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17 pages, 5699 KB  
Article
Data-Driven Material Selection for Flexible Wearable Sensors Under Environmental Coupling Conditions
by Yanping Lu, Myun Kim and Hanwen Zhang
Sensors 2026, 26(7), 2122; https://doi.org/10.3390/s26072122 (registering DOI) - 29 Mar 2026
Abstract
Flexible wearable electronics have shown strong potential for medical and health monitoring; however, conventional materials often fail to simultaneously satisfy the requirements of signal stability, wear comfort, and environmental adaptability under dynamic use conditions. To address this issue, this study proposes a data-driven [...] Read more.
Flexible wearable electronics have shown strong potential for medical and health monitoring; however, conventional materials often fail to simultaneously satisfy the requirements of signal stability, wear comfort, and environmental adaptability under dynamic use conditions. To address this issue, this study proposes a data-driven material selection framework for flexible wearable sensors based on the extreme gradient boosting (XGBoost) algorithm. The model integrates user perception, material physical parameters, and environmental coupling performance indicators to enable intelligent material matching and recommendation. Experimental results show that the proposed model achieves a recommendation accuracy of 94.5%, outperforming conventional comparison methods. Among the candidate materials, silver nanowires (AgNWs) exhibit superior overall performance, including a higher signal-to-noise ratio, lower skin-contact impedance, and stronger sweat resistance. In physiological monitoring experiments, the maximum deviation of the sensor response was below 3% under both static and motion conditions. In environmental coupling tests, the recommended material improved the system signal-to-noise ratio by 68% and reduced 24-h sensitivity decay by 75%. These results indicate that the proposed XGBoost-based framework can effectively support material selection for flexible wearable sensors and improve signal reliability and environmental adaptability in complex application scenarios. Full article
(This article belongs to the Special Issue Wearable Devices for Physical Activity and Healthcare Monitoring)
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19 pages, 1381 KB  
Systematic Review
Compost Amendments Enhance Crop Productivity and Yield for Sustainable Agriculture: A Global Meta-Analysis
by Muhammad Abdullah Aziz, Mosaed A. Majrashi and Arif Husain
Processes 2026, 14(7), 1102; https://doi.org/10.3390/pr14071102 (registering DOI) - 29 Mar 2026
Abstract
Compost application to soil is an effective strategy to enhance soil fertility, promote plant growth, and support sustainable agriculture. Nevertheless, the variability in the responses of plants to compost amendments across different compost types, concentrations, exposure durations, application media, and across different physiological [...] Read more.
Compost application to soil is an effective strategy to enhance soil fertility, promote plant growth, and support sustainable agriculture. Nevertheless, the variability in the responses of plants to compost amendments across different compost types, concentrations, exposure durations, application media, and across different physiological traits of plants is not well understood. In this study, we performed a meta-analysis using data from 92 peer-reviewed scientific articles to better understand the effect of compost amendments on plant physiological, biochemical, and yield traits. The results of this study showed that compost amendment significantly improved plant growth parameters, and the increase in shoot biomass and plant height was the highest (~19.4–42.7%), followed by root length (20.4%) and root biomass (19.7%), indicating the important role of compost in promoting root development. In addition, photosynthetic efficiency was significantly enhanced, and total chlorophyll and carotenoid content increased by 13.5–49.1%. The yield-related traits, total yield, and 100-grain weight responded positively and significantly increased by ~18%. There were variations among different plant species and different exposure conditions. The mechanistic interaction between compost components, soil agrochemical properties, and plant physiological and yield responses should be further explored to maximize the benefits of compost application in sustainable agriculture. Full article
(This article belongs to the Section Biological Processes and Systems)
20 pages, 1493 KB  
Review
Structure–Property–Function Relationships in Stimuli-Responsive Hydrogels for Brain Organoid Vascularization
by Minju Kim, Hoon Choi, Woo Sub Yang and Hyun Jung Koh
Gels 2026, 12(4), 287; https://doi.org/10.3390/gels12040287 (registering DOI) - 29 Mar 2026
Abstract
Human induced pluripotent stem cell (iPSC)-derived brain organoids have emerged as powerful three-dimensional (3D) platforms for modeling human neurodevelopment and neurological disorders. However, the absence of a functional vascular network remains a critical limitation, restricting oxygen and nutrient delivery, impairing metabolic stability, and [...] Read more.
