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Keywords = long-term adaptation to cold

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25 pages, 1668 KiB  
Article
The Impact of Climate Change on the Sustainability of PGI Legume Cultivation: A Case Study from Spain
by Betty Carlini, Javier Velázquez, Derya Gülçin, Víctor Rincón, Cristina Lucini and Kerim Çiçek
Agriculture 2025, 15(15), 1628; https://doi.org/10.3390/agriculture15151628 - 27 Jul 2025
Viewed by 168
Abstract
Legume crops are sensitive to shifting environmental conditions, as they depend on a narrow range of climatic stability for growth and nitrogen fixation. This research sought to assess the sustainability of Faba Asturiana (FA) cultivation under current and future climatic scenarios by establishing [...] Read more.
Legume crops are sensitive to shifting environmental conditions, as they depend on a narrow range of climatic stability for growth and nitrogen fixation. This research sought to assess the sustainability of Faba Asturiana (FA) cultivation under current and future climatic scenarios by establishing generalized linear mixed models (GLMMs). Specifically, it aimed to (1) investigate the effects of significant climatic stressors, including higher nighttime temperatures and extended drought periods, on crop viability, (2) analyze future scenarios based on Representative Concentration Pathways (RCP 4.5 and RCP 8.5), and (3) recommend adaptive measures to mitigate threats. Six spatial GLMMs were developed, incorporating variables such as extreme temperatures, precipitation, and the drought duration. Under present-day conditions (1971–2000), all the models exhibited strong predictive performances (AUC: 0.840–0.887), with warm nights (tasminNa20) consistently showing a negative effect on suitability (coefficients: −0.58 to −1.16). Suitability projections under future climate scenarios revealed considerable variation among the developed models. Under RCP 4.5, Far Future, Model 1 projected a 7.9% increase in the mean suitability, while under RCP 8.5, Far Future, the same model showed a 78% decline. Models using extreme cold, drought, or precipitation as climatic stressors (e.g., Models 2–4) revealed the most significant suitability losses under RCP 8.5, with the reductions exceeding 90%. In contrast, comprising variables less affected by severe fluctuations, Model 6 showed relative stability in most of the developed scenarios. The model also produced the highest mean suitability (0.130 ± 0.207) in an extreme projective scenario. The results highlight that high night temperatures and prolonged drought periods are the most limiting factors for FA cultivation. ecological niche models (ENMs) performed well, with a mean AUC value of 0.991 (SD = 0.006) and a mean TSS of 0.963 (SD = 0.024). According to the modeling results, among the variables affecting the current distribution of Protected Geographical Indication-registered AF, prspellb1 (max consecutive dry days) had the highest effect of 28.3%. Applying advanced statistical analyses, this study provides important insights for policymakers and farmers, contributing to the long-term sustainability of PGI agroecosystems in a warming world. Full article
(This article belongs to the Special Issue Sustainable Management of Legume Crops)
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23 pages, 5108 KiB  
Review
The Invasive Mechanism and Impact of Arundo donax, One of the World’s 100 Worst Invasive Alien Species
by Hisashi Kato-Noguchi and Midori Kato
Plants 2025, 14(14), 2175; https://doi.org/10.3390/plants14142175 - 14 Jul 2025
Viewed by 338
Abstract
Arundo donax L. has been introduced in markets worldwide due to its economic value. However, it is listed in the world’s 100 worst alien invasive species because it easily escapes from cultivation, and forms dense monospecific stands in riparian areas, agricultural areas, and [...] Read more.
