Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (105)

Search Parameters:
Keywords = net carbon assimilation

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
19 pages, 2013 KB  
Article
Isobavachalcone Alleviates Plant Photosynthesis Inhibition Caused by Tobacco Mosaic Virus (TMV) Infection in Tobacco
by Lijie Guan, Yidan Wu, Wenli Sun, Mohamad Hesam Shahrajabian and Yuan Gao
Plants 2025, 14(23), 3638; https://doi.org/10.3390/plants14233638 - 28 Nov 2025
Viewed by 570
Abstract
Viral infection affects photosynthesis in plants, significantly reducing crop yield and quality. This study investigated the effects of isobavachalcone (IBC), a natural compound extracted from the plant Psoralea corylifolia L., on photosynthesis in tobacco under tobacco mosaic virus (TMV; species Tobamovirus tabaci, family [...] Read more.
Viral infection affects photosynthesis in plants, significantly reducing crop yield and quality. This study investigated the effects of isobavachalcone (IBC), a natural compound extracted from the plant Psoralea corylifolia L., on photosynthesis in tobacco under tobacco mosaic virus (TMV; species Tobamovirus tabaci, family Virgaviridae) stress. TMV infection significantly reduced the chlorophyll content, Rubisco activity, net photosynthetic rate (Pn), stomatal conductance (Gs), intercellular CO2 concentration (Ci), and transpiration rate (Tr) in tobacco leaves. However, exogenous application of IBC (40 mg/L) effectively alleviated the negative impacts of TMV. Compared with the inoculated control, IBC treatment increased the chlorophyll content by 16.00–100.68%, enhanced Rubisco activity by 3.72–115.84%, and improved Pn, Gs, Ci, and Tr by 155.65–347.65%, 89.43–408.00%, 17.51–56.18%, and 106.76–336.80%, respectively, at 3–9 days post inoculation (dpi). Tandem massed tag-based quantitative proteomics analysis revealed that IBC upregulated the abundance of photosynthesis-related proteins, including those involved in photosystem II, cytochrome b6/f complex, photosystem I, and ATP synthase, under TMV infection. GO and KEGG enrichment analyses further confirmed that IBC enhanced the expression of proteins associated with photosynthesis and energy production pathways. These findings suggest that IBC can mitigate TMV-induced photosynthesis inhibition by increasing photosynthetic pigment content, promoting carbon assimilation, and regulating photosynthesis-related proteins, providing new insights into the molecular mechanism of IBC-mediated plant protection. Full article
Show Figures

Figure 1

13 pages, 2064 KB  
Article
Comparative Study on Photosynthetic Characteristics and Leaf Structure of Paphiopedilum parishii in Different Growth Periods
by Li Lu, Haiying Jiang, Xinru Cai, Xi Li, Guohua He, Shuo Feng, Xiao Wei and Jianmin Tang
Agronomy 2025, 15(12), 2713; https://doi.org/10.3390/agronomy15122713 - 25 Nov 2025
Viewed by 361
Abstract
This study investigates the differences in photosynthetic characteristics of Paphiopedilum parishii (Rchb.f.) Stein during its reproductive and nutrient growth periods. Using plants from the same individual, we compared light response curves, chlorophyll content, leaf epidermal structure, and leaf anatomical structure between these two [...] Read more.
This study investigates the differences in photosynthetic characteristics of Paphiopedilum parishii (Rchb.f.) Stein during its reproductive and nutrient growth periods. Using plants from the same individual, we compared light response curves, chlorophyll content, leaf epidermal structure, and leaf anatomical structure between these two growth stages. The results show the following: (1) The overall shape of the light response curves was similar across both periods, but plants in the nutrient growth period exhibited higher net photosynthetic rates (Pn) at all light intensities compared to those in the reproductive growth period. (2) During the nutrient growth period, apparent quantum efficiency (AQY), maximum net photosynthetic rate (Pmax), and light saturation point (LSP) were all significantly higher than in the reproductive growth period, while the light compensation point (LCP) and dark respiration rate (Rd) showed no significant differences. (3) Structurally, during the nutrient growth period, stomatal density significantly increased, while stomatal area decreased. Additionally, leaf thickness and mesophyll tissue thickness both markedly increased, indicating enhanced carbon assimilation efficiency through improved CO2 uptake capacity and expanded photosynthetic area. (4) Significant differences in leaf anatomical structure between the two periods were primarily observed in leaf thickness and mesophyll tissue thickness, providing more space for energy accumulation during the post-flowering recovery phase. This study systematically reveals the dynamic changes in photosynthetic physiology and structural characteristics of P. parishii across different phenological stages, offering a theoretical foundation for its reintroduction and cultivation management. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
Show Figures

