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Keywords = crop surface model (CSM)

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21 pages, 10577 KB  
Article
Evaluation of Sugarcane Crop Growth Monitoring Using Vegetation Indices Derived from RGB-Based UAV Images and Machine Learning Models
by P. P. Ruwanpathirana, Kazuhito Sakai, G. Y. Jayasinghe, Tamotsu Nakandakari, Kozue Yuge, W. M. C. J. Wijekoon, A. C. P. Priyankara, M. D. S. Samaraweera and P. L. A. Madushanka
Agronomy 2024, 14(9), 2059; https://doi.org/10.3390/agronomy14092059 - 9 Sep 2024
Cited by 15 | Viewed by 4679
Abstract
Crop monitoring with unmanned aerial vehicles (UAVs) has the potential to reduce field monitoring costs while increasing monitoring frequency and improving efficiency. However, the utilization of RGB-based UAV imagery for crop-specific monitoring, especially for sugarcane, remains limited. This work proposes a UAV platform [...] Read more.
Crop monitoring with unmanned aerial vehicles (UAVs) has the potential to reduce field monitoring costs while increasing monitoring frequency and improving efficiency. However, the utilization of RGB-based UAV imagery for crop-specific monitoring, especially for sugarcane, remains limited. This work proposes a UAV platform with an RGB camera as a low-cost solution to monitor sugarcane fields, complementing the commonly used multi-spectral methods. This new approach optimizes the RGB vegetation indices for accurate prediction of sugarcane growth, providing many improvements in scalable crop-management methods. The images were captured by a DJI Mavic Pro drone. Four RGB vegetation indices (VIs) (GLI, VARI, GRVI, and MGRVI) and the crop surface model plant height (CSM_PH) were derived from the images. The fractional vegetation cover (FVC) values were compared by image classification. Sugarcane plant height predictions were generated using two machine learning (ML) algorithms—multiple linear regression (MLR) and random forest (RF)—which were compared across five predictor combinations (CSM_PH and four VIs). At the early stage, all VIs showed significantly lower values than later stages (p < 0.05), indicating an initial slow progression of crop growth. MGRVI achieved a classification accuracy of over 94% across all growth phases, outperforming traditional indices. Based on the feature rankings, VARI was the least sensitive parameter, showing the lowest correlation (r < 0.5) and mutual information (MI < 0.4). The results showed that the RF and MLR models provided better predictions for plant height. The best estimation results were observed withthe combination of CSM_PH and GLI utilizing RF model (R2 = 0.90, RMSE = 0.37 m, MAE = 0.27 m, and AIC = 21.93). This study revealed that VIs and the CSM_PH derived from RGB images captured by UAVs could be useful in monitoring sugarcane growth to boost crop productivity. Full article
(This article belongs to the Section Precision and Digital Agriculture)
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19 pages, 6553 KB  
Article
Evaluation of Gridded Meteorological Data for Crop Sensitivity Assessment to Temperature Changes: An Application with CERES-Wheat in the Mediterranean Basin
by Konstantina S. Liakopoulou and Theodoros Mavromatis
Climate 2023, 11(9), 180; https://doi.org/10.3390/cli11090180 - 29 Aug 2023
Cited by 4 | Viewed by 3361
Abstract
In areas with a limited or non-existent network of observing stations, it is critical to assess the applicability of gridded datasets. This study examined the agreement of Agri4Cast and E-OBS at two spatial resolutions (10 km (EOBS-0.1) and 25 km (EOBS-0.25)) in 13 [...] Read more.
