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24 pages, 1300 KB  
Perspective
Strategic Imperatives for High-Definition Map Development in the Emerging Autonomous Vehicle Market of Saudi Arabia
by Kamil Faisal, Wai Yeung Yan, Wenzheng Fan, Man Ho Kwan, Mohammed Alamoudi, Alaa Sindi and Yasser Qaffas
Future Transp. 2026, 6(3), 131; https://doi.org/10.3390/futuretransp6030131 - 18 Jun 2026
Viewed by 195
Abstract
As the Kingdom of Saudi Arabia (KSA) accelerates its transition toward smart mobility under Vision 2030, establishing a robust digital infrastructure is paramount for the safe deployment of autonomous vehicles (AVs). High-definition (HD) maps serve as a critical foundation for this infrastructure, yet [...] Read more.
As the Kingdom of Saudi Arabia (KSA) accelerates its transition toward smart mobility under Vision 2030, establishing a robust digital infrastructure is paramount for the safe deployment of autonomous vehicles (AVs). High-definition (HD) maps serve as a critical foundation for this infrastructure, yet their deployment is severely bottlenecked by extreme operational costs, massive data processing payloads, and rapid environmental variations across vast highway networks. To address these challenges, this paper proposes a comprehensive, localized national strategy structured around three key tasks. First, it establishes a unified national HD map standard to guarantee seamless interoperability and data sharing among competing AV manufacturers and government transport authorities. Second, it implements an AI-powered baseline workflow using Mobile Mapping Systems (MMS) for high-fidelity static map construction, anchored and validated within designated pilot zones, including the King Abdulaziz University campus and key sectors in the Kingdom. Third, it deploys a decentralized, vision-based crowdsourcing system that leverages active public and commercial vehicle fleets for real-time map maintenance. By integrating a sovereign edge-cloud AI infrastructure that respects local Personal Data Protection Law (PDPL), this framework bridges the gap between high-accuracy baseline mapping and long-term economic sustainability, offering an actionable technical roadmap for scaling a resilient digital transport layer across the Kingdom. Full article
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30 pages, 1550 KB  
Systematic Review
Photobiomodulation at Acupuncture Points in Oral and Dental Care: An Umbrella Review of Systematic Reviews
by Javier Basualdo Allende, Alfredo Von Marttens, Vanessa Campos-Bijit, Constanza Morales-Gómez, Leonardo Díaz, Valeria Gómez-Gonzalez, Alexis Vera, Liliann Abarza, Víctor Beltrán and Eduardo Fernández
Appl. Sci. 2026, 16(12), 6159; https://doi.org/10.3390/app16126159 - 18 Jun 2026
Viewed by 138
Abstract
Laser acupuncture, defined as photobiomodulation or low-level laser therapy applied to specific acupuncture points, has been proposed as a non-invasive adjunctive strategy in oral and dental care. This umbrella review aimed to synthesize and critically appraise systematic reviews evaluating laser acupuncture in dental [...] Read more.
Laser acupuncture, defined as photobiomodulation or low-level laser therapy applied to specific acupuncture points, has been proposed as a non-invasive adjunctive strategy in oral and dental care. This umbrella review aimed to synthesize and critically appraise systematic reviews evaluating laser acupuncture in dental and orofacial conditions. The review followed PRISMA 2020 recommendations and was prospectively registered in PROSPERO. PubMed, Embase, Scopus, Web of Science, and the Cochrane Library were searched from inception to 12 May 2026. Systematic reviews with or without meta-analysis were included. Methodological quality was assessed using AMSTAR 2, and findings were narratively synthesized considering methodological quality, overlap, consistency, dosimetric heterogeneity, and clinical applicability. From 263 records identified, six systematic reviews published between 2021 and 2024 met the eligibility criteria. The included reviews addressed three main domains: temporomandibular disorders, dental-related neuropathies, and pediatric dental outcomes. Laser acupuncture protocols used red to near-infrared wavelengths, mainly between 690 and 980 nm, but varied substantially in fluence, energy delivery, irradiation time, session frequency, and acupoint selection. The most consistent signal was observed for short-term pain reduction in temporomandibular disorders, although comparative evidence did not support laser acupuncture as superior to established conservative therapies. Evidence for dental-related neuropathies was associated with possible improvements in neurosensory and motor outcomes, while pediatric evidence suggested possible short-term changes in gag reflex, procedural pain, and bruxism-related outcomes; however, both domains were supported by only one systematic review each and should be considered preliminary and hypothesis-generating. No serious adverse events were reported, but harm reporting was limited. Overall, this umbrella review should be interpreted as an evidence map rather than as a source of high-certainty clinical recommendations. Laser acupuncture may represent an emerging adjunctive approach for selected dental and orofacial indications; however, current evidence remains limited and heterogeneous and does not support standardized protocols, stand-alone use, or definitive clinical recommendations. Full article
(This article belongs to the Special Issue Photobiomodulation and Photodynamic Therapy in Medicine and Dentistry)
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31 pages, 1690 KB  
Review
Patient Acceptance of Colorectal Cancer Exercise Prehabilitation: A Scoping Review
by Todd Leckie, Hamish Sinclair, Leonie Murphy, Stefanie Harding, Neil Botting, Sally Wheelwright, Catherine Aicken, Jörg W Huber and Luke E Hodgson
Anesth. Res. 2026, 3(2), 18; https://doi.org/10.3390/anesthres3020018 - 17 Jun 2026
Viewed by 116
Abstract
Background: Exercise prehabilitation may improve physiological resilience before colorectal cancer (CRC) surgery. However, patient acceptance, reflected by recruitment, retention and adherence, is variably reported. Understanding how acceptance is captured and described is essential for designing effective, equitable interventions. Objectives: Map how CRC prehabilitation [...] Read more.