Figure 1

20 pages, 3516 KB  
Article
Supplementation with Mo, Co, and Ni Enhances the Effectiveness of Co-Inoculation with the Rhizobacteria Azospirillum brasilense and Bradyrhizobium diazoefficiens in Soybean
by Mateus Neri Oliveira Reis, Luciana Cristina Vitorino, Marialva Alvarenga Moreira, Alex Santos Macedo, Letícia Ferreira de Sousa, Lucas Loram Lourenço and Layara Alexandre Bessa
Microorganisms 2025, 13(12), 2680; https://doi.org/10.3390/microorganisms13122680 - 25 Nov 2025
Viewed by 487
Abstract
Efficient biological nitrogen fixation (BNF) is crucial for sustainable soybean productivity. Current strategies involve the use of Bradyrhizobium diazoefficiens and co-inoculation with plant growth-promoting bacteria like Azospirillum brasilense. To further optimize BNF and plant performance, we investigated the effect of co-inoculation with [...] Read more.
Efficient biological nitrogen fixation (BNF) is crucial for sustainable soybean productivity. Current strategies involve the use of Bradyrhizobium diazoefficiens and co-inoculation with plant growth-promoting bacteria like Azospirillum brasilense. To further optimize BNF and plant performance, we investigated the effect of co-inoculation with A. brasilense and B. diazoefficiens combined with the strategic application of the micronutrients Molybdenum (Mo), Cobalt (Co), and Nickel (Ni) on soybean grown under greenhouse conditions. We evaluated plant growth, photosynthetic parameters, accumulation of N, nitrate reductase activity, and nifH gene expression at the R1 reproductive stage. Our main finding was that the co-inoculation combined with the simultaneous application of Mo, Co, and Ni significantly maximized vegetative growth, photochemical efficiency, and BNF. Specifically, this triple supplementation increased nifH gene expression (0.22) compared to the inoculated control (0.003), leading to a substantial enhancement of photosynthetic parameters, including photosystem II (PSII) efficiency and net carbon assimilation (A). For example, the total dry mass was 14.36 g in the Mo + Co + Ni + AZO + BRADY combination and 6.50 g in the non-inoculated and non-micronutrient-treated plants. The total N content was also higher in the plants treated with Mo + Co + Ni + AZO + BRADY (73.20 g kg−1). Crucially, the data also demonstrated that excessive levels of Co impaired the symbiosis, underscoring the necessity of precise dose management. These results confirm the strong synergistic potential of combining microbial co-inoculation with targeted mineral nutrition as a high-impact, sustainable strategy for boosting soybean productivity. Full article
(This article belongs to the Special Issue Molecular Studies of Microorganisms in Plant Growth and Utilization)
Show Figures

Graphical abstract

17 pages, 4915 KB  
Article
Exogenous Hydrogen Sulfide Alleviates Low Temperature and Fluctuating-Light-Induced Photoinhibition of Photosystem I in Morus alba Through Enhanced Energy Dissipation and Antioxidant Defense
by Xiaowei Wei, Ju Zhang, Mingyue Sun and Nan Xu
Biology 2025, 14(11), 1582; https://doi.org/10.3390/biology14111582 - 12 Nov 2025
Viewed by 470
Abstract
Low temperature combined with fluctuating irradiance frequently co-occurs and suppresses photosynthesis, with irreversible injury to photosystem I (PSI) recognized as a key constraint on growth and yield. To test whether exogenous hydrogen sulfide (H2S) mitigates this “cold–fluctuating light” stress in mulberry, [...] Read more.
Low temperature combined with fluctuating irradiance frequently co-occurs and suppresses photosynthesis, with irreversible injury to photosystem I (PSI) recognized as a key constraint on growth and yield. To test whether exogenous hydrogen sulfide (H2S) mitigates this “cold–fluctuating light” stress in mulberry, we established six treatment combinations (room temperature controls, sodium hydrosulfide, and hypotaurine, each with or without low temperature plus fluctuating light). We quantified PSI/PSII photochemical properties, gas exchange, reactive oxygen species (ROS), and antioxidant enzyme activities. Under cold with fluctuating light, PSI was strongly inhibited: YNA increased, whereas YI and ΔI/Io decreased, and the P700 re-reduction half-time (t½) was prolonged (ANOVA, Tukey’s HSD, p < 0.05), indicating pronounced acceptor-side over-reduction and impaired electron transport. PSII performance also declined (lower Fv/Fm and PIABS, higher ΔVJ; p < 0.05). NaHS pretreatment significantly alleviated these effects relative to the stressed control: PSI/PSII metrics partly recovered, net photosynthetic rate (Pn) and water-use efficiency (WUE) increased, H2O2 and MDA decreased, and SOD/POD/CAT activities rose (p < 0.05). Notably, NPQhigh correlated negatively with YNA (Pearson r < 0, p < 0.001), consistent with the notion that enhanced energy dissipation relieves PSI acceptor-side limitation. We propose that exogenous H2S stabilizes electron transport and supports carbon assimilation via a dual strategy—faster engagement of energy dissipation and activation of antioxidant defenses—highlighting its potential utility for managing stress in fruit crops under erratic early-season weather. Full article
(This article belongs to the Special Issue Metals in Biology (2nd Edition))
Show Figures

