Search Results (126)

South Dongting Lake is an essential aquatic ecosystem that receives substantial water inflows from the Xiangjiang and Zishui Rivers. However, it is significantly impacted by human activities, including mining, smelting, and farming. These activities have led to serious contamination of the lake’s sediments with heavy metals (HMs). This study investigated the distribution, mobility, and influencing factors of HMs at the sediment–water interface. To this end, sediment samples were analyzed from three key regions (Xiangjiang River estuary, Zishui River estuary, and northeastern South Dongting Lake) using traditional sampling methods and Diffusive Gradients in Thin Films (DGT) technology. Analysis of fifteen HMs (Pb, Bi, Ni, As, Se, Cd, Sb, Mn, Zn, V, Cr, Cu, Tl, Co, and Fe) revealed significant spatial heterogeneity. The results showed that Cr, Cu, Pb, Bi, Ni, As, Se, Cd, Sb, Mn, Zn, and Fe exhibited high variability (CV > 0.20), whereas V, Tl, and Co demonstrated stable concentrations (CV < 0.20). Concentrations were found to exceed background values of the upper continental crust of eastern China (UCC), Yangtze River sediments (YZ), and Dongting Lake sediments (DT), particularly at the Xiangjiang estuary (XE) and in the northeastern regions. Speciation analysis revealed that V, Cr, Cu, Ni, and As were predominantly found in the residual fraction (F4), while Pb and Co were concentrated in the oxidizable fraction (F3), Mn and Zn appeared primarily in the exchangeable fractions (F1 and F2), and Cd was notably dominant in the exchangeable fraction (F1), suggesting a high potential for mobility. Additionally, DGT results confirmed a significant potential for the release of Pb, Zn, and Cd. Contamination assessment using the Pollution Load Index (PLI) and Geoaccumulation Index (Igeo) identified Pb, Bi, Ni, As, Se, Cd, and Sb as major pollutants. Among these, Bi and Cd were found to pose the highest risks. Furthermore, the Risk Assessment Code (RAC) and the Potential Ecological Risk Index (PERI) highlighted Cd as the primary ecological risk contributor, especially in the XE. The study identified sediment grain size, pH, electrical conductivity, and nutrient levels as the primary influencing factors. The PMF modeling revealed HM sources as mixed smelting/natural inputs, agricultural activities, natural weathering, and mining/smelting operations, suggesting that remediation should prioritize Cd control in the XE with emphasis on external inputs. Full article

Leishmaniasis, a vector-borne neglected tropical disease, affects over 6.2 million people globally. Case acquisition is increasingly recognized in the United States, and in Texas, most reported cases are locally acquired and speciated to Leishmania mexicana. We conducted a scoping literature review to systematically assess contemporary research on Leishmania in humans, animals, reservoir hosts, or vectors in Texas after 2000. Out of 22 eligible studies, the most prevalent themes were case reports, followed by studies on domestic animals, reservoirs, and vectors, with several studies bridging multiple disciplines. Climate change, urbanization, and habitat encroachment appear to be driving the northward expansion of L. mexicana, which is primarily attributed to shifts in the habitats of key vectors (Lutzomyia anthophora) and reservoirs (Neotoma spp.). Leishmania appears to be expanding into new areas, with potential for further spread. As ecological conditions evolve, strengthening surveillance and clinician awareness is crucial to understanding disease risk and improving early detection and treatment in affected communities. Full article

