Search Results (44)

Heavy metal contamination in coastal and ballast waters motivates the development of low-cost, environmentally compatible filtration media. This study investigates how 6 MeV electron-beam irradiation (0–100 Gy) modifies the surface electronic and chemical properties of quartz-rich Baltic Sea sands collected from four Latvian coastal locations (Riga, Salacgriva, Ventspils, and Liepaja), and how these modifications affect chromium removal from aqueous K₂CrO₄ solutions. Surface electronic behavior was evaluated by near-threshold photoelectron emission spectroscopy (PEES), including electron work function (EWF) and analysis of differentiated spectra, while irradiation-associated changes in near-surface chemistry were assessed by X-ray photoelectron spectroscopy (XPS). Filtration performance was quantified by UV–Vis absorbance of filtrates. Across all sands, EWF values remained within ~4.7–4.9 eV; however, irradiation effects were strongly site-dependent. Liepaja sand exhibited the most pronounced response, including an EWF increase at 40 Gy, a shift in the differentiated PEES peak toward higher photon energies at ≥40 Gy, and the largest integrated photoemission intensity across doses, consistent with an elevated relative photoemission response under identical acquisition and processing conditions. XPS trends for Liepaja were consistent with irradiation-driven modification of the Si–O environment, while other sites showed comparatively minor changes. Filtration results mirrored these observations: Liepaja sand demonstrated the clearest dose-dependent enhancement in chromium removal with a non-monotonic feature at 40 Gy, consistent with competing formation and transformation of oxygen-related surface-reactive centers. Overall, the results show that electron-beam irradiation can modestly enhance Cr(VI) removal by natural quartz sands, with the magnitude governed by site-specific near-surface electronic structure and its dose-dependent evolution. Full article

Purpose: Gibberellins (GAs) are key phytohormones that regulate plant growth, development, and responses to environmental stress, and their metabolism is mediated by 2-oxoglutarate-dependent dioxygenases (2OGDs). Cotton (Gossypium spp.) is a polyploid crop with a complex genome; however, the evolutionary characteristics and stress-responsive regulation of GA-related 2OGDs remain poorly understood. This study aimed to systematically investigate the evolution, expression patterns, and stress-associated regulation of the cotton 2OGD multigene family, with particular emphasis on GA-related members. Methods: 2OGD genes were identified genome-wide in four Gossypium species and Arabidopsis thaliana. Phylogenetic relationships, gene structures, conserved motifs, cis-acting regulatory elements, and synteny were analyzed. Transcriptomic data from multiple tissues and developmental stages, together with time-course RNA-seq under salt stress, were examined. Transcriptome–metabolome association analysis, endogenous GA quantification, and predicted protein–protein interaction analysis were conducted. Results: A total of 583 2OGD genes were identified and classified into three major classes, including a Class C group comprising GA2ox, GA3ox, and GA20ox genes. Polyploidization-associated duplication contributed to the expansion of the 2OGD family, and most duplicated gene pairs exhibited signatures of purifying selection. GA-related 2OGDs displayed conserved motif compositions with variation in cis-acting elements. Promoter analysis identified abundant hormone-responsive, stress-responsive, and growth-related cis-elements, suggesting complex regulatory control of GA-related 2OGDs in cotton. Under salt stress, GhGA2OX1 and GhGA20OX2 were upregulated, whereas GhGA3OX1 was downregulated, accompanied by reduced endogenous GA levels. Conclusions: GA-related 2OGDs in cotton are transcriptionally responsive to salt stress and are associated with changes in GA metabolism, providing a basis for future functional studies. Full article

Sexual systems critically influence woody plant evolution and forest functioning, yet their global patterns and environmental drivers remain understudied. Investigating the environmental correlates of sexual systems in woody plants is essential for developing targeted conservation and restoration strategies for forest ecosystems. We analyzed sexual system composition of 3595 woody species from 30 ForestGEO forest plots spanning tropical, subtropical, and temperate zones in the Northern Hemisphere. Species were classified by sexual system (hermaphroditism, monoecy, and dioecy) and growth form (trees and shrubs). Community-level patterns were assessed across climatic zones, and the relative contributions of climatic, spatial, and topographic factors were quantified using multivariate and network-based analyses. We observed the following: (1) Sexual system composition exhibited clear climatic differentiation: dioecious species predominate in tropical forests, while monoecious species increased in dominance toward temperate regions. (2) Climatic variables, particularly temperature and precipitation, accounted for more variation in sexual system composition than spatial or topographic factors, although their relative influence differed among climatic zones. (3) Distinct life-form-specific patterns were detected: sexual systems of trees were more strongly associated with broad-scale climatic gradients, whereas those of shrubs were more closely linked to spatial structure and local environmental heterogeneity. Together, these results demonstrate that climate is a dominant but life-form-dependent driver of sexual system biogeography in woody plants, improving trait-based understanding of forest biodiversity responses to climate change. Full article