Arundo donax L. has been introduced in markets worldwide due to its economic value. However, it is listed in the world’s 100 worst alien invasive species because it easily escapes from cultivation, and forms dense monospecific stands in riparian areas, agricultural areas, and grassland areas along roadsides, including in protected areas. This species grows rapidly and produces large amounts of biomass due to its high photosynthetic ability. It spreads asexually through ramets, in addition to stem and rhizome fragments. Wildfires, flooding, and human activity promote its distribution and domination. It can adapt to various habitats and tolerate various adverse environmental conditions, such as cold temperatures, drought, flooding, and high salinity. A. donax exhibits defense mechanisms against biotic stressors, including herbivores and pathogens. It produces indole alkaloids, such as bufotenidine and gramine, as well as other alkaloids that are toxic to herbivorous mammals, insects, parasitic nematodes, and pathogenic fungi and oomycetes. A. donax accumulates high concentrations of phytoliths, which also protect against pathogen infection and herbivory. Only a few herbivores and pathogens have been reported to significantly damage A. donax growth and populations. Additionally, A. donax exhibits allelopathic activity against competing plant species, though the allelochemicals involved have yet to be identified. These characteristics may contribute to its infestation, survival, and population expansion in new habitats as an invasive plant species. Dense monospecific stands of A. donax alter ecosystem structures and functions. These stands impact abiotic processes in ecosystems by reducing water availability, and increasing the risk of erosion, flooding, and intense fires. The stands also negatively affect biotic processes by reducing plant diversity and richness, as well as the fitness of habitats for invertebrates and vertebrates. Eradicating A. donax from a habitat requires an ongoing, long-term integrated management approach based on an understanding of its invasive mechanisms. Human activity has also contributed to the spread of A. donax populations. There is an urgent need to address its invasive traits. This is the first review focusing on the invasive mechanisms of this plant in terms of adaptation to abiotic and biotic stressors, particularly physiological adaptation. Full article
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15 pages, 1642 KiB  
Review
Molecular Mechanisms of Plant Stress Memory: Roles of Non-Coding RNAs and Alternative Splicing
by Mariz Sintaha
Plants 2025, 14(13), 2021; https://doi.org/10.3390/plants14132021 - 2 Jul 2025
Cited by 1 | Viewed by 531
Abstract
The ability of plants to protect themselves from stress-related damages is termed “adaptability” and the phenomenon of showing better performance in subsequent stress is termed “stress memory”. This phenomenon has been reported in various stresses such as drought, heat, salinity, cold, and heavy [...] Read more.
The ability of plants to protect themselves from stress-related damages is termed “adaptability” and the phenomenon of showing better performance in subsequent stress is termed “stress memory”. This phenomenon has been reported in various stresses such as drought, heat, salinity, cold, and heavy metal toxicity. Histone modification leading to chromatin remodeling and accumulation of phosphorylated RNA polymerase on the promoters of memory genes is a well-known mechanism of plant stress memory. Recent studies have revealed the role of non-coding RNAs (ncRNAs) and alternative splicing (AS) in memory-specific gene expression and transgenerational inheritance of stress memory. MicroRNAs (miRNAs) inhibit specific genes to enable plants to respond better in subsequent drought and heat stress, while long non-coding RNAs (lncRNAs) play roles in epigenetic regulation of memory gene expression in cold and salt stress. Small interfering RNAs (siRNAs) lead to DNA methylation during the memory response of biotic, salt, and heavy metal stress. Simultaneously, stress-responsive isoforms of tolerant genes are found to be expressed as a memory response in subsequent heat stress. This review highlights the stress-type-specific roles of ncRNAs and AS in establishing, maintaining, and transmitting stress memory, offering insights into their potential for improving crop resilience through genetic and epigenetic priming strategies. Full article
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27 pages, 5501 KiB  
Article
The Influence of Thermal History and Air Conditioner Use Behavior Under Different Cooling Set Point Temperature Modes on Health
by Fangning Shi, Nianping Li and Haiyan Yan
Buildings 2025, 15(13), 2211; https://doi.org/10.3390/buildings15132211 - 24 Jun 2025
Viewed by 450
Abstract
Chinese local governments mandate public buildings to maintain a cooling set point temperature (SPT ≥ 26 °C). To explore how thermal history and air conditioner use behavior under different cooling SPT modes influence health, an experimental study and field investigation was carried out [...] Read more.
