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19 pages, 6085 KB  
Article
Study on Sustainable Sludge Utilization via the Combination of Electroosmotic Vacuum Preloading and Polyacrylamide Flocculation
by Heng Zhang, Chongzhi Tu and Cheng He
Sustainability 2025, 17(21), 9802; https://doi.org/10.3390/su17219802 (registering DOI) - 3 Nov 2025
Abstract
Dredged sludge is characterized by a high water content, low permeability, and poor load-bearing capacity, which hinder its sustainable utilization as an engineering filler. During the stabilization process using vacuum preloading (VP), fine-grained sludge readily clogs drainage channels, thereby prolonging consolidation duration and [...] Read more.
Dredged sludge is characterized by a high water content, low permeability, and poor load-bearing capacity, which hinder its sustainable utilization as an engineering filler. During the stabilization process using vacuum preloading (VP), fine-grained sludge readily clogs drainage channels, thereby prolonging consolidation duration and compromising drainage efficiency. To address these persistent challenges, this study proposes an improved method that combines electroosmosis, VP, and polyacrylamide (PAM) to enhance the consolidation performance of dredged sludge. Column settling experiments demonstrated that the optimal application dosages of anionic polyacrylamide (APAM) and calcium chloride (CaCl2) were 0.25% and 4.0% of dry sludge mass, respectively. Excessive dosage of either APAM or CaCl2 disturbed the agglomeration and sedimentation of fine-grained particles due to surface charge inversion. Electroosmotic VP (EVP) facilitated the directional movement of pore water, which increased the cumulative water discharge mass by 37.3%. The combination of APAM and CaCl2 enhanced particle flocculation via adsorption and bridging effects, significantly improving soil permeability and dewatering performance. Driven by an electric field, Ca2+ ions transported water molecules toward the cathode. Subsequently, these Ca2+ ions participated in reactions to generate cementitious agents. Compared with VP, this integrated method increased the sludge shear strength by 108.1% and produced a much denser microstructure. Full article
(This article belongs to the Special Issue Soil Stabilization and Geotechnical Engineering Sustainability)
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49 pages, 15481 KB  
Article
Geomechanical Integrity of Offshore Oil Reservoir During EOR-CO2 Process: A Case Study
by Piotr Ruciński
Energies 2025, 18(21), 5751; https://doi.org/10.3390/en18215751 - 31 Oct 2025
Viewed by 50
Abstract
The aim of this work was to investigate the evolution of the mechanical integrity of the selected offshore oil reservoir during its life cycle. The geomechanical stability of the reservoir formation, including the caprock and base rock, was investigated from the exploitation phase [...] Read more.
The aim of this work was to investigate the evolution of the mechanical integrity of the selected offshore oil reservoir during its life cycle. The geomechanical stability of the reservoir formation, including the caprock and base rock, was investigated from the exploitation phase through waterflooding production to the final phase of enhanced oil recovery (EOR) with CO2 injection. In this study, non-isothermal flow simulations were performed during the process of cold water and CO2 injection into the oil reservoir as part of the secondary EOR method. The analysis of in situ stress was performed to improve quality of the geomechanical model. The continuous changes in elastic and thermal properties were taken into account. The stress–strain tensor was calculated to efficiently describe and analyze the geomechanical phenomena occurring in the reservoir as well as in the caprock and base rock. The integrity of the reservoir formation was then analyzed in detail with regard to potential reactivation or failure associated with plastic deformation. The consideration of poroelastic and thermoelastic effects made it possible to verify the development method of the selected oil reservoir with regard to water and CO2 injection. The numerical method that was applied to describe the evolution of an offshore oil reservoir in the context of evaluating the geomechanical state has demonstrated its usefulness and effectiveness. Thermally induced stresses have been found to play a dominant role over poroelastic stresses in securing the geomechanical stability of the reservoir and the caprock during oil recovery enhanced by water and CO2 injection. It was found that the injection of cold water or CO2 in a supercritical state mostly affected horizontal stress components, and the change in vertical stress was negligible. The transition from the initial strike-slip regime to the normal faulting due to formation cooling was closely related to the observed failure zones in hybrid and tensile modes. It has been estimated that changes in the geomechanical state of the oil reservoir can increase the formation permeability by sixteen times (fracture reactivation) to as much as thirty-five times (tensile failure). Despite these events, the integrity of the overburden was maintained in the simulations, demonstrating the safety of enhanced oil recovery with CO2 injection (EOR-CO2) in the selected offshore oil reservoir. Full article
(This article belongs to the Special Issue Advanced Solutions for Carbon Capture, Storage, and Utilization)
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28 pages, 2462 KB  
Article
Polymer Flooding in Space-Constrained Reservoirs: Technical and Economic Assessment of Liquid vs. Powder Polymers
by Muhammad Tahir, Rafael E. Hincapie, Dominic Marx, Dominik Steineder, Amir Farzaneh, Torsten Clemens, Nikola Baric, Elham Ghodsi and Riyaz Kharrat
Polymers 2025, 17(21), 2927; https://doi.org/10.3390/polym17212927 - 31 Oct 2025
Viewed by 85
Abstract
This study evaluates the technical and economic feasibility of liquid polymer emulsions as substitutes for powder polymers in polymer flooding applications, particularly in space-constrained, low-permeability reservoirs in Austria. Rheological tests determined that target viscosities of 20 mPa·s at 20 °C and a shear [...] Read more.
