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Search Results (490)

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Keywords = grain-filling stage

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25 pages, 1280 KB  
Review
Synchronizing the Panicle: A Spatiotemporal Network View of Phytohormones in Rice Grain Filling and Agronomic Regulation
by Zhendong Ji, Sijia Wang, Qun Hu, Hongcheng Zhang and Guangyan Li
Agronomy 2026, 16(1), 60; https://doi.org/10.3390/agronomy16010060 - 25 Dec 2025
Viewed by 132
Abstract
The grain-filling stage is crucial for determining yield and quality in rice. This process, and the pronounced disparity in development between superior and inferior grains, is orchestrated by a dynamic network of endogenous phytohormones. However, an integrated synthesis of their synthesis, transport, signaling, [...] Read more.
The grain-filling stage is crucial for determining yield and quality in rice. This process, and the pronounced disparity in development between superior and inferior grains, is orchestrated by a dynamic network of endogenous phytohormones. However, an integrated synthesis of their synthesis, transport, signaling, and crosstalk—particularly in the context of modern high-yield cultivation—is lacking. This review comprehensively analyzes the roles of auxin, cytokinin, gibberellin, abscisic acid, ethylene, brassinosteroids, and polyamines, with emphasis on their spatiotemporal dynamics and interactions in shaping grain fate. We explicitly link these hormonal mechanisms to agronomic and chemical regulation practices, such as nitrogen management and alternate wetting-drying irrigation. By synthesizing this knowledge, we aim to propose a unified model of grain filling regulation. This framework provides an actionable theoretical foundation for designing precise strategies to manipulate hormonal balances, thereby improving grain filling uniformity, yield, and quality in rice. Full article
(This article belongs to the Special Issue Genetic Architecture of Kernel Development in Cereal Crops)
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18 pages, 3023 KB  
Article
Integrated Transcriptome and Metabolome Analysis Revealed the Molecular Mechanisms of Cold Stress in Japonica Rice at the Booting Stage
by Wendong Ma, Zhenhua Guo, Peng Li, Hu Cao, Yongsheng Cai, Xirui Zhang, Xiao Han, Yanjiang Feng, Jinjie Li and Zichao Li
Agriculture 2026, 16(1), 19; https://doi.org/10.3390/agriculture16010019 - 21 Dec 2025
Viewed by 218
Abstract
Japonica rice is susceptible to cold stress at the booting stage, yet the systematic molecular mechanisms underlying varietal disparities in cold tolerance at this stage remain poorly understood. To fill this research gap, cold-tolerant LG1934 (V3) and cold-sensitive KD8 (V6) were subjected to [...] Read more.
Japonica rice is susceptible to cold stress at the booting stage, yet the systematic molecular mechanisms underlying varietal disparities in cold tolerance at this stage remain poorly understood. To fill this research gap, cold-tolerant LG1934 (V3) and cold-sensitive KD8 (V6) were subjected to low-temperature treatment (15 °C) for 0 h (T1), 72 h (T3), and 120 h (T5) at the booting stage, followed by analyses of agronomic traits, antioxidant physiology, metabolome, transcriptome, and weighted gene co-expression network analysis (WGCNA). Phenotypic results showed that low temperature was the main driver of differences in panicle length, seed setting rate, and grain weight between the two varieties, with V3 exhibiting significantly stronger cold tolerance. Under cold stress, V3 maintained higher activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), accompanied by lower O2 accumulation and higher contents of malondialdehyde (MDA), H2O2, and proline compared to V6. Metabolomic analysis identified 56 differential accumulated metabolites (DAMs), with amino acids and their derivatives (notably L-aspartic acid) as key contributors. RNA-seq analysis identified 472 common differentially expressed genes (DEGs) that were enriched in alanine, aspartate, and glutamate metabolism, with 20 transcription factors (TFs) from TCP, WRKY, and bHLH families screened. The WGCNA revealed nine DEM-correlated modules, with orange and pink modules positively associated with L-aspartic acid. Eleven core TFs were identified, among which OsPCF5 acted as a hub regulator that activated OsASN1 transcription to promote L-aspartate biosynthesis, enhancing ROS scavenging and cold tolerance. This study systematically demonstrated the cold tolerance molecular network in japonica rice at the booting stage, highlighting the antioxidant system and L-aspartate-mediated pathway, and the core genes provided valuable resources for cold-tolerance breeding. Full article
(This article belongs to the Section Crop Production)
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31 pages, 7685 KB  
Article
Physiological and Growth Responses of Thai Rice Genotypes to High Salinity Stress at the Seedling and Reproductive Stages
by Supranee Santanoo, Oracha Khianpho, Jirawat Sanitchon and Piyada Theerakulpisut
Plants 2025, 14(24), 3748; https://doi.org/10.3390/plants14243748 - 9 Dec 2025
Viewed by 251
Abstract
The objectives of this study were to select Thai rice that are tolerant at the seedling stage and investigate their growth, physiological and yield responses at the reproductive stage in comparison with the standard salt-tolerant Pokkali (PK). Twenty-two local, commercial and improved Thai [...] Read more.