Elucidating the coexistence mechanisms of rapidly diverging species has long been a challenge in evolutionary biology. Genome-wide polymorphic loci are expected to provide insights into the speciation processes of these closely related species. This study focused on seven Chinese sclerophyllous oaks, represented by Quercus spinosa, Quercus aquifolioides, Quercus rehderiana, Quercus guyavifolia, Quercus monimotricha, Quercus semecarpifolia, and Quercus senescens, employing 27,592 single-nucleotide polymorphisms to examine their phylogenetic relationships at the genomic level. Combined with genetic structure analysis, phylogenetic trees revealed that the genetic clustering of individuals was influenced by both geographic distance and ancestral genetic components. Furthermore, this study confirmed the existence of reticulate evolutionary relationships among the species. Frequent gene flow and introgression within the seven species were primarily responsible for the ambiguous interspecies boundaries, with hybridization serving as a major driver of reticulate evolution. Additionally, the seven species exhibited distinct differences in niche occupancy. By reconstructing the climatic adaptability of ancestral taxonomic units, we found that the climatic tolerance of each species displayed differential responses to 19 climatic factors. Consequently, ecological niche differentiation and variations in habitat adaptation contributed to the preservation of species boundaries. This study provides a comprehensive understanding of the speciation processes in rapidly diverging genera and underscores the significance of both genetic and ecological factors in the formation and maintenance of species boundaries. Full article

In the traditional classification system of the Lauraceae family based on morphology and anatomy, the phylogenetic position of the genus Sassafras has long been controversial. Chloroplast (cp) evolution of Sassafras has not yet been illuminated. In this study, we first sequenced and assembled the complete cp genomes of Sassafras, and conducted the comparative cp genomics, phylogenomics, and divergence time estimation of this ecological and economic important genus. The whole length of cp genomes of the 10 Sassafras ranged from 151,970 bp to 154,011 bp with typical quadripartite structure, conserved gene arrangements and contents. Variations in length of cp were observed in the inverted repeat regions (IRs) and a relatively high usage frequency of codons ending with T/A was detected. Four hypervariable intergenic regions (ccsA-ndhD, trnH-psbA, rps15-ycf1, and petA-psbJ) and 672 cp microsatellites were identified for Sassafras. Phylogenetic analysis based on 106 cp genomes from 30 genera within the Lauraceae family demonstrated that Sassafras constituted a monophyletic clade and grouped a sister branch with the Cinnamomum sect. Camphora within the tribe Cinnamomeae. Divergence time between S. albidum and its East Asian siblings was estimated at the Middle Miocene (16.98 Mya), S. tzumu diverged from S. randaiense at the Pleistocene epoch (3.63 Mya). Combined with fossil evidence, our results further revealed the crucial role of the Bering Land Bridge and glacial refugia in the speciation and differentiation of Sassafras. Overall, our study clarified the evolution pattern of Sassafras cp genomes and elucidated the phylogenetic position and divergence time framework of Sassafras. Full article

The genus Salvia L. (Lamiaceae) is characterized by complex taxonomy and controversial phylogeny. This genus includes about a thousand species with worldwide distribution and high ecological, structural, functional and morphological diversity. Because of their high content of essential oils, various Salvia plants are widely used in medicine, as well as in the food, perfume, cosmetic, and paint industries; they also are valuable melliferous resources. The present study reviews the taxonomic history of the genus Salvia and the phylogenetic relationships between the taxa within the subgenera Salvia, Sclarea, and Glutinaria. Among the Salvia species, three basic chromosome numbers, x = 7, x = 8, and x = 11, were most common, although other basic chromosome numbers (x = 6–19) were determined, which was probably due to events of dysploidy, aneupoidy, and/or polyploidy occurring during speciation. Recent molecular cytogenetic studies based on Next Generation Sequencing technologies have clarified the chromosomal organization of several Salvia species. The patterns of chromosome distribution of 45S rDNA, 5S rDNA, and satellite DNAs made it possible to assess their intra- and interspecific chromosome diversity. However, further cytogenetic studies are needed to characterize the chromosomes in the genomes of other Salvia species and specify the genomic relationships among them. Full article