Human induced pluripotent stem cell (iPSC)-derived brain organoids have emerged as powerful three-dimensional (3D) platforms for modeling human neurodevelopment and neurological disorders. However, the absence of a functional vascular network remains a critical limitation, restricting oxygen and nutrient delivery, impairing metabolic stability, and constraining long-term maturation. Conventional extracellular matrix (ECM) mimetics, such as Matrigel and other static synthetic hydrogels, provide biochemical support but fail to recapitulate the dynamic remodeling that characterizes the developing neurovascular niche. Recent advances in stimuli-responsive hydrogels offer spatiotemporal control over matrix stiffness, degradability, viscoelasticity, and biochemical cue presentation. In this review, we discuss dynamic hydrogel systems within a structure–property–function framework, highlighting how network chemistry and architecture may regulate endothelial sprouting, lumen formation, vascular stabilization, and neurovascular unit maturation in vascularized brain organoid models, based on evidence from both organoid studies and related biomaterial or vascular systems. Photoresponsive, enzyme-cleavable, thermo-responsive, supramolecular, bio-orthogonal click-based, and bioprinted platforms are discussed with emphasis on mechanotransduction, angiocrine signaling, and barrier specialization. Functional outcomes, including trans-endothelial electrical resistance, selective permeability, transporter expression, electrophysiological integration, and sustained perfusion, are discussed alongside translational challenges such as cytocompatibility, oxidative stress, scalability, and regulatory feasibility. Collectively, dynamic hydrogels provide a versatile biomaterial strategy for improving vascularization and aspects of functional maturation in brain organoid models with enhanced physiological relevance. Ultimately, stimuli-responsive hydrogel systems may serve as enabling platforms for engineering vascularized brain organoids and advancing human-relevant neurovascular disease modeling. Full article
(This article belongs to the Special Issue Advanced Functional Gels: Design, Properties, and Applications)
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11 pages, 1876 KB  
Communication
Methylene Blue-Enriched Feed Mitigates Acute Nitrite Intoxication in Nile tilapia (Oreochromis niloticus)
by Karoline M. Barbuio, Gustavo H. G. Pinto and Brunno S. Cerozi
Animals 2026, 16(7), 1042; https://doi.org/10.3390/ani16071042 (registering DOI) - 29 Mar 2026
Abstract
Intensive recirculating aquaculture systems are vulnerable to spikes of nitrite, which oxidizes hemoglobin to methemoglobin and compromises oxygen transport. Methylene blue (MB) is a classical antidote for methemoglobinemia, yet its use in fish has been limited to injections or immersion baths that are [...] Read more.
Intensive recirculating aquaculture systems are vulnerable to spikes of nitrite, which oxidizes hemoglobin to methemoglobin and compromises oxygen transport. Methylene blue (MB) is a classical antidote for methemoglobinemia, yet its use in fish has been limited to injections or immersion baths that are impractical for large-scale operations. This study assessed whether MB incorporated into a medicated feed could mitigate acute nitrite intoxication in Nile tilapia. Fish received either a control diet or 0.1% MB diet. After five days on the experimental diets, fish were exposed to nitrite for 48 h. Control fish experienced five deaths, whereas no mortality or behavioral distress was observed in MB-treated fish. Hematology indicated significantly lower circulating methemoglobin concentration in the MB group, while the control fish had higher hemoglobin concentration and erythrocyte counts, consistent with compensatory erythropoiesis. Gill histology revealed preserved lamellae with only mild changes in MB-fed fish, whereas control fish displayed lamellar aneurysm, edema, capillary congestion, fusion and epithelial hyperplasia. Therefore, oral MB administration appears to ameliorate the physiological consequences of acute nitrite exposure, offering a scalable intervention for emergency management of nitrite spikes. Future work should define dose–response relationships, evaluate post-exposure rescue, quantify gill lesions and assess MB residues in food fish. Full article
(This article belongs to the Special Issue Advances in Fish Toxicology and Pharmacology)
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17 pages, 18640 KB  
Article
Genome-Wide Evolutionary Analysis and Identification of SiMYB Genes Regulating Anthocyanin Accumulation Under Phosphorus-Deficient Conditions in Foxtail Millet
by Xiongwei Zhao, Jieru Zhang, Xiaoqi Wang, Jian Cui, Yixuan Liang, Mengqing Li and Yanhua Cao
Agronomy 2026, 16(7), 711; https://doi.org/10.3390/agronomy16070711 (registering DOI) - 29 Mar 2026
Abstract
Phosphorus (P) deficiency severely limits the growth and yield of crop plants, and anthocyanin accumulation is a key adaptive physiological response to low-P stress. However, the role of MYB transcription factors in regulating anthocyanin biosynthesis under P-deficient conditions and the application of favorable [...] Read more.