The objectives of this study were to select Thai rice that are tolerant at the seedling stage and investigate their growth, physiological and yield responses at the reproductive stage in comparison with the standard salt-tolerant Pokkali (PK). Twenty-two local, commercial and improved Thai rice genotypes along with PK and salt-susceptible IR29 were evaluated at the seedling stage for salt tolerance using a 15 dS m−1 saline solution with five replications. Ten selected genotypes were grown in pots with four replications and exposed to a 15 dS m−1 saline level from early booting to the flowering stage. During the grain-filling stage, salt treatments decreased from 15 to 12 dS m−1 and were sustained at this level until harvest. The experimental design for both experiments was a randomized complete block design (RCBD). Based on the physiology of flag leaves, almost all genotypes exceled in the protection of chlorophyll, relative water content (RWC), membrane integrity and lipid peroxidation. In contrast, the photosynthesis, growth and grain yield of all were dramatically reduced. The rice genotypes exhibited varying degrees of osmotic adjustment (OA), ranging from 1.598 to 2.541 MPa. The cultivar RD73 and line TSKC1–144, which were genetically improved from KDML105 by the introgression of a salt-tolerant QTL/gene from PK, showed the least reduction in grain yield (60 and 53% reduction, respectively) along with PK (60%). Among the five Thai local rice varieties, Go Main Surin (GMS) showed the least reduction in grain weight (58%), total plant dry weight (28%) and green leaf dry weight (1%), while Khao Gaew (KG) and Leuang Puang Tawng (LPT) were the most reduced. PK and RD73 showed a high level of tolerance at both the seedling and reproductive stages. In contrast, KG and LPT, which exhibited high tolerance at the seedling stage, showed high susceptibility in growth, yield and most physiological traits. On the other hand, TSKC1–144 was sensitive at the seedling stage but showed increased tolerance at the reproductive stage. This result implies that suitable cultural practices should be performed to obtain the best field conditions for growing rice genotypes having different levels of salt tolerance at the seedling and reproductive stages. Future research should focus on molecular characterization of tolerance mechanisms of the promising local genotypes and the potential to use them as tolerance gene donors. Full article
(This article belongs to the Section Crop Physiology and Crop Production)
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26 pages, 3336 KB  
Article
Co-Incorporation of Controlled-Release Urea and Conventional Urea Enhances Rice Yield, Economic Benefits, and Nitrogen Use Efficiency in Saline–Alkali Paddy Fields
by Zhouzhou Wu, Jiaxin Liu, Jiamei Nie, Chao Liang, Shimeng Guo, Chanchan Zhou, Yuancai Huang and Shu Wang
Agronomy 2025, 15(12), 2786; https://doi.org/10.3390/agronomy15122786 - 2 Dec 2025
Viewed by 585
Abstract
The combination of controlled-release urea (CRU) and conventional urea (CU) has become an important practical strategy to simultaneously increase rice yield, economic benefits, and nitrogen (N) use efficiency (NUE) with one-time fertilization management. However, the method by which the combination of CRU and [...] Read more.
The combination of controlled-release urea (CRU) and conventional urea (CU) has become an important practical strategy to simultaneously increase rice yield, economic benefits, and nitrogen (N) use efficiency (NUE) with one-time fertilization management. However, the method by which the combination of CRU and CU intervenes with rice yield, economic benefits, and NUE in saline–alkali paddy fields has not yet been established. Accordingly, a two-year field experiment was set up with a total of seven treatments (CK, no N application; CUF, conventional urea split applications; RCUF, CUF treatment with 20% N reduction; CRBF1, 50%CRU + 50%CU one-time base application; CRBF2, 70%CRU + 30%CU one-time base application; RCRBF1, CRBF1 treatment with 20% N reduction; RCRBF2, CRBF2 treatment with 20% N reduction). The results showed that the controlled-release blended fertilizer (CRBF) treatments significantly increased the yield, economic benefits, and NUE over the two years. The CRBF1 and CRBF2 treatments significantly increased the rice yield by 5.10–6.77% and 10.41–11.04%, N recovery efficiency by 13.30–17.40% and 21.69–26.75%, and N agronomic efficiency by 10.40–13.91% and 21.26–22.10% compared to the CUF treatment, respectively. The RCRBF1 and RCRBF2 treatments maintained rice yields and significantly increased NUE compared to the CUF treatment. The analysis of yield components indicated that the greater rice yields of the CRBF were mainly attributed to increased panicle numbers and spikelet numbers per m2. Furthermore, the post-anthesis dry matter, N accumulation, flag SPAD values, flag photosynthetic rates, and soil ammonium nitrogen content were higher during the grain-filling stage of the CRBF treatments compared to the CUF treatments. Compared with the CUF treatment, the CRBF1 and CRBF2 treatments increased economic benefits by 8.74–11.16% and 17.14–17.41%. Therefore, the combination of CRU and CU can increase rice yield, economic benefits, and NUE in saline–alkali paddy fields. Moreover, it is recommended to apply CRU and CU at a ratio of 7:3 in a single basal application as a green and efficient alternative N management strategy for saline–alkali paddy fields. The results provide a scientific basis for N management strategies in saline–alkali paddy fields. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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21 pages, 2203 KB  
Article
Application of Exogenous 24-Epibrassinolide at the Silking Stage Alleviates the Effects of Post-Silking Heat Stress on Photosynthetic Performance of Waxy Maize
by Jiawei Liu, Jing Li, Jian Guo, Huan Yang, Guanghao Li and Dalei Lu
Agriculture 2025, 15(23), 2445; https://doi.org/10.3390/agriculture15232445 - 26 Nov 2025
Viewed by 356
Abstract
Heat stress (HS) during the grain-filling stage severely limits yield in waxy maize by impairing leaf physiology and suppressing photosynthetic capacity. Although exogenous brassinosteroids are recognized for enhancing thermotolerance, their specific role in sustaining photosynthetic performance in waxy maize under HS has not [...] Read more.