This study investigates the weathering crust composite of serpentine, pyroxenite and granite in the Niangniangmiao area, the weathering crusts inside and outside the mining area were compared respectively, systematically revealing the distribution patterns, migration pathways, and ecological element activity characteristics of high-background elements (e.g., chromium (Cr) and nickel (Ni)) through precise sampling, the Tessier five-step sequential extraction method, and a migration coefficient model. Key findings include: (1) Element distribution and controlling mechanisms: The average Cr and Ni contents in the serpentinite profile are significantly higher than those in pyroxenite. However, the semi-weathered pyroxenite layer exhibits an inverted Cr enrichment ratio in relation to serpentinite, 1.8× and 1.2×, respectively, indicating that mineral metasomatic sequences driven by hydrothermal alteration dominate element differentiation; the phenomenon of inverted enrichment of high-background elements occurs in the weathering crust profiles of the two basic rocks. (2) Dual impacts of mining activities on heavy metal enrichment: Direct mining increases topsoil Cr content in serpentinite by 40% by disrupting parent material homology, while indirect activities introduce exogenous Zn and Cd (Spearman correlation coefficients with Cr/Ni are from ρ = 0.58 to ρ = 0.72). Consequently, the bioavailable fraction ratio value of Ni outside the mining area (21.14%) is significantly higher than that within the area (14.30%). (3) Element speciation and ecological element activity: Over 98% of Cr in serpentine exists in residual fractions, whereas the Fe-Mn oxide-bound fraction (F3) of Cr in extra-mining pyroxenite increases to 5.15%. The element activity in ecological systems ranking of Ni in soil active fractions (F1 + F2 = 15%) follows the order: granite > pyroxenite > serpentine. Based on these insights, a scientific foundation for targeted remediation in high-background areas (e.g., prioritizing the treatment of semi-weathered pyroxenite layers) can be provided. Full article

Adaptive radiations are characterized by increases in rates of lineage and trait evolution, typically due to the opening of new ecological opportunities such as may follow from dispersal to a new region or the evolution of a trait that allows exploitation of new niches. This results in clades that have accumulated unusually high biological diversity within a relatively short evolutionary timespan and hence the phenomenon has attracted longstanding interest amongst evolutionary biologists. Natricidae is a family of snakes with a primarily Old World distribution but which have colonized the New World on a single occasion. This dispersal event coincides with an increased speciation rate that has led to a species-rich New World clade. Herein, we take a phylogenetic comparative approach to investigate a likely adaptive radiation of New World natricids. We first confirmed previously reported findings of a single origin (providing new ecological opportunity) coinciding with a burst of lineage diversification. We then estimate the rates of evolution for three ecologically important traits (body size and broad categories of diet and habitat) separately for New World and Old World natricids. Of these three traits, our results provide evidence that only transition rates between terrestrial and (semi-)aquatic habitats are higher in the New World clade. Taken together, this supports a scenario of an adaptive radiation in natricids primarily associated with differentiation by habitat as the clade spread across the New World following its arrival there. Considering other adaptive radiations alongside our evidence for Natricidae, we propose the hypothesis that there is a common distinction between spatially constrained ‘island’ adaptive radiations (which often diverge along trophic axes) and continental adaptive radiations, which diverge as the clade spreads across a larger spatial scale and adapts to different habitats. Full article

Yuexi County, a key tea-producing area in eastern Dabie Mountain, may face potential heavy metal(oid) (HM) contamination risks due to nearby mining and intensive agricultural activities. This study investigated seven HMs (As, Cd, Cr, Hg, Ni, Pb, and Zn) in paired soil–tea samples using multiple analytical approaches, including the geoaccumulation index (I_geo), the potential ecological risk index (RI), bioconcentration factor (BCF), and positive matrix factorization (PMF) with Monte Carlo simulation for health risk assessment. Results showed that Zn (82.65 mg/kg) and Cd (0.15 mg/kg) were the most enriched HMs in soils with higher I_geo values than other HMs. PMF analysis identified four major HM sources: mining and transportation (27.75%), agricultural activities (26.90%), natural soil parent material (26.17%), and industrial emissions (19.18%). Tea plants exhibited selective HM absorption, with Hg showing the highest bioaccumulation (BCF = 0.45), while As, Cr, and Pb had minimal uptake (BCF < 0.05). Although health risk assessments confirmed that both non-carcinogenic and carcinogenic risks from soil and tea consumption were within safe limits for adults and children, Cr and Ni required special attention due to their risk contributions. Overall, ecological and health risks in the region were found to be low. These findings provide important scientific support for pollution monitoring, risk management, and overcoming trade barriers in tea-growing regions with acidic soils. Future research should integrate HM speciation analysis with seasonal monitoring to further optimize tea plantation management strategies. Full article