Background: Exercise prehabilitation may improve physiological resilience before colorectal cancer (CRC) surgery. However, patient acceptance, reflected by recruitment, retention and adherence, is variably reported. Understanding how acceptance is captured and described is essential for designing effective, equitable interventions. Objectives: Map how CRC prehabilitation programmes report recruitment, retention and adherence, and identify characteristics associated with high acceptance. Methods: A scoping review was conducted following published guidance. MEDLINE, Embase, CINAHL, PsycINFO and Cochrane databases were searched. Studies of unimodal or multimodal prehabilitation interventions including an exercise component were included. Data relating to recruitment processes, retention, adherence and engagement-enhancing strategies were extracted and summarised using descriptive and content analysis. Reporting quality and variation were mapped. Results: Thirty-four studies were included: 15 randomised controlled trials, 12 prospective cohorts, four retrospective comparative cohorts, two non-randomised trials, and one quality-improvement project. Recruitment rates varied widely (3.8% to >90%), with four studies not reporting the proportion of eligible patients who declined and no study providing demographic characterisation of patients not recruited. Retention was reported in 31 of 34 studies and was generally high, including seven studies reporting 100% retention, although no consistent definition was used. Adherence was not reported in nine studies; among those reporting it, supervised programmes achieved attendance rates of 68–100% and unsupervised programmes 78–98%. Only four studies quantified adherence to prescribed exercise intensity or volume. No consistent association emerged between programme format (location, supervision, and digital support) and patient acceptance. Conclusions: Substantial variability exists in how CRC prehabilitation studies report recruitment, retention and adherence, constraining understanding of acceptance. Future research should prioritise standardised, detailed acceptance reporting and consider behaviour change theory informed, patient-centred intervention design to ensure effective and equitable CRC prehabilitation. Full article
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27 pages, 13025 KB  
Article
Integrated Multi-Omics Analysis Reveals an HCMV-Associated Late-Gene Signature Associated with Poor Survival in Pediatric Group 3 Medulloblastoma
by Maria F. Stierle, Martin U. Schuhmann, Jens Schittenhelm and Martin Ebinger
Biomedicines 2026, 14(6), 1328; https://doi.org/10.3390/biomedicines14061328 - 11 Jun 2026
Viewed by 228
Abstract
Background: Previous work from our group demonstrated an association between immunohistochemical detection of Human cytomegalovirus (HCMV) late antigen and poor event-free survival (EFS) in pediatric medulloblastoma. Whole-genome sequencing (WGS) further identified increased abundance of HCMV-aligned reads at the UL88 locus, particularly in Group [...] Read more.
Background: Previous work from our group demonstrated an association between immunohistochemical detection of Human cytomegalovirus (HCMV) late antigen and poor event-free survival (EFS) in pediatric medulloblastoma. Whole-genome sequencing (WGS) further identified increased abundance of HCMV-aligned reads at the UL88 locus, particularly in Group 3 tumors, a molecular subgroup associated with aggressive clinical behavior and poor prognosis. Methods: We performed an integrated multi-omics analysis of pediatric medulloblastoma using WGS (n = 39) and RNA sequencing (RNA-seq; n = 28) datasets. RNA-seq data were filtered using stringent alignment criteria (MAPQ ≥ 20) and compared with fetal brain (n = 12), adult brain (n = 12), and HCMV-infected cell culture controls (n = 3). Only high-confidence uniquely aligned reads were retained to reduce nonspecific and multi-mapped viral alignments. Sequencing reads were aligned to the HCMV Merlin reference genome (NC_006273.2) using a standardized analytical pipeline. A subset of 28 cases with matched tumor WGS, tumor RNA-seq, and germline WGS data was used for integrated multi-omics analyses. Orthogonal validation analyses were performed in Group 3 tumors using independent genomic and transcriptomic approaches. Exploratory survival analyses were conducted in a combined cohort (n = 84) integrating genomic and immunohistochemical datasets. Results: Recurrent low-level HCMV-aligned molecular signals were identified across medulloblastoma datasets. Reads aligning to UL76, UL88, and UL99 were the most consistently detected HCMV-associated late-gene signals across RNA-seq and WGS datasets. A composite HCMV late-gene signature (UL76–UL88–UL99) showed higher levels in Group 3 tumors than in other molecular subgroups (p < 0.05 in WGS analyses). Orthogonal analyses