Search Results (673)

One hundred presumptive Pseudomonas isolates, recovered from 15 sites impacted by anthropogenic activity in the Foggia district (Italy), were screened for key adaptive and functional traits important for environmental applications. The isolates were phenotypically characterized for their ability to grow under combined pH (5.0–8.0) and temperature (15–37 °C) conditions, to produce proteolytic enzymes, pigments, and exopolysaccharides, and to tolerate SDS. Moreover, the resistance to six environmentally relevant heavy metals (Cd, Co, Cu, Ni, Zn, As) was qualitatively assessed. The results highlighted wide inter-strain variability, with distinct clusters of isolates showing unique combinations of stress tolerance, enzymatic potential, and resistance profile. PERMANOVA analysis revealed significant effects of both the isolation site and the metal type, as well as their interaction, on the observed resistance patterns. A subset of isolates showed co-tolerance to elevated temperatures and heavy metals. These findings offer an initial yet insightful overview of the adaptive diversity of soil-derived Pseudomonas, laying the groundwork for the rational selection of strains for bioaugmentation in contaminated soils. Full article

This study analyzed the heavy metal tolerance and chromium reduction and the potential of plant growth to promote Rhizobium sp. OS-1. By genetic makeup, the Rhizobium strain is nitrogen-fixing and phosphate-solubilizing in metal-contaminated agricultural soil. Among the Rhizobium group, bacterial strain OS-1 showed a significant tolerance to heavy metals, particularly chromium (900 µg/mL), zinc (700 µg/mL), and copper. In the initial investigation, the bacteria strains were morphologically short-rod, Gram-negative, appeared as light pink colonies on media plates, and were biochemically positive for catalase reaction and the ability to ferment glucose, sucrose, and mannitol. Further, bacterial genomic DNA was isolated and amplified with the 16SrRNA gene and sequencing; the obtained 16S rRNA sequence achieved accession no. HE663761.1 from the NCBI GenBank, and it was confirmed that the strain belongs to the Rhizobium genus by phylogenetic analysis. The strain’s performance was best for high hexavalent chromium [Cr(VI)] reduction at 7–8 pH and a temperature of 30 °C, resulting in a total decrease in 96 h. Additionally, the adsorption isotherm Freundlich and Langmuir models fit best for this study, revealing a large biosorption capacity, with Cr(VI) having the highest affinity. Further bacterial chromium reduction was confirmed by an enzymatic test of nitro reductase and chromate reductase activity in bacterial extract. Further, from the metal biosorption study, an Artificial Neural Network (ANN) model was built to assess the metal reduction capability, considering the variables of pH, temperature, incubation duration, and initial metal concentration. The model attained an excellent expected accuracy (R² > 0.90). With these features, this bacterial strain is excellent for bioremediation and use for industrial purposes and agricultural sustainability in metal-contaminated agricultural fields. Full article

Plant functional traits serve as vital tools for understanding vegetation adaptation mechanisms in changing environments. As the primary organs for nutrient acquisition from soil, fine roots are highly sensitive to environmental variations. However, current research on fine-root adaptation strategies predominantly focuses on tropical, subtropical, and temperate forests, leaving a significant gap in comprehensive knowledge regarding fine-root responses in rocky-desertification habitats. This study investigates the fine roots of Pseudotsuga sinensis across varying degrees of rocky desertification (mild, moderate, severe, and extremely severe). By analyzing fine-root morphological and nutrient traits, we aim to elucidate the trait differences and correlations under different desertification intensities. The results indicate that root dry matter content increases significantly with escalating desertification severity. Fine roots in mild and extremely severe desertification exhibit notably higher root C, K, and Mg concentrations compared to those in moderate and severe desertification, while root Ca concentration shows an inverse trend. Our correlation analyses reveal a highly significant positive relationship between specific root length and specific root area, whereas root dry matter content demonstrates a significant negative correlation with elemental concentrations. The principal component analysis (PCA) further indicates that the trait associations adopted by the forest in mild- and extremely severe-desertification environments are different from those in moderate- and severe-desertification environments. This study did not account for soil nutrient dynamics, microbial diversity, or enzymatic activity—key factors influencing fine-root adaptation. Future research should integrate root traits with soil properties to holistically assess resource strategies in rocky-desertification ecosystems. This study can serve as a theoretical reference for research on root characteristics and adaptation strategies of plants in rocky-desertification habitats. Full article