The built environment (BE) plays a central role in shaping everyday mobility patterns and determining how physical activity (PA) is integrated into daily life. Foundational BE frameworks such as the 5Ds (density, diversity, design, distance to transit, and destination accessibility) have shaped policy and planning worldwide. However, these frameworks remain predominantly spatial and overlook temporal dynamics. This review addresses this omission by introducing Duration as the sixth dimension (6th D) of the BE framework, reframing accessibility in terms of the lived temporal experience of movement rather than static spatial distance. Travel conditions vary across the day. Routes that are safe and efficient at one time often become congested, stressful, and prohibitive at another. Such variability undermines PA and active transport (AT) and diminishes the health benefits of supportive BE. Methodologically, the review synthesises evidence from 1991 to 2025 across public health, transport planning, BE, and environmental psychology. Pertinent literature (102 shortlisted articles) published in English was retrieved from Scopus, Web of Science (WoS), and PubMed, which collectively provide comprehensive coverage of multidisciplinary research spanning transport planning, public health, and behavioural sciences. The PRISMA 2020 approach and VOSviewer (version 1.6.20), were used, together with a structured, Excel-based integrative synthesis, to analyse publication trends, conceptual evolution, and integrative patterns in the retrieved literature. The synthesis shows that accessibility, mobility stress, and travel behaviour are strongly time-dependent. This time dependence is systematic rather than incidental across contexts. Globally, commute durations beyond 45 min are associated with lower life satisfaction and poorer health outcomes. Embedding Duration within BE frameworks establishes a time-responsive and equity-sensitive paradigm for healthier and more resilient urban systems. Full article

Global warming is increasingly constraining plant productivity by altering the photosynthetic energy balance and leaf thermoregulation. Under high light and elevated temperatures, absorption of energy in excess (AEE) by photosystem II disrupts photosynthetic electron transport, oxygen evolution, and CO₂ assimilation, often accompanied by reduced foliar transpiration. These conditions promote photoinhibition, as reflected by a decrease in maximal photosynthetic efficiency (Fv/Fm), an increase in non-photochemical quenching (NPQ), and photooxidative stress associated with enhanced reactive oxygen species (ROS) production. In addition to environmental heat stress, AEE influences foliar temperature through internal energy partitioning, including regulated dissipation of AEE as heat and changes in transpirational cooling. The relative contributions of NPQ, photochemistry, and transpiration to leaf temperature regulation are strongly context dependent and vary with light intensity, temperature changes, and water availability. Under global warming, rising background temperatures and increased vapor pressure deficit may constrain transpirational cooling and alter the balance between non-photochemical and photochemical energy dissipation and usage, respectively. In this review, we synthesize current knowledge on AEE handling, photoinhibition, NPQ and other quenching processes, and on transpiration cooling, and discuss a conceptual framework in which sustained imbalance among these processes under global warming conditions could amplify foliar heat stress and increase the risk of cellular damage. Rather than proposing new physiological mechanisms, this work integrates existing evidence across molecular, leaf, and ecosystem scales to highlight potential feedbacks relevant to plant performance under future climate prediction scenarios. Full article

The extensive use of synthetic nitrogen fertilizers has sustained global food production for more than a century but at high environmental and energetic costs. Improving nitrogen use efficiency (NUE) has therefore become a key objective to maintain productivity while reducing the ecological footprint of agriculture. This review synthesizes current knowledge on the biological foundations of NUE enhancement, focusing on the role of microbial biofertilizers and biostimulants. The main mechanisms through which plant-associated microorganisms contribute to nitrogen acquisition and assimilation are analyzed. In parallel, advances in genomics, biotechnology, and formulation science are highlighted as major drivers for the development of next-generation microbial consortia and bio-based products. Particular attention is given to the current landscape of commercial biofertilizers and biostimulants, summarizing the principal nitrogen-fixing and plant growth-promoting products available on the market and their agronomic performance. Moreover, major implementation challenges are discussed, including formulation stability and variability in field results. Overall, this review provides an integrated perspective on how biological innovations, market evolution, and agronomic optimization can jointly contribute to more sustainable nitrogen management and reduce dependence on synthetic fertilizers in modern agriculture. Full article