Figure 1

16 pages, 2273 KB  
Article
Can Environmental Conditions Alter the Physiological and Photochemical Plasticity of Cacti (Opuntia and Nopalea) in Semiarid Environments?
by Lady Daiane Costa de Sousa Martins, Alexandre Maniçoba da Rosa Ferraz Jardim, Luciana Sandra Bastos de Souza, Lara Rosa de Lima e Silva, Wagner Martins dos Santos, Márcia Bruna Marim de Moura, Wilma Roberta dos Santos, Adriano Nascimento Simões, Sérgio Luiz Ferreira-Silva, Hugo Rafael Bentzen Santos, João L. M. P. de Lima and Thieres George Freire da Silva
Environments 2025, 12(11), 418; https://doi.org/10.3390/environments12110418 - 4 Nov 2025
Cited by 1 | Viewed by 921
Abstract
Cacti of the genera Opuntia and Nopalea exhibit morphophysiological and biochemical characteristics that favor their adaptation to semiarid environments, such as crassulacean acid metabolism (CAM) and cladode succulence. These strategies reduce water loss and allow the maintenance of photosynthesis under stress conditions. In [...] Read more.
Cacti of the genera Opuntia and Nopalea exhibit morphophysiological and biochemical characteristics that favor their adaptation to semiarid environments, such as crassulacean acid metabolism (CAM) and cladode succulence. These strategies reduce water loss and allow the maintenance of photosynthesis under stress conditions. In this study, we evaluated the seasonal variation in the physiological and photochemical responses of forage cactus clones grown in semiarid environments, considering the rainy, dry, and transition seasons. The net photosynthetic rate (Pn) and chlorophyll fluorescence parameters varied significantly as a function of water availability and microclimatic conditions. We found higher CO2 assimilation rates during the rainy season, while the dry season resulted in a strong impairment of photosynthetic activity, with reductions of 65% in stomatal conductance, 37% in transpiration, 20% in maximum quantum efficiency of photosystem II, and 19% in the electron transport rate. Furthermore, during these periods, we observed an increase in initial fluorescence and non-photochemical dissipation, demonstrating the activation of photoprotective mechanisms against excess light energy. During the transition seasons, the cacti exhibited rapid adjustments in gas exchange and energy dissipation, indicating the adaptive plasticity of CAM pathway. The MIU (Nopalea cochenillifera (L.) Salm-Dyck), OEM (Opuntia stricta (Haw.) Haw.), and IPA (Nopalea cochenillifera (L.) Salm-Dyck) clones demonstrated greater resilience, maintaining greater stability in Pn, instantaneous water use efficiency, and photochemical parameters during the drought. In contrast, the OEA (Opuntia undulata Griffiths) clone showed high sensitivity to water and heat stress, with marked reductions in physiological and photochemical performance. In summary, the photosynthetic efficiency and chlorophyll fluorescence of CAM plants result from the interaction between water availability, air temperature, radiation, and genotypic traits. This study provides a new scientific basis for exploring the effects of environmental conditions on the carbon and biochemical metabolism of cacti grown in a semiarid environment. Full article
Show Figures

