSs binding to bacterial auxins and delivering them to plant roots. Concentrations of cytokinins and abscisic acid also changed under these treatments, which may help explain observed increases in photosynthesis and improved water balance. Full article

The floodplains of the Paraná and Paraguay rivers form the Chaco wetland, one of the most species-rich plant ecosystems in Argentina. Because wild grasses can serve as reservoirs of fungal species that cause disease and mycotoxin contamination of cereal crops, we examined asymptomatic, wild grasses from the Chaco wetlands for the presence of the genus Fusarium, which includes multiple species that cause agriculturally important diseases and/or mycotoxin contamination of crops. We focused our efforts on the identification and characterization of the multispecies lineage known as the Fusarium fujikuroi species complex (FFSC). Using morphological traits and partial DNA sequences of the TEF1 gene, we determined that 58 isolates recovered from the grasses were members of FFSC. Fifty of the isolates were identified as one of six FFSC species, including the economically important plant pathogenic species F. proliferatum, F. subglutinans, and F. verticillioides. To our knowledge, two of the species, F. anthophilum and F. pseudocircinatum, have not been reported previously in Argentina. Our analyses also indicated that eight of the FFSC isolates were a novel species, herein described as Fusarium varsavskyanum. A polymerase chain reaction (PCR) assay and genome sequence data indicate that each isolate of F. varsavskyanum isolate had only one mating type idiomorph (MAT1-1 or MAT1-2), which suggests that the fungus is heterothallic. Genome sequence analysis indicated that F. varsavskyanum has the genetic potential to produce, (i) the emerging mycotoxins fusaric acid and beauvericin (or enniatins); (ii) the pigments bikaverin, carotenoids, and fusarubin; and (iii) the plant hormones auxins, cytokinins, and gibberellins. Thus, asymptomatic grasses from the Chaco wetland can harbor Fusarium species that in some agroecosystems can cause economically important diseases and/or mycotoxin contamination of crops. It remains to be determined whether the genotypes of Fusarium species that occur on the wetland grasses, including F. varsavskyanum genotypes, can negatively impact agriculture. Full article

JAZ (Jasmonate ZIM-Domain) proteins are key negative regulators of the jasmonic acid (JA) signaling pathway and are involved in various plant growth, development, and stress regulation. However, the functions of the JAZ gene family in Camellia nitidissima remain poorly understood. Here, ten CnJAZ genes were identified at the genome-wide level, encoding 134–398 amino acids and unevenly distributed across eight chromosomes. All CnJAZs were predicted to localize to the nucleus. Based on phylogenetic and structural analyses, the ten CnJAZs were classified into five subfamilies, with members of the same subfamily sharing similar exon–intron structures. Collinearity analysis with Arabidopsis thaliana and Malus domestica suggests that the JAZ gene family shares a common ancestor. Promoter analysis revealed cis-acting elements responsive to light, methyl jasmonate (MeJA), and anaerobic stress. Transcriptome profiling showed that most CnJAZs exhibit tissue- and development-specific expression, particularly during flower development and organ formation. RT-qPCR confirmed that MeJA and gibberellin (GA₃) significantly induced the expression of CnJAZ, whereas ethylene (ETH) treatment up-regulated CnJAZ3 and CnJAZ5 by 80-fold after three hours. These findings highlight their important roles in growth, development, and hormonal regulation in C. nitidissima, laying a foundation for functional studies. Full article