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42 Results Found

  • Article
  • Open Access
1 Citations
1,645 Views
17 Pages

Copy Number Variations in Short Tandem Repeats Modulate Growth Traits in Penaeid Shrimp Through Neighboring Gene Regulation

  • Hao Zhou,
  • Guangfeng Qiang,
  • Yan Xia,
  • Jian Tan,
  • Qiang Fu,
  • Kun Luo,
  • Xianhong Meng,
  • Baolong Chen,
  • Meijia Chen and
  • Sheng Luan
  • + 6 authors

18 January 2025

Penaeid shrimp, with its genomes enriched in short tandem repeats (STRs), presents an ideal model for studying the distribution and biological functions of STRs. In this study, we systematically identified and compared STRs across multiple species, c...

  • Article
  • Open Access
7 Citations
3,269 Views
21 Pages

Modulation of SREBP Expression and Fatty Acid Levels by Bacteria-Induced ER Stress Is Mediated by Hemocyanin in Penaeid Shrimp

  • Zishu Huang,
  • Xiaoyu Zheng,
  • Zeyan Chen,
  • Zhihong Zheng,
  • Defu Yao,
  • Shen Yang,
  • Yueling Zhang and
  • Jude Juventus Aweya

28 February 2023

Many environmental and pathogenic insults induce endoplasmic reticulum (ER) stress in animals, especially in aquatic ecosystems, where these factors are crucial for life. In penaeid shrimp, pathogens and environmental stressors induce hemocyanin expr...

  • Article
  • Open Access
3 Citations
1,207 Views
18 Pages

Integrative ATAC-Seq and RNA-Seq Analysis Reveals Key Transcription Factors Mediating Low Salinity Adaptation in Penaeid Shrimp

  • Chuntao Zhang,
  • Jianbo Yuan,
  • Roujing Li,
  • Zhanyuan Yang,
  • Man Luo,
  • Xiaoyun Zhong,
  • Jie Hu,
  • Shuqing Si,
  • Xiaojun Zhang and
  • Fuhua Li

Salinity serves as an important environmental factor in ecosystems, driving the evolution of adaptive strategies in euryhaline species. The Pacific white shrimp, Litopenaeus vannamei, is a representative euryhaline species. However, the molecular mec...

  • Review
  • Open Access
2 Citations
4,081 Views
17 Pages

Penaeid Shrimp Chromosome Studies Entering the Post-Genomic Era

  • Xiaojun Zhang,
  • Jianhai Xiang,
  • Jianbo Yuan and
  • Fuhua Li

7 November 2023

Chromosome studies provide the foundation for comprehending inheritance, variation, systematics, and evolution. Penaeid shrimps are a group of crustaceans with great economic importance. Basic cytogenetic information obtained from these shrimps can b...

  • Article
  • Open Access
2 Citations
6,818 Views
12 Pages

The purpose of this paper is to present a morphological description of three different types of acellular material lining hemal spaces in a shrimp, providing a background for addressing future questions. The vasculature of the penaeid shrimp, Sicyoni...

  • Article
  • Open Access
36 Citations
7,031 Views
16 Pages

Specific Molecular Signatures for Type II Crustins in Penaeid Shrimp Uncovered by the Identification of Crustin-Like Antimicrobial Peptides in Litopenaeus vannamei

  • Cairé Barreto,
  • Jaqueline Da Rosa Coelho,
  • Jianbo Yuan,
  • Jianhai Xiang,
  • Luciane Maria Perazzolo and
  • Rafael Diego Rosa

16 January 2018

Crustins form a large family of antimicrobial peptides (AMPs) in crustaceans composed of four sub-groups (Types I-IV). Type II crustins (Type IIa or “Crustins” and Type IIb or “Crustin-like”) possess a typical hydrophobic N-terminal region and are by...

  • Article
  • Open Access
7 Citations
3,457 Views
21 Pages

3 December 2021

Probiotics are increasingly documented to confer health and performance benefits across farmed animals. The aim of this study was to assess the effect of a constant daily intake of the single-strain probiotic Pedicococcus acidilactici MA18/5M (4 &tim...