This study evaluates the technical and economic feasibility of liquid polymer emulsions as substitutes for powder polymers in polymer flooding applications, particularly in space-constrained, low-permeability reservoirs in Austria. Rheological tests determined that target viscosities of 20 mPa·s at 20 °C and a shear rate of 7.94 s−1 were achieved using concentrations of 1200 ppm for liquid polymer 1 (LP1), 2250 ppm for liquid polymer 2 (LP2), and 1200–1400 ppm for powder polymers. Injectivity tests revealed that liquid polymers encountered challenges in 60 mD and 300 mD core plugs, with pressure stabilization not achieved at injection rates of 1–2.5 ft/day. Powder polymers demonstrated stable injectivity, with powder polymer 1 (PP1) showing an optimal performance at 10 ft/day and a low residual resistance factor (RRF). Two-phase core floods using PP1 and powder polymer 2 (PP2) at 1 ft/day yielded incremental oil recovery factors of approximately 5%, with a maximum of 8% observed for higher viscosity slugs. Economic analysis indicated that over a 3-year horizon, liquid polymers are 30% cheaper than powder polymer Option 1 but 100% more expensive than Option 2. Over a 10-year horizon, liquid polymers are 50% more expensive than both powder polymer options. Although liquid polymers offer logistical advantages, they are unsuitable for low-permeability reservoirs. Powdered polymers, particularly PP1, are recommended for pilot implementation due to superior injectivity, mechanical stability, and recovery performance. Full article
26 pages, 8714 KB  
Article
Mechanism of Burial Depth Effect on Recovery Under Different Coupling Models: Response and Simplification
by Zhanglei Fan, Gangwei Fan, Dongsheng Zhang, Tao Luo, Xuesen Han, Guangzheng Xu and Haochen Tong
Appl. Sci. 2025, 15(21), 11657; https://doi.org/10.3390/app152111657 - 31 Oct 2025
Viewed by 42
Abstract
Coalbed methane (CBM) development involves multiple interacting physical fields, and different coupling schemes can lead to distinctly different production behaviors. A thermo-hydro-mechanical model accounting for gas–water two-phase flow and matrix dynamic diffusion (TP-D-THM) is developed and validated, achieving an error rate below 10%. [...] Read more.
Coalbed methane (CBM) development involves multiple interacting physical fields, and different coupling schemes can lead to distinctly different production behaviors. A thermo-hydro-mechanical model accounting for gas–water two-phase flow and matrix dynamic diffusion (TP-D-THM) is developed and validated, achieving an error rate below 10%. By embedding the numerically estimated reservoir physical parameters of the Qinshui Basin into the numerical model, multi-field couplings during CBM production, the evolution of physical parameters, and the depth-dependent effects on production characteristics were revealed. The main findings are as follows: The inhibitory effect of water on CBM recovery consistently exceeds the promoting effect of temperature. As burial depth expands, the inhibitory effect first diminishes, then intensifies, ranging from 19.73% to 28.41%, while the thermal promotion effect exhibits a monotonically increasing trend, fluctuating between 8.55% and 16.33% and stabilizing below 1000 m. Temperature and burial depth do not alter the trend in gas production rate. For equilibrium permeability, reproducing a decrease–increase–decrease rate pattern requires explicit inclusion of water and matrix-fracture mass exchange terms, which can explain why different scholars obtained varying gas production rate trends using the THM model. Matrix adsorption-induced strain is the primary control on permeability evolution, and temperature amplifies the magnitude of permeability change. The critical depth essentially reflects the statistical characteristics of reservoir petrophysical properties. A dimensionless critical depth criterion has been proposed, which comprehensively considers reservoir pressure, permeability, and a fractional coverage index. For burial depths ranging from 650 to 1350 m, the TP-D-THM model can be simplified to the gas-mechanical model accounts for matrix dynamic diffusion (D-HM) with an error below 5%, indicating that thermal and water effects nearly cancel each other. Full article
(This article belongs to the Special Issue Innovations in Rock Mechanics and Mining Engineering)
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14 pages, 2020 KB  
Article
Onset of Convection Cells Within Insulated Building Walls
by Stefano Lazzari, Michele Celli, Antonio Barletta and Pedro Vayssière Brandão
Energies 2025, 18(21), 5725; https://doi.org/10.3390/en18215725 - 30 Oct 2025
Viewed by 107
Abstract
The linear stability of convection in a vertical two-layer porous structure representing a building external wall is studied. The wall is confined by two open vertical boundaries kept at different but uniform temperatures and is composed of two homogeneous porous layers, characterized by [...] Read more.