Venomous snakes constitute ecologically significant and medically relevant organisms due to the risks associated with their bites, which frequently result in secondary infections. The oral microbiota of these reptiles plays a crucial role in the pathogenesis of such infections; however, its diversity and clinical implications remain insufficiently characterized. This is the first comprehensive review to systematically trace the methodological evolution in snake oral microbiota research, documenting the paradigm shift from traditional culture-dependent techniques to advanced culture-independent approaches, including next-generation sequencing and metagenomics. Our analysis uniquely demonstrates the transformative impact of these technological advances on bacterial diversity identification and antimicrobial resistance gene detection in venomous species. Environmental factors, captivity conditions, and venom composition significantly influence microbial community structure and resistance profiles. These intricate interactions are essential for improving clinical management of snakebite infections, informing empirical antibiotic therapy protocols, and guiding antivenom production strategies. Additionally, the potential of snake oral microbiota as a source of novel bioactive compounds represents an emerging area of bioprospecting research. This review uniquely bridges microbiology, venomics, and clinical medicine, demonstrating the necessity for integrative, multidisciplinary approaches to fully elucidate the ecological and biomedical significance of oral microbial communities in venomous snakes. Full article

Background and Objectives: The imminent threat of antibiotic resistance has spurred studies of nonconventional antimicrobial approaches. Gallium utilization is a promising and emerging approach to treating a variety of resistant bacteria using “Trojan horse” strategies to disrupt iron-dependent processes and biofilms. This study utilized experimental evolution to test the evolvability of gallium resistance in Staphylococcus aureus and resistance traits potentially correlated with metals, antibiotics and polyfluorinated compounds, as well as its genomics foundations. Methods: Whole-genome sequencing was utilized to reveal functional networks of mutations associated with gallium resistance. Additionally, scanning electron microscopy (SEM) observation was utilized to visualize distinct morphological changes on the surface of gallium-resistant populations and compare with the control populations. Results: As demonstrated by these studies, S. aureus evolved resistance to gallium after 20 days of selection. Furthermore, these populations displayed resistance traits correlated with heavy metals and polyfluorinated compounds. In contrast, the gallium-resistant populations were very sensitive to antibiotics. Whole-genome analysis revealed significant polymorphisms in the gallium (III)-resistant populations for example, polymorphisms in staphyloferrinA export MFS transporter/D ornithine citrate ligase (sfaA/sfaD), teichoic acid D Ala esterase (fmtA), DUF3169 family protein (KQ76_RS01520) and adenine phosphoribosyltransferase (KQ76_RS08360), while polymorphisms in the ABC transporter permease subunit (pstC) and acyltransferase family protein (KQ76_RS04365) were unique to the control populations. The polymorphisms directly affected the cells’ morphology. SEM images showed significant external ultrastructural changes in the gallium-selected bacterial cells compared to the control cells. Conclusions: Our study confirmed that using gallium as an antimicrobial can have significant health and environmental implications. Full article

Acetic acid, a common weak acid in industrial fermentation processes, occurs naturally in lignocellulosic hydrolysates and is a byproduct of microbial metabolism. As a significant environmental stressor, it triggers the expression of multiple genes involved in various cellular responses, including biological processes, cellular components, and molecular functions. Using the acid-tolerant strain Pichia kudriavzevii PkAC-9, developed through adaptive laboratory evolution under acetic acid stress, we conducted a transcriptional analysis of 70 stress response-associated genes. RT-qPCR analysis revealed significant upregulation of several genes compared with the wild-type strain under acetic acid stress conditions. The most dramatic changes occurred in genes encoding key metabolic enzymes and stress response proteins associated with the TCA cycle (Fum: 18.6-fold, Aco: 17.1-fold, Oxo: 9.0-fold), carbon and energy metabolism (Tdh2: 28.0-fold, Erg2: 2.0-fold), electron transport chain (Gst: 10.6-fold), molecular chaperones (Hsp104: 26.9-fold, Hsp70: 13.0-fold, Sgt2: 10.0-fold), and transcriptional activators. Our findings indicate that the enhanced acetic acid tolerance of P. kudriavzevii PkAC-9 primarily depends on the coordinated upregulation of genes involved in energy metabolism, cellular detoxification mechanisms, and protein quality control systems through heat shock and transcriptional activator proteins. Full article