The widespread implementation of anaerobic digestion (AD) systems for organic waste treatment is increasingly challenged by emerging contaminants, including microplastics (MPs), antibiotics, and heavy metals (HMs), which exhibit environmental persistence and pose risks to ecological and human health. This review critically examines the sources, transformation pathways, and advanced mitigation strategies for these contaminants within AD systems. MPs, primarily derived from fragmented plastics and personal care products, accumulate in digestates and act as vectors for adsorbing toxic additives and pathogens. Antibiotics, introduced via livestock manure and wastewater, exert selective pressures that propagate antibiotic resistance genes (ARGs) while disrupting methanogenic consortia. HMs, originating from industrial and agricultural activities, impair microbial activity through bioaccumulation and enzymatic interference, with their bioavailability modulated by speciation shifts during digestion. To combat these challenges, promising mitigation approaches include the following: (1) bioaugmentation with specialized microbial consortia to enhance contaminant degradation and stabilize HMs; (2) thermal hydrolysis pretreatment to break down MPs and antibiotic residues; (3) chemical passivation using biochar or sulfides to immobilize HMs. Co-digestion practices inadvertently concentrate these contaminants, with MPs and HMs predominantly partitioning into solid phases, while antibiotics persist in both liquid and solid fractions. These findings highlight the urgency of optimizing mitigation strategies to minimize contaminant mobility and toxicity. However, critical knowledge gaps persist regarding the long-term impacts of biodegradable MPs, antibiotic transformation byproducts, and standardized regulatory thresholds for contaminant residues in digestate. This synthesis underscores the necessity for integrated engineering solutions and policy frameworks to ensure the safe resource recovery from AD systems, balancing energy production with environmental sustainability. Full article

Heavy metals in peatland pose significant ecological risks due to their persistence, bioaccumulation, and dynamic mobilization under fluctuating environmental conditions. Understanding heavy metal dynamics in subtropical peatlands is critical for addressing global gaps in wetland metal cycling, as these ecosystems face intensified organic decomposition and climatic fluctuations that amplify mobilization risks—contrasting starkly with stable northern counterparts. This study investigates the geochemistry of heavy metals (Cr, Cu, Cd, and Pb) of Dajiuhu peatland in central China, using sequential extraction, gradient diffusion (DGT), and random forest modeling. The mean concentrations of Cr, Cu, Cd, and Pb in peat samples were 24.6 ± 13.7 mg/kg, 14.9 ± 2.51 mg/kg, 1.15 ± 0.62 mg/kg, and 54.9 ± 16.16 mg/kg. Principal component analysis identified three sources: plant-derived litter, bedrock weathering, and atmospheric deposition. Metal speciation revealed the predominance of residual fractions (Cr: 64%, Cu: 61%, Pb: 65%, Cd: 35%), with Cd exhibiting higher mobility (exchangeable: 20%, reducible: 25%). DGT measurements further confirmed distinct migration behaviors, as Cd stored in peat actively diffuses into the surrounding environment, while Pb present in the environment becomes immobilized within the peat matrix. Environmental factors regulate heavy metal speciation through distinct mechanisms. The exchangeable fractions of Cu and Cr are primarily controlled by the C/N ratio, whereas their oxidizable forms are significantly associated with Al content and pH levels. The exchangeable fractions of Pb and Cd are largely influenced by oxidation-reduction potential (ORP) and Ca concentrations, and their reduced forms are closely linked to total sulfur (TS) content. Furthermore, the reducible fractions of Cr and Cd are not only regulated by ORP but also modulated by TS. Our study highlights that the mobility of heavy metals in subtropical peatlands is likely to increase substantially as a result of environmental changes. Full article

