Search Results (30)

Dominant species form species-specific fine-scale vegetation matrices in grasslands that regulate community dynamics, diversity and ecosystem functioning. The structure of these dynamic microscale landscapes was analyzed and compared between primary and secondary plant communities. We explored fine-scale monitoring data along permanent transects over seven consecutive years. Spatial and temporal patterns of dominant grass species (Festuca valesiaca, Alopecurus pratensis and Poa angustifolia) were analyzed using information theory models. These matrix-forming species showed high spatiotemporal variability in all grasslands. However, consistent differences were found between primary and secondary grasslands in the spatial and temporal organization of the vegetation matrix. Alopecurus pratensis and Poa angustifolia had coarse-scale patchiness with stronger aggregation in secondary grasslands. The spatial patterns of Festuca valesiaca were nearly random in both types of grasslands. Strong associations were observed among the spatial patterns of each species across years, with a stronger dependence in secondary grasslands. In contrast, the rate of fine-scale dynamics was higher in primary grasslands. The complexity of microhabitats within the matrix was higher in primary grasslands, often involving two to three dominant species, while, in secondary grasslands, patches formed by a single dominant species were more frequent. In the spatial variability of small-scale subordinate species richness, significant, temporally consistent differences were found. Higher variability in secondary grasslands suggests stronger and more spatially variable microhabitat filtering. We recommend that grassland management and restoration practices be guided by preliminary information on the spatial organization of primary grasslands. Enhancing the complexity of the matrix formed by dominant species can further improve the condition of secondary grasslands. Full article

Although marine caves are among the most species-diverse habitats in the Mediterranean Sea, most available studies have focused on their sessile fauna. This study provides the first quantitative assessment of motile fauna in 27 marine caves across four geographical subareas of the Aegean and Ionian Seas, using a rapid assessment visual census protocol, applied through 3 min time transects in each ecological cave zone. Multivariate analysis revealed that the motile community structure of the cave entrance was differentiated from that of the semidark and dark zones. Deeper caves were distinct from shallower ones while caves of the east Aegean differed from those around Crete Island. A total of 163 taxa were recorded, 27 of which are reported herein for the first time in marine caves of the eastern Mediterranean Sea, while three species (two native and one introduced) are recorded in Greek waters for the first time, enriching our knowledge on the permanent and occasional cave residents. Seventeen species were introduced, comprising more than half of the total fish abundance in the southeasternmost cave. Our limited knowledge of the motile fauna of Mediterranean marine caves coupled with the continued spread of introduced species highlights the urgent need for monitoring and conservation actions, especially within marine protected areas. Full article

Bladder dysfunction is among the most drastic and quality-of-life-reducing conditions after spinal cord injury (SCI). Neuroinflammation in the lower urinary tract (LUT) after SCI could be a key driver of neurogenic bladder dysfunction and tissue fibrosis. Leukotrienes, a group of highly active lipid mediators, are potent inflammatory mediators. Here, we explored the potential of early montelukast (MLK) therapy, a cysteinyl leukotriene receptor 1 antagonist, on LUT function and structure four weeks after severe SCI in rats. Rats (strain Lewis, female, n = 50) received a permanent bladder catheter, followed by a complete T9 spinal cord transection. MLK was given daily, starting on day one post-injury. Bladder and locomotor function were regularly assessed. Bladder tissue was histologically and immunhistochemically analyzed. Post-SCI, MLK concentrations in plasma and cerebrospinal fluid were clinically relevant. MLK improved bladder functionality. MLK had no impact on smooth muscle alignment and uroepithelial integrity at this early SCI time point. This pilot study gave first insights into early, continuous oral MLK treatment with the first promising results of preserved LUT function and possible subsequent improved tissue integrity. Full article