Figure 1

21 pages, 8045 KB  
Article
Synergistic Interactions Between Leaf Traits and Photosynthetic Performance in Young Pinus tabuliformis and Robinia pseudoacacia Trees Under Drought and Shade
by Xinbing Yang, Chang Liu, Shaoning Li, Xiaotian Xu, Bin Li, Meng Tian, Shaowei Lu and Na Zhao
Plants 2025, 14(18), 2825; https://doi.org/10.3390/plants14182825 - 10 Sep 2025
Viewed by 981
Abstract
Spring droughts, increasingly coinciding with canopy shade, interactively stress the growth of urban tree species and are poorly understood in Beijing. Three-year-old saplings of Pinus tabuliformis and Robinia pseudoacacia were subjected to comparative analysis under four drought–shade sequences, with a full-light, well-watered treatment [...] Read more.
Spring droughts, increasingly coinciding with canopy shade, interactively stress the growth of urban tree species and are poorly understood in Beijing. Three-year-old saplings of Pinus tabuliformis and Robinia pseudoacacia were subjected to comparative analysis under four drought–shade sequences, with a full-light, well-watered treatment serving as the control. During two periods encompassing the drought to wilting point and subsequent rewatering, we assessed leaf morphology, water status, photosynthetic gas exchange, and chlorophyll fluorescence. Both species exhibited losses in leaf water and carbon assimilation under drought, yet their adaptive strategies substantially differed. P. tabuliformis conserved water through the stable leaf anatomy and conservative stomatal control. In particular, P. tabuliformis under full-light and drought conditions decreased their specific leaf area (SLA) by 23%, as well as showing reductions in stomatal conductance (Gs) and transpiration rate (Tr) along with the drought duration (p < 0.01). As the duration of post-drought rewatering increased, the reductions in the net photosynthetic rates (Pn) of P. tabulaeformis showed that the shade condition intensified its photosynthetic limitation and slowed recovery after drought. Under low-light drought, R. pseudoacacia exhibited a 52% increase in SLA and a 77% decline in Gs; the latter was markedly smaller than the reduction observed under full-light drought. After rewatering, Gs displayed an overcompensation response. The rise in specific leaf area and the greater flexibility of stomatal regulation partly offset the adverse effects of drought. Nevertheless, post-drought Pn recovered to only 40%, significantly lower than the 61% recovery under full-light drought. Moreover, the negative correlation between SLA and Pn became significantly stronger, indicating that the “after-effects” of shade–drought hindered photosynthetic recovery once the stress was relieved. Drought duration eroded the phenotypic performance in both species, while the light environment during drought and subsequent rehydration determined the time trajectory and completeness of recovery. These results validate a trade-off between shade mitigation and drought legacy, and guide species selection: plant shade-tolerant R. pseudoacacia in light-limited urban pockets and reserve sun-dependent P. tabuliformis for open, high-light sites to enhance drought resilience of Beijing’s urban forests. Full article
(This article belongs to the Special Issue Plant Stress Physiology and Molecular Biology (3rd Edition))
Show Figures

Graphical abstract

22 pages, 6792 KB  
Article
Silicon Accumulation and Photosynthetic Capacity of Dendrocalamus brandisii in Response to Sodium Silicate Foliar Application Across Vegetative Phenological Stages
by Yuntao Yang, Lei Huang, Lixia Yu, Fangwei Zhu, Ju Chang, Maobiao Li, Shuguang Wang, Changming Wang and Hui Zhan
Plants 2025, 14(17), 2624; https://doi.org/10.3390/plants14172624 - 23 Aug 2025
Cited by 2 | Viewed by 873
Abstract
Silicon plays a positive role in plant growth and physiological activities; however, silicon fertilizer application in bamboo remains limited. This study explored the silicon accumulation and photosynthetic capacity of Dendrocalamus brandisii in response to sodium silicate (SS) foliar application across vegetative phenological stages. [...] Read more.
Silicon plays a positive role in plant growth and physiological activities; however, silicon fertilizer application in bamboo remains limited. This study explored the silicon accumulation and photosynthetic capacity of Dendrocalamus brandisii in response to sodium silicate (SS) foliar application across vegetative phenological stages. The results showed that August (shooting stage) and May (branching and leafing stage) were the critical periods for silicon accumulation. SS significantly enhanced the net photosynthetic rate (Pn), chlorophyll content, and photosystem activity (Fv/Fm, Fv′/Fm′), particularly in August and May. Correlation analysis revealed that silicon content was significantly positively correlated with photosynthetic parameters (Pn, chlorophyll a/b) and photoassimilate accumulation (soluble sugar, starch), confirming that silicon optimized leaf light capture and carbon assimilation capacity by promoting phytolith formation. This research provides a theoretical foundation for the application of silicon fertilizers in bamboo forest cultivation. Full article
(This article belongs to the Section Plant Nutrition)
Show Figures