The Japanese archipelago as a continental island of the Eurasia continent and harboring high levels of plant species diversity provides an ideal geographical setting for investigating vicariant allopatric speciation due to the sea-level fluctuations associated with climatic oscillations during the Quaternary. In this study, three chloroplast DNA regions and 14 nuclear loci were sequenced for 31 individuals from three populations of Torreya nucifera var. nucifera and 52 individuals from three populations of T. nucifera var. radicans. Population genetic analyses (Network, STRUCTURE and phylogeny) revealed that the genetic boundaries of the two varieties are distinct, with high genetic differentiation (F_ST) of 0.9619 in chloroplast DNA and 0.6543 in nuclear loci. The relatively ancient divergence times between the two varieties were estimated to 3.03 Ma by DIYABC and 1.77 Ma by IMa2 when dated back to the late Pliocene and the early Pleistocene, respectively. The extremely weak gene flow (2Nm = 0.1) between the two varieties was detected by IMa2, which might be caused by their population expansion since the early Pleistocene (~2.0 Ma) inferred in the Bayesian skyline plots and DIYABC. Niche modeling showed that the two varieties had significant ecological differentiation (p < 0.001) since the Last Interglacial even earlier. These results demonstrate that vicariant allopatric speciation due to sea-level fluctuations may be a common mode of speciation in the Japanese archipelago. This finding provides insights into the understanding of species diversification in the Japanese Archipelago and even East Asian flora under climatic oscillations during the Quaternary. Full article

Soil heavy metal contamination poses critical challenges to ecological sustainability in mining regions, particularly in acidic soils from copper sulfide mines. This study developed a sustainable remediation strategy using a carbonyl iron powder–biochar composite (CIP@BC) derived from agricultural waste (rice husk) and industrial byproducts. The composite was synthesized through an energy-efficient mechanical grinding method at a 10:1 mass ratio of biochar to carbonyl iron powder, aligning with circular economy principles. Material characterization revealed CIP particles uniformly embedded within biochar’s porous structure, synergistically enhancing surface functionality and redox activity. CIP@BC demonstrated exceptional Cu²⁺ immobilization capacity (910.5 mg·g⁻¹), achieved through chemisorption and monolayer adsorption mechanisms. Notably, the remediation process concurrently improved key soil health parameters. Soil incubation trials demonstrated that 6% CIP@BC application elevated soil pH from 4.27 to 6.19, reduced total Cu content by 29.43%, and decreased DTPA-extractable Cu by 67.26%. This treatment effectively transformed Cu speciation from bioavailable to residual fractions. Concurrent improvements in electrical conductivity (EC), cation exchange capacity (CEC), soil organic matter (OM), and soil water content (SWC) collectively highlighted the composite’s multifunctional remediation potential. This study bridges environmental remediation with sustainable land management through an innovative waste-to-resource approach that remediates acidic mine soils. The dual functionality of CIP@BC in contaminant immobilization and soil quality restoration provides a scalable solution. Full article

Oaks in the genus Quercus L. are keystone species in the forest ecosystem and are considered ideal models for the study of plant evolution. In this research, we applied population genetics, ecological niche analysis and phenotypic traits to explore patterns of species differentiation and demographic history of two Chinese montane oak species (Quercus baronii Skan and Quercus dolicholepis A. Camus) from Quercus section Ilex across species distribution ranges. Analyses of population genetics with ten nuclear microsatellite loci on 33 populations of the two oak species indicated great interspecific genetic variations with distinct genetic backgrounds for the two oaks. Simulations on species demography suggested a speciation-without-migration model as the best to explain species divergence, while an approximate Bayesian computation analysis indicated that the two studied oak species probably split at about 17.80–28.48 Ma. A comparison of two core bioclimatic factors and ecological niche tests revealed strong niche differentiation between the two oak species, and association analysis also found a significantly positive correlation between interspecific genetic variations and bioclimatic distances. Additionally, analyses of the leaf morphology of 117 specimens with five quantitative characteristics showed clear species discrepancy between Q. baronii and Q. dolicholepis. Based on this evidence from genetic, ecological and phenotypic analyses, our research indicated clear species differentiation between Q. baronii and Q. dolicholepis, possibly in relation to an early species divergence and varying adaptative features of the two oaks shaped by heterogeneous environments within Qinling-Daba Mountains and surroundings. This study provides an example for future investigation of species differentiation and evolution among related oak species with integrated analyses and highlights the importance of ecological conditions on adaptive evolution and genetic conservation of endemic tree species in montane regions. Full article