Climate change has become a prominent topic, particularly regarding plant adaptation and migration within mountain ecosystems. This study aimed to clarify forest dynamics by focusing on sapling and tree stages in relation to microclimate changes across a permanent plot along an altitudinal gradient. In 2012, a permanent transect plot (50 m × 600 m) was established at the forest ecotone between the deciduous dipterocarp forest (DDF) and lower montane forest (LMF). All trees with a diameter at breast height ≥ 1 cm were tagged, measured, and identified. Monitoring occurred every 2 years between 2012, 2014, 2016, and 2018, with a final census conducted in 2023. Microclimatic factors were recorded automatically, and rainfall data were obtained from a meteorological station. The dynamics of all trees were analyzed in relation to micro-climate changes. Our results showed that environmental changes significantly affected species coexistence, particularly in the forest ecotone between the DDF and LMF, where intermediate environmental factors were observed. High mortality rates were observed in the dominant evergreen species, with significant positive correlations with decreased rainfall and increased temperature, suggesting that drought conditions strongly influence tree mortality. In contrast, the deciduous species showed increased density, particularly in the forest ecotone zone, indicating their better adaptation to drought conditions and their potential to occupy the forest ecotone at a higher rate than LMF species. Understanding the ecological niches of coexisting species along altitudinal gradients is crucial for developing effective restoration programs in mountainous ecosystems. Full article

Steppe pastures are characteristic of the Armenian landscape and play an important role in supporting livelihoods and biodiversity conservation. The productivity and biodiversity of steppe pastures depend on grazing management, soil types, and climatic and topographical characteristics. As a whole, they form local small-scale sites. Our data on five study sites located on the southeast slope of Mt. Aragats summarized the impact of sites and grazing on canopy height; productivity; grass, legume, and forb biomass; nitrogen, phosphorus, and potassium concentrations; pH; and litter contents in the soil. Five grazed and ungrazed plots (ca. 600–800 m²) were established at each study site. Within each plot, two permanent 40 m long transects were installed. The canopy height was recorded in ungrazed and freely grazed plots. The aboveground biomass was cut at the soil surface from May to June; grouped into grass, legumes, and forbs; dried; and weighed. Soil samples were collected in every ungrazed and freely grazed plot. The results indicated that grazing decreased the plant parameters and nitrogen and litter content across all sites, while it had no effect on the phosphorus and potassium content or the pH. It seems that plant parameters, as well as soil parameters, were more affected by the management strategy than by the topographical and climatic features of the sites, as revealed via redundancy analysis. Our results suggest that it is important to introduce livestock rotation practices for sites with respect to the sustainable management of steppe pastures. This management strategy could ensure ecosystem services, high forage quality, and soil fertility. Full article

The impact of ungulate browsing on tree saplings has been found to have a negative effect on the regeneration of temperate forests. However, it remains ambiguous whether a relationship exists between browsing intensity and soil quality in natural forests. Therefore, we conducted a study in Roztoczańskie National Park to investigate the relationship between soil quality and browsing intensity for tree saplings. The aim was to gain a better understanding of how soil quality affects the browsing of ungulates on tree species. Baseline data (sapling height, basal diameter, crown length and width, browsed-shoot diameter, and soil samples) were collected from the 22 belt transects established in the permanent research plots. The soil quality index was calculated using physical and chemical soil properties. Twig dry mass was determined using allometric equations. Species relative density and browsing intensity were assessed through field measurements. Relationships between the variables were established using a linear regression model. The results suggest that browsing intensity is influenced by the gradient of the soil quality index and that it varies between tree species. Along the increasing soil quality gradient, tree species’ relative density (p = 0.012) and twig dry mass m⁻² (p = 0.005) significantly decreased for A. pseudoplatanus. In contrast, browsing intensity increased significantly with an increasing species relative density for A. pseudoplatanus (p = 0.00) and C. betulus (p = 0.001) and with an increasing twig dry mass for F. sylvatica (p = 0.034) and C. betulus (p = 0.004). Browsing intensity increased significantly with an increasing soil quality index for F. sylvatica (p = 0.027) and decreased significantly for A. pseudoplatanus (p = 0.036). Notably, there was a significant positive relationship between browsing intensity and species relative density and twig dry mass, indicating that ungulate browsing is concentrated where browsing is abundant. These results provide insights that can be used to improve management and conservation strategies to protect tree species vulnerable to ungulate herbivory. Full article