demonstrated concordant low-level HCMV-associated genomic and transcriptomic signals enriched in tumors with MYC-associated activation and chromosome 17 imbalance. In the combined cohort (n = 84), elevated HCMV-associated signal assessed by immunohistochemistry and genomic profiling was associated with reduced EFS (median 55 vs. 147 months; log-rank p < 0.001). The subgroup classified as HCMV-high Group 3 demonstrated the strongest association with adverse outcome in exploratory multivariable analyses (HR = 6.43, p = 0.002). Conclusions: This study identifies recurrent low-level HCMV-associated genomic and transcriptomic signals across pediatric medulloblastoma datasets, with preferential enrichment in biologically aggressive Group 3 tumors. Although the extremely low abundance of viral-aligned reads precludes definitive evidence of productive viral infection, the reproducible detection of HCMV-associated molecular signatures across independent sequencing platforms supports further investigation into a potential oncomodulatory association in pediatric medulloblastoma. Additional validation using optimized viral detection methodologies, independent cohorts, and mechanistic studies will be necessary to clarify the biological and clinical significance of these findings. Full article
(This article belongs to the Section Gene and Cell Therapy)
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26 pages, 4445 KB  
Article
A Study on the Global and Spatial Distribution Evaluation of the Geometric State of Exterior Walls Based on Point Clouds
by Sang Jun Hwang, Jonghoon Kim, Yerim Kim, Donggun Lee, Yuseong Lee and Sanghyo Lee
Buildings 2026, 16(12), 2341; https://doi.org/10.3390/buildings16122341 - 11 Jun 2026
Viewed by 192
Abstract
This study proposes an integrated terrestrial laser scanning (TLS)-based workflow for quantitatively and spatially assessing the relative geometric condition of exterior wall surfaces. The workflow consists of point-cloud acquisition, ROI definition, reference-plane estimation, signed-depth computation, grid-based spatial aggregation, specimen-based validation, and real exterior [...] Read more.
This study proposes an integrated terrestrial laser scanning (TLS)-based workflow for quantitatively and spatially assessing the relative geometric condition of exterior wall surfaces. The workflow consists of point-cloud acquisition, ROI definition, reference-plane estimation, signed-depth computation, grid-based spatial aggregation, specimen-based validation, and real exterior wall application. Rather than introducing a fundamentally new point-cloud processing algorithm, the main contribution lies in integrating established processing steps into a consistent surface-based assessment procedure and extending deviation evaluation from simple numerical summaries to spatial interpretation. A 3D-printed validation specimen with designed defect depths of 1, 3, 5, and 7 mm was used for quantitative validation. Among 136 designed defects, 123 ground-truth-mapped ROIs were evaluated, resulting in an MAE of 0.795 mm, RMSE of 1.168 mm, and P95 error of 2.511 mm. A RANSAC threshold-based sensitivity analysis confirmed that the final refined reference plane and major signed-depth statistics remained stable within the tested threshold range. The workflow was further applied to a real exterior wall dataset with 29,933,332 strict-ROI points, yielding a mean signed depth of 2.448 mm, median of 2.691 mm, RMSE of 9.956 mm, P95 of 17.121 mm, and maximum value of 90.827 mm. High-deviation regions with an absolute centered signed depth of 15 mm or greater occupied 28.218 m2, corresponding to 10.62% of the valid analysis area, and were distributed across 57 connected clusters. These results indicate that the proposed workflow can support both quantitative deviation assessment and spatial interpretation of high-deviation regions, while the real exterior wall results should be interpreted as a relative geometric assessment and feasibility demonstration rather than absolute accuracy validation or structural damage assessment. Full article
(This article belongs to the Section Construction Management, and Computers & Digitization)
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19 pages, 3220 KB  
Article
Riemannian Geometry for Noise-Robust Covariance Network Analysis of Schizophrenia EEG: Geometric-Entropic Signatures of Dysconnectivity
by Rui Song, Jinhan He and Jun Wang
Entropy 2026, 28(6), 644; https://doi.org/10.3390/e28060644 - 8 Jun 2026
Viewed by 201
Abstract
Functional brain networks in schizophrenia (SZ) are often characterized by covariance-based measures, yet covariance matrices live on a curved geometric structure rather than in ordinary Euclidean space, complicating noise-robust inference from scalp EEG. We develop a Riemannian Geometry-based Adaptive Nonlinear Coupling Analysis (RGA-NCA) [...] Read more.