Eco-enzymatic stoichiometry provides a basis for understanding soil ecosystem functions, with implications for land management and ecological protection. Long-term climatic factors and human interferences have caused significant land-use transformations in the Qinghai–Tibet Plateau region, affecting various ecological functions, such as soil nutrient cycling and chemical element balance. It is currently unclear how large-scale land-use conversion affects soil ecological stoichiometry. In this study, 763 soil samples were collected across three land-use types: farmland, grassland, and forest land. In addition, changes in soil physicochemical properties and enzyme activity and stoichiometry were determined. The soil available phosphorus (SAP) and total phosphorus (TP) concentrations were the highest in farmland soil. Bulk density, pH, SAP, TP, and NO₃⁻-N were lower in forest soil, whereas NH₄⁺-N, available nitrogen, soil organic carbon (SOC), available potassium, and the soil nutrient ratio increased. Land-use conversion promoted soil β-1,4-glucosidase, N-acetyl-β-glucosaminidase, and alkaline phosphatase activities, mostly in forest soil. The eco-enzymatic C:N ratio was higher in farmland soils but grassland soils had a higher enzymatic C:P and N:P. Soil microorganisms were limited by P nutrients in all land-use patterns. C limitation was the highest in farmland soil. The redundancy analysis indicated that the ecological stoichiometry in farmland was influenced by TN, whereas grass and forest soils were influenced by SOC. Overall, the conversion of cropland or grassland to complex land-use types can effectively enhance soil nutrients, enzyme activities, and ecosystem functions, providing valuable insights for ecological restoration and sustainable land management in alpine regions. Full article

Integrated rice–crayfish (Oryza sativa–Procambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects of the RC systems on soil physicochemical characteristics and microbial dynamics in paddy fields of southern Henan Province, China, over the 2023 growing season and subsequent fallow period. Using a randomized complete design, rice monoculture (RM, as the control) and RC treatments were compared across replicated plots. Soil and water samples were collected post-harvest and pre-transplanting to assess soil properties, extracellular enzyme activity, and microbial community structure. Results showed that RC significantly enhanced soil moisture by up to 30.2%, increased soil porosity by 9.6%, and nearly tripled soil organic carbon compared to RM. The RC system consistently elevated nitrogen (N), phosphorus (P), and potassium (K) throughout both the rice growth and fallow stages, indicating improved nutrient availability and retention. Elevated extracellular enzyme activities linked to carbon, N, and P cycling were observed under RC, with enzymatic stoichiometry revealing increased microbial nutrient limitation intensity and a shift toward P limitation. Microbial community composition was significantly altered under RC, showing increased biomass, a higher fungi-to-bacteria ratio, and greater relative abundance of Gram-positive bacteria, reflecting enhanced soil biodiversity and ecosystem resilience. Further analyses using the Mantel test and Random Forest identified extracellular enzyme activities, PLFAs, soil moisture, and bulk density as major factors shaping microbial communities. Redundancy analysis (RDA) confirmed that total potassium (TK), vector length (VL), soil pH, and total nitrogen (TN) were the strongest environmental predictors of microbial variation, jointly explaining 74.57% of the total variation. Our findings indicated that RC improves soil physicochemical conditions and microbial function, thereby supporting sustainable nutrient cycling and offering a promising, environmentally sound strategy for enhancing productivity and soil health in rice-based agro-ecosystems. Full article