Phosphorus (P) deficiency severely limits the growth and yield of crop plants, and anthocyanin accumulation is a key adaptive physiological response to low-P stress. However, the role of MYB transcription factors in regulating anthocyanin biosynthesis under P-deficient conditions and the application of favorable haplotypes in foxtail millet low-P tolerance breeding remain unclear. Here, we performed genome-wide identification of SiMYB genes, elucidated their evolutionary characteristics, and identified key members regulating anthocyanin accumulation under P deficiency to provide genetic resources and a theoretical basis for foxtail millet molecular breeding aimed at improving nutrient use efficiency. Specifically, a total of 229 SiMYB genes were identified in the foxtail millet genome and classified into three subgroups, with the R2R3-MYB subfamily accounting for 59.8%. Phylogenetic and synteny analyses across 15 plant species revealed diverse divergence times and complex relationships, with 29 R2R3-MYB genes showing conserved collinearity with rice and maize orthologs. Association analysis using 196 foxtail millet accessions showed that 38 single nucleotide polymorphisms (SNPs) from 16 SiMYB genes were significantly associated with leaf anthocyanin content under P deficiency (p < 0.001). Notably, the SiMYB169 gene exhibited differential tissue expression and was highly upregulated in the leaves of a P-tolerant genotype after 24 h of P deficiency treatment. Furthermore, accessions carrying the favorable G allele of SiMYB169 showed significantly higher anthocyanin accumulation under P deficiency (p < 0.01). Network prediction analysis found that SiMYB169 interacted with key genes and multiple transcription factors in the biosynthesis pathway of anthocyanin. These findings highlight SiMYB169 as an evolutionarily conserved regulator that modulated anthocyanin biosynthesis under P-deficient conditions. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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15 pages, 794 KB  
Article
Endothelial Activation Phenotypes and Interleukin-6 Response After Therapeutic Plasma Exchange in Severe COVID-19-Associated Sepsis: A Retrospective Cohort Study
by Nicoleta Sgavardea, Ovidiu Bedreag, Greeshmasree Kambam, Tamara Mirela Porosnicu, Ciprian Gîndac, Claudiu Barsac, Cristian Oancea, Patricia Hogea, Alexandru Crisan and Voichita Elena Lazureanu
Diseases 2026, 14(4), 123; https://doi.org/10.3390/diseases14040123 (registering DOI) - 28 Mar 2026
Abstract
Background and Objectives: Severe COVID-19 frequently fulfills Sepsis-3 criteria and is characterized by thrombo-inflammation and endothelial injury. We evaluated whether a bedside endothelial activation index (EAI = D-dimer/fibrinogen) identifies biologically distinct phenotypes and relates to interleukin-6 (IL-6) response after therapeutic plasma exchange (TPE), [...] Read more.
Background and Objectives: Severe COVID-19 frequently fulfills Sepsis-3 criteria and is characterized by thrombo-inflammation and endothelial injury. We evaluated whether a bedside endothelial activation index (EAI = D-dimer/fibrinogen) identifies biologically distinct phenotypes and relates to interleukin-6 (IL-6) response after therapeutic plasma exchange (TPE), and whether baseline IL-6 predicts a ≥50% IL-6 reduction. Methods: Retrospective single-center ICU cohort of adults with SARS-CoV-2 infection, sepsis-related organ dysfunction, and ≥1 TPE session (n = 51). Patients were stratified by median EAI (low vs. high). Outcomes included peri-procedural biomarker/physiology changes (post–baseline), IL-6 responder status (≥50% reduction), correlations with IL-6 reduction (%), and multivariable predictors of response. Results: Compared with low EAI (n = 25), high EAI (n = 26) had higher baseline D-dimer (6.2 vs. 2.2 µg/mL) and lower fibrinogen (2.9 vs. 7.1 g/L) (both p < 0.001). Low EAI showed larger CRP decreases (ΔCRP −84.0 vs. −2.3 mg/L; p = 0.001) and larger fibrinogen falls (Δ −3.1 vs. −0.4 g/L; p < 0.001), while high EAI had larger D-dimer decreases (Δ −2.5 vs. −0.6 µg/mL; p = 0.004) and a modest SOFA improvement (Δ −0.3 vs. +0.1; p = 0.026). IL-6 responders (n = 20) had higher baseline IL-6 than non-responders (365.2 vs. 47.1 pg/mL; p < 0.001). Baseline IL-6 independently predicted response (per doubling: OR 1.94, 95% CI 1.27–2.95; p = 0.002), while age reduced odds (OR 0.91/year, 95% CI 0.84–0.99; p = 0.032). IL-6 reduction correlated with ΔCRP (ρ = −0.41; p = 0.003) and ΔPaO2/FiO2 (ρ = 0.37; p = 0.01). Conclusions: EAI stratifies distinct thrombo-inflammatory patterns around TPE, while baseline IL-6 is the dominant predictor of achieving large IL-6 reductions. To emphasize the novelty and clarify the study objective, this exploratory analysis used a phenotype-stratified framework to test whether a simple bedside endothelial activation index could enrich biological response assessment to adjunctive TPE. The prespecified primary outcome was achievement of a ≥50% IL-6 reduction after completion of the TPE course; secondary outcomes included peri-procedural biomarker, oxygenation, SOFA, and ICU endpoints. Full article