Functional brain networks in schizophrenia (SZ) are often characterized by covariance-based measures, yet covariance matrices live on a curved geometric structure rather than in ordinary Euclidean space, complicating noise-robust inference from scalp EEG. We develop a Riemannian Geometry-based Adaptive Nonlinear Coupling Analysis (RGA-NCA) framework that integrates the affine-invariant Riemannian metric (AIRM), tangent space mapping (TSM), and an anatomically adaptive artifact rejection (AAAR) strategy accounting for regional signal-to-noise heterogeneity. The framework is grounded in the observation that Euclidean summaries of symmetric positive definite matrices are sensitive to noise-driven volume inflation, whereas geodesic distances on the manifold emphasize shape deformation. RGA-NCA was evaluated on four benchmark dynamical systems, a supplementary multichannel EEG-like sample covariance simulation, and a public button-tone SZ/HC EEG dataset associated with the auditory feedback paradigm described by Ford et al. (81 subjects; 49 SZ, 32 healthy controls). Compared with Euclidean and linear baselines, RGA-NCA showed lower sensitivity to noise-driven distance distortion and yielded clearer group-level contrasts in the tested ROI analyses; all four pre-specified frontotemporal and parietal channel pairs remained significant after Benjamini–Hochberg FDR correction. The resulting patterns are consistent with reduced long-range connectivity together with localized hyper-synchronization-like effects in SZ. Quantitatively, the Riemannian structural sensitivity index (sim=exp(d2/4)) remained high across all tested SNR levels (−20 to +10 dB; 50 Monte Carlo trials per level; range 0.936–0.964), with only a 0.026 endpoint change between +10 and −20 dB, whereas the Euclidean metric fell from 0.922 at +10 dB to 0.000 at −20 dB. These findings support Riemannian modeling as a candidate strategy for noisy covariance-based neural data, pending validation in larger independent cohorts. Full article
(This article belongs to the Section Entropy and Biology)
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29 pages, 828 KB  
Article
Decoupling Privacy Noise from Optimization in Transformer Forecasting
by Bhagiradh Kantheti and Carlos A. Paz De Araujo
Mach. Learn. Knowl. Extr. 2026, 8(6), 156; https://doi.org/10.3390/make8060156 - 4 Jun 2026
Viewed by 233
Abstract
Strong differential privacy often collapses utility in transformer-based time-series forecasting because noise is injected directly into high-dimensional gradients (e.g., DP-SGD), severely corrupting the optimization process. We introduce Low-Dimensional Feature-Path Privacy for Transformers (LDPT), which enforces privacy by routing calibrated perturbations through a low-dimensional [...] Read more.
Strong differential privacy often collapses utility in transformer-based time-series forecasting because noise is injected directly into high-dimensional gradients (e.g., DP-SGD), severely corrupting the optimization process. We introduce Low-Dimensional Feature-Path Privacy for Transformers (LDPT), which enforces privacy by routing calibrated perturbations through a low-dimensional feature bottleneck (D=16) that is independent of the model parameter count. LDPT implements noise via classically simulated quantum channels (Lindblad/depolarizing dynamics) and finite-shot POVM measurements, providing an auditable mapping from privacy budget ε to perturbation magnitude while keeping the transformer gradients clean. Across the ETT datasets and multiple prediction horizons, LDPT substantially preserves forecasting utility under its native local ε-QDP guarantee. At a nominal per-pass ε=0.1, LDPT limits MSE degradation to under 6%. In contrast, DP-SGD with global (ε,δ)-DP applied to the identical transformer architecture suffers over 100% MSE degradation. Because these methods operate under different privacy definitions (local ε-QDP vs. global (ε,δ)-DP), this comparison illustrates the impact of noise placement rather than equivalent privacy protection. To isolate the effect of the calibration mechanism, we further evaluate a classical Gaussian mechanism on the same feature-path bottleneck, which requires orders-of-magnitude larger noise and severely degrades utility. Membership inference attacks confirm that LDPT does not amplify membership leakage beyond the non-private baseline. These results demonstrate that decoupling privacy noise from optimization through low-dimensional feature-path placement and tight channel-based calibration is critical for practical privacy-preserving transformer forecasting. Full article
(This article belongs to the Section Safety, Security, Privacy, and Cyber Resilience)
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16 pages, 1892 KB  
Article
Genetic Diversity and SNP-Based Fingerprinting of 94 Pumpkin Cultivars: Database Establishment and Population Analysis
by Jiawei Pan, Caochuang Fang, Toheed Anwar and Kun Ma
Plants 2026, 15(11), 1717; https://doi.org/10.3390/plants15111717 - 2 Jun 2026
Viewed by 780
Abstract
Pumpkin (Cucurbita spp.) is a globally significant vegetable crop known for its high nutritional value and remarkable phenotypic diversity. Yet, the surge in new cultivar releases has overwhelmed traditional morphological descriptors, creating critical gaps in variety purity control and breeders’ rights enforcement. [...] Read more.