In areas with a limited or non-existent network of observing stations, it is critical to assess the applicability of gridded datasets. This study examined the agreement of Agri4Cast and E-OBS at two spatial resolutions (10 km (EOBS-0.1) and 25 km (EOBS-0.25)) in 13 Mediterranean stations nearby to wheat crops and how this agreement may influence simulated potential development and production with the crop simulation model (CSM) CERES-Wheat in historical and near-future (2021–2040) (NF) periods. A wide range of sensitivity tests for maximum and minimum air temperatures and impact response surfaces were used for the future projections. EOBS-0.1 showed the lowest discrepancies over observations. It underestimated statistical measures of temperature and precipitation raw data and their corresponding extreme indices and overestimated solar radiation. These discrepancies caused small delays (5–6 days, on average) in crop development and overestimations (8%) in grain production in the reference period. In the NF, the use of EOBS-0.1 reduced by a few (2–3) days the biases in crop development, while yield responses differed among stations. This research demonstrated the ability of EOBS-0.1 for agricultural applications that depend on potential wheat development and productivity in historical and future climate conditions expected in the Mediterranean basin. Full article
(This article belongs to the Special Issue Climate Change Impacts at Various Geographical Scales (2nd Edition))
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20 pages, 2584 KB  
Article
CSM-CERES-Wheat Sensitivity to Evapotranspiration Modeling Frameworks under a Range of Wind Speeds
by Milad Nouri, Gerrit Hoogenboom, Mohammad Bannayan and Mehdi Homaee
Water 2022, 14(19), 3023; https://doi.org/10.3390/w14193023 - 26 Sep 2022
Cited by 7 | Viewed by 2574
Abstract
Crop modeling uncertainty is expected to be high under weather data limitations; thus, jeopardizing decision-making on food-water security. Missing near-surface wind speed (u2) data required to accurately estimate reference evapotranspiration (ETo) seemed to significantly affect both the potential evapotranspiration [...] Read more.
Crop modeling uncertainty is expected to be high under weather data limitations; thus, jeopardizing decision-making on food-water security. Missing near-surface wind speed (u2) data required to accurately estimate reference evapotranspiration (ETo) seemed to significantly affect both the potential evapotranspiration (ETP) and yield simulations for data-scarce windy regions. In this study, the uncertainty in crop modeling based on different ETP approaches was assessed. In this regard, wheat yield and evapotranspiration were simulated with the CSM-CERES-Wheat model using either the Priestley-Taylor/Ritchie (PT) or the Penman-Monteith DSSAT (PM) methods under “rain-fed, low-nitrogen stress”, “rain-fed, high nitrogen stress”, “full irrigation, low nitrogen stress”, and “full irrigation, high nitrogen stress” scenarios for a u2 range from 0.8 to 3.5 m s−1. The daily weather data required to run the model were retrieved from 18 semi-arid areas located in western Iran. The statistically significant differences in mean yield and cumulative distribution were determined by the non-parametric Wilcoxon signed-rank and the Kolmogorov-Smirnov tests, respectively. The deviation in evaporation and transpiration simulated by applying PT and PM was lower under rain-fed condition. Under “rain-fed, low-nitrogen stress”, the PT-simulated yield deviated significantly (p < 0.05) from PM-simulated yield by more than 26% for the sites with u2 above 3 m s−1. The deviation in ETP estimates did not, however, lead to statistically significant difference in yield distribution curves for almost all sites and scenarios. Nitrogen deficiency resulted in a smaller difference in yield for rain-fed condition. The yield results showed a deviation below 6% under full irrigation condition. Under windy rain-fed condition, high deviation in leaf area index (LAI) and ETP estimates caused a large difference in the actual transpiration to potential transpiration ratio (Ta/TP), and yield. However, the deviation between PT- and PM-simulated LAI and Ta/TP for the full irrigation scenarios was less than 6%. Overall, the results from this study indicate that when soil moisture is depleted, resembling rain-fed condition, simulation of yield appears to be highly sensitive to the estimation of ETP for windy areas. Full article
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17 pages, 7341 KB  
Article
Assessing the Temporal and Spatial Variability of Coffee Plantation Using RPA-Based RGB Imaging
by Maurício Martello, José Paulo Molin, Graciele Angnes and Matheus Gabriel Acorsi
Drones 2022, 6(10), 267; https://doi.org/10.3390/drones6100267 - 21 Sep 2022
Cited by 5 | Viewed by 2929
Abstract
The biophysical parameters of coffee plants can provide important information to guide crop management. An alternative to traditional methods of sparse hand measurements to obtain this type of information can be the 3D modeling of the coffee canopy using aerial images from RGB [...] Read more.