Chinese local governments mandate public buildings to maintain a cooling set point temperature (SPT ≥ 26 °C). To explore how thermal history and air conditioner use behavior under different cooling SPT modes influence health, an experimental study and field investigation was carried out in split air-conditioned office buildings in China’s cold climate regions. Two categories were established based on energy policy: the H group (SPT ≥ 26 °C) and the L group (SPT < 26 °C). The results showed that L group subjects experienced longer, colder, and higher CO2/formaldehyde exceedance rate exposures in air-conditioned environments, demonstrating greater reliance on air conditioners, although indoor air quality satisfaction showed no significant difference between groups. Air quality perception demonstrates long-term adaptation to indoor air temperature and CO2. Compared with the high SPT mode, the adverse influences and mechanisms of the low SPT mode on health are as follows: making people adapt to cold environments due to colder thermal history and inducing pathological adaptation cycles, thus promoting strong reliance on the air-conditioned environment. This leads to a substantial increase in air conditioner use time, thereby increasing the severity of sick building syndrome (SBS), indoor pollutants, formaldehyde carcinogenic risk, and desensitized air quality perception. China’s government should systematically enhance the enforcement of SPT-related policies. Full article
(This article belongs to the Section Building Energy, Physics, Environment, and Systems)
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29 pages, 1602 KiB  
Article
A Recommender System Model for Presentation Advisor Application Based on Multi-Tower Neural Network and Utility-Based Scoring
by Maria Vlahova-Takova and Milena Lazarova
Electronics 2025, 14(13), 2528; https://doi.org/10.3390/electronics14132528 - 22 Jun 2025
Viewed by 650
Abstract
Delivering compelling presentations is a critical skill across academic, professional, and public domains—yet many presenters struggle with structuring content, maintaining visual consistency, and engaging their audience effectively. Existing tools offer isolated support for design or delivery but fail to promote long-term skill development. [...] Read more.
Delivering compelling presentations is a critical skill across academic, professional, and public domains—yet many presenters struggle with structuring content, maintaining visual consistency, and engaging their audience effectively. Existing tools offer isolated support for design or delivery but fail to promote long-term skill development. This paper presents a novel intelligent application, the Presentation Advisor application, powered by a personalized recommendation engine that goes beyond fixing slide content and visualization, enabling users to build presentation competence. The recommendation engine leverages a model based on hybrid multi-tower neural network architecture enhanced with temporal encoding, problem sequence modeling, and utility-based scoring to deliver adaptive context-aware feedback. Unlike current tools, the presented system analyzes user-submitted presentations to detect common issues and delivers curated educational content tailored to user preferences, presentation types, and audiences. The system also incorporates strategic cold-start mitigation, ensuring high-quality recommendations even for new users or unseen content. Comprehensive experimental evaluations demonstrate that the suggested model significantly outperforms content-based filtering, collaborative filtering, autoencoders, and reinforcement learning approaches across both accuracy and personalization metrics. By combining cutting-edge recommendation techniques with a pedagogical framework, the Presentation Advisor application enables users not only to improve individual presentations but to become consistently better presenters over time. Full article
(This article belongs to the Section Computer Science & Engineering)
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16 pages, 1963 KiB  
Article
Characterization and Functional Analysis of Small Heat Shock Protein Genes (Hsp22.2 and Hsp26.7) in Sitodiplosis mosellana Diapause
by Qitong Huang, Qian Ma, Xiaobin Liu, Keyan Zhu-Salzman and Weining Cheng
Insects 2025, 16(7), 649; https://doi.org/10.3390/insects16070649 - 20 Jun 2025
Viewed by 556
Abstract
Small heat shock proteins (sHsps) play crucial roles in organismal adaptation to stress tolerance. Sitodiplosis mosellana, a devastating insect wheat pest, undergoes long obligatory larval diapause to survive temperature extremes during summer and winter. To elucidate the function of sHsps in this [...] Read more.
Small heat shock proteins (sHsps) play crucial roles in organismal adaptation to stress tolerance. Sitodiplosis mosellana, a devastating insect wheat pest, undergoes long obligatory larval diapause to survive temperature extremes during summer and winter. To elucidate the function of sHsps in this process, two sHsp-encoding genes (SmHsp22.2 and SmHsp26.7) were characterized from S. mosellana, and their responsiveness to diapause and thermal stress, as well as their roles in cold stress, was analyzed. Both SmHsp22.2 and SmHsp26.7 possessed the canonical α-crystallin domain and lacked introns. Quantitative PCR indicated significant upregulation of SmHsp22.2 and SmHsp26.7 during diapause, especially in summer and winter. Notably, SmHsp22.2 exhibited higher expression in summer relative to winter, whereas SmHsp26.7 showed the opposite profile. Moreover, short-term heat shock (≥35 °C) in over-summering larvae or cold shock (≤−10 °C) in over-wintering larvae was found to trigger transcriptional upregulation of both genes, while prolonged temperature extremes (i.e., 45–50 °C or −15 °C) did not elicit a comparable response. RNA interference-mediated knockdown of both genes significantly increased the mortality of S. mosellana larvae under cold stress. These findings indicate the importance of both SmHsps in diapause and environmental adaptation in S. mosellana. Full article
(This article belongs to the Special Issue RNAi in Insect Physiology)
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25 pages, 8034 KiB  
Article
The Impacts of Marine Heatwaves on Economic Fisheries in Adjacent Sea Regions Around Japan Under Global Warming
by Dan Liu, Xinjun Chen and Bilin Liu
Fishes 2025, 10(7), 299; https://doi.org/10.3390/fishes10070299 - 20 Jun 2025
Viewed by 462
Abstract
Climate change has significantly affected marine fisheries. In recent years, marine heatwaves (MHWs) have intensified concurrently with increasing sea surface temperature (SST), particularly along the coast of Japan in the Northwest Pacific. Although the relationships between MHWs and large-scale climate patterns are well [...] Read more.