Pumpkin (Cucurbita spp.) is a globally significant vegetable crop known for its high nutritional value and remarkable phenotypic diversity. Yet, the surge in new cultivar releases has overwhelmed traditional morphological descriptors, creating critical gaps in variety purity control and breeders’ rights enforcement. Despite the established utility of SNP markers as the gold standard for genetic analysis, a dedicated high-resolution molecular database for modern pumpkin cultivars remains unavailable. To address this gap, we conducted whole-genome resequencing (WGS) on 94 representative pumpkin cultivars (spanning C. moschata, C. maxima, and C. pepo). Clean reads were mapped to the Cucurbita maxima reference genome. We employed a stringent pipeline to identify genomic variants and utilized STRUCTURE software, Principal Component Analysis (PCA), and Neighbor-Joining (NJ) trees to evaluate population stratification. Linkage disequilibrium (LD) decay and DNA fingerprinting barcodes were also developed. A total of 8,873,150 high-quality variants were identified, including 7,345,007 SNPs and 1,528,143 InDels, with an average SNP density of 21,281.50 SNPs/Mb. Population analysis consistently categorized the 94 cultivars into two primary subpopulations (G1 and G2). The first two PCs accounted for 74.06% of the total genetic variance. Further analysis revealed that G1 possessed a more complex genetic architecture and slower LD decay compared to G2, suggesting distinct selection histories. Finally, we screened for highly informative biallelic SNPs to construct a DNA fingerprinting database, enabling precise sample discrimination through unique chromatic barcodes. This study fills a critical gap in pumpkin genomics by establishing a high-density SNP database and a robust fingerprinting system. These resources provide a definitive tool for variety certification, seed purity testing, and the advancement of molecular-assisted breeding in pumpkin. Full article
(This article belongs to the Topic Vegetable Breeding, Genetics and Genomics, 2nd Volume)
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17 pages, 3787 KB  
Article
Human-in-the-Loop Enhances Machine Learning Inference in Intraoperative Optical Coherence Tomography Glioma Imaging
by Radik Zinatullin, Alexander Sovetsky, Artem Grishin, Elena Kiseleva, Liudmila Kukhnina, Svetlana Korikova, Alexander Matveyev, Vladimir Zaitsev, Konstantin Yashin and Lev Matveev
Med. Sci. 2026, 14(2), 263; https://doi.org/10.3390/medsci14020263 - 20 May 2026
Viewed by 493
Abstract
Background/Objectives: The integration of Artificial Intelligence (AI) into clinical workflows raises critical questions regarding decision-making responsibility, as fully autonomous systems inevitably carry a margin of error that can be fatal in high-stakes fields like surgery. This study addresses this challenge by evaluating [...] Read more.
Background/Objectives: The integration of Artificial Intelligence (AI) into clinical workflows raises critical questions regarding decision-making responsibility, as fully autonomous systems inevitably carry a margin of error that can be fatal in high-stakes fields like surgery. This study addresses this challenge by evaluating a “Human-in-the-Loop” (HITL) workflow, using intraoperative Optical Coherence Tomography (OCT) for glioma detection. We aimed to determine if integrating Machine Learning (ML)-generated segmentation maps with human contextual analysis resolves the tension between automation and clinical responsibility, yielding superior diagnostic reliability compared to structural or quantitative imaging alone. Methods: We retrospectively analyzed 86 intraoperative OCT scans from 27 patients. Five neurosurgeons blindly assessed the data across three progressive levels of processing: (1) structural scans, (2) physics-based parametric maps, and (3) SVM-based generated segmentation maps. Crucially, the HITL inference performance on segmentation maps was benchmarked against “models-only” inference pipeline: a SVM and a state-of-the-art multimodal reasoning model, Gemini 3.1 Pro. To evaluate interpretability and the operator’s ability to confidently exercise their authority, we measured inter-rater consistency alongside diagnostic performance. Results: The results demonstrate that, while quantitative parametric maps improved Global Accuracy (87% [95% CI: 82–92%]) compared to structural scans (80% [95% CI: 73–86%]), they suffered from an “interpretability gap,” resulting in a moderate inter-rater consistency of 0.68 [95% CI: 0.59–0.78]. In contrast, the HITL approach using segmentation maps maximized consensus to 0.98 [95% CI: 0.95–1.00] and achieved the highest performance (Accuracy 94% [95% CI: 88–98%] and Sensitivity 98% [95% CI: 92–100%]). Compared to the standalone models, the HITL approach significantly outperformed the SVM baseline (Accuracy 84% [95% CI: 81–87%]; Sensitivity 83% [95% CI: 78–88%]). Furthermore, it surpassed the SOTA Gemini 3.1 Pro model (Accuracy 90% [95% CI: 83–95%]; Sensitivity 86% [95% CI: 74–95%]). While the HITL sensitivity demonstrated a definitive and statistically significant edge over the Gemini model, the accuracy improvement fell just slightly short of undisputed statistical significance due to overlapping confidence intervals. Conclusions: By utilizing their clinical domain knowledge of tumor invasion patterns and topological priors, surgeons effectively filtered algorithmic noise—overriding ML errors in 69% (9 out of 13) false positive cases that models alone could not resolve. This demonstrates exactly how and where HITL optimally utilizes human contextual intelligence to outperform autonomous “models-only” pipelines, confirming a human-ML synergy that augments the objectivity of machine learning with human domain knowledge. This paradigm ensures that the ultimate responsibility for diagnostic inference remains safely and practically in human hands. Open Data Initiative: To ensure essential reproducibility, enable independent multi-center validation and support open science, all examples of intraoperative in vivo OCT brain scans used in this study are made publicly available. To the best of our knowledge, this represents the first open-access data of its kind globally. Full article
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17 pages, 323 KB  
Review
Toward a Molecular Reclassification of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome: Integrating Multi-Omics, Machine Learning, and Precision Medicine
by Joshua Frank, Nicole Nesterovitch, Chetana Movva, Nancy G. Klimas and Lubov Nathanson
Int. J. Mol. Sci. 2026, 27(10), 4436; https://doi.org/10.3390/ijms27104436 - 15 May 2026
Viewed by 908
Abstract
Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is a complex, multi-system disease characterized by a multitude of symptoms across various organ systems. Diagnosis has relied heavily on heterogeneous clinical symptom presentation and evolving case definitions, with treatment focused on addressing presenting symptoms due to the [...] Read more.
Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is a complex, multi-system disease characterized by a multitude of symptoms across various organ systems. Diagnosis has relied heavily on heterogeneous clinical symptom presentation and evolving case definitions, with treatment focused on addressing presenting symptoms due to the paucity of validated biomarkers. Meanwhile, advances have been made in understanding the underlying pathophysiology through strong epidemiologic, clinical, and basic science studies. This narrative review synthesizes recent advances that are likely to drive a shift in understanding from symptom-based classification toward a molecularly defined understanding of the disease. This shift in understanding will likely provide the foundation for future research efforts focused on targeting diagnosis and treatment more effectively. Specifically, we reference the identification of rare genetic risk variants through the HEAL2 deep learning framework, the large-scale DecodeME genome-wide association study, and dynamic epigenetic markers of disease state. In addition, the findings revealed the downstream consequences of this genetic and epigenetic priming: chronic innate immune activation, CD8+ T cell exhaustion characterized by upregulation of the exhaustion-driving transcription factors Thymocyte Selection-Associated HMG Box (TOX) and Eomesodermin (EOMES), and a cellular energy crisis centered on mitochondrial dysfunction. Furthermore, results of recent studies have revealed sex-specific transcriptomic and proteomic signatures of maladaptive recovery. We also highlight the role of machine learning and artificial intelligence integrations in translating high-dimensional multi-omics data into actionable biological insights, including the identification of monocyte subsets via Positive Unlabeled Learning, circulating cell-free RNA diagnostic signatures, and integrated multi-modal disease models such as BioMapAI. The combination of these findings, which highlight multiple identifiable mechanisms of molecular activity, support the feasibility of molecular subtyping, precision diagnostics, and targeted therapeutic strategies for ME/CFS. Full article
39 pages, 525 KB  
Article
Spatial–Temporal EEG Imaging for Dual-Loop Neuro-Adaptive Simulation: Cognitive-State Decoding and Communication Gating in Critical Human–Machine Teams
by Rubén Juárez, Antonio Hernández-Fernández, Claudia Barros Camargo and David Molero
J. Imaging 2026, 12(5), 208; https://doi.org/10.3390/jimaging12050208 - 12 May 2026
Viewed by 443
Abstract
Human performance in critical environments is frequently degraded by mistimed communication delivered during periods of visual–cognitive saturation. In such settings, failures arise not only from individual limitations but also from poor coordination between operators under rapidly changing workload conditions. We present a dual-loop [...] Read more.
Human performance in critical environments is frequently degraded by mistimed communication delivered during periods of visual–cognitive saturation. In such settings, failures arise not only from individual limitations but also from poor coordination between operators under rapidly changing workload conditions. We present a dual-loop neuro-adaptive simulation framework based on real-time spectral–topographic EEG representations, in which multichannel cortical activity is transformed into dynamic spatial maps and decoded to regulate both operator assistance and team communication. The system integrates 14-channel wireless EEG (Emotiv EPOC X, 256 Hz), gaze tracking, telemetry, and communication events through an LSL-based multimodal synchronization pipeline. A hybrid CNN–LSTM model processes sequences of spectral-topographic EEG maps to classify three operationally actionable neurocognitive states—Channelized Attention, Diverted Attention, and Surprise/Startle—while also estimating a continuous Cognitive Load Index (CLI). These representation-derived features are then used by a multi-agent proximal policy optimization (MAPPO) controller to generate two coordinated outputs: (i) adaptive haptic guidance for the pilot, designed to reduce reliance on overloaded visual and auditory channels, and (ii) a traffic-light communication gate for the telemetry engineer, regulating whether radio intervention should proceed, be delayed, or be withheld. In a high-fidelity dual-station simulation with 25 pilot–engineer pairs, the proposed framework was associated with a reduction of more than 30% in communication breakdown errors relative to open-loop telemetry, with the strongest effects observed during peak-load windows, while preserving realistic task progression. It also improved pilot reaction time to time-critical warnings and reduced engineer decision load under the tested conditions. These findings support the use of spectral-topographic EEG representations as a practical basis for combining multimodal neurophysiological sensing, spatiotemporal pattern decoding, and adaptive coordination in high-pressure human–machine teams. At the same time, the study should be interpreted as evidence of controlled feasibility in a simulated setting rather than as definitive proof of field-level generalization. We further discuss deployment constraints and propose privacy-by-design safeguards to ensure that neurocognitive signals are used exclusively for operational adaptation rather than employability assessment or performance scoring. Full article
(This article belongs to the Section AI in Imaging)
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25 pages, 2476 KB  
Systematic Review
Agro-Industrial By-Product Valorization for Sustainable Materials: A Systematic Literature Review of Methods, Trends and Research Frontiers
by Leonardo Agnusdei, Sara De Toro, Pier Paolo Miglietta, Zahra Ardakani and Giulio Paolo Agnusdei
Sustainability 2026, 18(9), 4525; https://doi.org/10.3390/su18094525 - 4 May 2026
Viewed by 1014
Abstract
Rising population pressures and growing resource consumption underscore the urgent need for sustainable strategies in resource management and waste valorization. Agriculture and the agri-food industry generate substantial biomass residues that, when effectively reused, can be transformed into high-value materials aligned with circular economy [...] Read more.