27 pages, 666 KB  
Systematic Review
Efficacy and Safety of Vagus Nerve Stimulation for Hospitalized COVID-19 Patients: A Systematic Review and Methodological Evaluation of Randomized Controlled Trials
by Adrian Balan, Giles Graham, Herban Sorin, Marius Marcu, Nini Gheorghe, Mara Gabriela, Andreea-Roxana Florescu, Alina-Mirela Popa, Ana Lascu, Cristian Ion Mot, Stefan Mihaicuta and Stefan Marian Frent
Medicina 2026, 62(4), 649; https://doi.org/10.3390/medicina62040649 (registering DOI) - 28 Mar 2026
Abstract
Background and Objectives: Coronavirus disease 2019 (COVID-19) is characterized by excessive inflammatory responses, including the so-called cytokine storm, which contributes substantially to morbidity and mortality in hospitalized patients. The vagus nerve, through the cholinergic anti-inflammatory pathway, represents a theoretically attractive therapeutic target [...] Read more.
Background and Objectives: Coronavirus disease 2019 (COVID-19) is characterized by excessive inflammatory responses, including the so-called cytokine storm, which contributes substantially to morbidity and mortality in hospitalized patients. The vagus nerve, through the cholinergic anti-inflammatory pathway, represents a theoretically attractive therapeutic target for modulating systemic inflammation. Vagus nerve stimulation (VNS) has emerged as a potential adjunctive treatment for COVID-19, with several randomized controlled trials (RCTs) investigating its efficacy on inflammatory biomarkers and clinical outcomes. The quality of this evidence base has not been rigorously evaluated. This systematic review critically appraises all available RCT evidence for VNS in hospitalized COVID-19 patients. Materials and Methods: We systematically searched PubMed, Scopus, Cochrane (CENTRAL), and Web of Science from database inception to January 2026, for RCTs evaluating any form of VNS (invasive, non-invasive, cervical, or auricular) in hospitalized patients with confirmed acute COVID-19. Two reviewers independently screened titles, abstracts, and full texts according to pre-specified eligibility criteria. Risk of bias was assessed using the Cochrane Risk of Bias 2 (RoB 2) tool, with assessments initially performed using multiple artificial intelligence tools and subsequently validated by the authors in accordance with PRISMA 2020 guidelines. Given substantial heterogeneity and high risk of bias, narrative synthesis was performed rather than meta-analysis. Also, GRADE assessment was performed. Results: From 437 records identified, six RCTs comprising 221 patients met the inclusion criteria. Five trials (83%) were rated as high risk of bias, primarily due to inadequate blinding, substantial baseline imbalances, significant missing data and extensive multiple testing without statistical correction. The single double-blind trial with a credible sham control (Rangon et al.) found null results across all outcomes, including clinical progression, ICU transfer, and mortality, while the five “high” risk-of-bias trials generally reported positive findings on various inflammatory markers and clinical outcomes. One trial (Corrêa et al.) measured heart rate variability as a direct indicator of vagal activation and found no change despite claiming anti-inflammatory effects, contradicting the proposed mechanism of action. Significant cognitive findings from an interim analysis (Uehara et al., n = 21) disappeared in the larger completed trial (Corrêa et al., n = 52), providing empirical demonstration of false positive findings in small, underpowered studies. Conclusions: Currently available evidence supporting the use of VNS for acute COVID-19 remains scarce; however, the physiological rationale remains sound, although the absence of reliable target engagement markers in the included studies limits confidence in this treatment method. Large-scale, double-blind, sham-controlled trials are required before VNS can be firmly recommended for COVID-19 management. Full article
(This article belongs to the Section Epidemiology & Public Health)
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28 pages, 12204 KB  
Article
GWAS and Regularised Regression Identify SNPs Associated with Candidate Genes for Stage-Specific Salinity Tolerance in Rice
by Sampathkumar Renukadevi Sruthi, Zishan Ahmad, Anket Sharma, Venkatesan Lokesh, Natarajan Laleeth Kumar, Arulkumar Rinitta Pearlin, Ramanathan Janani, Yesudhas Anbu Selvam and Muthusamy Ramakrishnan
Plants 2026, 15(7), 1046; https://doi.org/10.3390/plants15071046 (registering DOI) - 28 Mar 2026
Abstract
Soil salinity remains a major constraint to rice productivity, particularly during early developmental stages when plants are highly sensitive to osmotic and ionic stress. In this study, we evaluated 201 genetically diverse rice genotypes from the 3K Rice Diversity Panel to investigate stage-specific [...] Read more.