Climate change has significantly affected marine fisheries. In recent years, marine heatwaves (MHWs) have intensified concurrently with increasing sea surface temperature (SST), particularly along the coast of Japan in the Northwest Pacific. Although the relationships between MHWs and large-scale climate patterns are well established, the long-term effects of MHWs on fisheries remain uncertain. Considering thermal adaptability, we analyzed the catches of warm- and cold-water species from commercially important fisheries in adjacent sea regions around Japan, correlating them with regional SSTs and MHW indices. Our results show that regional SSTs exhibited a persistent increasing trend, with major shifts occurring around 1988/89 and 1998/99. Pronounced interannual–decadal variabilities were observed in the leading principal components (PCs) of different species groups, with step changes concentrated in 1989~1992, 1999~2003, and 2009~2012. Notably, there was a significant negative response of cold groups to warming SSTs. Among warm-water species, only the Japanese sardine (Sardinops melanostictus) catch exhibited a strong correlation with climate change. Gradient forest analysis and threshold generalized additive models (TGAMs) further revealed the nonlinear, threshold-driven responses of the fish groups to environmental variability, which occurred after step changes in both the environmental factors and catches. Matching analysis between the annual change rates of catches and MHW indices confirmed the detrimental effects of strong MHWs on marine fisheries. Full article
(This article belongs to the Section Environment and Climate Change)
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21 pages, 6839 KiB  
Article
Physiological Responses of Laying Hens to Chronic Cold Stress and Ammonia Exposure: Implications for Environmental Management and Poultry Welfare
by Dapeng Li, Fuwei Li, Wei Liu, Haixia Han, Jie Wang, Dan Hao and Yan Sun
Animals 2025, 15(12), 1769; https://doi.org/10.3390/ani15121769 - 16 Jun 2025
Viewed by 606
Abstract
Controlling low ambient temperatures and ammonia levels is critical for effective environmental management in poultry houses during winter, as both represent persistent stressors affecting bird health and productivity. However, evidence regarding their combined long-term effects on the physiological responses of laying hens remains [...] Read more.
Controlling low ambient temperatures and ammonia levels is critical for effective environmental management in poultry houses during winter, as both represent persistent stressors affecting bird health and productivity. However, evidence regarding their combined long-term effects on the physiological responses of laying hens remains limited. In this study, 576 eighteen-week-old Hy-Line Brown hens were randomly assigned to six treatments (8 replicates with 12 birds per replicate each treatment) and housed in environmentally controlled chambers for 20 weeks: T1 (8 °C, ≤5 ppm ammonia), T2 (8 °C, 20 ppm ammonia), T3 (8 °C, 45 ppm ammonia), T4 (20 °C, ≤5 ppm ammonia; control), T5 (20 °C, 20 ppm ammonia), and T6 (20 °C, 45 ppm ammonia). Plasma samples were collected at 22, 26, 30, 34, and 38 weeks to evaluate physiological stress biomarkers (corticosterone, CORT; total antioxidant capacity, T-AOC), immunoglobulins (IgG, IgM, and IgA), and reproductive hormones (luteinizing hormone, LH; follicle-stimulating hormone, FSH; estradiol, E2). At 38 weeks, hypothalamus, pituitary, and spleen tissues were collected to assess the relative mRNA expression of gonadotropin-releasing hormone (GnRH), FSH, tumor necrosis factor-α (TNF-α), and interleukins (IL-1β, IL-6, and IL-10). Results showed that both cold and ammonia stress reduced antioxidant capacity, disrupted immune homeostasis, and altered reproductive hormone profiles. Cold exposure induced acute immunoendocrine alterations with partial physiological adaptation over time, whereas ammonia exerted progressive and cumulative damage, including elevated immunoglobulins (IgG and IgM) and downregulation of GnRH and FSH expression. Combined exposure significantly upregulated TNF-α and IL-1β expression, suggesting a synergistic inflammatory response. These results highlight complex, parameter-specific interactions between cold and ammonia stressors, emphasizing the need for targeted environmental strategies. Stage-specific interventions—thermal regulation in early laying and ammonia control in later phases—are recommended to safeguard hen health and optimize productivity under winter conditions. Full article