  • Review
  • Open Access
179 Citations
18,519 Views
39 Pages

Intensification of Penaeid Shrimp Culture: An Applied Review of Advances in Production Systems, Nutrition and Breeding

  • Maurício G. C. Emerenciano,
  • Artur N. Rombenso,
  • Felipe d. N. Vieira,
  • Mateus A. Martins,
  • Greg J. Coman,
  • Ha H. Truong,
  • Tansyn H. Noble and
  • Cedric J. Simon

19 January 2022

Intensification of the shrimp sector, also referred to as vertical expansion, has been predominately driven by consecutive incidences of global disease outbreaks, which have caused enormous economic loss for the main producer countries. A growing seg...

  • Review
  • Open Access
17 Citations
4,924 Views
19 Pages

RNAi-Based Therapy: Combating Shrimp Viral Diseases

  • Md. Shahanoor Alam,
  • Mohammad Nazrul Islam,
  • Mousumi Das,
  • Sk. Farzana Islam,
  • Md. Golam Rabbane,
  • Ehsanul Karim,
  • Animesh Roy,
  • Mohammad Shafiqul Alam,
  • Raju Ahmed and
  • Abu Syed Md. Kibria

5 October 2023

Shrimp aquaculture has become a vital industry, meeting the growing global demand for seafood. Shrimp viral diseases have posed significant challenges to the aquaculture industry, causing major economic losses worldwide. Conventional treatment method...

  • Article
  • Open Access
6 Citations
3,807 Views
17 Pages

Isolation and Characterization of Mannanase-Producing Bacteria for Potential Synbiotic Application in Shrimp Farming

  • Witida Sathitkowitchai,
  • Ponsit Sathapondecha,
  • Pacharaporn Angthong,
  • Yanee Srimarut,
  • Yuwares Malila,
  • Wuttichai Nakkongkam,
  • Sage Chaiyapechara,
  • Nitsara Karoonuthaisiri,
  • Suttipun Keawsompong and
  • Wanilada Rungrassamee

27 September 2022

Prebiotics such as mannan-oligosaccharides (MOS) are a promising approach to improve performance and disease resistance in shrimp. To improve prebiotic utilization, we investigated the potential probiotics and their feasibility of synbiotic use in vi...

  • Article
  • Open Access
4 Citations
2,452 Views
13 Pages

10 July 2023

Vibrio parahaemolyticus carrying plasmid encoding toxins PirA and PirB is one of the causative agents leading to the severe disease of AHPND in shrimp aquaculture. However, there is a lack of deep understanding of the host-resistant characteristics a...

  • Article
  • Open Access
3 Citations
3,074 Views
18 Pages

Whole-Body Toxic Metals and Morphometric Measurements in Brown Shrimp Penaeus aztecus in the Gulf of Mexico

  • María del Refugio Castañeda-Chávez,
  • Gabycarmen Navarrete-Rodríguez,
  • Armando T. Wakida-Kusunoki,
  • Ernesto Baruch-Garduza and
  • David Reynier-Valdés

19 October 2022

Fishing of the brown shrimp Penaeus aztecus is an important socioeconomic activity, generating income and different jobs for the fishing sector; however, this species is exposed to contaminants such as toxic metals. The objective of this research was...

  • Article
  • Open Access
27 Citations
11,409 Views
31 Pages

Non-Invasive Methods for Assessing the Welfare of Farmed White-Leg Shrimp (Penaeus vannamei)

  • Ana Silvia Pedrazzani,
  • Nathieli Cozer,
  • Murilo Henrique Quintiliano,
  • Camila Prestes dos Santos Tavares,
  • Ubiratã de Assis Teixeira da Silva and
  • Antonio Ostrensky

23 February 2023

Gradually, concern for the welfare of aquatic invertebrates produced on a commercial/industrial scale is crossing the boundaries of science and becoming a demand of other societal actors. The objective of this paper is to propose protocols for assess...

  • Review
  • Open Access
3 Citations
6,880 Views
17 Pages

Tropical Shrimp Biofloc Aquaculture within Greenhouses in the Mediterranean: Preconditions, Perspectives, and a Prototype Description

  • Dimitrios K. Papadopoulos,
  • Maria V. Alvanou,
  • Athanasios Lattos,
  • Kosmas Ouroulis and
  • Ioannis A. Giantsis

1 June 2024

Biofloc technology (BFT) offers an innovative eco-friendly approach that is particularly applicable in shrimp farming. Penaeus vannamei is the most important seafood species in terms of global economic value. Nevertheless, its increasing global deman...