The linear stability of convection in a vertical two-layer porous structure representing a building external wall is studied. The wall is confined by two open vertical boundaries kept at different but uniform temperatures and is composed of two homogeneous porous layers, characterized by different values of permeability and thermal conductivity. The aim of this paper is investigating whether the wall can undergo the transition to thermal instability, namely, the onset of a multicellular convective pattern. The basic stationary state, given by the fully developed buoyant flow in the vertical direction, is perturbed by means of small-amplitude disturbances, and the resulting eigenvalue problem for neutrally stable modes is studied numerically. The solution of the perturbed governing equations shows that, for suitable values of the governing parameters, thermal instability can arise. The results highlight that the ratio of the permeabilities of the two layers as well as the ratio of their thermal conductivities, together with the aspect ratio between their thicknesses, are key parameters for the possible onset of instability. The temperature difference between the two open boundaries that can trigger instability is determined with reference to practical cases, namely, insulated walls that fulfill the Italian requirements in terms of overall thermal transmittance. Full article
(This article belongs to the Section G: Energy and Buildings)
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22 pages, 11649 KB  
Article
Dual-Modified A- and B-Type Wheat Starch–PCL Composite Films: Antibacterial and HACCP-Oriented Biodegradable Packaging from Kazakhstani Resources
by Gulnazym Ospankulova, Saule Saduakhasova, Svetlana Kamanova, Dana Toimbayeva, Indira Temirova, Zhainagul Kakimova, Yernaz Yermekov, Berdibek Bulashev, Tultabayeva Tamara and Marat Muratkhan
Foods 2025, 14(21), 3730; https://doi.org/10.3390/foods14213730 - 30 Oct 2025
Viewed by 136
Abstract
Biodegradable packaging based on starch–polycaprolactone (PCL) composites is a promising route to reduce reliance on petroleum-derived plastics. Here, wheat starches with A- and B-type crystallinity—sourced from Kazakhstani varieties—were dual-modified by electron-beam irradiation followed by acetylation and incorporated into PCL (30–50 wt%) via melt [...] Read more.
Biodegradable packaging based on starch–polycaprolactone (PCL) composites is a promising route to reduce reliance on petroleum-derived plastics. Here, wheat starches with A- and B-type crystallinity—sourced from Kazakhstani varieties—were dual-modified by electron-beam irradiation followed by acetylation and incorporated into PCL (30–50 wt%) via melt extrusion and compression molding. The resulting films were characterized for morphology, mechanical performance, water-vapor permeability (WVP), thermal behavior, antibacterial activity, and biodegradation under soil and composting conditions. Acetylated A-type starch dispersed more uniformly within the PCL matrix, yielding smoother surfaces, higher tensile strength, and moderate WVP. In contrast, B-type starch produced a more porous microstructure with increased WVP and accelerated mass loss during composting (up to ~45% within 10 days at higher starch loadings). Incorporation of starch slightly decreased thermal stability relative to neat PCL, while agar-diffusion assays against Escherichia coli and Staphylococcus aureus showed loading-dependent inhibition zones, with A-type composites generally outperforming B-type at equivalent contents. Taken together, A-type starch–PCL films are better suited for applications requiring mechanical integrity and controlled moisture transfer, whereas B-type systems favor breathable packaging and rapid compostability. These results clarify how starch crystalline type governs structure–property–degradation relationships in PCL composites and support the targeted design of sustainable packaging materials using regionally available starch resources. Full article
(This article belongs to the Section Food Packaging and Preservation)
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20 pages, 2850 KB  
Article
Effect of the Addition of Acetylated Polysaccharides on the Properties of an Active Packaging Based on Polysuccinimide and Oregano Essential Oil
by Ignacio Antonio Hernández-Pérez, María Hernández-González, Alejandro Vega-Rios, América Chávez-Martínez, Ana Luisa Rentería-Monterrubio, Rogelio Sánchez-Vega, Ana Margarita Rodríguez-Hernández, Mario Alberto Morales-Ovando and Juan Manuel Tirado-Gallegos
Polymers 2025, 17(21), 2903; https://doi.org/10.3390/polym17212903 - 30 Oct 2025
Viewed by 273
Abstract
Polysuccinimide (PSI) is a biodegradable, extended-release polymer with great potential for developing active food packaging. In this study, we prepared PSI films functionalized with oregano essential oil (OEO, 3.5% w/w) and reinforced with acetylated polysaccharides (corn starch and microcellulose from [...] Read more.