Heat stress (HS) during the grain-filling stage severely limits yield in waxy maize by impairing leaf physiology and suppressing photosynthetic capacity. Although exogenous brassinosteroids are recognized for enhancing thermotolerance, their specific role in sustaining photosynthetic performance in waxy maize under HS has not been thoroughly investigated. This study investigated whether exogenous 24-epibrassinolide (BR) application could alleviate HS-induced damage in two waxy maize hybrids. Plants were exposed to HS with/without BR treatment over two growing seasons. Yield components, photosynthetic parameters, chloroplast ultrastructure, antioxidant enzyme activities, and physiological traits were analyzed. HS during the grain-filling stage significantly reduced maturity yields (SYN5: −42.8%; YN7: −39.0%) by impairing photosynthetic efficiency, chloroplast integrity, antioxidant capacity, and the translocation amount and rate of vegetative organs photosynthate after pollination. Chloroplasts exhibited structural disorganization and pronounced swelling. Photosynthetic pigment content and enzyme activities (ribulose-1,5-bisphosphate carboxylase/oxygenase, phosphoenolpyruvate carboxylase) declined, while reactive oxygen species accumulation increased. Exogenous BR substantially restored yields by preserving the chloroplast ultrastructure, enhancing photosynthetic function, reactivating antioxidant enzymes (ascorbate, catalase, superoxide dismutase), and reducing oxidative damage. BR also optimized hormone balance (reduced abscisic acid, increased indole-3-acetic acid) and elevated soluble protein/sugar contents. Meanwhile, BR reversed the negative effects of HS on dry matter accumulation and translocation. SYN5 suffered greater HS damage but exhibited stronger BR-mediated recovery than YN7. In conclusion, BR application mitigates HS by protecting the chloroplast structure, boosting photosynthetic resilience, and activating antioxidant defenses, offering a strategy to safeguard waxy maize productivity under HS. Full article
(This article belongs to the Special Issue Physiological Responses of Maize to Abiotic Stress)
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12 pages, 868 KB  
Article
Partial Replacement of Chemical Fertilizer by Biochar-Based Fertilizer Increases Rice Yield and Soil Quality
by Chao Ding, Xikun Luo, Yuhui Wang, Weihua Long, Yongxiang Guan, Qiong Hou, Cansheng Yuan and Lin Wang
Agronomy 2025, 15(12), 2716; https://doi.org/10.3390/agronomy15122716 - 25 Nov 2025
Viewed by 317
Abstract
Substituting chemical fertilizers with organic fertilizers is a significant agricultural practice that can enhance crop yield while influencing soil activity. To investigate the effects of biochar-based organic fertilizer on rice yield, quality, and soil physicochemical properties and activity, this study conducted a field [...] Read more.