Soil salinity remains a major constraint to rice productivity, particularly during early developmental stages when plants are highly sensitive to osmotic and ionic stress. In this study, we evaluated 201 genetically diverse rice genotypes from the 3K Rice Diversity Panel to investigate stage-specific mechanisms of salinity tolerance and develop machine learning-based predictive models for rapid phenotypic screening. Morphological and physiological traits were measured under control and saline conditions at germination and early seedling stages to derive Stress Tolerance Indices (STIs). The average membership function value (AMFV), calculated from multi-trait STI profiles, effectively captured variation in salinity responses and enabled classification of genotypes into five tolerance categories. Genome-wide association analysis using high-density SNP markers identified 36 significant marker–trait associations, including potentially novel SNPs on chromosomes 1 and 12. Several loci co-localized with candidate genes (LTR1, LGF1, OsCPS4, OsNCX7, and OsNHX4), while functional SNPs within genes (OsDRP2C, RLCK168, and OsMed37_2) and non-synonymous variants (qSVII11.1 and qSNaK3.1) further supported their candidacy in salinity tolerance. Mining favourable SNPs of causal genes identified superior multilocus combinations consistent with STI-based phenotypic patterns, with genotype 91-382 emerging as the strongest performer, exhibiting enhanced Na+ exclusion, K+ retention, and biomass resilience across developmental stages. To address multicollinearity among STI traits, we applied cross-validated LASSO (germination) and Elastic Net (early seedling) models, achieving high predictive accuracy and revealing a developmental shift from biomass-driven tolerance at germination to ion-regulatory processes at the seedling stage. Independent validation showed strong agreement between predicted and observed AMFVs. By integrating physiological indices, GWAS-derived SNP signals, and regularized machine learning approaches, this study provides a robust framework for identifying elite donors and accelerating breeding for salt-tolerant rice. Full article
(This article belongs to the Special Issue Stress-Tolerant Crops for Future Agriculture)
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22 pages, 14705 KB  
Article
The NKp44-1 Isoform Is an Activating Receptor for PDGF-DD Expressed on Natural Killer Cells
by Alexander J. Sedgwick, Md Abdullah Al Kamran Khan, Stephanie Thuy Duong Pham, Melissa A. Edeling, Alexandra J. Corbett, Julian P. Vivian, Yaseelan Palarasah and Alexander D. Barrow
Cancers 2026, 18(7), 1099; https://doi.org/10.3390/cancers18071099 (registering DOI) - 28 Mar 2026
Abstract
Background/Objectives: Natural killer (NK) cells are key innate lymphoid cells that restrict tumour progression by secreting proinflammatory cytokines and directly lysing malignant cells, with their activity tightly regulated by a balance of activating and inhibitory surface receptors. The natural cytotoxicity receptor NKp44 is [...] Read more.