Polysuccinimide (PSI) is a biodegradable, extended-release polymer with great potential for developing active food packaging. In this study, we prepared PSI films functionalized with oregano essential oil (OEO, 3.5% w/w) and reinforced with acetylated polysaccharides (corn starch and microcellulose from Agave Lechuguilla Torr fibers) with different degrees of substitution (DS; 0.44–1.25) at a constant concentration (22% w/w). Tensile strength (0.86–1.34 MPa), elasticity modulus (0.96–1.65 MPa) and elongation at break (14.16–21.66%) increased (p < 0.05) with DS in the reinforcing materials. The moisture content and solubility decreased from 13.17% to 9.81% and from 45.64% to 38.75%, respectively. With increasing DS, water vapor permeability (WVP) decreased by up to 56.4% compared to the control film (unacetylated polysaccharides). The DS of the reinforcing materials did not affect the antioxidant activity. Antibacterial activity against Escherichia coli and Staphylococcus aureus revealed similar inhibition halos for both bacteria, regardless of the DS. Thermogravimetric and calorimetric analysis showed that reinforcing PSI films with acetylated materials improves thermal stability. The results of this research suggest that PSI, a polymer derived from the thermal polymerization of aspartic acid, has significant potential for the development of eco-friendly active packaging for food products. Full article
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20 pages, 3935 KB  
Article
In Silico Identification of the NLRP3 Inhibitors from Traditional Chinese Medicine
by Shunjiang Jia, Huanling Lai, Xinyu Chen, Jiajie Lu, Wei Ding, Dongxiao Cui, Peng Zhao, Qiao Zhang, Yuwei Wang and Chunsong Cheng
Int. J. Mol. Sci. 2025, 26(21), 10569; https://doi.org/10.3390/ijms262110569 - 30 Oct 2025
Viewed by 206
Abstract
NOD-like receptor protein 3 (NLRP3) inflammasome is a key mediator of inflammation and a promising therapeutic target. However, the discovery of novel and effective inhibitors of NLRP3 remains limited. A combined docking-based virtual screening (DBVS) and shape-based screening approach was applied to eight [...] Read more.
NOD-like receptor protein 3 (NLRP3) inflammasome is a key mediator of inflammation and a promising therapeutic target. However, the discovery of novel and effective inhibitors of NLRP3 remains limited. A combined docking-based virtual screening (DBVS) and shape-based screening approach was applied to eight traditional Chinese medicine (TCM) databases to identify potential NLRP3 inhibitors. Structural similarity analysis, ADMET prediction, and molecular dynamics (MD) simulations were performed to evaluate structural novelty, pharmacokinetic properties, and binding stability. A total of 25 potential NLRP3 inhibitors were identified, each exhibiting docking scores higher than those of the reference inhibitor XE3. Structural similarity analysis revealed that the screened compounds exhibited low similarity to previously reported NLRP3 inhibitors, demonstrating their structural novelty. ADMET evaluation indicated that compounds C2, C3, and C4 exhibited favorable physicochemical and pharmacokinetic properties. Molecular dynamics (MD) simulations demonstrated that the complexes of compounds C2, C3, and C4 with NLRP3 remained stable throughout the simulations, exhibiting limited backbone fluctuations and compact conformations, as indicated by Rg values of approximately 6 Å. Solvent-accessible surface area (SASA) and polar surface area (PSA) analyses suggested that compounds C3 and C4 were tightly solvated and maintained favorable membrane permeability. Notably, binding free energy calculations revealed that all three compounds exhibited stronger binding than XE3, with compound C3 showing the most favorable energy (–48.81 ± 3.89 kcal/mol), indicating a highly stable and energetically preferred interaction with NLRP3. This study identified promising TCM-derived compounds as potential NLRP3 inhibitors, offering new directions for anti-inflammatory drug development. Full article
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29 pages, 12281 KB  
Article
Evaluation of Fracturing Effect of Coalbed Methane Wells Based on Microseismic Fracture Monitoring Technology: A Case Study of the Santang Coalbed Methane Block in Bijie Experimental Zone, Guizhou Province
by Shaolei Wang, Chuanjie Wu, Pengyu Zheng, Jian Zheng, Lingyun Zhao, Yinlan Fu and Xianzhong Li
Energies 2025, 18(21), 5708; https://doi.org/10.3390/en18215708 - 30 Oct 2025
Viewed by 82
Abstract
The evaluation of the fracturing effect of coalbed methane (CBM) wells is crucial for the efficient development of CBM reservoirs. Currently, studies focusing on the evaluation of the hydraulic fracture stimulation effect of coal seams and the integrated analysis of “drilling-fracturing-monitoring” are relatively [...] Read more.