Peripheral nerve injuries (PNIs) occur frequently and can lead to devastating and permanent sensory and motor function disabilities. Systemic tacrolimus (FK506) administration has been shown to hasten recovery and improve functional outcomes after PNI repair. Unfortunately, high systemic levels of FK506 can result in adverse side effects. The localized administration of FK506 could provide the neuroregenerative benefits of FK506 while avoiding systemic, off-target side effects. This study investigates the utility of a novel FK506-impregnated polyester urethane urea (PEUU) nerve wrap to treat PNI in a previously validated rat infraorbital nerve (ION) transection and repair model. ION function was assessed by microelectrode recordings of trigeminal ganglion cells responding to controlled vibrissae deflections in ION-transected and -repaired animals, with and without the nerve wrap. Peristimulus time histograms (PSTHs) having 1 ms bins were constructed from spike times of individual single units. Responses to stimulus onsets (ON responses) were calculated during a 20 ms period beginning 1 ms after deflection onset; this epoch captures the initial, transient phase of the whisker-evoked response. Compared to no-wrap controls, rats with PEUU-FK506 wraps functionally recovered earlier, displaying larger response magnitudes. With nerve wrap treatment, FK506 blood levels up to six weeks were measured nearly at the limit of quantification (LOQ ≥ 2.0 ng/mL); whereas the drug concentrations within the ION and muscle were much higher, demonstrating the local delivery of FK506 to treat PNI. An immunohistological assessment of ION showed increased myelin expression for animals assigned to neurorrhaphy with PEUU-FK506 treatment compared to untreated or systemic-FK506-treated animals, suggesting that improved PNI outcomes using PEUU-FK506 is mediated by the modulation of Schwann cell activity. Full article

A spinal cord injury is a form of physical harm imposed on the spinal cord that causes disability and, in many cases, leads to permanent mammalian paralysis, which causes a disastrous global issue. Because of its non-regenerative aspect, restoring the spinal cord’s role remains one of the most daunting tasks. By comparison, the remarkable regenerative ability of some regeneration-competent species, such as some Urodeles (Axolotl), Xenopus, and some teleost fishes, enables maximum functional recovery, even after complete spinal cord transection. During the last two decades of intensive research, significant progress has been made in understanding both regenerative cells’ origins and the molecular signaling mechanisms underlying the regeneration and reconstruction of damaged spinal cords in regenerating organisms and mammals, respectively. Epigenetic control has gradually moved into the center stage of this research field, which has been helped by comprehensive work demonstrating that DNA methylation, histone modifications, and microRNAs are important for the regeneration of the spinal cord. In this review, we concentrate primarily on providing a comparison of the epigenetic mechanisms in spinal cord injuries between non-regenerating and regenerating species. In addition, we further discuss the epigenetic mediators that underlie the development of a regeneration-permissive environment following injury in regeneration-competent animals and how such mediators may be implicated in optimizing treatment outcomes for spinal cord injurie in higher-order mammals. Finally, we briefly discuss the role of extracellular vesicles (EVs) in the context of spinal cord injury and their potential as targets for therapeutic intervention. Full article

Previous studies provided evidence of the mixing of boreal–tropical cladocerans (Crustacea) in the Far East of Eurasia, as well as the presence of numerous pre-Pleistocene relict endemics. In this study, we hypothesize that the colonization history is reflected in the proportions of endemic/boreal/tropical taxa among different habitat types within this region. We analyzed 442 qualitative samples collected from seven sub-regions of the Far East of Russia and South Korea along a latitudinal transect of approximately 2200 km, where we identified 101 Cladocera species. Our results showed a significantly higher proportion of endemic taxa in the plankton compared to the littoral and benthic zones. The proportions of endemic/boreal/tropical taxa in the permanent and temporary waters were similar. We observed a distinct shift in dominance in benthos and littoral zone across our transect: boreal taxa were prevalent in the northern sub-regions (1–4), while tropical taxa were prevalent in the southern sub-regions (5–7), with a pronounced boreal–tropical transition zone (sub-regions 4–5). Our findings suggest that this pattern arose due to the unhindered dispersion of the two faunas in a latitudinal direction until they met at the boundary during their arrival in the Late Pleistocene. In contrast, the proportions of the boreal and tropical taxa in plankton did not exceed 16% in any of the studied sub-regions, and the proportion of boreal taxa decreased from 16% to 10%, while that of the tropical taxa increased from 0% to 10% from north to south. We propose that the lower proportions and the absence of mixing of fauna in the plankton can be explained by the strong presence (sometimes dominance) of relics that occupy these water bodies before the arrival of colonizers from the north and south. Our findings highlight the significant role of biotic interactions in the formation of biogeographic boundaries, which was previously underestimated. Full article