Background/Objectives: Natural killer (NK) cells are key innate lymphoid cells that restrict tumour progression by secreting proinflammatory cytokines and directly lysing malignant cells, with their activity tightly regulated by a balance of activating and inhibitory surface receptors. The natural cytotoxicity receptor NKp44 is induced on NK cells following stimulation with IL-2 or IL-15 and recognizes platelet-derived growth factor D (PDGF-DD) as a ligand. Mechanistic interpretation of NKp44 signalling upon PDGF-DD engagement is confounded by the existence of three distinct NKp44 isoforms (NKp44-1, -2, and -3), each capable of initiating divergent intracellular signalling cascades. Unlike NKp44-2 and -3, NKp44-1 encodes a cytoplasmic tyrosine residue (Y238) that conforms to a putative immunoreceptor tyrosine-based inhibition motif (ITIM) and has been reported to suppress NK cell effector functions in some contexts. However, it remains unclear whether the NKp44 isoforms are translated and expressed in NK cells, and formal evidence defining NKp44-1 signalling in response to engagement by PDGF-DD is lacking. Methods: In this study, we used C-terminal targeting monoclonal antibodies (mAbs) and a NFAT-GFP reporter system to define the expression and signalling properties of NKp44 isoforms in response to PDGF-DD. Results: We demonstrate protein expression of NKp44-1 and NKp44-2-/3 receptors in IL-2 expanded NK cells. We further show that NKp44-1 transduces activating rather than inhibitory signals when engaged by PDGF-DD ligand, albeit weaker than NKp44-3. Intriguingly, we find that Y238 is dispensable for NKp44-1 activating signalling and instead functions as a YXXΦ internalisation motif. Conclusions: Collectively, these findings provide the first evidence that the NKp44-1 and NKp44-2/3 isoforms are expressed in NK cells and establish that PDGF-DD activates signalling through NKp44-1 independently of Y238. This work lays the foundations for future studies investigating how PDGF-DD sensing by the different NKp44 isoforms shapes immune functions in different physiological and pathological contexts. Full article
(This article belongs to the Section Cancer Immunology and Immunotherapy)
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15 pages, 2718 KB  
Article
Genomic Analysis of the Trehalose-6-Phosphate Synthase Family Involved in Trehalose Biosynthesis and Drought Response in Morus alba
by Mengting Li, Hui Gan, Xie Wang, Jiyang Wang, Leixin Deng, Hangcheng Hu, Sitong Qiao, Meng Tang, Shujie Tang, Haoran Jin, Duwei Xia and Anqi Ding
Curr. Issues Mol. Biol. 2026, 48(4), 356; https://doi.org/10.3390/cimb48040356 (registering DOI) - 28 Mar 2026
Abstract
Drought stress severely limits the growth and productivity of Morus alba, yet the molecular mechanisms underlying its adaptation remain poorly understood. Trehalose, an important osmoprotectant and signaling molecule, plays a key role in plant responses to abiotic stress, and its biosynthesis is [...] Read more.
Drought stress severely limits the growth and productivity of Morus alba, yet the molecular mechanisms underlying its adaptation remain poorly understood. Trehalose, an important osmoprotectant and signaling molecule, plays a key role in plant responses to abiotic stress, and its biosynthesis is primarily regulated by trehalose-6-phosphate synthase (TPS). However, the characteristics and potential functions of TPS genes in M. alba have not been systematically investigated. In this study, we identified 11 TPS genes (MaTPSs) in the M. alba genome and performed comprehensive analyses, including phylogenetic relationships, gene structures, conserved motifs, cis-regulatory elements, and expression profiles. Phylogenetic analysis classified MaTPSs into TPS I and TPS II subfamilies, with closer evolutionary relationships to Populus trichocarpa than to Arabidopsis thaliana. Promoter analysis revealed the presence of multiple stress- and hormone-responsive elements, suggesting their potential involvement in abiotic stress regulation. Physiological measurements showed that drought stress significantly increased trehalose accumulation, with a 1.6-fold increase in leaves and a 2.2-fold increase in roots. Expression profiling further demonstrated that six MaTPS genes were upregulated under drought stress, among which MaTPS4, MaTPS9, MaTPS10, and MaTPS11 exhibited significant induction (approximately 5-, 5-, 8-, and 10-fold, respectively). Correlation analysis further indicated that trehalose accumulation was positively associated with all upregulated MaTPS genes (p < 0.05). Taken together, these results suggest that MaTPS genes may be involved in drought-responsive regulation of trehalose metabolism in M. alba. This study provides a valuable foundation for future functional validation and the genetic improvement of drought tolerance in mulberry. Full article
(This article belongs to the Section Molecular Plant Sciences)
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23 pages, 1074 KB  
Review
The Role of the SOS Response in the Adaptation of Pseudomonas aeruginosa
by Emilia Zarembska, Anna Pietruczuk-Padzik and Małgorzata Wrzosek
Curr. Issues Mol. Biol. 2026, 48(4), 355; https://doi.org/10.3390/cimb48040355 (registering DOI) - 28 Mar 2026
Abstract
Pseudomonas aeruginosa is a major opportunistic pathogen whose adaptive capacity limits the long-term efficacy of antibiotic therapy. Beyond classical resistance mechanisms, antibiotics may also act as stress signals that alter bacterial physiology and evolutionary trajectories. A central element of this response is the [...] Read more.