Elevational gradients in temperature, moisture, and vegetation strongly influence soil nutrient content and stoichiometry in mountainous regions. However, exactly how total, microbial, and enzymatic carbon (C), nitrogen (N), and phosphorus (P) stoichiometry vary with elevation in karst peak-cluster depressions remains poorly understood. To address this, we studied soil total, microbial, and enzymatic C:N:P stoichiometry in seasonal rainforests within karst peak-cluster depressions in southwestern China at different elevations (200, 300, 400, and 500 m asl) and depths (0–20 and 20–40 cm). We found that soil organic carbon (SOC), total nitrogen (TN), and the C:P and N:P ratios increased significantly with elevation, whereas total phosphorus (TP) decreased. Microbial phosphorus (MBP) also declined with elevation, while the microbial N:P ratio rose. Activities of nitrogen- (β-N-acetylglucosaminidase and L-leucine aminopeptidase combined) and phosphorus-related enzymes (alkaline phosphatase) increased markedly with elevation, suggesting potential phosphorus limitation for plant growth at higher elevations. Our results suggest that total, microbial, and enzymatic soil stoichiometry are collectively shaped by topography and soil physicochemical properties, with elevation, pH, and exchangeable calcium (ECa) acting as the key drivers. Microbial stoichiometry exhibited positive interactions with soil stoichiometry, while enzymatic stoichiometry did not fully conform to the expectations of resource allocation theory, likely due to the functional specificity of phosphatase. Overall, these findings enhance our understanding of C–N–P biogeochemical coupling in karst ecosystems, highlight potential nutrient limitations, and provide a scientific basis for sustainable forest management in tropical karst regions. Full article

Soil erosion-prone areas require effective microbial treatments to improve soil bacterial communities and functional traits. Understanding the driving effects of different microbial interventions on soil ecology is essential for restoration efforts. Single and combined microbial treatments were applied to soil. Bacterial community structure was analyzed via 16S IRNA high-throughput sequencing, and functional groups were predicted using FAPROTAX. Soil microbial carbon, nitrogen, metabolic entropy, and enzymatic activity were assessed. Microbial Carbon and Metabolic Activity: The Arbuscular mycorrhizal fungi (AMF) and Bacillus mucilaginosus (BM) (AMF.BM) treatment exhibited the highest microbial carbon content and the lowest metabolic entropy. The microbial carbon-to-nitrogen ratio ranged from 1.27 to 3.69 across all treatments. Bacterial Community Composition: The dominant bacterial phyla included Firmicutes, Proteobacteria, Acidobacteria, Bacteroidetes, and Actinobacteria. Diversity and Richness: The AMF and Trichoderma harzianum (TH) (AMF.TH) treatment significantly reduced diversity, richness, and phylogenetic diversity indices, while the AMF.BM treatment showed a significantly higher richness index (p < 0.05). Relative Abundance of Firmicutes: Compared to the control, the AMF, TH.BM, and TH treatments decreased the relative abundance of Firmicutes, whereas the AMF.TH treatment increased their relative abundance. Environmental Correlations: Redundancy and correlation analyses revealed significant correlations between soil organic matter, magnesium content, and sucrase activity and several major bacterial genera. Functional Prediction: The AMF.BM treatment enhanced the relative abundance and evenness of bacterial ecological functions, primarily driving nitrification, aerobic ammonia oxidation, and ureolysis. Microbial treatments differentially influence soil bacterial communities and functions. The AMF.BM combination shows the greatest potential for ecological restoration in erosion-prone soils. Full article

This study evaluates the agronomic and environmental performance of pelletized compost derived from olive mill waste as a sustainable alternative to mineral fertilizers for cultivating wheat (Triticum turgidum L.) under conventional tillage methods. A field experiment was conducted in semi-arid Spain, employing three fertilization strategies: inorganic (MAP + Urea), sewage sludge (SS), and organic compost pellets (OCP), each providing 150 kg N ha⁻¹. The parameters analyzed included wheat yield, grain quality, soil properties, and greenhouse gas (GHG) emissions. Inorganic fertilization yielded the highest productivity and nutrient uptake. However, the OCP treatment reduced grain yield by only 15%, while improving soil microbial activity and enzymatic responses. The SS and OCP treatments showed increased CO₂ and N₂O emissions compared to the control and inorganic plots. However, the OCP treatment also acted as a CH₄ sink. Nutrient use efficiency was greatest under mineral fertilization, though the OCP treatment outperformed the SS treatment. These results highlight the potential of OCP as a circular bio-based fertilizer that can enhance soil function and partially replace mineral inputs. Optimizing application timing is critical to aligning nutrient release with crop demand. Further long-term trials are necessary to evaluate their impact on the soil and improve environmental outcomes. Full article