  • Article
  • Open Access
3 Citations
2,184 Views
12 Pages

26 April 2024

Vibrio parahaemolyticus is one of the main causative agents leading to acute hepatopancreatic necrosis disease, the severe bacterial disease that occurs during shrimp aquaculture. Hemocytes play important roles during Vibrio infection. Previously, we...

  • Article
  • Open Access
59 Citations
12,240 Views
16 Pages

Exploring the Impact of the Biofloc Rearing System and an Oral WSSV Challenge on the Intestinal Bacteriome of Litopenaeus vannamei

  • Mariana R. Pilotto,
  • André N. A. Goncalves,
  • Felipe N. Vieira,
  • Walter Q. Seifert,
  • Evelyne Bachère,
  • Rafael D. Rosa and
  • Luciane M. Perazzolo

We provide a global overview of the intestinal bacteriome of Litopenaeus vannamei in two rearing systems and after an oral challenge by the White spot syndrome virus (WSSV). By using a high-throughput 16S rRNA gene sequencing technology, we identifie...

  • Article
  • Open Access
18 Citations
3,507 Views
17 Pages

The sesquiterpenoid methyl farnesoate (MF), a juvenile hormone (JH) analog, plays important roles in many physiological processes of crustaceans, such as morphogenesis, molting and reproduction. Juvenile hormone esterase-like (JHE-like) carboxylester...

  • Article
  • Open Access
1,400 Views
13 Pages

Environmental Variables Influencing the Distribution of Penaeus Shrimp (Decapoda: Dendrobranchiata: Penaeidae) in a Subtropical Estuary of the Gulf of Mexico

  • Ayla Marisol Ayala-Cruz,
  • Roberto Pérez-Castañeda,
  • Zeferino Blanco-Martínez,
  • Jesús Genaro Sánchez-Martínez,
  • María de la Luz Vázquez-Sauceda,
  • Flaviano Benavides-González and
  • Jaime Luis Rábago-Castro

17 March 2025

The habitat characteristics preferred by Penaeus shrimp inhabiting positive (freshwater-dominated) estuaries in North America have been scarcely investigated. Identifying the main environmental factors within the estuary that affect shrimp abundance...

  • Article
  • Open Access
11 Citations
6,198 Views
15 Pages

DNA Barcoding of Penaeidae (Decapoda; Crustacea): Non-Distance-Based Species Delimitation of the Most Economically Important Shrimp Family

  • Jorge L. Ramirez,
  • Luisa Simbine,
  • Carla G. Marques,
  • Eliana Zelada-Mázmela,
  • Lorenzo E. Reyes-Flores,
  • Adolfo S. López,
  • Jaqueline Gusmão,
  • Carolina Tavares,
  • Pedro M. Galetti and
  • Patricia D. Freitas

23 September 2021

The Penaeidae family includes some of the most economic and ecological important marine shrimp, comprising hundreds of species. Despite this importance and diversity, the taxonomic classification for penaeid shrimp has constantly been revised, and is...

  • Article
  • Open Access
5 Citations
4,156 Views
12 Pages

Penaeid shrimp aquaculture is impacted by various diseases. However, most published studies on physiological responses to pathogens have focused on the changes in one or two tissues of shrimp infected by a single pathogen, or the effects of two patho...

  • Article
  • Open Access
16 Citations
7,033 Views
23 Pages

Global mRNA and miRNA Analysis Reveal Key Processes in the Initial Response to Infection with WSSV in the Pacific Whiteleg Shrimp

  • Rebecca S. Millard,
  • Lisa K. Bickley,
  • Kelly S. Bateman,
  • Audrey Farbos,
  • Diana Minardi,
  • Karen Moore,
  • Stuart H. Ross,
  • Grant D. Stentiford,
  • Charles R. Tyler and
  • Eduarda M. Santos
  • + 1 author

13 June 2021

White Spot Disease (WSD) presents a major barrier to penaeid shrimp production. Mechanisms underlying White Spot Syndrome Virus (WSSV) susceptibility in penaeids are poorly understood due to limited information related to early infection. We investig...