Figure 1

20 pages, 4436 KB  
Article
Elimination of Intraspecific Competition Does Not Improve Maize Leaf Physiological and Biochemical Responses to Topsoil Degradation
by Shan Zhang, Xiaolong Zhang, Zechen Jia, Kaichang Liu, Zhongxiao Guo, Yanjie Lv and Yongjun Wang
Plants 2025, 14(16), 2470; https://doi.org/10.3390/plants14162470 - 9 Aug 2025
Viewed by 654
Abstract
Soil degradation limits maize grain yield, but the mechanisms by which leaf functions respond to topsoil depth and their contributions to yield are unclear. We quantified the response mechanisms of leaf functions to topsoil depth with topsoil depths of 10 cm (S1 [...] Read more.
Soil degradation limits maize grain yield, but the mechanisms by which leaf functions respond to topsoil depth and their contributions to yield are unclear. We quantified the response mechanisms of leaf functions to topsoil depth with topsoil depths of 10 cm (S1), 20 cm (S2), 30 cm (S3), 40 cm (S4), and 50 cm (S5) and planting densities of 15,000 plants ha−1 (D1, the plant spacing was 111.1 cm and there was no mutual influence between individuals) and 75,000 plants ha−1 (D2). The grain yield in S1 was significantly lower than that in S2, S3, S4, and S5, and the maximum reductions in yield were 39.7% in D1 and 39.1% in D2. The coefficients of variation for yield in S1 and S2 were significantly higher than those in S3, S4, and S5 at both densities and in both years. The net assimilation rate and production efficiency of leaf area, as well as leaf nitrogen and carbon accumulation, all decreased with decreasing topsoil depth. The decreasing topsoil depth significantly reduced the maize leaf net photosynthetic rate, activities of key nitrogen metabolism enzymes, and photosynthesis. Therefore, eliminating intraspecific competition did not reduce the yield loss caused by a reduction in topsoil because leaf nitrogen metabolism and photosynthetic processes were severely limited by the decrease in topsoil depth. Full article
Show Figures

Figure 1

24 pages, 7063 KB  
Article
An Improved InTEC Model for Estimating the Carbon Budgets in Eucalyptus Plantations
by Zhipeng Li, Mingxing Zhou, Kunfa Luo, Yunzhong Wu and Dengqiu Li
Remote Sens. 2025, 17(15), 2741; https://doi.org/10.3390/rs17152741 - 7 Aug 2025
Viewed by 752
Abstract
Eucalyptus has become a major plantation crop in southern China, with a carbon sequestration capacity significantly higher than that of other species. However, its long-term carbon sequestration capacity and regional-scale potential remain highly uncertain due to commonly applied short-rotation management practices. The InTEC [...] Read more.
Eucalyptus has become a major plantation crop in southern China, with a carbon sequestration capacity significantly higher than that of other species. However, its long-term carbon sequestration capacity and regional-scale potential remain highly uncertain due to commonly applied short-rotation management practices. The InTEC (Integrated Terrestrial Ecosystem Carbon) model is a process-based biogeochemical model that simulates carbon dynamics in terrestrial ecosystems by integrating physiological processes, environmental drivers, and management practices. In this study, the InTEC model was enhanced with an optimized eucalyptus module (InTECeuc) and a data assimilation module (InTECDA), and driven by multiple remote sensing products (Net Primary Productivity (NPP) and carbon density) to simulate the carbon budgets of eucalyptus plantations from 2003 to 2023. The results indicated notable improvements in the performance of the InTECeuc model when driven by different datasets: carbon density simulation showed improvements in R2 (0.07–0.56), reductions in MAE (5.99–28.51 Mg C ha−1), reductions in RMSE (8.1–31.85 Mg C ha−1), and improvements in rRMSE (12.37–51.82%), excluding NPPLin. The carbon density-driven InTECeuc model outperformed the NPP-driven model, with improvements in R2 (0.28), MAE (−8.15 Mg C ha−1), RMSE (−9.43 Mg C ha−1), and rRMSE (−15.34%). When the InTECDA model was employed, R2 values for carbon density improved by 0–0.03 (excluding ACDYan), with MAE reductions between 0.17 and 7.22 Mg C ha−1, RMSE reductions between 0.33 and 12.94 Mg C ha−1 and rRMSE improvements ranging from 0.51 to 20.22%. The carbon density-driven InTECDA model enabled the production of high-resolution and accurate carbon budget estimates for eucalyptus plantations from 2003 to 2023, with average NPP, Net Ecosystem Productivity (NEP), and Net Biome Productivity (NBP) values of 17.80, 10.09, and 9.32 Mg C ha−1 yr−1, respectively, offering scientific insights and technical support for the management of eucalyptus plantations in alignment with carbon neutrality targets. Full article
Show Figures