(This article belongs to the Special Issue Sustainable Strategies for Intensive Livestock Production Systems)
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16 pages, 1568 KiB  
Article
Exploring the Catalytic Mechanisms of a Newly Identified Salt-Activated Alginate Lyase from Pseudoalteromonas carrageenovora ASY5
by Xiaoyan Zhuang, Chao Jiao, Zewang Guo, Qiong Xiao, Jun Chen, Fuquan Chen, Qiuming Yang, Yi Ru, Huifen Weng, Siyuan Wang, Anfeng Xiao and Yonghui Zhang
Mar. Drugs 2025, 23(6), 254; https://doi.org/10.3390/md23060254 - 15 Jun 2025
Viewed by 532
Abstract
Alginate lyases are critical enzymes in hydrolyzing alginate into alginate oligosaccharides (AOS), which are bioactive compounds known for their antioxidant properties and ability to lower serum glucose and lipid concentrations. However, elucidating catalytic mechanisms and discovering enzymes with enhanced catalytic efficiency remain long-term [...] Read more.
Alginate lyases are critical enzymes in hydrolyzing alginate into alginate oligosaccharides (AOS), which are bioactive compounds known for their antioxidant properties and ability to lower serum glucose and lipid concentrations. However, elucidating catalytic mechanisms and discovering enzymes with enhanced catalytic efficiency remain long-term challenges. Here, we report AlgL2491, a novel bifunctional and cold-adapted alginate lyase from Pseudoalteromonas carrageenovora ASY5, belonging to the polysaccharide lyase family 18. This enzyme uniquely cleaves both polyguluronic (polyG) and polymannuronic (polyM), predominantly releasing disaccharides, trisaccharides, and tetrasaccharides after 12 h of hydrolysis. The enzyme achieves peak catalytic efficiency at 35 °C and pH 7.5, with activity increasing 5.5-fold in 0.5 M of NaCl. Molecular dynamics simulations demonstrate that salt ions enhance structural stability by minimizing conformational fluctuations and strengthening interdomain interactions, providing mechanistic insights into its salt-activated behavior. The alginate oligosaccharides (AOS) exhibit excellent free radical-scavenging activities of 86.79 ± 0.31%, 83.42 ± 0.18%, and 71.28 ± 2.27% toward hydroxyl, ABTS, and DPPH radicals, with IC50 values of 8.8, 6.74, and 9.71 mg/mL, respectively. These findings not only reveal the salt-activation mechanism of AlgL2491 and highlight the potential value of its hydrolysate in antioxidant activity but also provide a sustainable industrial solution in industrial-scale AOS production directly from marine biomass, eliminating the need for energy-intensive desalination of alginate, which may inform future biocatalyst design for marine polysaccharide valorization. Full article
(This article belongs to the Section Marine Biotechnology Related to Drug Discovery or Production)
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22 pages, 1208 KiB  
Article
A Possible Involvement of Sialidase in the Cell Response of the Antarctic Fungus Penicillium griseofulvum P29 to Oxidative Stress
by Radoslav Abrashev, Ekaterina Krumova, Penka Petrova, Rumyana Eneva, Yana Gocheva, Stefan Engibarov, Jeny Miteva-Staleva, Vladislava Dishliyska, Galina Stoyancheva, Boryana Spasova, Vera Kolyovska and Maria Angelova
Life 2025, 15(6), 926; https://doi.org/10.3390/life15060926 - 8 Jun 2025
Viewed by 620
Abstract
Sialidases/neuraminidases remove terminal sialic acid residues from glycoproteins, glycolipids, and oligosaccharides. Our previous research has revealed the distribution of sialidase in non-clinical fungal isolates from different ecological niches, including Antarctica. Fungi adapted to extremely low temperatures possess defense mechanisms necessary for their survival [...] Read more.