  • Review
  • Open Access
10 Citations
4,890 Views
21 Pages

Genomics of Shrimp Allergens and Beyond

  • Shanshan Li,
  • Ka Hou Chu and
  • Christine Yee Yan Wai

27 November 2023

Allergy to shellfishes, including mollusks and crustaceans, is a growing health concern worldwide. Crustacean shellfish is one of the “Big Eight” allergens designated by the U.S. Food and Drug Administration and is the major cause of food...

  • Article
  • Open Access
4 Citations
2,887 Views
20 Pages

7 November 2022

Sterol regulatory element-binding proteins (SREBPs) play vital roles in fatty acid metabolism and other metabolic processes in mammals. However, in penaeid shrimp, the repertoire of genes modulated by SREBP is unknown. Here, RNA interference-mediated...

  • Article
  • Open Access
20 Citations
5,021 Views
20 Pages

16 July 2020

White Spot Syndrome Virus (WSSV) is one of the main threats to farming Litopenaeus vannamei, the most important crustacean commercialized in aquaculture worldwide. Here, we performed RNA-seq analyses in hepatopancreas and muscle from WSSV-negative (h...

  • Review
  • Open Access
39 Citations
8,789 Views
18 Pages

New Insights into the Mechanism of Action of PirAB from Vibrio Parahaemolyticus

  • Sonia A. Soto-Rodriguez,
  • Rodolfo Lozano-Olvera,
  • Gabriela Ramos-Clamont Montfort,
  • Edgar Zenteno,
  • José Luis Sánchez-Salgado,
  • Norberto Vibanco-Pérez and
  • Karla G. Aguilar Rendón

30 March 2022

PirAB toxins secreted by Vibrio parahaemolyticus (Vp) harbor the pVA1 virulence plasmid, which causes acute hepatopancreatic necrosis disease (AHPND), an emerging disease in Penaeid shrimp that can cause 70–100% mortality and that has resulted...

  • Feature Paper
  • Article
  • Open Access
10 Citations
5,440 Views
9 Pages

Gonadal Development of Females of the White Shrimp Penaeus schmitti (Burkenroad, 1936) Caught in Southeastern Brazil

  • Roberta Cardozo P. Garcia,
  • Cecília Fernanda F. Craveiro,
  • Caroline V. Bernabé,
  • Maria Aparecida Silva,
  • Paulo Henrique R. Aride,
  • Adriano T. Oliveira,
  • Flávia Regina S. C. Gonçalves,
  • Jones S. Neto,
  • Henrique D. Lavander and
  • Caterina Faggio

This study describes the reproductive cell development and ovarian developmental stages, and identifies the nongerminal components of white shrimp (Penaeus schmitti) caught off the southern coast of Espírito Santo, Brazil. P. schmitti specimens were...

  • Review
  • Open Access
24 Citations
15,769 Views
9 Pages

21 November 2022

White feces syndrome (WFS), a gastrointestinal disorder of cultivated penaeid shrimp, causes severe economic and production losses worldwide. Shrimp with WFS usually show a reduced feed consumption and growth rate, hepatopancreatic discoloration, and...

  • Review
  • Open Access
196 Citations
22,918 Views
28 Pages

Acute Hepatopancreatic Necrosis Disease (AHPND): Virulence, Pathogenesis and Mitigation Strategies in Shrimp Aquaculture

  • Vikash Kumar,
  • Suvra Roy,
  • Bijay Kumar Behera,
  • Peter Bossier and
  • Basanta Kumar Das

27 July 2021

Shrimp, as a high-protein animal food commodity, are one of the fastest growing food producing sectors in the world. It has emerged as a highly traded seafood product, currently exceeding 8 MT of high value. However, disease outbreaks, which are cons...

  • Article
  • Open Access
50 Citations
6,942 Views
14 Pages

PirABVP Toxin Binds to Epithelial Cells of the Digestive Tract and Produce Pathognomonic AHPND Lesions in Germ-Free Brine Shrimp

  • Vikash Kumar,
  • Lobke De Bels,
  • Liesbeth Couck,
  • Kartik Baruah,
  • Peter Bossier and
  • Wim Van den Broeck

9 December 2019

Acute hepatopancreatic necrosis disease (AHPND), a newly emergent farmed penaeid shrimp bacterial disease originally known as early mortality syndrome (EMS), is causing havoc in the shrimp industry. The causative agent of AHPND was found to be a spec...