The biophysical parameters of coffee plants can provide important information to guide crop management. An alternative to traditional methods of sparse hand measurements to obtain this type of information can be the 3D modeling of the coffee canopy using aerial images from RGB cameras attached to remotely piloted aircraft (RPA). This study aimed to explore the use of RGB aerial images to obtain 3D information of coffee crops, deriving plant height and volume information together with yield data during three growing seasons in a commercial production area of 10.24 ha, Minas Gerais state, Brazil. Seven data acquisition campaigns were conducted during the years 2019, 2020 and 2021. The flights were made at 70 m above ground level, with lateral and longitudinal overlaps of 75% and 80%, respectively. The images were processed, obtaining canopy surface models (CSMs) derived into plant height and volume data for each campaign. The results showed that it is possible to extract the plant height of coffee plants with an R2 of 0.86 and an RMSE of 0.4 m. It was possible to monitor the temporal variability of coffee plant height and volume based on aerial images and correlate this information with yield data. The results of the modeling analysis demonstrated the possibility of using these variables to help understand the spatial variability of coffee yield within the field. Full article
(This article belongs to the Special Issue Yield Prediction Using Data from Unmanned Aerial Vehicles)
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24 pages, 7214 KB  
Article
Above-Ground Biomass Estimation in Oats Using UAV Remote Sensing and Machine Learning
by Prakriti Sharma, Larry Leigh, Jiyul Chang, Maitiniyazi Maimaitijiang and Melanie Caffé
Sensors 2022, 22(2), 601; https://doi.org/10.3390/s22020601 - 13 Jan 2022
Cited by 78 | Viewed by 7925
Abstract
Current strategies for phenotyping above-ground biomass in field breeding nurseries demand significant investment in both time and labor. Unmanned aerial vehicles (UAV) can be used to derive vegetation indices (VIs) with high throughput and could provide an efficient way to predict forage yield [...] Read more.
Current strategies for phenotyping above-ground biomass in field breeding nurseries demand significant investment in both time and labor. Unmanned aerial vehicles (UAV) can be used to derive vegetation indices (VIs) with high throughput and could provide an efficient way to predict forage yield with high accuracy. The main objective of the study is to investigate the potential of UAV-based multispectral data and machine learning approaches in the estimation of oat biomass. UAV equipped with a multispectral sensor was flown over three experimental oat fields in Volga, South Shore, and Beresford, South Dakota, USA, throughout the pre- and post-heading growth phases of oats in 2019. A variety of vegetation indices (VIs) derived from UAV-based multispectral imagery were employed to build oat biomass estimation models using four machine-learning algorithms: partial least squares (PLS), support vector machine (SVM), Artificial neural network (ANN), and random forest (RF). The results showed that several VIs derived from the UAV collected images were significantly positively correlated with dry biomass for Volga and Beresford (r = 0.2–0.65), however, in South Shore, VIs were either not significantly or weakly correlated with biomass. For Beresford, approximately 70% of the variance was explained by PLS, RF, and SVM validation models using data collected during the post-heading phase. Likewise for Volga, validation models had lower coefficient of determination (R2 = 0.20–0.25) and higher error (RMSE = 700–800 kg/ha) than training models (R2 = 0.50–0.60; RMSE = 500–690 kg/ha). In South Shore, validation models were only able to explain approx. 15–20% of the variation in biomass, which is possibly due to the insignificant correlation values between VIs and biomass. Overall, this study indicates that airborne remote sensing with machine learning has potential for above-ground biomass estimation in oat breeding nurseries. The main limitation was inconsistent accuracy in model prediction across locations. Multiple-year spectral data, along with the inclusion of textural features like crop surface model (CSM) derived height and volumetric indicators, should be considered in future studies while estimating biophysical parameters like biomass. Full article
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19 pages, 8084 KB  
Article
Spatio-Temporal Estimation of Biomass Growth in Rice Using Canopy Surface Model from Unmanned Aerial Vehicle Images
by Clement Oppong Peprah, Megumi Yamashita, Tomoaki Yamaguchi, Ryo Sekino, Kyohei Takano and Keisuke Katsura
Remote Sens. 2021, 13(12), 2388; https://doi.org/10.3390/rs13122388 - 18 Jun 2021
Cited by 20 | Viewed by 4397
Abstract
The awareness of spatial and temporal variations in site-specific crop parameters, such as aboveground biomass (total dry weight: (TDW), plant length (PL) and leaf area index (LAI), help in formulating appropriate management decisions. However, conventional monitoring methods rely on time-consuming manual field operations. [...] Read more.