Figure 1

32 pages, 6657 KB  
Article
Mechanisms of Ocean Acidification in Massachusetts Bay: Insights from Modeling and Observations
by Lu Wang, Changsheng Chen, Joseph Salisbury, Siqi Li, Robert C. Beardsley and Jackie Motyka
Remote Sens. 2025, 17(15), 2651; https://doi.org/10.3390/rs17152651 - 31 Jul 2025
Viewed by 1109
Abstract
Massachusetts Bay in the northeastern United States is highly vulnerable to ocean acidification (OA) due to reduced buffering capacity from significant freshwater inputs. We hypothesize that acidification varies across temporal and spatial scales, with short-term variability driven by seasonal biological respiration, precipitation–evaporation balance, [...] Read more.
Massachusetts Bay in the northeastern United States is highly vulnerable to ocean acidification (OA) due to reduced buffering capacity from significant freshwater inputs. We hypothesize that acidification varies across temporal and spatial scales, with short-term variability driven by seasonal biological respiration, precipitation–evaporation balance, and river discharge, and long-term changes linked to global warming and river flux shifts. These patterns arise from complex nonlinear interactions between physical and biogeochemical processes. To investigate OA variability, we applied the Northeast Biogeochemistry and Ecosystem Model (NeBEM), a fully coupled three-dimensional physical–biogeochemical system, to Massachusetts Bay and Boston Harbor. Numerical simulation was performed for 2016. Assimilating satellite-derived sea surface temperature and sea surface height improved NeBEM’s ability to reproduce observed seasonal and spatial variability in stratification, mixing, and circulation. The model accurately simulated seasonal changes in nutrients, chlorophyll-a, dissolved oxygen, and pH. The model results suggest that nearshore areas were consistently more susceptible to OA, especially during winter and spring. Mechanistic analysis revealed contrasting processes between shallow inner and deeper outer bay waters. In the inner bay, partial pressure of pCO2 (pCO2) and aragonite saturation (Ωa) were influenced by sea temperature, dissolved inorganic carbon (DIC), and total alkalinity (TA). TA variability was driven by nitrification and denitrification, while DIC was shaped by advection and net community production (NCP). In the outer bay, pCO2 was controlled by temperature and DIC, and Ωa was primarily determined by DIC variability. TA changes were linked to NCP and nitrification–denitrification, with DIC also influenced by air–sea gas exchange. Full article
Show Figures

Figure 1

10 pages, 558 KB  
Communication
Carbon Sink Potential of Sulfur-Oxidizing Bacteria in Groundwater at Petroleum-Contaminated Sites
by Pingping Cai, Zhuo Ning and Min Zhang
Microorganisms 2025, 13(7), 1688; https://doi.org/10.3390/microorganisms13071688 - 18 Jul 2025
Viewed by 769
Abstract
Groundwater at petroleum-contaminated sites typically exhibits elevated dissolved inorganic carbon (DIC) levels due to hydrocarbon biodegradation; however, our prior field investigations revealed an enigmatic DIC depletion anomaly that starkly contradicts this global pattern and points to an unrecognized carbon sink. In a breakthrough [...] Read more.
Groundwater at petroleum-contaminated sites typically exhibits elevated dissolved inorganic carbon (DIC) levels due to hydrocarbon biodegradation; however, our prior field investigations revealed an enigmatic DIC depletion anomaly that starkly contradicts this global pattern and points to an unrecognized carbon sink. In a breakthrough demonstration, this study provides the first experimental confirmation that sulfur-oxidizing bacteria (SOB) drive substantial carbon sequestration via a coupled sulfur oxidation autotrophic assimilation process. Through integrated hydrochemical monitoring and 16S rRNA sequencing in an enrichment culture system, we captured the complete DIC transformation trajectory: heterotrophic acetate degradation initially increased DIC to 370 mg/L, but subsequent autotrophic assimilation by SOB dramatically reduced DIC to 270 mg/L, yielding a net consumption of 85 mg/L. The distinctive pH dynamics (initial alkalization followed by acidification) further corroborated microbial regulation of carbon cycling. Critically, Pseudomonas stutzeri and P. alcaliphila were identified as the dominant carbon-fixing agents. These findings definitively establish that chemolithoautotrophic SOB convert DIC into organic carbon through a “sulfur oxidation-carbon fixation” coupling mechanism, overturning the conventional paradigm of petroleum-contaminated sites as perpetual carbon sources. The study fundamentally redefines natural attenuation frameworks by introducing microbial carbon sink potential as an essential assessment metric for environmental sustainability. Full article
(This article belongs to the Section Environmental Microbiology)
Show Figures