Reproductive biology patterns are crucial for understanding the dynamics and evolution of plants. This is particularly relevant in bryophytes, where sex expression and reproductive success can vary significantly with environmental conditions. Islands, with their isolated and diverse environments, provide natural laboratories to explore these dynamics. In this study, we investigate sex expression, the phenotypic sex ratio, and sporophyte production in one moss (Exsertotheca intermedia) and three liverwort species (Frullania polysticta, Frullania teneriffae, Porella canariensis) across their entire distribution range. Depending on the species, the geographic range includes the Canary Islands, Madeira, the Azores, the Iberian Peninsula, the British Isles, and the Faroe Islands. For the non-Macaronesian endemic species (F. teneriffae, P. canariensis) higher levels of sex expression and males were found in the Macaronesian archipelagos. In leafy liverworts, females appear to be correlated with lower temperatures and higher precipitation levels, while males seem to be associated with higher temperatures and relatively lower precipitation levels. In this study, we demonstrated that bryophyte populations from Macaronesia exhibited higher levels of sex expression compared to their continental counterparts, suggesting that the distinct environmental conditions of these islands play a crucial role in shaping their reproductive patterns. Full article

Studying natural hazards in the context of human-induced landscape transformation is complex, especially in regions with limited information. The narratives of the elderly can play a role in filling these knowledge gaps at the multi-decadal timescale. Here, we build upon a citizen-based elderly approach to understanding natural hazard patterns and landscape transformation in a tropical mountainous environment, the Kigezi Highlands (SW Uganda). We engaged 98 elderly citizens (>70 years old) living in eight small watersheds with different characteristics. Through interviews and focus group discussions, we reconstructed historical timelines and used participatory mapping to facilitate the interview process. We cross-checked the information of the elderly citizens with historical aerial photographs, archives, and field visits. Our results show that major land use/cover changes are associated with a high population increase over the last 80 years. We also evidence an increase in reported natural hazard events such as landslides and flash floods from the 1940s until the 1980s. Then, we notice a stabilization in the number of hazard events per decade, although the two most impacted decades (1980s and 2000s) stand out. Despite this new information, an increase in natural hazard frequency due to land use/cover change cannot yet be quantitatively validated, especially when the probable modulator effect of climate variability is considered. Nevertheless, the increase in the exposure of a vulnerable population to natural hazards is clear, and population growth together with poor landscape management practices are the key culprits that explain this evolution. This study demonstrates the added value of historical narratives in terms of understanding natural hazards in the context of environmental changes. This insight is essential for governments and non-governmental organizations for the development of policies and measures for disaster risk reduction that are grounded in the path dependence of local realities. Full article

The thermodynamic study of protein folding shows the generation of a narrow range of ΔG° values, as a net result of large changes in the ΔH° and TΔS° values of the folding process. The obvious consequence of this narrow range of values is that a linear enthalpy–entropy relationship, showing apparent enthalpy–entropy compensation (EEC), is clearly observed to be associated with the study of protein folding. Herein, we show the ΔH°, TΔS°, and ΔG° values for a set of 583 data from protein folding processes, at various temperatures, as calculated by using the Gibbs–Helmholtz equations. This set of thermodynamic data was calculated from the melting temperature (Tm), the melting enthalpy (ΔHm), and the change in heat capacity (ΔCp°) values, all of them associated with the heat-induced protein unfolding processes and included in the ProTherm Data Base. The average values of enthalpy (ΔH°av), entropy (TΔS°av), and free energy (ΔG°av) for the folding process were calculated within the range of temperature from 0 °C to the average value of Tm. The values and temperature dependency of TΔS°av within this temperature range are practically equal to those corresponding to ΔH°av, while ΔG°av remains small and displaying a curve with a minimum at about 10 °C and a value of ΔG° = −30.9 kJ/mol at the particular temperature of 25 °C. The large negative value of TΔS°av, together with the also large and negative value of ΔCp°av, suggests large conformational changes and important EEC, thus causing the small average value of ΔG° for protein folding, which is enough to guarantee both protein stability and molecular flexibility to allow for adaptation to the chemical potentials of the environment. Our analysis suggests that EEC may be the quantum-mechanical evolutive mechanism to make functional proteins adaptative to environmental temperature and metabolite concentrations. The analysis of protein folding data, compared with those of protein–ligand interaction, allows us to suggest strategies to overcome EEC in the design of new drugs. Full article