Substituting chemical fertilizers with organic fertilizers is a significant agricultural practice that can enhance crop yield while influencing soil activity. To investigate the effects of biochar-based organic fertilizer on rice yield, quality, and soil physicochemical properties and activity, this study conducted a field experiment with three treatments: chemical fertilizer only (CK), 30% of chemical nitrogen substituted with conventional organic fertilizer (CF), and 30% of chemical nitrogen substituted with biochar-based organic fertilizer (BF). Compared with chemical fertilizer alone (CK), both CF and BF treatments significantly increased rice yield by 8.9% and 14.2%, respectively, with BF showing a further increase over CF, primarily attributed to an 18.7% increase in panicle number. Both organic fertilizer treatments significantly improved grain quality, reducing amylose content by 4.6% and 13.1%, and increasing taste value by 3.3% and 3.6%, respectively. Dry matter accumulation throughout the growth period was significantly enhanced, with BF increasing total dry weight by 11.2% at maturity compared to CK. Root morphology was markedly improved, with BF increasing root volume by 146.1% at the grain-filling stage. Soil nutrient content was significantly elevated, showing maximum increases under BF of 118.9% for alkali-hydrolyzable nitrogen, 51.7% for ammonium nitrogen, 30.6% for available phosphorus, and 177.6% for available potassium. Soil enzyme activity analysis revealed significant enhancements in urease, acid phosphatase, and sucrase activities, with maximum increases of 91.5%, 105.6%, and 104.2%, respectively, under BF. These findings demonstrate that organic fertilizers, particularly biochar-based organic fertilizer, can synergistically enhance rice yield and quality by promoting root growth, strengthening soil microbial activity and enzymatic reactions, and optimizing nutrient supply. Biochar-based organic fertilizer exhibits significant advantages in improving soil biological fertility and maintaining stable nutrient supply during the late growth stages of rice. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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16 pages, 4333 KB  
Article
Integrated Transcriptomic and Metabolomic Analyses Implicate Key Genes and Metabolic Pathways in Maize Lodging Resistance
by Chunlei Xue, Haiyan Wu, Xuting Zhang, Fengcheng Sun, Sainan Zhang, Zhonghao Yu, Qi Dong, Yanan Liu, Hailong Zhang, Qing Ma and Liming Wang
Agriculture 2025, 15(23), 2416; https://doi.org/10.3390/agriculture15232416 - 24 Nov 2025
Cited by 1 | Viewed by 377
Abstract
Maize stalk lodging causes substantial yield losses worldwide. Although stalk strength is a genetically determined trait, its molecular mechanisms—particularly the dynamic changes during key developmental stages—remain inadequately characterized due to limitations of single-omics approaches. This study employed an integrated transcriptomic and metabolomic analysis [...] Read more.
Maize stalk lodging causes substantial yield losses worldwide. Although stalk strength is a genetically determined trait, its molecular mechanisms—particularly the dynamic changes during key developmental stages—remain inadequately characterized due to limitations of single-omics approaches. This study employed an integrated transcriptomic and metabolomic analysis strategy to compare stalk tissues from three maize genotypes with contrasting lodging resistance: the highly resistant inbred line PHB1M, the susceptible inbred line Chang 7-2, and their recombinant inbred line 23NWZ561 (abbreviated as P, C, and Z, respectively). Dynamic sampling of all three genotypes was conducted at both grain-filling and maturity stages, with simultaneous measurement of physiological traits related to stalk strength. Phenotypic analysis revealed that the resistant genotype PHB1M exhibited superior rind penetration strength, cell wall composition (cellulose, hemicellulose, and lignin) content, and vascular bundle development. Multi-omics analysis indicated that the molecular basis of lodging resistance is primarily established during the maturity stage. The transcriptomic and metabolomic profiles of the recombinant inbred line Z shifted from clustering with the susceptible parent C at the grain-filling stage to grouping with the resistant parent P at maturity. Key pathways including phenylpropanoid biosynthesis were significantly enriched specifically at maturity, accompanied by upregulation of related genes (PAL, HCT, CCR) and accumulation of metabolites such as lignin precursors in PHB1M. Integrated analysis identified a core co-expression network within the phenylpropanoid pathway comprising three genes and three metabolites. This study systematically demonstrates that lodging resistance in maize is regulated by transcriptional and metabolic reprogramming during late stalk developmental stages, particularly at maturity, where enhanced activation of the phenylpropanoid biosynthesis pathway plays a central role. These findings provide valuable candidate genes and metabolic markers for breeding lodging-resistant maize varieties. Full article
(This article belongs to the Special Issue Crop Yield Improvement in Genetic and Biology Breeding)
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20 pages, 8079 KB  
Article
How Do Spectral Scales and Machine Learning Affect SPAD Monitoring at Different Growth Stages of Winter Wheat?
by Xueqing Zhu, Jun Li, Yali Sheng, Weiqiang Wang, Haoran Wang, Hui Yang, Ying Nian, Jikai Liu and Xinwei Li
Agriculture 2025, 15(23), 2410; https://doi.org/10.3390/agriculture15232410 - 22 Nov 2025
Viewed by 386
Abstract
Chlorophyll serves as a crucial indicator for crop growth monitoring and reflects the health status of crops. Hyperspectral remote sensing technology, leveraging its advantages of repeated observations and high-throughput analysis, provides an effective approach for non-destructive chlorophyll monitoring. However, determining the optimal spectral [...] Read more.