Rising population pressures and growing resource consumption underscore the urgent need for sustainable strategies in resource management and waste valorization. Agriculture and the agri-food industry generate substantial biomass residues that, when effectively reused, can be transformed into high-value materials aligned with circular economy and bioeconomy principles. This study presents a Systematic Literature Review (SLR) on the valorization of agro-industrial by-products, focusing on their potential to drive sustainable material innovation strategies. Using the Scopus database, 1063 publications (2015–2025) were analyzed through bibliometric, network and content analysis methods combined with a quantitative meta-analytical approach. The bibliometric analysis outlines research trends and identifies leading journals and disciplines, while network mapping reveals five thematic clusters and a transition toward integrated frameworks linking sustainability and industrial applications. The content analysis is performed through a quantitative meta-analytical approach that highlights that studies integrating multiple waste origins tend to achieve higher scientific visibility. Overall, results highlight a 27.5% annual growth in publication output and five dominant thematic areas: waste recovery, chemical recovery, systemic valorization, energy recovery and alternative fuels. Studies involving multiple waste sources display higher citation averages, highlighting the relevance of integrated valorization strategies. This review provides a solid foundation for future research on agro-industrial by-product management by contributing to the definition of sustainable supply-chain strategies. Full article
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20 pages, 30829 KB  
Article
Crop-IRM: An Intelligent Recognition and Management System for Organ Characteristics of Crop Germplasm Resources
by Jie Zhang, Chenyao Yang, Hailin Peng, Xintong Wei, Jiaqi Zou, Shiyu Wang, Zhaohong Lu, Xianming Tan and Feng Yang
Agriculture 2026, 16(9), 996; https://doi.org/10.3390/agriculture16090996 - 30 Apr 2026
Viewed by 1609
Abstract
The traditional methods of field-based phenotypic data collection for crop germplasm resources are often inefficient and highly subjective. As the foundation for breeding innovation, these resources require precise identification of phenotypic traits for effective evaluation and utilization. Therefore, efficient and standardized management of [...] Read more.
The traditional methods of field-based phenotypic data collection for crop germplasm resources are often inefficient and highly subjective. As the foundation for breeding innovation, these resources require precise identification of phenotypic traits for effective evaluation and utilization. Therefore, efficient and standardized management of germplasm data is critical during the breeding process. To address this, we have developed an intelligent recognition and management system focused on the crop’s organ characteristics. The system consists of a web client for overall project management and data download, and a WeChat Mini Program for data collection and uploading. Both components are integrated with image analysis models. Using a soybean variety screening experiment as a case study, we have constructed multiple high-definition datasets for soybean phenotypic traits, and employed YOLOv11 series models for object detection, image classification, instance segmentation, and pose estimation to build analytical models for each of these traits. All models achieved a mean average precision (mAP@0.5) exceeding 94%, along with a top1_accuracy of 0.999. In practical evaluations, all models took between 0.71 and 3.03 s to make predictions for 100 images, achieving an accuracy rate of over 98%. This system delivers a comprehensive solution for field phenotypic identification of crop germplasm resources, substantially enhancing the efficiency and objectivity of data collection and analysis. It serves as a valuable decision-support tool for precision breeding and digital agriculture. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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39 pages, 7612 KB  
Article
High-Definition Brain Network (HDBN) Delineation of CDKL5 Deficiency Disorder (CDD) in Genetically Engineered Mice
by Dalton West, Noah William Coulson, Devin Raine Everaldo Cortes, Kristina Elsa Schwab, Thomas Becker-Szurszewski, Sean Hartwick, Margaret Caroline Stapleton, Gabriella Marie Saladino, Cecilia Wen-Ya Lo, Christina M. Patterson, Subramanian Subramanian, Deepa Soundara Rajan and Yijen Lin Wu
Biomolecules 2026, 16(5), 652; https://doi.org/10.3390/biom16050652 - 28 Apr 2026
Viewed by 1004
Abstract
Cyclin-Dependent Kinase-Like 5 (CDKL5) Deficient Disorder (CDD) is a rare X-linked developmental and epileptic encephalopathy characterized by early-onset refractory epilepsy, severe neurodevelopmental impairment, and lifelong disability. Although more than thirty anti-seizure medications are available, most CDD patients remain pharmaco-resistant. Gene-based therapies are emerging, [...] Read more.