The evaluation of the fracturing effect of coalbed methane (CBM) wells is crucial for the efficient development of CBM reservoirs. Currently, studies focusing on the evaluation of the hydraulic fracture stimulation effect of coal seams and the integrated analysis of “drilling-fracturing-monitoring” are relatively insufficient. Therefore, this paper takes three drainage and production wells in the coalbed methane block on the northwest wing of the Xiangxia anticline in the Bijie Experimental Zone of Guizhou Province as the research objects. In view of the complex geological characteristics of this area, such as multiple and thin coal seams, high gas content, and high stress and low permeability, the paper systematically summarizes the results of drilling and fracturing engineering practices of the three drainage and production wells in the area, including the application of key technologies such as a two-stage wellbore structure and the “bentonite slurry + low-solid-phase polymer drilling fluid” system to ensure wellbore stability, low-solid-phase polymer drilling fluid for wellbore protection, and staged temporary plugging fracturing. On this basis, a study on microseismic signal acquisition and tomographic energy inversion based on a ground dense array was carried out, achieving four-dimensional dynamic imaging and quantitative interpretation of the fracturing fractures. The results show that the fracturing fractures of the three drainage and production wells all extend along the direction of the maximum horizontal principal stress, with azimuths concentrated between 88° and 91°, which is highly consistent with the results of the in situ stress calculation from the previous drilling engineering. The overall heterogeneity of the reservoir leads to the asymmetric distribution of fractures, with the transformation intensity on the east side generally higher than that on the west side, and the maximum stress deformation influence radius reaching 150 m. The overall transformation effect of each well is good, with the effective transformation volume ratio of fracturing all exceeding 75%, and most of the target coal seams are covered by the fracture network, significantly improving the fracture connectivity. From the perspective of the transformed planar area per unit fluid volume, although there are numerical differences among the three wells, they are all within the effective transformation range. This study shows that microseismic fracture monitoring technology can provide a key basis for the optimization of fracturing technology and the evaluation of the production increase effect, and offers a solution to the problem of evaluating the hydraulic fracture stimulation effect of coal seams. Full article
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25 pages, 3511 KB  
Article
Impact of Injected Water Chemistry on Mineral Precipitation and Dissolution in Medium–Deep Geothermal Systems: A Case Study of the Wumishan Formation Dolomite Reservoir
by Zheng Liu, Bo Feng, Kiryukhin Alexey, Jian Shen, Siqing He and Yilong Yuan
Water 2025, 17(21), 3099; https://doi.org/10.3390/w17213099 - 29 Oct 2025
Viewed by 297
Abstract
The geochemical characteristics of reinjection fluids play a crucial role in controlling water–rock interactions and the long-term stability of geothermal reservoirs. This study aims to evaluate how different fluid chemistries affect mineral dissolution–precipitation behavior and ion migration during geothermal reinjection. Five types of [...] Read more.
The geochemical characteristics of reinjection fluids play a crucial role in controlling water–rock interactions and the long-term stability of geothermal reservoirs. This study aims to evaluate how different fluid chemistries affect mineral dissolution–precipitation behavior and ion migration during geothermal reinjection. Five types of reinjection water—including geothermal source water (i.e., formation water from the reservoir), primary and secondary treated waters, and their mixtures—were reacted with carbonate rocks from the Wumishan Formation of the Xiong’an New Area, North China Basin, under reservoir-like conditions (70 °C, 17 MPa). A combination of batch experiments, inverse modeling using PHREEQC, and one-dimensional reactive transport simulations was employed. Results show that fluid pH, ionic strength, and saturation state significantly influence reaction pathways. Alkaline-treated waters enhanced silicate dissolution, increasing Na+, K+, and Si concentrations, while source water and its mixtures promoted carbonate precipitation, increasing the risk of clogging. Simulations revealed that the early injection stage is the most reactive, with rapid ion front advancement and strong mineral transformations. Reaction-controlled ions such as Ca2+ and SO42− formed enrichment zones, while conservative ions like Na+ and Cl propagated more uniformly. Moderate alkaline regulation was found to mitigate carbonate scaling and improve silicate reactivity, thereby reducing permeability loss. This integrated approach provides mechanistic understanding and practical guidance for reinjection fluid design in medium-to-deep geothermal systems. Full article
(This article belongs to the Section Hydrogeology)
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48 pages, 5070 KB  
Article
Dual Inhibitory Potential of Conessine Against HIV and SARS-CoV-2: Structure-Guided Molecular Docking Analysis of Critical Viral Targets
by Ali Hazim Abdulkareem, Meena Thaar Alani, Sameer Ahmed Awad, Safaa Abed Latef Al-Meani, Mohammed Mukhles Ahmed, Elham Hazeim Abdulkareem and Zaid Mustafa Khaleel
Viruses 2025, 17(11), 1435; https://doi.org/10.3390/v17111435 - 29 Oct 2025
Viewed by 308
Abstract
Human immunodeficiency virus (HIV-1) and SARS-CoV-2 continue to co-burden global health, motivating discovery of broad-spectrum small molecules. Conessine, a steroidal alkaloid, has reported membrane-active and antimicrobial properties but remains underexplored as a dual antiviral chemotype. To interrogate conessine’s multi-target antiviral potential against key [...] Read more.