Sialidases/neuraminidases remove terminal sialic acid residues from glycoproteins, glycolipids, and oligosaccharides. Our previous research has revealed the distribution of sialidase in non-clinical fungal isolates from different ecological niches, including Antarctica. Fungi adapted to extremely low temperatures possess defense mechanisms necessary for their survival such as the response against oxidative stress. The relationship between oxidative stress and sialidase synthesis has been studied extremely sparsely. The aim of the present study was to investigate the involvement of sialidase in the cell response of the Antarctic strain P. griseofulvum P29 against oxidative stress induced by long- and short-term exposure to low temperatures. The changes in growth temperatures for 120 h (long-term stress) affected biomass accumulation, glucose consumption, sialidase synthesis, and the activity of the antioxidant enzymes superoxide dismutase (SOD) and catalase (CAT). The short-term temperature downshift (6 h) caused oxidative stress, evidenced by changes in the levels of biomarkers, including lipid peroxidation, oxidatively damaged proteins, and the accumulation of reserve carbohydrates. Simultaneously, a sharp increase in SOD and CAT activity was found, which coincided with a significant increase in sialidase activity. This study marks the first demonstration of increased sialidase activity in filamentous fungi isolated from extreme cold environments as a response to oxidative stress. Full article
(This article belongs to the Special Issue Sialic Acid and Sialic Acid Derivatives in Biomedicine)
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20 pages, 1115 KiB  
Review
Genomic and Molecular Mechanisms of Goat Environmental Adaptation
by Ying Lu, Ruoshan Ma, Dongfang Li, Yuyang Gao, Zhengmei Sheng, Jinpeng Shi, Yilong Peng, Zhengdong Gao, Weidong Deng and Xiaoming He
Biology 2025, 14(6), 654; https://doi.org/10.3390/biology14060654 - 5 Jun 2025
Viewed by 919
Abstract
Goats (Capra hircus) are a widely distributed livestock known for their exceptional environmental adaptability. This review presents an integrated overview of recent advances in understanding the genetic and molecular mechanisms underlying goat adaptation to heat, cold, and high-altitude hypoxia. We first [...] Read more.
Goats (Capra hircus) are a widely distributed livestock known for their exceptional environmental adaptability. This review presents an integrated overview of recent advances in understanding the genetic and molecular mechanisms underlying goat adaptation to heat, cold, and high-altitude hypoxia. We first discuss the development of high-quality reference genomes, including recent telomere-to-telomere assemblies. We then examine major adaptive genes such as HSP70, ACTHR, EPAS1, SLC2A1, FGF12, and UCP1, and their roles in thermoregulation, oxygen metabolism, and stress resistance. Additionally, the review explores the synergistic role of immune signaling pathways in environmental adaptation, as well as the regulatory effects of epigenetic mechanisms such as DNA methylation, histone modification, and non-coding RNAs. Future efforts should focus on integrating multi-omics data to uncover the complex molecular networks involved in goat adaptation. This comprehensive synthesis offers valuable insights for precision breeding and long-term sustainability in the context of environmental challenges and climate change. Full article
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22 pages, 1656 KiB  
Review
Genetic Breeding to Improve Freeze Tolerance in Blueberries, a Review
by Ye Chu, Josh Clevenger, Kendall Lee, Jing Zhang and Changying Li
Horticulturae 2025, 11(6), 614; https://doi.org/10.3390/horticulturae11060614 - 30 May 2025
Viewed by 587
Abstract
The abiotic stresses associated with spring/fall freezes and extreme winter cold cause significant economic losses in blueberry production. These problems are exacerbated by climate change and increasingly erratic weather patterns. Developing freeze-tolerant blueberry cultivars with optimized cold hardiness, chilling requirement, and flowering and [...] Read more.