Chlorophyll serves as a crucial indicator for crop growth monitoring and reflects the health status of crops. Hyperspectral remote sensing technology, leveraging its advantages of repeated observations and high-throughput analysis, provides an effective approach for non-destructive chlorophyll monitoring. However, determining the optimal spectral scale remains the primary bottleneck constraining the widespread application of hyperspectral remote sensing in crop chlorophyll estimation: excessively fine spectral scale readily introduces redundant information, leading to dramatically increased data dimensions and reduced computational efficiency; conversely, overly coarse spectral scale risks losing critical spectral features such as absorption peaks and reflection troughs, thereby compromising model accuracy. Therefore, establishing an appropriate spectral scale that effectively preserves spectral feature information while maintaining computational efficiency is crucial for enhancing the accuracy and practicality of chlorophyll remote sensing estimation. To address this, this study proposes a three-dimensional analytical framework integrating “spectral scale—machine learning algorithm—crop growth stage” to systematically solve the scale optimization problem. Ground-truth measurements and hyperspectral data from five growth stages of winter wheat in Fengyang County, Anhui Province, were collected. Spectral bands sensitive to chlorophyll were analyzed, and four modeling methods—Ridge Regression (RR), K-Nearest Neighbors (KNN), Random Forest (RF), and Support Vector Regression (SVR)—were employed to integrate data from different spectral scales with respective bandwidths of 2, 3, 5, 7, 10, 20, and 50 nanometers (nm). The results evaluated the response characteristics of raw band reflectance to chlorophyll values and its impact on machine learning-based chlorophyll estimation across different spectral scales. Results indicate: (1) Canopy spectra significantly correlated with winter wheat chlorophyll primarily reside in the red and red-edge bands; (2) For single-scale analysis, larger spectral scales (10, 20 nm) enhance monitoring accuracy compared to 1 nm high-resolution data, while medium and small scales (5, 7 nm) may degrade accuracy due to redundant noise introduction. (3) Integrating growth stages, spectral scales, and machine learning revealed optimal monitoring accuracy during the jointing and heading stages using 1–5 nm spectral scales combined with the KNN algorithm. For the booting, flowering, and grain filling stages, the highest accuracy was achieved using 20–50 nm spectral scales combined with either the KNN or RF algorithm. The results indicate that high-precision chlorophyll inversion for winter wheat does not rely on a single fixed model or scale, but rather on the dynamic adaptation of the “scale-model-growth stage” triad. The proposed systematic framework not only provides a theoretical basis for chlorophyll monitoring using multi-platform remote sensing data, but also offers methodological support for future crop-sensing sensor design and data processing strategy optimization. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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28 pages, 10262 KB  
Article
Characteristics of Grouting-Induced Microfractures in Fractured Rock Masses: Numerical Simulation, Microseismic Monitoring, and Laboratory Tests
by Qiukai Gai, Lei Huang, Shiqi Liu, Qiang Fu, Xiaoding Xu, Jia Wang, Xingxing Zhang, Chao Chen and Chuanjiu Zhang
Processes 2025, 13(12), 3768; https://doi.org/10.3390/pr13123768 - 21 Nov 2025
Viewed by 410
Abstract
In deep mining engineering, grouting operations, although designed for reinforcement, inevitably induce microfracturing and associated microseismicity. Investigating the characteristics of grouting-induced microfractures in fractured rock masses is crucial for evaluating the grouting process and its effectiveness. Using the Wutongzhuang Mine as a case [...] Read more.
In deep mining engineering, grouting operations, although designed for reinforcement, inevitably induce microfracturing and associated microseismicity. Investigating the characteristics of grouting-induced microfractures in fractured rock masses is crucial for evaluating the grouting process and its effectiveness. Using the Wutongzhuang Mine as a case study, this paper first establishes mechanical criteria covering three stages—fracture filling, coupled permeation, and fracturing propagation—to analyze the process characteristics of grouting-induced microfractures. It reveals the mechanisms by which grouting pressure, in situ stress, and rock mass strength control fracture initiation and propagation. Furthermore, a grouting simulation method based on the Particle Flow Code (PFC) is proposed and summarized, constructing a “pipe-domain” fluid network considering fluid–solid coupling, thereby achieving a refined numerical reproduction of the entire grouting process. Addressing the complex geological conditions of the mine, three typical grouting modes are simulated and analyzed: grouting under conventional geological conditions, grouting under densely fractured conditions, and grouting near fault structures. The simulation results unveil their core influencing factors and behavioral characteristics: under conventional conditions, microfractures exhibit a “three-stage” evolution with the grouting process; under densely fractured conditions, the density of pre-existing fractures dominates the formation of complex fracture networks; and finally, fault structures guide fracture propagation, causing microfractures to cluster nearby. Subsequently, the development trends of microfractures under different grouting effects are clarified: after effective reinforcement, the rock mass strength increases, and the scope and quantity of fractures induced by subsequent grouting significantly decrease. The behavioral patterns under these different grouting modes are effectively validated through field microseismic monitoring, confirming the intrinsic relationship between the spatio-temporal evolution of grouting-induced microfractures and geological structures/grouting techniques. Finally, laboratory tests are conducted using a self-developed experimental apparatus, selecting grouting pressure, pore water pressure in the rock mass, and matrix grain size as variables. The mapping relationships between these variables and microseismic waveform characteristics, amplitude, etc., under different schemes are obtained, providing a basis for inverting the microfracturing process and evaluating grouting effectiveness. The research results provide multi-faceted references for characterizing the stability of fractured rock masses via microseismic monitoring and for optimizing grouting effectiveness. Full article
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19 pages, 1965 KB  
Article
RGB-Derived Indices Accurately Detect Genotypic and Agronomic Differences in Canopy Variation in Durum Wheat
by Fabio Fania, Ivano Pecorella, Elio Romano, Patrizio Spadanuda, Nicola Pecchioni, Salvatore Esposito and Pasquale De Vita
Crops 2025, 5(6), 85; https://doi.org/10.3390/crops5060085 - 19 Nov 2025
Viewed by 417
Abstract
Durum wheat (Triticum turgidum ssp. durum) represents a strategic crop for the Mediterranean basin and global semiarid regions, being the raw material for pasta and a key component of sustainable cereal production. Improving early vigor and canopy development is essential to enhance [...] Read more.