Human immunodeficiency virus (HIV-1) and SARS-CoV-2 continue to co-burden global health, motivating discovery of broad-spectrum small molecules. Conessine, a steroidal alkaloid, has reported membrane-active and antimicrobial properties but remains underexplored as a dual antiviral chemotype. To interrogate conessine’s multi-target antiviral potential against key enzymatic and entry determinants of HIV-1 and SARS-CoV-2 and to benchmark performance versus approved comparators. Eight targets were modeled: HIV-1 reverse transcriptase (RT, 3V81), protease (PR, 1HVR), integrase (IN, 3LPT), gp120–gp41 trimer (4NCO); and SARS-CoV-2 main protease (Mpro, 6LU7), papain-like protease (PLpro, 6W9C), RNA-dependent RNA polymerase (RdRp, 7BV2), spike RBD (6M0J). Ligands (conessine; positive controls: dolutegravir for HIV-1, nirmatrelvir for SARS-CoV-2) were prepared with standard protonation, minimized, and docked using AutoDock Vina v 1.2.0exhaustiveness 4; 20 poses). Binding modes were profiled in 2D/3D. Protocol robustness was verified by re-docking co-crystallized ligands (RMSD ≤ 2.0 Å). Atomistic MD (explicit TIP3P, OPLS4, 300 K/1 atm, NPT; 50–100 ns) assessed pose stability (RMSD/RMSF), pocket compaction (Rg, volume), and interaction persistence; MM/GBSA provided qualitative energy decomposition. ADMET was predicted in silico. Conessine showed coherent, hydrophobically anchored binding across both viral panels. Best docking scores (kcal·mol−1) were: HIV-1—PR −6.910, RT −6.672, IN −5.733; SARS-CoV-2—spike RBD −7.025, Mpro −5.745, RdRp −5.737, PLpro −5.024. Interaction maps were dominated by alkyl/π-alkyl packing to catalytic corridors (e.g., PR Ile50/Val82, RT Tyr181/Val106; Mpro His41/Met49; RBD L455/F486/Y489) with occasional carbon-/water-mediated H-bonds guiding orientation. MD sustained low ligand RMSD (typically ≤1.6–2.2 Å) and damped RMSF at catalytic loops, indicating pocket rigidification; MM/GBSA trends (≈ −30 to −40 kcal·mol−1, dispersion-driven) supported persistent nonpolar stabilization. Benchmarks behaved as expected: dolutegravir bound strongly to IN (−6.070) and PR (−7.319) with stable MD; nirmatrelvir was specific for Mpro and displayed weaker, discontinuous engagement at PLpro/RdRp/RBD under identical settings. ADMET suggested conessine has excellent permeability/BBB access (high logP), but liabilities include poor aqueous solubility, predicted hERG risk, and CYP2D6 substrate dependence.Conessine operates as a hydrophobic, multi-target wedge with the most favorable computed engagement at HIV-1 PR/RT and the SARS-CoV-2 spike RBD, while maintaining stable poses at Mpro and RdRp. The scaffold merits medicinal-chemistry optimization to improve solubility and de-risk cardiotoxicity/CYP interactions, followed by biochemical and cell-based validation against prioritized targets. Full article
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21 pages, 15736 KB  
Article
Coupling Mechanism and Management of Groundwater Dynamics and Land Use in Arid Inland Basins (Wuwei, China)
by Pucheng Zhu, Lifang Wang, Min Liu, Xiaosi Su and Zhenlong Nie
Water 2025, 17(21), 3080; https://doi.org/10.3390/w17213080 - 28 Oct 2025
Viewed by 297
Abstract
Arid inland basins represent critical hotspots of intensified conflict among water resources, ecological integrity, and economic development on a global scale. The coevolution of groundwater systems and land use patterns plays a pivotal role in shaping regional sustainability trajectories. This study synthesizes multi-source [...] Read more.