The awareness of spatial and temporal variations in site-specific crop parameters, such as aboveground biomass (total dry weight: (TDW), plant length (PL) and leaf area index (LAI), help in formulating appropriate management decisions. However, conventional monitoring methods rely on time-consuming manual field operations. In this study, the feasibility of using an unmanned aerial vehicle (UAV)-based remote sensing approach for monitoring growth in rice was evaluated using a digital surface model (DSM). Approximately 160 images of paddy fields were captured during each UAV survey campaign over two vegetation seasons. The canopy surface model (CSM) was developed based on the differences observed between each DSM and the first DSM after transplanting. Mean canopy height (CH) was used as a variable for the estimation models of LAI and TDW. The mean CSM of the mesh covering several hills was sufficient to explain the PL (R2 = 0.947). TDW and LAI prediction accuracy of the model were high (relative RMSE of 20.8% and 28.7%, and RMSE of 0.76 m2 m−2 and 141.4 g m−2, respectively) in the rice varieties studied (R2 = 0.937 (Basmati370), 0.837 (Nipponbare and IR64) for TDW, and 0.894 (Basmati370), 0.866 (Nipponbare and IR64) for LAI). The results of this study support the assertion of the benefits of DSM-derived CH for predicting biomass development. In addition, LAI and TDW could be estimated temporally and spatially using the UAV-based CSM, which is not easily affected by weather conditions. Full article
(This article belongs to the Special Issue UAV Imagery for Precision Agriculture)
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15 pages, 4397 KB  
Article
Correlating the Plant Height of Wheat with Above-Ground Biomass and Crop Yield Using Drone Imagery and Crop Surface Model, A Case Study from Nepal
by Uma Shankar Panday, Nawaraj Shrestha, Shashish Maharjan, Arun Kumar Pratihast, Shahnawaz, Kundan Lal Shrestha and Jagannath Aryal
Drones 2020, 4(3), 28; https://doi.org/10.3390/drones4030028 - 1 Jul 2020
Cited by 47 | Viewed by 10258
Abstract
Food security is one of the burning issues in the 21st century, as a tremendous population growth over recent decades has increased demand for food production systems. However, agricultural production is constrained by the limited availability of arable land resources, whereas a significant [...] Read more.