Durum wheat (Triticum turgidum ssp. durum) represents a strategic crop for the Mediterranean basin and global semiarid regions, being the raw material for pasta and a key component of sustainable cereal production. Improving early vigor and canopy development is essential to enhance resource-use efficiency and yield stability under variable agronomic conditions. For these reasons, we report the application of a series of RGB-derived vegetation indices (VIs) from Unmanned Aerial Vehicle (UAVs) to evaluate their effectiveness in capturing canopy variation in the early growth stages in a large collection of durum wheat varieties and on their validation under different agronomic managements. Digital RGB images from seedling emergence to grain filling were taken in two field experiments, and RGB-based indices were calculated over four consecutive growing seasons. In the first experiment, 521 durum wheat varieties were evaluated, showing highly significant genotypic differences for all VIs (p < 0.001) and explaining up to 72% of the phenotypic variance at the end of tillering. In addition, TGI explained more variation than CSI when recorded at the end of the tillering stage. In the second experiment, two contrasting genotypes managed under two sowing rates and six nitrogen (N) treatments displayed a strong discriminating capacity of NGRDI and TGI for genotype and sowing density (η2 = 0.50). These results highlight the potential use of RGB-derived VIs for high-throughput phenotypic selection of soil coverage ability in durum wheat, even under different agronomic conditions. Full article
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21 pages, 3250 KB  
Article
Nitrogen and Water Regulate the Soil Microbial Carbon Cycle in Wheat Fields Primarily via the Pentose Phosphate Pathway
by Qingmin Ma, Bisheng Wang, Quanxiao Fang, Zhongqing Zhao, Yusha Cui and Xiaolu Sun
Agronomy 2025, 15(11), 2629; https://doi.org/10.3390/agronomy15112629 - 16 Nov 2025
Viewed by 408
Abstract
To clarify how nitrogen (N) and water regulate the microbe mediated carbon (C) cycle in farmland, a 3-year experiment was conducted in a wheat–maize rotation at Jiaozhou Station, North China. Twelve treatments combined four drip irrigation regimes (T1: no irrigation; T2: 40 mm [...] Read more.
To clarify how nitrogen (N) and water regulate the microbe mediated carbon (C) cycle in farmland, a 3-year experiment was conducted in a wheat–maize rotation at Jiaozhou Station, North China. Twelve treatments combined four drip irrigation regimes (T1: no irrigation; T2: 40 mm irrigation at flowering; T3: 40 mm irrigation at the grain filling stage; T4: both, 40 mm each) and three N levels (N0: 0 kgN·hm−2; N1: 92 kgN·hm−2; N2: 184 kgN·hm−2). In this study, we measured wheat yield and biomass, soil organic carbon and nitrogen content, soil respiration, soil microbial community, and C-metabolic genes. The results showed that wheat yield increased with N, peaking at 8949.81 kg·hm−2 in the N2T3 treatment, while irrigation had no significant independent effect on yield but interacted with nitrogen fertilization: under identical nitrogen levels (N1, N2), yields in the T1 and T2 treatments were significantly lower than those in the T3/T4 treatments. The soil organic carbon content in N2 was significantly higher; the soil C/N ratio was highest in N2, and T3 resulted in a significantly higher C/N ratio than T1 under the same N level; total soil respiration in N0 was significant lower, and T4 had higher respiration than T2 under the same N level. N addition increased Actinobacteriota, Chloroflexi, Gemmatimonadetes, and Ascomycota, while decreaing Proteobacteria and Acidobacteriota. No reduction in fungal phylum was observed with nitrogen addition. N application significantly upregulated key enzymes in the pentose phosphate pathway (e.g., transketolase K00615, transaldolase K00616), while irrigation increased phosphoserine aminotransferase (K00831) abundance and decreased methylmalonyl-CoA mutase (K01848) abundance. N2T3 maintains high SOC content while achieving maximum yield, promoting soil fertility retention. Compared to T4, N2T3 also enhances water use efficiency. The N2T3 treatment (high N and grain filling stage irrigation) achieved the optimal balance between high wheat yield and SOC sequestration. Full article
(This article belongs to the Section Water Use and Irrigation)
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17 pages, 11796 KB  
Article
Mineralogical, Gemological Characteristics and Petrogenesis of High-Quality Maw-Sit-Sit Jade from the Myanmar Jade Belt
by Yu Zhang, Guanghai Shi and Jiabao Wen
Crystals 2025, 15(11), 983; https://doi.org/10.3390/cryst15110983 - 14 Nov 2025
Viewed by 791
Abstract
Maw-sit-sit jade resembles kosmochlor-jadeitite in appearance and is spatially associated with it in the Myanmar Jade Belt. However, the mineral composition, microstructure, and petrogenesis of this type of jade remain unclear. To address this gap, this study investigated high-quality Maw-sit-sit jade using a [...] Read more.