A field experiment in growing spring wheat (Triticum aestivum L.—cv. ‘Monsun’) under organic, integrated and conventional farming systems was conducted over the period of 2020–2022 at the Czesławice Experimental Farm (Lubelskie Voivodeship, Poland). The first experimental factor analyzed was the farming system: A. organic system (control)—without the use of chemical plant protection products and NPK mineral fertilization; B. conventional system—the use of plant protection products and NPK fertilization in the range and doses recommended for spring wheat; C. integrated system—use of plant protection products and NPK fertilization in an “economical” way—doses reduced by 50%. The second experimental factor was irrigation strategy: 1. no irrigation—control; 2. double irrigation; 3. multiple irrigation The aim of the research was to determine the physical, chemical, and enzymatic properties of loess soil under spring wheat crops as influenced by the factors listed above. The highest organic C content of the soil (1.11%) was determined in the integrated system with multiple irrigation of spring wheat, whereas the lowest one (0.77%)—in the conventional system without irrigation. In the conventional system, the highest contents of total N (0.15%), P (131.4 mg kg⁻¹), and K (269.6 mg kg⁻¹) in the soil were determined under conditions of multiple irrigation. In turn, the organic system facilitated the highest contents of Mg, B, Cu, Mn, and Zn in the soil, especially upon multiple irrigation of crops. It also had the most beneficial effect on the evaluated physical parameters of the soil. In each farming system, the multiple irrigation of spring wheat significantly increased moisture content, density, and compaction of the soil and also improved its total sorption capacity (particularly in the integrated system). The highest count of beneficial fungi, the lowest population number of pathogenic fungi, and the highest count of actinobacteria were recorded in the soil from the organic system. Activity of soil enzymes was the highest in the integrated system, followed by the organic system—particularly upon multiple irrigation of crops. Summing up, the present study results demonstrate varied effects of the farming systems on the quality and health of loess soil. From a scientific point of view, the integrated farming system ensures the most stable and balanced physicochemical and biological parameters of the soil due to the sufficient amount of nutrients supplied to the soil and the minimized impact of chemical plant protection products on the soil. The multiple irrigation of crops resulting from indications of soil moisture sensors mounted on plots (indicating the real need for irrigation) contributed to the improvement of almost all analyzed soil quality indices. Multiple irrigation generated high costs, but in combination with fertilization and chemical crop protection (conventional and integrated system), it influenced the high productivity of spring wheat and compensated for the incurred costs (the greatest profit). Full article

Urban forests provide essential ecosystem services, including improving soil health, sequestering carbon (C), and supporting biodiversity. However, the effects of anthropogenic litter and root management on soil biogeochemical processes in urban environments remain poorly understood. This study applied the Detritus Inputs and Removal Treatment (DIRT) framework to examine how aboveground and belowground organic inputs influence soil organic carbon (SOC), total nitrogen (TN), soil water content (SWC), and enzymatic activities in subtropical urban camphor tree forests in China. Six treatments were implemented: litter removal (LR), litter addition (LA), root exclusion (RE), combined litter and root removal (LR + RE), combined litter addition and root exclusion (LA + RE), and an undisturbed litter control (LC). The results showed that the LA treatment significantly enhanced SOC, TN, SWC, and key soil enzyme activities (protease, catalase, and urease) compared to the LC, highlighting the crucial role of litter in enhancing soil fertility and microbial functioning. These elevated enzyme activities suggest intensified microbial nutrient cycling and metabolic activity in response to organic matter inputs. In contrast, the combined LR + RE treatment reduced SOC and enzyme activities but unexpectedly increased TN, indicating disrupted nutrient cycling, possibly due to accelerated microbial nitrogen mineralization and decomposition of existing soil organic matter in the absence of fresh carbon inputs. The LA treatment also showed the highest carbon-to-nitrogen (C:N) ratio, reflecting a carbon-enriched environment that may favor long-term carbon stabilization. Additionally, SWC was most improved under the LA + RE treatment, suggesting its potential for enhancing soil moisture retention in urban settings. These findings underscore the complementary roles of litter and root inputs in maintaining soil health and biogeochemical balance in urban forests. The study provides insights into enzyme-mediated soil processes under varying organic input regimes and highlights the value of targeted organic matter management to enhance urban ecosystem services. Full article