Figure 1

19 pages, 26828 KB  
Article
Synergistic Effects of Elevated CO2 and Enhanced Light Intensity on Growth Dynamics, Stomatal Phenomics, Leaf Anatomy, and Photosynthetic Performance in Tomato Seedlings
by Tonghua Pan, Wenya Zhang, Wentao Du, Bingyan Fu, Xiaoting Zhou, Kai Cao, Encai Bao, Yunlong Wang and Gaoqiang Lv
Horticulturae 2025, 11(7), 760; https://doi.org/10.3390/horticulturae11070760 - 1 Jul 2025
Cited by 1 | Viewed by 1311
Abstract
Elevated [CO2] enhances light interception and carboxylation efficiency in plants. The combined effects of [CO2] and photosynthetic photon flux density (PPFD) on stomatal morphology, leaf anatomy, and photosynthetic capacity in tomato seedlings remain unclear. This study subjected tomato seedlings [...] Read more.
Elevated [CO2] enhances light interception and carboxylation efficiency in plants. The combined effects of [CO2] and photosynthetic photon flux density (PPFD) on stomatal morphology, leaf anatomy, and photosynthetic capacity in tomato seedlings remain unclear. This study subjected tomato seedlings (Solanum lycopersicum Mill. cv. Jingpeng No.1) to two [CO2] (ambient [a[CO2], 400 µmol·mol−1] and enriched [e[CO2], 800 µmol·mol−1]) and three PPFD levels (L; low[Ll: 200 µmol·m−2·s−1], moderate[Lm: 300 µmol·m−2·s−1], and high[Lh: 400 µmol·m−2·s−1]) to assess their interactive impacts. Results showed that e[CO2] and increased PPFD synergistically improved relative growth rate and net assimilation rate while reducing specific leaf area and leaf area ratio. Notably, e[CO2] decreased stomatal aperture (−13.81%) and density (−27.76%), whereas elevated PPFD promoted stomatal morphological adjustments. Additionally, Leaf thickness increased by 72.98% under e[CO2], with Lm and Lh enhancing this by 10.79% and 41.50% compared to Ll. Furthermore, photosynthetic performance under e[CO2] was further evidenced by improved chlorophyll fluorescence parameters (excluding non-photochemical quenching). While both e[CO2] and increased PPFD Photosynthetic performance under e[CO2] was further evidenced by improved chlorophyll fluorescence parameters (excluding non-photochemical quenching). Moreover, e[CO2]-Lh treatment maximized total dry mass and seedling health index. Correlation analysis indicated that synergistic optimization of stomatal traits and leaf structure under a combination of e[CO2] and increased PPFD enhanced light harvesting and CO2 diffusion, thereby promoting carbon assimilation. These findings highlight e[CO2]-Lh as an optimal strategy for tomato seedling growth, providing empirical guidance for precision CO2 fertilization and light management in controlled cultivation. Full article
(This article belongs to the Special Issue Latest Advances in Horticulture Production Equipment and Technology)
Show Figures

Figure 1

18 pages, 2410 KB  
Article
Contribution of Roots and Shoots of Three Summer Cover Crops to Soil C and N Cycling Post-Termination
by Dorna Saadat, Masoud Hashemi, Stephen Herbert and Artie Siller
Agronomy 2025, 15(6), 1467; https://doi.org/10.3390/agronomy15061467 - 16 Jun 2025
Cited by 2 | Viewed by 1507
Abstract
Although summer cover crops (CCs) have relatively short growing periods, they can significantly enhance soil health by contributing to carbon (C) and nitrogen (N) cycling. Three summer CCs—including oat, buckwheat, and pea—were planted in June–July and evaluated for their biomass, allocation of assimilates [...] Read more.
Although summer cover crops (CCs) have relatively short growing periods, they can significantly enhance soil health by contributing to carbon (C) and nitrogen (N) cycling. Three summer CCs—including oat, buckwheat, and pea—were planted in June–July and evaluated for their biomass, allocation of assimilates to roots, C and N yield, and residue decomposition patterns after termination in a 14-week period. Total biomass (roots + shoots) was highest in buckwheat (5822 kg ha−1), followed by oat (4836 kg ha−1) and then pea (20 22 kg ha−1). Across species, the allocation of assimilates to roots decreased from 34% at 30 days after planting to 18% at termination. Total C yield was 2409, 1941, and 808 kg ha−1 for buckwheat, oat, and pea, respectively, with root C content considerably lower than shoot C content. The initial carbon-to-nitrogen (C:N) ratios in the roots and shoots of pea were substantially lowest among the species and remained below the 25:1 threshold, indicating potential for net N mineralization. In contrast, oat and buckwheat exhibited initial C:N of 40–50 in roots and around 30 in shoots. These ratios shifted during decomposition. After a 14-week decomposition period, all CCs had released over 50% of their root and shoot biomass. However, the release of their C and N did not directly align with biomass decay. Approximately 70% of the C in roots and shoots of oats and buckwheat remained unreleased after 14 weeks. The slow N release from oat and buckwheat residues suggests potential N immobilization, which could lead to nitrogen deficiency in subsequent crops. Full article
Show Figures