Pseudomonas aeruginosa is a major opportunistic pathogen whose adaptive capacity limits the long-term efficacy of antibiotic therapy. Beyond classical resistance mechanisms, antibiotics may also act as stress signals that alter bacterial physiology and evolutionary trajectories. A central element of this response is the SOS regulatory network, controlled by the RecA–LexA system. Although well studied in Escherichia coli, SOS signaling in P. aeruginosa shows distinct regulatory features that remain incompletely understood. This review summarizes experimental and clinical evidence on antibiotic-induced SOS responses in P. aeruginosa, focusing on fluoroquinolones and other genotoxic agents. Fluoroquinolone exposure consistently induces SOS activation and RecA-dependent signaling, affecting short-term antibiotic susceptibility. However, the available evidence does not support a universal role for SOS activation as a major driver of long-term resistance evolution under most tested conditions. Its relationship with antibiotic-induced mutagenesis remains variable: some studies implicate low-fidelity DNA polymerases, whereas others report mutagenesis independent of canonical RecA–LexA control. Beyond mutagenesis, SOS activation may affect integron dynamics, virulence, and biofilm-associated phenotypes. Overall, in P. aeruginosa, the SOS response appears to be a context-dependent modulator of stress adaptation rather than a universal determinant of resistance evolution. Full article
(This article belongs to the Collection Feature Papers Collection in Molecular Microbiology)
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27 pages, 1598 KB  
Review
Molecular and Cellular Mechanisms of Plant Responses to Heavy Metal Stress in Mining-Impacted Environments
by Mădălina F. Ioniță, Emilia C. Dunca and Sorin M. Radu
Plants 2026, 15(7), 1045; https://doi.org/10.3390/plants15071045 (registering DOI) - 28 Mar 2026
Abstract
Heavy metal contamination associated with mining activities is a major source of abiotic stress for plants, strongly affecting plant physiology, growth and survival in contaminated environments. Due to their non-biodegradable nature and long-term bioavailability, heavy metals persist in soils affected by mining activities, [...] Read more.
Heavy metal contamination associated with mining activities is a major source of abiotic stress for plants, strongly affecting plant physiology, growth and survival in contaminated environments. Due to their non-biodegradable nature and long-term bioavailability, heavy metals persist in soils affected by mining activities, exposing plants to chronic stress conditions that require the activation of coordinated cellular and molecular response mechanisms to limit toxicity and maintain internal homeostasis. This review synthesises and critically analyses current knowledge on the molecular and cellular mechanisms governing plant responses to heavy metal stress in mining-affected environments. Key processes involved in metal uptake and transport, redox imbalance and oxidative stress generation, antioxidant defence systems, and molecular detoxification mechanisms, including metal chelation, subcellular compartmentalisation, and gene expression regulation, are discussed. Particular attention is paid to cellular signalling pathways that mediate plant adaptation to prolonged exposure to complex metal mixtures. Emphasis is placed on integrating molecular-level knowledge with the specific context of mining sites, highlighting the limitations of extrapolating results obtained under controlled experimental conditions to naturally contaminated environments. This perspective integrates molecular mechanisms with the geochemical realities of mining sites, providing a solid basis for the development of effective phytoremediation strategies and the optimisation of plant species selection. Full article
(This article belongs to the Section Plant Response to Abiotic Stress and Climate Change)
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33 pages, 3023 KB  
Article
Molecular Mechanisms of Drought Stress Response in Medicago ruthenica: Insights from Transcriptome Analysis and Functional Validation of Key Genes
by Yingtong Mu, Kefan Cao, Jingshi Lu, Yutong Zhang and Fengling Shi
Agronomy 2026, 16(7), 707; https://doi.org/10.3390/agronomy16070707 - 27 Mar 2026
Abstract
Drought stress severely limits plant growth and productivity, yet the molecular basis of drought tolerance and post-drought recovery remains incompletely understood in many forage legumes. Medicago ruthenica is a perennial legume native to arid and cold regions and exhibits strong drought resilience. Results: [...] Read more.
Drought stress severely limits plant growth and productivity, yet the molecular basis of drought tolerance and post-drought recovery remains incompletely understood in many forage legumes. Medicago ruthenica is a perennial legume native to arid and cold regions and exhibits strong drought resilience. Results: We integrated key physiological traits related to stomatal regulation, photosynthesis, osmotic adjustment and antioxidant defense with RNA-seq across four stages (well-watered control, CK; drought for 9 days, D9; drought for 12 days, D12; and rewatering for 4 days, RW). Drought triggered stage-dependent physiological shifts, and transcriptome profiling identified >3000 drought- and rewatering-responsive genes enriched in primary metabolism, redox homeostasis and hormone signaling. WGCNA highlighted two drought-associated modules (MEcyan and MEcoral1) and prioritized three hub transcription factors for functional validation: 861 (AP2/ERF), 22 (WRKY) and 89 (bZIP). Overexpression of each gene in tobacco improved drought tolerance, as indicated by enhanced growth/root traits, increased osmolyte accumulation and antioxidant enzyme activities, and reduced membrane damage. Conclusions: Together, these results provide an integrated view of drought stress response and recovery in M. ruthenica and identify 861, 22 and 89 as candidate regulatory genes for engineering drought resilience in legumes. Full article
23 pages, 2239 KB  
Article
2R,3R-trans-Dihydroquercetin Has Powerful Antioxidant Properties, Prevents DNA and Protein Damage, and Protects Mice from Injury Caused by Radiation-Induced Oxidative Stress
by Olga Shelkovskaia, Anatoly V. Chernikov, Dmitriy A. Serov, Dmitriy E. Burmistrov, Yuri A. Trutnev, Ruslan M. Sarimov, Alexander V. Simakin, Eugeny M. Konchekov, Serazhutdin A. Abdullaev, Ekaterina E. Karmanova, Mars G. Sharapov and Sergey V. Gudkov
Antioxidants 2026, 15(4), 423; https://doi.org/10.3390/antiox15040423 - 27 Mar 2026
Abstract
(1) Background: The search for new polymodal antioxidants to correct oxidative stress of various origins and its consequences remains one of the most pressing and rapidly developing areas of biomedical research. (2) Methods: Hydrogen peroxide and hydroxyl radical detection, induced luminescence assay, ELISA [...] Read more.