Arid inland basins represent critical hotspots of intensified conflict among water resources, ecological integrity, and economic development on a global scale. The coevolution of groundwater systems and land use patterns plays a pivotal role in shaping regional sustainability trajectories. This study synthesizes multi-source data spanning 2000 to 2020 from the Wuwei Basin, located within the Shiyang River watershed in China, to elucidate the synergistic dynamics between hydrological and land use transformations. Key findings reveal: (1) Around 2010, a significant structural shift in land use occurred, transitioning from production-oriented expansion to ecologically driven priorities. This shift was characterized by a reduction in cultivated land, increased utilization of artificial surfaces, and accelerated ecological restoration efforts. These changes were jointly influenced by enhanced water governance frameworks and spatial planning policies. (2) Groundwater levels exhibit marked spatial variability. While stability is maintained in piedmont and discharge zones, persistent overdraft has led to pronounced declines in transitional and distal recharge areas. This heterogeneity is primarily governed by the interplay of hydrogeological factors—such as recharge capacity and aquifer permeability—and anthropogenic pressures, including the extent of cultivated land and intensity of groundwater extraction. Notably, these patterns cannot be explained solely by the proportion of cultivated land or total extraction volumes. (3) A positive feedback mechanism—termed the “gain-loss regime shift”—has been identified in the discharge zone, where simultaneous increases in groundwater extraction and water-level recovery are observed. However, human activities have disrupted the natural coupling between precipitation and groundwater recharge, resulting in a significant attenuation of recharge rates (exceeding 80%). These findings offer a robust scientific basis for implementing spatially differentiated water resource management strategies and optimizing land use in arid basin environments. The implications extend beyond regional contexts, contributing to broader efforts in harmonizing human–environment interactions globally. Full article
(This article belongs to the Section Hydrogeology)
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21 pages, 3483 KB  
Article
Field Validation of OTR-Modified Atmosphere Packaging Under Controlled Atmosphere Storage for Korean Melon Export to Vietnam
by Tae-Yeong Ko, Sang-Hoon Lee, Yoo-Han Roh, Jeong Gu Lee, Haejo Yang, Min-Sun Chang, Ji-Hyun Lee and Kang-Mo Ku
Horticulturae 2025, 11(11), 1295; https://doi.org/10.3390/horticulturae11111295 - 28 Oct 2025
Viewed by 451
Abstract
Korean melon (K-melon, Cucumis melo L. var. makuwa) is a key horticultural crop in the Republic of Korea, but its short shelf life restricts long-distance export. This study evaluated the modified atmosphere (MA) films of varying oxygen transmission rates (OTR) at controlled atmosphere [...] Read more.
Korean melon (K-melon, Cucumis melo L. var. makuwa) is a key horticultural crop in the Republic of Korea, but its short shelf life restricts long-distance export. This study evaluated the modified atmosphere (MA) films of varying oxygen transmission rates (OTR) at controlled atmosphere (CA) storage under real maritime export conditions to Vietnam. In the non-permeable OTR 0 (Control) treatment, internal O2 rapidly declined below the anaerobic compensation point (1.67% at 10d and 0.47% at 10+3d) while CO2 accumulated to 32–36%. This ultra-low oxygen environment induced anaerobic metabolism, evidenced by strong accumulation of fermentative metabolites such as lactic acid, acetoin, and 2,3-butanediol, along with glucose/fructose retention and increases in alanine and γ-Aminobutanoic acid (GABA). These changes disrupted glycolysis and the Tricarboxylic acid cycle (TCA), consistent with CA shock, and were accompanied by rind blackening, elevated weight loss, and hue angle shifts toward yellow-orange. By contrast, OTR 10,000 and OTR 30,000 films significantly suppressed weight loss and color changes. Partial least squares-discriminant analysis (PLS-DA) identified volatile organic compounds, namely acetoin, 2,3-butanediol, and hexanal, as key discriminant metabolites, with OTR 30,000 clearly separated from other treatments at 10+3d, indicating minimal fermentation and oxidative stress. Microbial assays revealed a dose-dependent reduction in bacterial counts with increasing OTR, while fungal growth was most strongly suppressed under OTR 10,000. Overall, OTR 30,000 maintained the lowest and most stable levels of stress-related metabolites, minimized microbial proliferation, and preserved metabolic stability throughout shipping. This study provides the first quantitative evidence of anaerobic metabolic transition and primary metabolite accumulation in K-melons under actual export trials. The findings demonstrate that optimizing MA film permeability, particularly OTR 30,000 films, offers a practical and cost-efficient strategy to extend shelf life, maintain quality stability, and enhance the global export potential of K-melons. Full article
(This article belongs to the Section Postharvest Biology, Quality, Safety, and Technology)
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22 pages, 4115 KB  
Article
Novel Chitosan-Based Materials to Promote Water Disinfection and Degradation of Contaminants
by Giulio Farinelli, Héloïse Baldo, Laurence Soussan, Flora Lefèbvre, Katell Sénéchal-David, Jean-Noël Rebilly, Frédéric Banse and Damien Quemener
Water 2025, 17(21), 3077; https://doi.org/10.3390/w17213077 - 28 Oct 2025
Viewed by 320
Abstract
This study explores chitosan (CS)-based materials for water purification, assessing their disinfection and contaminant degradation capabilities. A reproducible protocol was developed to fabricate homogeneous, stable CS films, validated through permeability testing and characterized using thermal (TGA), mechanical (tensile strength, elongation), and physico-chemical (FTIR-ATR, [...] Read more.