Cyclin-Dependent Kinase-Like 5 (CDKL5) Deficient Disorder (CDD) is a rare X-linked developmental and epileptic encephalopathy characterized by early-onset refractory epilepsy, severe neurodevelopmental impairment, and lifelong disability. Although more than thirty anti-seizure medications are available, most CDD patients remain pharmaco-resistant. Gene-based therapies are emerging, but therapeutic development is hindered by marked clinical heterogeneity, small patient populations, and the lack of robust, translatable brain-based biomarkers for clinical trials. Genetically engineered Cdkl5 mouse models recapitulate many cognitive, behavioral, and molecular features of CDD, yet their utility is limited by the absence of overt seizures, precluding seizure-based outcome measures. Here, we establish high-definition brain network (HDBN) biomarkers using advanced diffusion MRI tractography combined with graph-theoretical analysis to quantify whole-brain network organization in Cdkl5 knockout mice. Diffusion MRI enables non-invasive mapping of axonal connectivity by leveraging anisotropic water diffusion, while high-angular-resolution acquisition overcomes key limitations of conventional diffusion tensor imaging in regions with complex fiber architecture. We demonstrate that Cdkl5 knockout mice exhibit reproducible and region-specific disruptions in brain network organization, prominently affecting the somatosensory and somatomotor cortex, hippocampus, hypothalamus, amygdala, and superior colliculus—regions implicated in cognition, learning and memory, homeostasis, anxiety, and visual–motor function. In contrast, networks within the entorhinal cortex remain largely preserved. These findings identify HDBN metrics as sensitive, non-invasive biomarkers that capture clinically relevant circuit-level abnormalities in CDD. Because diffusion MRI–based network analyses are directly translatable across species, HDBN biomarkers provide a unified framework for therapeutic evaluation in mouse models, large animals, and human clinical trials, enabling longitudinal monitoring of disease progression and treatment response. Full article
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27 pages, 1492 KB  
Review
High-Frequency Miniprobe Endoscopic Ultrasonography Across the Gastrointestinal Tract
by Francesco Bombaci, Angelo Bruni, Margherita Pavanato, Giuseppe Dell’Anna, Francesco Vito Mandarino, Giulio Calabrese, Andrea Lisotti, Pietro Fusaroli, Leonardo Henry Eusebi, Giovanni Barbara and Paolo Cecinato
Diagnostics 2026, 16(9), 1316; https://doi.org/10.3390/diagnostics16091316 - 28 Apr 2026
Viewed by 549
Abstract
Miniprobe endoscopic ultrasonography (mEUS) combines high-resolution imaging of the gastrointestinal (GI) wall and bile ducts with ease of applicability during routine endoscopy. This narrative review aims to provide an overview of known and emerging fields of application for mEUS in gastrointestinal endoscopy. After [...] Read more.
Miniprobe endoscopic ultrasonography (mEUS) combines high-resolution imaging of the gastrointestinal (GI) wall and bile ducts with ease of applicability during routine endoscopy. This narrative review aims to provide an overview of known and emerging fields of application for mEUS in gastrointestinal endoscopy. After its initial development in pancreatobiliary scenarios in the early 1990s, mEUS has been recently reconsidered a third-space endoscopic technique that is progressively developing and spreading for the treatment of early gastrointestinal neoplastic lesions. The high spatial resolution of mEUS provides an accurate assessment of the degree of submucosal invasion in early esophageal, gastric, and colorectal neoplasia, while the small caliber of catheters allows for mEUS employment in settings where standard echoendoscopes are impractical (e.g., severe stenoses or proximal colonic lesions). Beyond cancer staging, mEUS offers point-of-care characterization of subepithelial lesions by defining the layer of origin and echo-pattern, eventually defining endoscopic resectability, but definitive diagnosis remains histological. In pancreatobiliary diseases, miniprobe intraductal ultrasonography (IDUS) shows its strongest application for indeterminate biliary strictures when endoscopic retrograde cholangiopancreatography (ERCP)-based sampling strategies and brushing cytology show inconclusive diagnoses, and in choledocholithiasis, particularly for the detection of small stones/sludge and confirmation of duct clearance. IDUS is also valuable for the staging of ampullary tumors, for longitudinal extension mapping in hilar cholangiocarcinoma and for selected portal biliopathy scenarios. Overall, mEUS and IDUS are high-resolution adjuncts that can meaningfully refine local decision-making in the treatment of superficial epithelial/subepithelial tumors or lesions involving the bile ducts. Limitations include shallow penetration, lack of tissue acquisition capability, a relative increase in post-ERCP pancreatitis risk for intraductal use, and substantial cost with limited availability in lower-volume centers. Full article
(This article belongs to the Special Issue Advances in Gastrointestinal Endoscopy: From Diagnosis to Therapy)
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