  • Article
  • Open Access
3 Citations
2,246 Views
10 Pages

Pedigrees are essential components in selective breeding programs to manage genetic diversity and obtain accurate genetic parameter estimates to ensure long-term response to selection in captive populations. High throughput and cost-effective sequenc...

  • Article
  • Open Access
4 Citations
2,341 Views
18 Pages

Assessing Codend Mesh Selectivity: Comparing Diamond and Square Mesh Codend in the Red Sea Shrimp Trawl Fishery of Saudi Arabia

  • Ronald Grech Santucci,
  • Zafer Tosunoğlu,
  • Mehmet Cilbiz,
  • Santhosh Kumar Charles,
  • Sheeja Gireesh,
  • Sirajudheen Thayyil Kadengal,
  • Adel Mohamed S. Adam,
  • Eyüp Mümtaz Tıraşın,
  • Vahdet Ünal and
  • Mark Dimech

16 October 2024

This study assessed catch composition, size selectivity, and fishing efficiency of demersal trawls targeting penaeid shrimp species in the Red Sea. It first compared the currently used diamond mesh codends in two fishing areas, Al Qunfudhah and Jazan...

  • Article
  • Open Access
14 Citations
3,306 Views
12 Pages

9 October 2022

The emergence and spread of disease-causing viruses in shrimp aquaculture is not uncommon. Since 2016, unusual mortalities have been affecting the Brazilian shrimp industry and we have associated these unusual mortalities with a novel variant of infe...

  • Article
  • Open Access
503 Views
19 Pages

Identification of SNP Markers in the Glutamate Dehydrogenase (GDH) and Aspartate Aminotransferase 2 (AST2) Associated with Ammonia Nitrogen Tolerance in Penaeus monodon

  • Yangyang Ding,
  • Jinsong Chen,
  • Song Jiang,
  • Qibin Yang,
  • Yundong Li,
  • Jianhua Huang,
  • Lishi Yang,
  • Jianzhi Shi,
  • Yebing Yu and
  • Falin Zhou
  • + 1 author

31 October 2025

Black tiger shrimp (Penaeus monodon) is the largest species of penaeid, being commercially cultured globally, ranking as the second most farmed species in the shrimp industry. However, with the transformation of shrimp aquaculture from semi-intensive...

  • Article
  • Open Access
10 Citations
3,722 Views
7 Pages

Detection of Infectious Hypodermal and Hematopoietic Necrosis Virus (IHHNV, Decapod Penstylhamaparvovirus 1) in Commodity Red Claw Crayfish (Cherax quadricarinatus) Imported into South Korea

  • Chorong Lee,
  • Seong-Kyoon Choi,
  • Hye Jin Jeon,
  • Seung Ho Lee,
  • Young Kyoon Kim,
  • Song Park,
  • Jin-Kyu Park,
  • Se-Hyeon Han,
  • Seulgi Bae and
  • Jee Eun Han
  • + 1 author

Freshwater crayfish, which are cultivated in aquaculture, are economically important for food and ornamental purposes. However, relatively few studies have focused on potentially pathogenic viruses in crayfish compared to in penaeid shrimp. Commodity...

  • Article
  • Open Access
14 Citations
6,655 Views
22 Pages

Comparison of Immune Response of Litopenaeus vannamei Shrimp Naturally Infected with Vibrio Species, and after Being Fed with Florfenicol

  • Medhat S. Shakweer,
  • Gehad E. Elshopakey,
  • Abdelwahab A. Abdelwarith,
  • Elsayed M. Younis,
  • Simon John Davies and
  • Samia Elbahnaswy

2 March 2023

The outbreaks caused by Vibrio spp. are a notable threat to the potential growth of the economy of penaeid culture, which is still controlled by the administration of antibiotics. At first, the infected group was subjected to phenotypic bacteriologic...