Maw-sit-sit jade resembles kosmochlor-jadeitite in appearance and is spatially associated with it in the Myanmar Jade Belt. However, the mineral composition, microstructure, and petrogenesis of this type of jade remain unclear. To address this gap, this study investigated high-quality Maw-sit-sit jade using a range of analytical techniques, including conventional gemological tests, infrared spectroscopy, petrographic observations, electron probe microanalysis (EPMA), and backscattered electron (BSE) imaging. Results show that Maw-sit-sit jade primarily consists of albite and chromium-omphacite, with minor amphibole (eckermannite and richterite). Jadeite and relict chromite are absent in the studied samples. Its high albite content gives it lower refractive index (RI: 1.55–1.56) and specific gravity (SG: 2.69–2.73) compared to kosmochlor-jadeitite and jadeite jade. Additionally, Maw-sit-sit jade exhibits punctate or banded fluorescence under ultraviolet (UV) light, distinguishing it from kosmochlor-jadeitite and jadeite jade (both inert). Petrographically, euhedral albite fills interstices between early-formed Cr-omphacite and eckermannite, which is textural evidence of its late-stage origin. Eckermannite and Cr-omphacite occur as enclosed grains with embayed boundaries and dissolution pores, indicating they experienced mechanical disruption and chemical dissolution during subsequent geological processes. Petrogenetically, Maw-sit-sit jade (defined as “Cr-omphacite-albitite”) forms via a two-stage process: (1) Under high-pressure/low-temperature (HP/LT) conditions in the subduction zone, Na-Al-Si-rich fluids metasomatize chromite-bearing serpentinite protoliths, generating an early assemblage of jadeite, Cr-omphacite and amphiboles; (2) During subsequent plate exhumation and decompression, jadeite underwent retrograde metamorphism under low-pressure/low-temperature (LP/LT) conditions involving residual Na-Al-Si fluids, resulting in the formation of albite. This process led to the replacement of early-formed minerals by euhedral albite, ultimately generating the Ab+Cr-Omp+Eck symplectic texture. This study elucidates the mineralogical, gemological identity and petrogenesis of high-quality Maw-sit-sit jade, advancing our understanding of fluid evolution within a subduction zone. Full article
(This article belongs to the Section Mineralogical Crystallography and Biomineralization)
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26 pages, 7206 KB  
Article
Winter Wheat-Yield Estimation in the Huang-Huai-Hai Region Based on KNN-Ward Phenological Zoning and Multi-Source Data
by Qiang Wu, Xiaoyu Song, Jie Zhang, Yuanyuan Ma, Chunkai Zheng, Tuo Wang and Guijun Yang
Remote Sens. 2025, 17(22), 3686; https://doi.org/10.3390/rs17223686 - 11 Nov 2025
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Abstract
Phenology is a key factor influencing the accuracy of regional-scale winter wheat-yield estimation. This study proposes a yield-estimation modeling framework centered on phenological zoning. Based on the remote sensing monitoring results of the heading stage of winter wheat in the Huang-Huai-Hai region from [...] Read more.
Phenology is a key factor influencing the accuracy of regional-scale winter wheat-yield estimation. This study proposes a yield-estimation modeling framework centered on phenological zoning. Based on the remote sensing monitoring results of the heading stage of winter wheat in the Huang-Huai-Hai region from 2016 to 2021, the KNN-Ward spatial constraint clustering method was adopted to divide the Huang-Huai-Hai region into four consecutive wheat phenological zones. The results indicate a consistent spatio-temporal gradient in the phenology of winter wheat across the Huang-Huai-Hai region, characterized by later development in the northern areas and earlier development in the southern areas. The median day of year (DOY) for the heading stage in each zone varies by approximately 4 to 5 days, demonstrating a high degree of interannual stability. Building upon the phenological zoning outcomes, a multi-source data-driven random forest model was developed for wheat-yield estimation by integrating remote sensing data and meteorological variables during the wheat grain filling stage. This model incorporates remote sensing vegetation indices, crop growth parameters, and climatic factors as key input variables. Results show that the phenological zoning strategy significantly improves model prediction performance. Compared with the non-zoning model (R2 = 0.46, RRMSE = 13.02%), the phenological zone model shows strong performance under leave-one-year-out cross-validation, with R2 ranging from 0.54 to 0.68 and RRMSE below 12.50%. The phenological zoning model also exhibits more uniform residuals and higher prediction stability than models based on non-zoning, traditional agricultural zoning, and provincial administrative zoning. These results confirm the effectiveness of phenology-based zoning for regional yield estimation and provide a reliable framework for fine-scale crop yield monitoring. The phenological zoning model also demonstrates superior residual uniformity and prediction stability compared with models based on non-zoning, traditional agricultural zoning, and provincial administrative zoning. These results confirm the effectiveness of the multi-factor-driven modeling framework based on crop phenological zoning for regional yield estimation, providing a robust methodological foundation for fine-scale yield monitoring at the regional level. Full article
(This article belongs to the Section Remote Sensing in Agriculture and Vegetation)
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16 pages, 2935 KB  
Article
Responses of Photosynthetic Activity in Flag Leaves and Spikes as well as Seed Development of Wheat (Triticum aestivum L.) to Artificial Shading
by Kieun Song, Sesil Hong and Sangin Shim
Agronomy 2025, 15(11), 2577; https://doi.org/10.3390/agronomy15112577 - 9 Nov 2025
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Abstract
The accumulation of photoassimilates in the sinks during the grain filling stage is affected by the conditions of the various source organs. This study was conducted to investigate changes in various source and sink organs when the flag leaves and spikes were shaded [...] Read more.