Plant growth-promoting rhizobacteria (PGPR) have significant potential for enhancing soil quality and plant growth; however, their agricultural application is limited by challenges such as immobilization and desiccation vulnerability. Background: This study addressed PGPR solid formulation by applying JetCutter-assisted immobilization technology to PGPR strains isolated from the rhizosphere of hazelnut (Corylus avellana). Methods: Four immobilized PGPR strains were evaluated under controlled greenhouse conditions: Serratia proteamaculans, Pseudomonas mohnii, Pseudomonas baetica, and Bacillus safensis. Their effects on root development, gas exchange parameters, dissolved organic carbon (DOC), and soil enzymatic activities (phosphatase, urease, protease, and β-glucosidase) were assessed. Principal component analysis (PCA) was used to identify the top-performing strain. Results: Treatment with encapsulated bacteria resulted in a 27% increase in DOC compared to controls (p < 0.05), while phosphatase and urease activities increased by 35% and 28%, respectively. Root length and volume improved by 18% and 22%, respectively, with PCA identifying P. baetica as the most effective strain. Conclusions: Immobilized Gram-negative PGPR strains enhanced root development and soil biochemical activity in hazelnuts, whereas B. safensis enhanced photosynthesis but had minimal impact on soil properties. These results highlight functional differences and support the use of PGPR immobilization to promote early plant establishment. Full article

The hard-seed coat of Ormosia henryi significantly impedes germination efficiency in massive propagation, while conventional physical dormancy-breaking methods often result in compromised seed vigor, asynchronous seedling emergence, and diminished stress tolerance. Seed biopriming, an innovative technique involving the inoculation of beneficial microorganisms onto seed surfaces or into germination substrates, enhances germination kinetics and emergence uniformity through microbial metabolic functions and synergistic interactions with seed exudates. Notably, spermosphere-derived functional bacteria isolated from native spermosphere soil demonstrate superior colonization capacity and sustained bioactivity. This investigation employed selective inoculation of these indigenous functional strains to systematically analyze dynamic changes in endogenous phytohormones, enzymatic activities, and storage substances during critical germination phases, thereby elucidating the physiological mechanisms underlying biopriming-enhanced germination. The experimental results demonstrated significant improvements in germination parameters through biopriming. Inoculation with the Bacillus sp. strain achieved a peak germination rate (76.19%), representing a 16.19% increase over the control (p < 0.05). The biopriming treatment effectively improved the seed vigor, broke the impermeability of the seed coat, accelerated the germination speed, and positively regulated physiological indicators, especially amylase activity and the ratio of gibberellic acid to abscisic acid. This study establishes a theoretical framework for microbial chemotaxis and rhizocompetence in seed priming applications while providing an eco-technological solution for overcoming germination constraints in O. henryi cultivation. The optimized biopriming protocol addresses both low germination rates and post-germination growth limitations, providing technical support for the seedling cultivation of O. henryi. Full article