The abiotic stresses associated with spring/fall freezes and extreme winter cold cause significant economic losses in blueberry production. These problems are exacerbated by climate change and increasingly erratic weather patterns. Developing freeze-tolerant blueberry cultivars with optimized cold hardiness, chilling requirement, and flowering and fruiting phenology holds promise for mitigating the risk of these weather-related damages. These weather-resilient cultivars will ensure the long-term productivity and sustainability of the blueberry industry. The focus of this review is to present the current understanding of the major components of genetic breeding for blueberry freeze tolerance, i.e., phenotyping, genotyping, genetic association analysis, and marker development. The advancement in gene regulation and corresponding proteomic changes upon cold acclimation, dormancy, de-acclamation, and flowering and fruiting aids in the understanding of the adaptive stress response in blueberries. A wide range of genetic diversity in freeze tolerance and phenological traits has been identified among cultivated and wild blueberry relatives. Significant efforts have been made to phenotype freeze tolerance, chilling requirement, and flower and fruit development in both field and controlled environmental conditions. Recent studies emphasize the need for high-throughput, image-based phenotyping of blueberry flower development to improve the precision and efficiency of selecting freeze-resilient genotypes. In addition, advancements in blueberry genomics and pangenome resources expanded the potential of variant calling and high-density linkage map construction. Genetic association studies have identified QTL regions linked to freeze tolerance in blueberries, providing valuable targets for selection. The implementation of these advanced genomic tools and high-throughput phenotyping methodology will accelerate the development of weather-resilient blueberry cultivars. Full article
(This article belongs to the Section Genetics, Genomics, Breeding, and Biotechnology (G2B2))
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20 pages, 2829 KiB  
Article
Actinobacteria Emerge as Novel Dominant Soil Bacterial Taxa in Long-Term Post-Fire Recovery of Taiga Forests
by Siyu Jiang, Huijiao Qu, Zhichao Cheng, Xiaoyu Fu, Libin Yang and Jia Zhou
Microorganisms 2025, 13(6), 1262; https://doi.org/10.3390/microorganisms13061262 - 29 May 2025
Cited by 1 | Viewed by 472
Abstract
The long-term post-fire recovery phase is a critical stage for forest ecosystems to progress toward regeneration and mature succession. During this process, soil bacteria exhibit greater environmental adaptability, rapidly driving nutrient cycling and facilitating vegetation restoration. This study investigated the community structure and [...] Read more.
The long-term post-fire recovery phase is a critical stage for forest ecosystems to progress toward regeneration and mature succession. During this process, soil bacteria exhibit greater environmental adaptability, rapidly driving nutrient cycling and facilitating vegetation restoration. This study investigated the community structure and diversity of soil bacteria during long-term recovery after forest fires in the cold temperate zone, focusing on soils from the 2000 fires in Daxing’anling. Soil samples were classified into Low (L), Moderate (M), and High (H) fire damage intensity, with bacterial community composition and diversity analyzed using Illumina sequencing technology. After long-term fire recovery, the contents of soil organic carbon, black carbon, total nitrogen, alkaline nitrogen, available phosphorus, and available potassium were significantly higher elevated (p < 0.05), and water content was significantly lower, compared with that in the control check (CK) group. Soil urease, fluorescein diacetate, soil acid phosphatase, and soil dehydrogenase activities were significantly higher, and soil sucrase activity was significantly lower in H. There was a significant difference in the Alpha diversity index among the groups. Compared with CK, the Shannon index was significantly increased (p < 0.05) in L, while both Chao1 and Shannon indices were significantly decreased (p < 0.05) in M and significantly higher in H than CK. The results of the PCoA showed that there was a significant difference in the Beta diversity of the bacterial community among the groups (R2 = 0.60 p = 0.001). The dominant bacteria groups were Proteobacteria and Acidobacteriota, while Actinobacteria became the new dominant group during the long-term post-fire recovery. AP, WC, DOC, MBC, S-DHA, and S-SC were significantly and positively correlated with soil bacterial diversity (p < 0.05). The results of the co-occurrence network analysis showed that all groups were dominated by symbiotic relationships, with M having the highest network complexity and strongest competitive effects. This study found that the physicochemical properties of soils recovered over a long period of time after fire returned to or exceeded the unfired forest condition. The Actinobacteria phylum became a new dominant bacterial group, with stronger network complexity and competition, in the process of forest recovery after moderate fire. Full article
(This article belongs to the Special Issue Advances in Genomics and Ecology of Environmental Microorganisms)
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27 pages, 2437 KiB  
Article
Hypothalamic Median Eminence Thyrotropin-Releasing Hormone-Degrading Ectoenzyme Activity Is Dispensable for Basal Thyroid Axis Activity in Lean Rodents
by Adair Rodríguez-Rodríguez, Rosa María Uribe, Antonieta Cote-Vélez, Patricia Joseph-Bravo and Jean-Louis Charli
Cells 2025, 14(10), 725; https://doi.org/10.3390/cells14100725 - 15 May 2025
Viewed by 490
Abstract
The amplitude of the phasic output of thyrotropin-releasing hormone (TRH) into the hypothalamus–pituitary portal capillaries is likely controlled by the TRH-degrading ectoenzyme (TRH-DE) expressed on the surface of median eminence (ME) β2-tanycytes. To extend this hypothesis, we performed experiments on adult rodents reared [...] Read more.