Figure 1

14 pages, 4598 KB  
Article
Optimized Sugar Beet Seedling Growth via Coordinated Photosynthate Allocation and N Assimilation Regulation
by Kehua Chen, Mingyue Chu, Qing Bai, Lingqing Xu, Yuanhang Zhou, Xiaodong Li, Hao Wang, Wang Xing and Dali Liu
Agriculture 2025, 15(12), 1273; https://doi.org/10.3390/agriculture15121273 - 12 Jun 2025
Viewed by 1312
Abstract
Sugar beet is a nitrogen (N)-sensitive crop, and its N regulation and utilization are critical for enhancing productivity. Sugar beet seedlings at the two-true-leaf-pair stage were hydroponically grown in an artificial climate chamber. Leaves and roots from three seedlings per treatment were sampled [...] Read more.
Sugar beet is a nitrogen (N)-sensitive crop, and its N regulation and utilization are critical for enhancing productivity. Sugar beet seedlings at the two-true-leaf-pair stage were hydroponically grown in an artificial climate chamber. Leaves and roots from three seedlings per treatment were sampled at 10, 20, 25, and 30 days after exposure to N treatments (N5: 5 mmol/L, N10: 10 mmol/L, N15: 15 mmol/L, and N20: 20 mmol/L) to assess the effects of N supply level on growth, photosynthesis, and carbon and nitrogen metabolism. The results revealed a time-dependent dynamics in beet biomass accumulation, with N20 inducing chlorosis and necrosis symptoms by 10 days post-treatment (DPT), resulting in the lowest biomass. While N15 significantly promoted root biomass by 30 DPT, showing a 23.70% (root dry weight, RDW) increase over N20; chlorophyll content and gas exchange parameters-net photosynthetic rate (Pn), stomatal conductance (Gs), transpiration rate (Tr) exhibited significant N dependence, with N15 maintaining high chlorophyll level (0.78 mg/g) and photosynthetic rate (220.33 μmol/(m2·s). Nitrogen assimilation, as indicated by glutamine synthetase and glutamate synthetase activity (GS and GOGAT), was stronger under N15, promoting amino acid synthesis and root growth, whereas N20 inhibited enzyme activity. Carbon metabolism analysis revealed that N15-driven sucrose synthesis significantly increased root sucrose content, sucrose phosphate synthase and sucrose synthase activity (SPS and SS), optimizing source–sink allocation. Correlation analysis showed a positive relationship between leaf and root biomass (r = 0.91), and root sucrose content was positively correlated with GOGAT activity (r = 0.90), emphasizing the synergistic regulation of C/N metabolism. On the contrary, N20 led to disrupted C/N metabolic homeostasis, inhibited enzyme activity, and C/N distribution. These results indicated that the photosynthetic output, enzyme efficiency, and sucrose distribution were coordinated by nitrogen optimization, and the growth of sugar beet seedlings was optimized. Full article
Show Figures

Figure 1

23 pages, 3459 KB  
Article
Synergistic Effects of Trichoderma harzianum and Light Quality on Photosynthetic Carbon Metabolism and Growth in Tomato Plants
by Ningyu Wang, Qihui Xu, Congrui Qin, Lijiahong Geng, Zhenglin Yan, Haolong Li, Golam Jalal Ahammed and Shuangchen Chen
Agronomy 2025, 15(6), 1362; https://doi.org/10.3390/agronomy15061362 - 31 May 2025
Cited by 3 | Viewed by 1948
Abstract
The genus Trichoderma comprises a group of fungi known for their beneficial effects on plant growth and stress tolerance. Light is a key environmental factor affecting many plant physiological processes. However, a significant research gap remains regarding the interaction between light quality and [...] Read more.
The genus Trichoderma comprises a group of fungi known for their beneficial effects on plant growth and stress tolerance. Light is a key environmental factor affecting many plant physiological processes. However, a significant research gap remains regarding the interaction between light quality and Trichoderma harzianum inoculation, particularly their combined effects on tomato plant growth and photosynthetic efficiency. Here, we showed that T. harzianum inoculation effectively alleviated the growth inhibition caused by monochromatic red light or blue light in tomato plants. Combined red and blue light treatment with T. harzianum inoculation (RBT) promoted root development by regulating the rational distribution of carbon assimilation products. Specifically, the RBT treatment upregulated the expression of photosynthesis-related genes, including key Calvin cycle enzyme genes such as FBPase, FBPA, TPI, and SBPase, as well as the light signal transduction factor HY5. In addition, T. harzianum inoculation increased the maximal photochemical efficiency of PSII (Fv/Fm), and the net photosynthetic rate (Pn). The activity of sucrose synthetase (SS) and sucrose phosphate synthetase (SPS) was also enhanced, promoting photosynthetic product accumulation in leaves and roots. Among all treatment groups, RBT performed the best in the above indexes. Full article
Show Figures

Figure 1

Back to TopTop