Replacing partial chemical fertilizers with organic fertilizer can increase organic carbon input, change soil nutrient stoichiometry and microbial metabolism, and then affect soil organic carbon (SOC) storage. A 6-year field experiment was used to explore the mechanism of SOC storage under different ratios of manure substitution in northeast China, with treatments including chemical fertilizer application alone (nitrogen, phosphorus, and potassium, NPK) and replacing 1/4 (1/4M), 2/4 (2/4M), 3/4 (3/4M), and 4/4 (4/4M) of chemical fertilizer N with manure N. Soil nutrients, enzymatic activity, and SOC fractions were analyzed to evaluate the effect of different manure substitution ratios on SOC storage. A high ratio of manure substitution (>1/4) significantly increased soil total N, total P, total K, and available nutrients (NO₃⁻-N, available P, and available K), and the 4/4M greatly decreased the C/N ratio compared to the NPK. Manure incorporation increased microbial biomass carbon (MBC) by 18.3–53.0%. Treatments with 50%, 75%, and 100% manure substitution (2/4M, 3/4M, and 4/4M) enhanced bacterial necromass carbon (BNC), fungal necromass carbon (FNC), and total microbial necromass carbon (MNC) by 31.9–63.5%, 25.5–107.1%, and 27.4–94.2%, respectively, compared to the NPK treatment. Notably, the increase in FNC was greater than that of BNC as the manure substitution ratio increased. The increasing manure substitution significantly enhanced particulate organic C (POC) and total SOC but did not affect mineral-associated organic C (MAOC). High soil N and P supplies decreased leucine aminopeptidases (LAPs) and alkaline phosphatase activities but increased the activity ratio of β-glucosidase (BG)/(N-acetyl-glucosaminidase (NAG) + LAP). Treatments with 25% manure substitution (1/4M) maintained maize and soybean yield, but with increasing manure rate, the maize yield decreased gradually. Overall, the high ratio of manure substitution enhanced SOC storage via increasing POC and MNC, and decreasing the decomposition potential of manure C and soil C resulting from low N- and P-requiring enzyme activities under high nutrient supplies. This study provides empirical evidence that the rational substitution of chemical fertilizers with manure is an effective measure to improve the availability of nutrients, and its effect on increasing crop yields still needs to be continuously observed, which is still a beneficial choice for enhancing black soil fertility. Full article

Invasive and native plants can coexist in the same ecosystem. Thus, the fallen leaves of invasive and native plants can be mixed, which can lead to co-decomposition. Invasive plants can create microenvironmental conditions conducive to their invasion process by influencing soil physicochemical properties, soil nutrient contents, and soil enzymatic activities through litter decomposition by released metabolites. Heavy metal contamination may affect the litter decomposition of invasive plants. This study was designed to elucidate the effects of the mono- and co-decomposition of the leaves of the invasive aquatic plant Eichhornia crassipes (Mart.) Solms (Common Water Hyacinth) and the native aquatic plant Nymphaea tetragona Georgi (Pygmy Water-Lily) on soil physicochemical properties, soil nutrient contents, and soil enzymatic activities under the mono- and co-contamination of Cu and Pb. This study was conducted over a six-month period using a polyethylene litter bag experiment. The type of heavy metals may be the most significant factor influencing the differences in the decomposition rate between E. crassipes and N. tetragona. The co-contamination of Cu and Pb increased the decomposition rate of the leaves of E. crassipes and the decomposition rate also increased as the invasion degree of E. crassipes increased relative to N. tetragona. The co-decomposition of the leaves of the two aquatic plants showed an antagonistic response under the mono-contamination of Pb and the control, but presented a synergistic response under the mono-contamination of Cu and the co-contamination of Cu and Pb, regardless of the invasion degree of E. crassipes. Soil enzymatic activities, especially the activities of polyphenol oxidase and cellulase, may be a significant factor influencing the litter decomposition of the two aquatic plants. Consequently, heavy metal contamination may affect the invasion process of E. crassipes with regard to the regulation of the released metabolites during the decomposition process, and this is specifically modulated by the type of heavy metals. Full article

This study evaluated the effect of soil and foliar fertilization with nitrogen (N), molybdenum (Mo), zinc (Zn), and their combination (Zn-Mo) on nutrition, enzymatic activity, photosynthetic pigments, and productive parameters in the Western Schley pecan tree. An orthogonal Taguchi L16 design was used with differentiated soil and foliar nitrate concentrations, reaching an average of 1557.7 mg kg⁻¹, and increasing up to 1907 mg kg⁻¹ depending on the fertilization dose. Nitrate reductase activity (NRNO₃⁻) significantly increased with N and Mo applications, reaching a maximum of 13.62 µmol. Among photosynthetic pigments, chlorophyll a was the only variable with a significant response, highlighting the role of Mo in its enhancement. Positive effects were also observed on pomological traits such as yield (up to 425 kg ha⁻¹), nut weight, and kernel percentage with increased doses of N and Mo. In conclusion, combined fertilization improved the nutritional status, physiological responses, and productivity of pecan trees, emphasizing the importance of balanced nutrient management to avoid nutritional antagonisms and to optimize both yield and fruit quality. Full article