(1) Background: The search for new polymodal antioxidants to correct oxidative stress of various origins and its consequences remains one of the most pressing and rapidly developing areas of biomedical research. (2) Methods: Hydrogen peroxide and hydroxyl radical detection, induced luminescence assay, ELISA for 8-oxoguanine detection, animal survival, blood cell count, micronucleus test, and PCR were used. (3) Results: 2R,3R-trans-dihydroquercetin (DHQ) was shown to reduce the amount of hydrogen peroxide and hydroxyl radicals formed during water radiolysis, leading to reduced damage to biomolecules. DHQ is a radioprotector, most effective at a dose of 300 mg/kg administered 15 min before radiation exposure. The dose reduction factor is 1.22. DHQ administration reduces the severity of radiation-induced leukopenia and thrombopenia by protecting red bone marrow cells. The mechanism of DHQ’s radioprotective action is fundamentally different from that of classical stress response inducers and is based on the normalization of the target cell transcriptional profile, rather than its hyperstimulation. (4) Conclusions: DHQ’s ability to restore the expression of antioxidant defense, DNA repair, and apoptotic genes to physiological levels under radiation exposure allows it to be considered a promising pharmacological agent for the correction of radiation-induced damage to normal tissues. Full article
(This article belongs to the Special Issue Radioprotective Effects of Antioxidants)
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32 pages, 1669 KB  
Review
Adaptation Mechanisms of Aquatic Animals to Saline–Alkaline Water Aquaculture: Physiological, Energetic and Molecular Perspectives
by Yingsha Qu, Huichen Li, Bo Zhang, Hongwu Cui, Jianlei Chen, Yong Xu, Zhengguo Cui, Keming Qu and Hao Li
Fishes 2026, 11(4), 202; https://doi.org/10.3390/fishes11040202 - 27 Mar 2026
Abstract
Saline–alkaline water constitutes a vital strategic non-traditional fishery resource in China, characterized by high pH values, elevated carbonate alkalinity, and complex ionic compositions. These extreme environmental conditions impose significant stress on aquatic animals, mainly by inducing ionic toxicity and disrupting acid–base regulatory mechanisms. [...] Read more.
Saline–alkaline water constitutes a vital strategic non-traditional fishery resource in China, characterized by high pH values, elevated carbonate alkalinity, and complex ionic compositions. These extreme environmental conditions impose significant stress on aquatic animals, mainly by inducing ionic toxicity and disrupting acid–base regulatory mechanisms. Such disruptions subsequently lead to osmotic imbalance, metabolic dysregulation, and immunosuppression, thus restricting the survival and growth of aquatic species in aquaculture systems. Consequently, the sustainable development of the saline–alkaline aquaculture is imperative for enhancing production efficiency and promoting the utilization of marginal land and water resources. This review comprehensively summarizes the current status of saline–alkaline aquaculture and highlights the stress-inducing impacts of salinity, alkalinity, and specific ionic ratios on teleost fishes and crustaceans. It further explores key adaptive mechanisms, including osmoregulatory and ionoregulatory strategies, bioenergetic trade-offs related to oxygen consumption and ammonia excretion, coordinated antioxidant and innate immune responses, as well as recent findings from multi-omics research. This review aims to offer a scientific foundation for the selection and breeding of saline–alkaline-tolerant strains, the precise regulation of aquaculture water environments, and the development of ecological aquaculture models in saline–alkaline regions, thereby facilitating the sustainable utilization of saline–alkaline land and water resources. Full article
(This article belongs to the Special Issue Influences of Environmental Change on Fishes and Fisheries)
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