Salt marshes are among the most valuable ecosystems on earth; however, previous research has reported global losses in their extent accompanied by an impairment of their ecological processes. Nonetheless, investigations on salt marsh vegetation ecology are still lacking in many sites, including in Ria de Aveiro. As such, this study aimed to (1) monitor, characterize, and understand the evolution of salt marsh vegetation communities at three different study sites with different environmental conditions and stages of degradation, where we also sought to (2) identify the main delimiting abiotic factors associated with the distribution of the main species. To do so, a multidisciplinary approach that involved the survey of vegetation from permanent transects and the collection of ecological, physicochemical, and hydrodynamic data at sampling points within the monospecific stands of the main species was reported. The results showed that, of the abiotic factors deemed as the main delimiting forces of salt marsh vegetation, the soil elevation and hydroperiod were the most restrictive factors, as they ultimately influenced species composition at the different study sites and explained most of the variation observed between the studied monospecific stands. Full article

Decreased water levels due to climate change cause many negative effects on lake ecosystems. The aim of this study was to (a) assess the effect of the reduction of water levels on nutrient availability in the sediment in the littoral zone; (b) evaluate the effect of changes in water level on biomass productivity and nutrient concentrations in the aboveground biomass of four emergent species: Phragmites australis (Cav.) Trin. ex Steud., Typha angustifolia L., Carex acutiformis L., Glyceria maxima (C. Hartm.) Holmb; and (c) assess the efficiency of the littoral zone in the reduction of nutrient pollution. The study hypothesis was that water level reduction has a positive effect on the plant biomass of high productive species. The study was carried out in the littoral zone of Tomickie Lake, situated in the western part of Poland. This lake is located in the protected area—the buffer zone of Wielkopolska National Park, and at the international level—Natura 2000. Six transects, perpendicular to the shoreline, were selected at two subzones—permanently and seasonally flooded. Analyses of nutrient concentrations in sediments and plant species were performed. The results show the higher productivity of reeds in the zone where water occurs seasonally at the site through the year, which reached 1193 g dry weight/m². The decline of the water level may lead to the increased growth of highly productive species as emergent vegetation with a broad ecological scale in terms of nutrient concentrations and changes of water depth, i.e., Phragmites australis (Cav.) Trin. ex Steud. Species that prefer growth in the deeper part of the lake will be characterized by lower productivity, despite the high availability of nutrients. Changes in the availability of nutrients may cause the intensification of lake overgrowth by very productive species, which may affect biodiversity, which is particularly high in protected areas. Full article

Permanent grasslands represent the main terrestrial ecosystem and serve as an important global reservoir of biodiversity, providing a wide range of benefits to humans and ecosystems. The effects of environment on permanent meadows (in our survey, they were centuries-old meadows that had not been plowed, mowed, or fertilized with manure) production have been adequately investigated in literature. However, plant species composition impact on potential feed value of first cut has still to be understood, in particular regarding different agronomic management. Our field trial was carried out in five farms, in a territory involved in the value chain of the Parmigiano Reggiano PDO (Val d’Enza, Northern Italy), over a two-year period (2017–2018). Differences in botanical composition, biomass, and Pastoral Value index (PV), which synthesizes grassland yield and nutritional parameters, were investigated in depth. The herbage dry matter (DM) yield was affected by year, farm, and their interaction factors. Its highest value across the two years was recorded in farm 5 (11.7 tons of DM ha⁻¹), which applied the highest rate of nitrogen fertilization. The botanical composition of the first cut has favored the presence of both Poaceae and ‘other species’ (each one around 40 plants per transect) compared to Fabaceae (seven plants per transect). However, higher numbers of Fabaceae plants (13 and 10) plausibly determined increases in PV in farms 3 and 5 (56.4 and 58.7, respectively). Although differences were observed among the most important nutritional parameters of grassland (crude protein, digestible and undigested neutral detergent fiber contents), suitable net energy for lactation (NE_L) values for feeding lactating cows were always recorded during the two years of survey. The present study provides a contribution of knowledge on how the botanical composition of permanent meadows may affect their potential nutritive value as fresh herbage for feeding dairy cows. Considering these results, the agronomic management should seek a level of plant biodiversity that at the same time might guarantee satisfactory yield and feed value, also in a context of climate change. Full article