The accumulation of photoassimilates in the sinks during the grain filling stage is affected by the conditions of the various source organs. This study was conducted to investigate changes in various source and sink organs when the flag leaves and spikes were shaded from heading to harvest in wheat. Shading the flag leaves increased chlorophyll content and chlorophyll fluorescence in the uppermost leaves by 34.9% and 0.3% in 2022 and 75.3% and 3.3% in 2023, respectively, maintaining a relatively high photosynthetic rate from heading to the mid-grain filling stage. However, shading the spikes had a more substantial negative impact on spike growth than the flag leaf shading. On the other hand, the uppermost leaves continued to serve as a source more actively even when the flag leaves were shaded, implying a compensating effect. At 35 days after treatment (DAT), the relative water content (RWC) of the spike in the spike shading (SS) treatment was 19.4% and 49.7% higher than that of the control in 2022 and 2023, respectively. However, grain weight in the SS treatment decreased by 39.7% in 2022 and 5.3% in 2023 compared with the control. In the flag leaf shading (FS) treatment, grain weight declined by 3.5% and 6.2% in 2022 and 2023, respectively. These results indicate that the reduction in grain weight due to shading was less pronounced in the SS treatment than in the FS and combined flag leaf and spike shading (FSS) treatments. The results suggest that spikes play a buffering role when assimilate-transport functions decline in the source organs. Our results provide a better understanding of the architectural properties, including flag leaf, spike, and the uppermost leaf, for photosynthetic contribution to grain filling in wheat. Also, identifying target characteristics for improving photosynthetic source organs will be valuable for developing wheat varieties with high yield stability. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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14 pages, 1884 KB  
Article
Effects of Foliar Application of Paclobutrazol on Grain Yield, Aroma, and Canopy Radiation Use Efficiency of Aromatic Rice
by Fengqin Hu, Jian Lu, Laiyuan Zhai, Xianjin Qiu, Bin Du and Jianlong Xu
Biology 2025, 14(11), 1562; https://doi.org/10.3390/biology14111562 - 7 Nov 2025
Viewed by 502
Abstract
Paclobutrazol (PBZ) is extensively used to modulate plant architecture in rice. However, its comprehensive effects on grain yield and aroma in aromatic rice have not been thoroughly investigated. This study used the local aromatic rice cultivars (Meixiangzhan 2 and Xiangyaxiangzhan) as experimental materials [...] Read more.
Paclobutrazol (PBZ) is extensively used to modulate plant architecture in rice. However, its comprehensive effects on grain yield and aroma in aromatic rice have not been thoroughly investigated. This study used the local aromatic rice cultivars (Meixiangzhan 2 and Xiangyaxiangzhan) as experimental materials to evaluate the impacts of foliar-applied PBZ at three concentrations (0 (CK), 150 (T1), and 300 (T2) mg L−1) on grain yield, photosynthetic characteristics, fragrance formation, and radiation use efficiency (RUE). Field experiments revealed that T1 significantly reduced the leaf area index (LAI) by 10.12% and intercepted photosynthetically active radiation (IPAR) by 10.74%, meanwhile significantly increasing SPAD values by 12.94% and net photosynthetic rate (Pn) by 9.95%, leading to improved RUE up to 25.21%. These changes contributed to a larger number of grains per panicle and increased 1000-grain weight, ultimately enhancing grain yield. In contrast, T2 resulted in a sharp reduction by 24.84% in IPAR and a significant decline in Pn by 10.07% during the late grain-filling stage, thus limiting the supply of photosynthetic assimilates, eventually reducing grain yield. PBZ application also significantly elevated 2-acetyl-1-pyrroline (2-AP) content by 28.74% under T1 and 17.51% under T2, compared to the control. The increase in 2-AP was mainly associated with elevated levels of key precursors, including proline, Δ1-pyrroline-5-carboxylic acid, and Δ1-pyrroline. In spite of differences in traits between cultivars, the traits responded to PBZ in the same pattern. These results indicate that foliar application of PBZ at 150 mg L−1 can effectively improve both yield and aroma of aromatic rice, offering a promising cultivation strategy for high-quality aromatic rice production. Full article
(This article belongs to the Section Plant Science)
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