Cascading landslides are specific multi-hazard events in which a primary movement triggers successive landslide processes. Areas with dynamic and quickly changing environments are more prone to this type of phenomena. Both the kind and the evolution velocity of a landslide depends on the materials involved. Indeed, rockfalls are generated when rocks fall from a very steep slope, while debris flow and/or mudslides are generated by fine materials like silt and clay after strong water imbibition. These events can amplify the damage caused by the initial trigger and propagate instability along a slope, often resulting in significant environmental and societal impacts. The Morino-Rendinara cascading landslide, situated in the Ernici Mountains along the border of the Abruzzo and Lazio regions (Italy), serves as a notable example of the complexities and devastating consequences associated with such events. In March 2021, a substantial debris flow event obstructed the Liri River, marking the latest step in a series of landslide events. Conventional techniques such as geomorphological observations and geological surveys may not provide exhaustive information to explain the landslide phenomena in progress. For this reason, UAV image acquisition, InSAR interferometry, and pixel offset analysis can be used to improve the knowledge of the mechanism and kinematics of landslide events. In this work, the interferometric data ranged from 3 January 2020 to 24 March 2023, while the pixel offset data covered the period from 2016 to 2022. The choice of such an extensive data window provided comprehensive insight into the investigated events, including the possibility of identifying other unrecorded events and aiding in the development of more effective mitigation strategies. Furthermore, to supplement the analysis, a specific finite element method for slope stability analysis was used to reconstruct the deep geometry of the system, emphasizing the effect of groundwater-level flow on slope stability. All of the findings indicate that major landslide activities were concentrated during the heavy rainfall season, with movements ranging from several centimeters per year. These results were consistent with numerical analyses, which showed that the potential slip surface became significantly more unstable when the water table was elevated. Full article

The herbicide 2,4-dichlorophenoxyacetic acid (2,4-D) has been widely used around the world in both agricultural and non-agricultural fields due to its high activity. However, the heavy use of 2,4-D has resulted in serious environmental contamination, posing a significant risk to non-target organisms, including human beings. This has raised substantial concerns regarding its impact. In addition to agricultural use, accidental spills of 2,4-D can pose serious threats to human health and the ecosystem, emphasizing the importance of prompt pollution remediation. A variety of technologies have been developed to remove 2,4-D residues from the environment, such as incineration, adsorption, ozonation, photodegradation, the photo-Fenton process, and microbial degradation. Compared with traditional physical and chemical remediation methods, microorganisms are the most effective way to remediate 2,4-D pollution because of their rich species, wide distribution, and diverse metabolic pathways. Numerous studies demonstrate that the degradation of 2,4-D in the environment is primarily driven by enzymatic processes carried out by soil microorganisms. To date, a number of bacterial and fungal strains associated with 2,4-D biodegradation have been isolated, such as Sphingomonas, Pseudomonas, Cupriavidus, Achromobacter, Ochrobactrum, Mortierella, and Umbelopsis. Moreover, several key enzymes and genes responsible for 2,4-D biodegradation are also being identified. However, further in-depth research based on multi-omics is needed to elaborate their role in the evolution of novel catabolic pathways and the microbial degradation of 2,4-D. Here, this review provides a comprehensive analysis of recent progress on elucidating the degradation mechanisms of the herbicide 2,4-D, including the microbial strains responsible for its degradation, the enzymes participating in its degradation, and the associated genetic components. Furthermore, it explores the complex biochemical pathways and molecular mechanisms involved in the biodegradation of 2,4-D. In addition, molecular docking techniques are employed to identify crucial amino acids within an alpha-ketoglutarate-dependent 2,4-D dioxygenase that interacts with 2,4-D, thereby offering valuable insights that can inform the development of effective strategies for the biological remediation of this herbicide. Full article

The evolution from conventional to modern agricultural practices, characterized by Agriculture 4.0 principles such as the application of innovative materials, smart water, and nutrition management, addresses the present-day challenges of food supply. In this context, polymer hydrogels have become a promising material for enhancing agricultural productivity due to their ability to retain and then release water, which can help alleviate the need for frequent irrigation in dryland environments. Furthermore, the controlled release of fertilizers by the hydrogels decreases chemical overdosing risks and the environmental impact associated with the use of agrochemicals. The potential of polymer hydrogels in sustainable agriculture and farming and their impact on soil quality is revealed by their ability to deliver nutritional and protective active ingredients. Thus, the impact of hydrogels on plant growth, development, and yield was discussed. The question of which hydrogels are more suitable for agriculture—natural or synthetic—is debatable, as both have their merits and drawbacks. An analysis of polymer hydrogel life cycles in terms of their initial material has shown the advantage of bio-based hydrogels, such as cellulose, lignin, starch, alginate, chitosan, and their derivatives and hybrids, aligning with sustainable practices and reducing dependence on non-renewable resources. Full article