Sub-Saharan Africa (SSA) is experiencing an increase in food insecurity, which is fueled by both high population growth and low agricultural productivity. Smallholder farmers are seriously affected by low soil fertility, land degradation, and poor agronomic management practices that reduce crop productivity. Therefore, there is a huge need for reliable soil information to support agricultural decision-making in smallholder farms to ensure sustainable agricultural production. However, most studies focused on land capability and soil suitability do not consider the spatial variability of soils and their inherent properties. The main objectives of this study were (1) to survey, classify and characterise soils at Makuleke farm in order to derive and map the land capability classes and (2) to quantify the physical and chemical properties of the soils in order to derive and map the suitability classes. A field survey and classification of soils led by transect walks complemented by auger holes revealed existential spatial variation of soils across the 12 ha banana plantation. The dominating soil forms in the plantation were Hutton, Westleigh, Glenrosa and Valsrivier. Land capability analysis revealed that 17% of the 12 ha portion of the farm had very high arable potential, while 60% had medium arable potential, 6% of the farm had low arable potential and 17% was considered non-arable. Subsequent soil suitability analysis revealed that 12% of the farm is highly suitable, 34% is moderately suitable, 38% is marginally suitable and 16% is permanently not suitable for banana production. The variable capability of the land and suitability of soils for banana production led to notable yield gaps. The in-depth description and quantification of the productive capacity of the land is pivotal to the farmers at Makuleke farm as it unlocks their true potential and such information is crucial to effectively manage the soil and utilize the land for sustainable banana production. Full article

Injury to the central nervous system (CNS) results in permanent damage and lack of function in most vertebrate animals, due to their limited regenerative capacities. In contrast, echinoderms can fully regenerate their radial nerve cord (RNC) following transection, with little to no scarring. Investigators have associated the regenerative capacity of some organisms to the stress response and inflammation produced by the injury. Here, we explore the gene activation profile of the stressed holothurian CNS. To do this, we performed RNA sequencing on isolated RNC explants submitted to the stress of transection and enzyme dissection and compared them with explants kept in culture for 3 days following dissection. We describe stress-associated genes, including members of heat-shock families, ubiquitin-related pathways, transposons, and apoptosis that were differentially expressed. Surprisingly, the stress response does not induce apoptosis in this system. Other genes associated with stress in other animal models, such as hero proteins and those associated with the integrated stress response, were not found to be differentially expressed either. Our results provide a new viewpoint on the stress response in the nervous system of an organism with amazing regenerative capacities. This is the first step in deciphering the molecular processes that allow echinoderms to undergo fully functional CNS regeneration, and also provides a comparative view of the stress response in other organisms. Full article

The largest underwater sculpture in the world, the ‘Coral Greenhouse’ by artist Jason deCaires Taylor, was commissioned by the Museum of Underwater Art and installed at John Brewer Reef, Australia, in December 2019. The planning process required certified engineering design drawings associated with design life, durability and suitability of materials, and baseline ecological surveys. Following approval, the operational phase required annual monitoring of substrate, ecology, social values, and marine debris. We geo-referenced three permanent transects and designed a before/after rapid monitoring assessment of substrate, fish, and invertebrates. Substrate surveys indicated 11% concrete and 89% sand. Fish surveys indicated significant increases of diversity and abundance, with 12 species and 65 individuals recorded in 2018 compared to 46 species and 365 individuals recorded in 2022. Macroinvertebrate species maintained no significant trends in abundance, species richness, and diversity with respect to time between 2018 and 2022. We monitored coral restoration and natural recruitment at the site, measuring aesthetics, survivorship of planted corals, and coral recruitment. Of 131 corals transplanted in March 2020, survivorship was 100% at 1 month, 92% at 6 months, and 91.6% at 12 months. Hard and soft corals were recruited to the structure at a density of 8.35 hard corals/m² and 10.9 soft corals/m² over 26 months. Full article