  • Article
  • Open Access
36 Citations
6,622 Views
15 Pages

Structural Insights to the Heterotetrameric Interaction between the Vibrio parahaemolyticus PirAvp and PirBvp Toxins and Activation of the Cry-Like Pore-Forming Domain

  • Shin-Jen Lin,
  • Yi-Fan Chen,
  • Kai-Cheng Hsu,
  • Yun-Ling Chen,
  • Tzu-Ping Ko,
  • Chu-Fang Lo,
  • Han-Ching Wang and
  • Hao-Ching Wang

22 April 2019

Acute hepatopancreatic necrosis disease (AHPND) is a newly emergent penaeid shrimp disease which can cause 70–100% mortality in Penaeus vannamei and Penaeus monodon, and has resulted in enormous economic losses since its appearance. AHPND is ca...

  • Review
  • Open Access
25 Citations
6,815 Views
31 Pages

Marine Arthropods as a Source of Antimicrobial Peptides

  • Juan Pablo Saucedo-Vázquez,
  • Fernando Gushque,
  • Nelson Santiago Vispo,
  • Jenny Rodriguez,
  • Marco Esteban Gudiño-Gomezjurado,
  • Fernando Albericio,
  • Markus P. Tellkamp and
  • Frank Alexis

2 August 2022

Peptide therapeutics play a key role in the development of new medical treatments. The traditional focus on endogenous peptides has shifted from first discovering other natural sources of these molecules, to later synthesizing those with unique bioac...

  • Communication
  • Open Access
10 Citations
3,852 Views
9 Pages

28 May 2021

Tetraselmis subcordiformis, a unicellular marine green alga, is used widely in aquaculture as an initial feeding for fish, bivalve mollusks, penaeid shrimp larvae, and rotifers because of its rich content of amino acids and fatty acids. A stable nucl...

  • Article
  • Open Access
9 Citations
2,964 Views
13 Pages

Comparative Transcriptome Analysis Reveals That WSSV IE1 Protein Plays a Crucial Role in DNA Replication Control

  • Yixi Chen,
  • Gaochun Wu,
  • Chuanqi Wang,
  • Huimin Zhang,
  • Jinghua Zhu,
  • Yueling Zhang,
  • Zhongyang Lin and
  • Defu Yao

For DNA viruses, the immediate-early (IE) proteins are generally essential regulators that manipulate the host machinery to support viral replication. Recently, IE1, an IE protein encoded by white spot syndrome virus (WSSV), has been demonstrated to...

  • Brief Report
  • Open Access
27 Citations
6,557 Views
6 Pages

Quantification of Enterocytozoon hepatopenaei (EHP) in Penaeid Shrimps from Southeast Asia and Latin America Using TaqMan Probe-Based Quantitative PCR

  • Patharapol Piamsomboon,
  • Seong-Kyoon Choi,
  • Bambang Hanggono,
  • Yani Lestari Nuraini,
  • Fatma Wati,
  • Kathy F. J. Tang,
  • Song Park,
  • Dongmi Kwak,
  • Man Hee Rhee and
  • Ji Hyung Kim
  • + 1 author

12 November 2019

We developed a qPCR assay based on the β-tubulin gene sequence for the shrimp microsporidian parasite Enterocytozoon hepatopenaei (EHP). This assay reacted with the hepatopancreas (HP) of EHP-infected shrimps, and the highest copy numbers were f...

  • Article
  • Open Access
3 Citations
1,630 Views
14 Pages

A Comprehensive Assessment of the Nutritional Value, Antioxidant Potential, and Genetic Diversity of Fenneropenaeus merguiensis from Three Different Regions in China

  • Yundong Li,
  • Juan Chen,
  • Siyao Cao,
  • Ziyi Jiang,
  • Song Jiang,
  • Qibin Yang,
  • Lishi Yang,
  • Jianhua Huang,
  • Jianzhi Shi and
  • Falin Zhou
  • + 1 author

2 December 2024

Fenneropenaeus merguiensis is one of the largest species of penaeid shrimp. It has a wide distribution of germplasm resources in the South China Sea and the southeastern coastal regions of China, yet its germplasm characteristics remain insufficientl...

  • Article
  • Open Access
28 Citations
5,285 Views
18 Pages

28 January 2020

Severe and persistent bottom-water hypoxia (≤2 mg O2 L−1) occurs on the Louisiana/Texas continental shelf from mid-May through mid-September over a large area (up to 23,000 km2 in mid-summer). Benthic infauna are less mobile than demersal or...