This study explores chitosan (CS)-based materials for water purification, assessing their disinfection and contaminant degradation capabilities. A reproducible protocol was developed to fabricate homogeneous, stable CS films, validated through permeability testing and characterized using thermal (TGA), mechanical (tensile strength, elongation), and physico-chemical (FTIR-ATR, water contact angle, SEM-EDX) analyses. A catalyst was employed to complex iron ions and crosslink CS chains via acrylamide functions, stabilizing the CS structure and reducing washout in water. Disinfection tests showed that pure CS exhibited strong antimicrobial activity under varying contamination levels, attributed to direct contact and slight dissolution. Functionalized CS materials acted as catalytic surfaces, requiring hydrogen peroxide (H2O2) to generate reactive oxygen species (ROS). This ROS-mediated process effectively disinfected high bacteria loads and degraded phenol. Electron paramagnetic resonance (EPR) confirmed hydroxyl radicals as the primary active species when H2O2 was present. Under lower contamination levels, residual CS within the functionalized material contributed to direct antimicrobial effects, demonstrating a synergistic action between CS and ROS. These findings highlight CS as a reliable disinfectant and functionalized CS as a versatile material for ROS-driven antimicrobial action and contaminant degradation. The results suggest potential for scalable, sustainable water treatment applications. Future work will focus on optimizing the catalyst structure to enhance ROS production and improve contaminant removal efficiency. Full article
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21 pages, 1579 KB  
Article
Sequence Permutation Generated Lysine and Tryptophan-Rich Antimicrobial Peptides with Enhanced Therapeutic Index
by Kuang-Li Peng, Yu-Hsuan Wu, Hsuan-Che Hsu and Jya-Wei Cheng
Antibiotics 2025, 14(11), 1077; https://doi.org/10.3390/antibiotics14111077 - 26 Oct 2025
Viewed by 489
Abstract
Background/Objectives: Antimicrobial peptides (AMPs) are promising therapeutic agents due to their broad-spectrum activity against bacteria, viruses, and fungi. Unlike traditional antibiotics, AMPs target microbial membranes directly and are less likely to induce resistance. They also possess immunomodulatory and wound-healing properties. However, clinical application [...] Read more.
Background/Objectives: Antimicrobial peptides (AMPs) are promising therapeutic agents due to their broad-spectrum activity against bacteria, viruses, and fungi. Unlike traditional antibiotics, AMPs target microbial membranes directly and are less likely to induce resistance. They also possess immunomodulatory and wound-healing properties. However, clinical application remains limited by factors such as salt sensitivity, low bioavailability, and poor stability. To address these challenges, researchers have turned to structural optimization strategies. Recently, artificial intelligence (AI) has facilitated peptide drug design by rapidly screening large peptide libraries. Still, AI struggles to predict how subtle sequence changes affect peptide structure and function. Traditional sequence permutation offers a complementary approach by analyzing structural and functional effects without altering amino acid composition. Methods: In this study, we applied a clockwise sequence permutation strategy to the AMP W5K/A9W, generating derivative peptides with identical molecular weight, net charge, and hydrophobicity. We aimed to investigate how lysine and tryptophan distribution affects antimicrobial activity, membrane permeability, and selectivity. We assessed the secondary structures using circular dichroism (CD) spectroscopy and evaluated in vitro antimicrobial activity, salt resistance, membrane-permeabilizing ability, hemolysis, and wound healing effects. Results: The results revealed that the sequence arrangement of key residues significantly impacts peptide bioactivity and therapeutic index. Conclusions: This study highlights the importance of sequence order in determining AMP function. It also supports integrating permutation strategies with AI-based design to enhance AMP discovery. Together, these approaches offer new opportunities to combat drug-resistant pathogens and advance next-generation anti-infective therapies. Full article
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