The amplitude of the phasic output of thyrotropin-releasing hormone (TRH) into the hypothalamus–pituitary portal capillaries is likely controlled by the TRH-degrading ectoenzyme (TRH-DE) expressed on the surface of median eminence (ME) β2-tanycytes. To extend this hypothesis, we performed experiments on adult rodents reared in standard conditions. TRH-DE was close to the putative sites of TRH release in the male rat external layer of the ME. In global Trhde knockout mice, basal hypothalamus–pituitary–thyroid (HPT) axis parameters were not altered but we detected an increased vimentin (a tanycyte marker) positive coverage of the portal vessels. We then overexpressed TRH-DE or a dominant negative isoform by microinjection of adeno-associated virus 1 (AAV1) vectors into the third ventricle of adult male rats. Two weeks after microinjection, cold-stress-induced serum TSH concentration was decreased if ME TRH-DE activity had been enhanced. However, the long-term modification of TRH-DE activity in the ME had only a small impact on basal serum TSH concentration but increased Trhr expression in the anterior pituitary of animals transduced with AAV1-TRH-DE. Thus, long-term modifications of ME TRH-DE activity lead to limited changes in serum TSH concentration in adult rodents reared in standard conditions, possibly because of adaptations of TRH communication in the ME and/or anterior pituitary. Full article
(This article belongs to the Section Cells of the Nervous System)
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15 pages, 13064 KiB  
Article
Thermal Regime Characteristics of Alpine Springs in the Marginal Periglacial Environment of the Southern Carpathians
by Oana Berzescu, Florina Ardelean, Petru Urdea, Andrei Ioniță and Alexandru Onaca
Sustainability 2025, 17(9), 4182; https://doi.org/10.3390/su17094182 - 6 May 2025
Viewed by 499
Abstract
Mountain watersheds play a crucial role in sustaining freshwater resources, yet they are highly vulnerable to climate change. In this study, we investigated the summer water temperature of 35 alpine springs in the highest part of the Retezat Mountains, Southern Carpathians, between 2020 [...] Read more.
Mountain watersheds play a crucial role in sustaining freshwater resources, yet they are highly vulnerable to climate change. In this study, we investigated the summer water temperature of 35 alpine springs in the highest part of the Retezat Mountains, Southern Carpathians, between 2020 and 2023. During the four-year monitoring period, water temperatures across all springs ranged from 1.2 °C to 10.5 °C. Springs emerging from rock glaciers had the lowest average temperature (2.37 °C), while those on cirque and valley floors were the warmest (6.20 °C), followed closely by springs from meadow-covered slopes (6.20 °C) and those from scree and talus slopes (4.70 °C). However, only four springs recorded summer temperatures below 2 °C, suggesting a direct interaction with ground ice. The majority of springs exhibited temperatures between 2 and 4 °C, exceeding conventional thresholds for permafrost presence. This challenges the applicability of traditional thermal indicators in marginal periglacial environments, where reduced ground ice content within rock glaciers and talus slopes can lead to spring water temperatures ranging from 2 °C to 4 °C during summer. Additionally, cold springs emerging from rock glaciers displayed minimal daily and seasonal temperature fluctuations, highlighting their thermal stability and decoupling from atmospheric conditions. These findings underscore the critical role of rock glaciers in maintaining alpine spring temperatures and acting as refugia for cold-adapted organisms. As climate change accelerates permafrost degradation, these ecosystems face increasing threats, with potential consequences for biodiversity and hydrological stability. This study emphasizes the need for long-term monitoring and expanded investigations into water chemistry and discharge dynamics to improve our understanding of high-altitude hydrological systems. Furthermore, it provides valuable insights for the sustainable management of water resources in Retezat National Park, advocating for conservation strategies to mitigate the impacts of climate change on mountain hydrology and biodiversity. Full article
(This article belongs to the Special Issue Environmental Protection and Sustainable Ecological Engineering)
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