Soil calcium is a vital component in plant growth and soil health. Earthworm activities impact metal distribution and speciation a lot by changing soil pH. Nevertheless, little is known about how ecological earthworm species, particularly in Terra Rossa soil, affect soil Ca speciation distribution. This research examined the effects of the activities of four different earthworm species (epigeic species Eisenia fetida (noted as EF), endogeic species Amynthas robustus (noted as AR) and Pontoscolex corethrurus (noted as PC), anecic species Amynthas aspergillum (noted as AA)) on Ca speciations (water-soluble (Ca_Ws), exchangeable (Ca_Ex), acid-soluble bound (Ca_Ac), organic-bound (Ca_Or), and residual (Ca_Re)), soil pH, the release contents of exchangeable cations (Ca, Mg, K, and Na), total calcium (Ca_Total) contents, total nitrogen (TN) contents, soil organic carbon (SOC) concentrations, cation-exchange capacity (CEC), and NIRS spectral characteristics in Terra Rossa soil for 40 days under lab conditions. In contrast to control soil, 108.3%, 158.3%, 91.7%, and 125.0% of Ca_Ws contents in casts and 116.6%, 108.3%, 58.3% and 91.6% of Ca_Ws in uningested soil increased significantly with the inoculation of EF, PC, AR, and AA, respectively. In addition, compared with control, for casts, the contents of exchangeable Ca, Mg, K, CEC, and available-K were significantly increased in the presence of EF, PC, AR, and AA, respectively. In the casts of EF, PC, AR, and AA, soil pH values declined by 0.72, 0.80, 0.45, and 0.60 units relative to control soil, while they decreased by 0.65, 0.84, 0.34, and 0.59 units in uningested soil. The soil inoculated with PC had higher soil pH values and Ca_Ws contents than those with the other three earthworm species. Principal component analysis revealed significant differences in soil pH, Ca speciation, NIR spectra, and exchangeable base cation release between casts and uningested soil in treatments with EF, PC, AR, and AA inoculation. These findings expand, for the first time, to the ecological functions of earthworm species, especially for PC, demonstrating a capacity to alter soil Ca speciation, decrease soil pH, affect the exchangeable base cations’ release, and participate in and regulate the geochemical circulation processes in limestone regions. Full article

In order to comprehensively understand the content, source, speciation characteristics, and risk of heavy metals in cultivated soil of Pingshui Village, Zhaoping County, Hezhou City, this study conducted measurements on the total amounts of Cr, Ni, Cu, Zn, As, Cd, Pb, and Hg in 34 soil samples within the study area. Correlation analysis and principal component analysis were employed to investigate their sources. An improved BCR sequential extraction procedure was utilized to analyze the occurrence forms of eight heavy metals in soil samples. Ecological risks were evaluated using the geo-accumulation index (I_geo), potential ecological risk index (RI), and risk assessment code (RAC). The findings revealed that: (1) The soil heavy metals in the study area exhibited varying degrees of enrichment, primarily attributed to anthropogenic activities. (2) There was no significant difference in the speciation characteristics of the eight heavy metals in the soil of each sampling site in the study area, and the main components were all residual fraction, and the mild acid-soluble fraction of Cd and Zn accounted for a relatively high proportion in individual sampling sites, which should be paid attention to. (3) Through the results of three risk assessment methods, it is concluded that the heavy metal pollution of soil in the study area is serious, and continuous attention should be paid to the corresponding pollution prevention measures. Full article