Food security is one of the burning issues in the 21st century, as a tremendous population growth over recent decades has increased demand for food production systems. However, agricultural production is constrained by the limited availability of arable land resources, whereas a significant part of these is already degraded due to overexploitation. In order to get optimum output from the available land resources, it is of prime importance that crops are monitored, analyzed, and mapped at various stages of growth so that the areas having underdeveloped/unhealthy plants can be treated appropriately as and when required. This type of monitoring can be performed using ultra-high-resolution earth observation data like the images captured through unmanned aerial vehicles (UAVs)/drones. The objective of this research is to estimate and analyze the above-ground biomass (AGB) of the wheat crop using a consumer-grade red-green-blue (RGB) camera mounted on a drone. AGB and yield of wheat were estimated from linear regression models involving plant height obtained from crop surface models (CSMs) derived from the images captured by the drone-mounted camera. This study estimated plant height in an integrated setting of UAV-derived images with a Mid-Western Terai topographic setting (67 to 300 m amsl) of Nepal. Plant height estimated from the drone images had an error of 5% to 11.9% with respect to direct field measurement. While R2 of 0.66 was found for AGB, that of 0.73 and 0.70 were found for spike and grain weights respectively. This statistical quality assurance contributes to crop yield estimation, and hence to develop efficient food security strategies using earth observation and geo-information. Full article
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14 pages, 3345 KB  
Article
Estimating Biomass of Black Oat Using UAV-Based RGB Imaging
by Matheus Gabriel Acorsi, Fabiani das Dores Abati Miranda, Maurício Martello, Danrley Antonio Smaniotto and Laercio Ricardo Sartor
Agronomy 2019, 9(7), 344; https://doi.org/10.3390/agronomy9070344 - 29 Jun 2019
Cited by 49 | Viewed by 6352
Abstract
The spatial and temporal variability of crop parameters are fundamental in precision agriculture. Remote sensing of crop canopy can provide important indications on the growth variability and help understand the complex factors influencing crop yield. Plant biomass is considered an important parameter for [...] Read more.
The spatial and temporal variability of crop parameters are fundamental in precision agriculture. Remote sensing of crop canopy can provide important indications on the growth variability and help understand the complex factors influencing crop yield. Plant biomass is considered an important parameter for crop management and yield estimation, especially for grassland and cover crops. A recent approach introduced to model crop biomass consists in the use of RGB (red, green, blue) stereo images acquired from unmanned aerial vehicles (UAV) coupled with photogrammetric softwares to predict biomass through plant height (PHT) information. In this study, we generated prediction models for fresh (FBM) and dry biomass (DBM) of black oat crop based on multi-temporal UAV RGB imaging. Flight missions were carried during the growing season to obtain crop surface models (CSMs), with an additional flight before sowing to generate a digital terrain model (DTM). During each mission, 30 plots with a size of 0.25 m² were distributed across the field to carry ground measurements of PHT and biomass. Furthermore, estimation models were established based on PHT derived from CSMs and field measurements, which were later used to build prediction maps of FBM and DBM. The study demonstrates that UAV RGB imaging can precisely estimate canopy height (R2 = 0.68–0.92, RMSE = 0.019–0.037 m) during the growing period. FBM and DBM models using PHT derived from UAV imaging yielded R2 values between 0.69 and 0.94 when analyzing each mission individually, with best results during the flowering stage (R2 = 0.92–0.94). Robust models using datasets from different growth stages were built and tested using cross-validation, resulting in R2 values of 0.52 for FBM and 0.84 for DBM. Prediction maps of FBM and DBM yield were obtained using calibrated models applied to CSMs, resulting in a feasible way to illustrate the spatial and temporal variability of biomass. Altogether the results of the study demonstrate that UAV RGB imaging can be a useful tool to predict and explore the spatial and temporal variability of black oat biomass, with potential use in precision farming. Full article
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14 pages, 2285 KB  
Article
Evaluation of Silage Corn Yield Gap: An Approach for Sustainable Production in the Semi-Arid Region of USA
by Abdelaziz Nilahyane, M. Anowarul Islam, Abdel O. Mesbah and Axel Garcia y Garcia
Sustainability 2018, 10(7), 2523; https://doi.org/10.3390/su10072523 - 19 Jul 2018
Cited by 10 | Viewed by 4109
Abstract
Water and nitrogen (N) play an important role in closing the yield gap of crops by reducing associated stresses and yield variability. Field research data coupled to the CSM-CERES-Maize model of Decision Support System Agrotechnology Transfer were used to advance our understanding of [...] Read more.
Water and nitrogen (N) play an important role in closing the yield gap of crops by reducing associated stresses and yield variability. Field research data coupled to the CSM-CERES-Maize model of Decision Support System Agrotechnology Transfer were used to advance our understanding of the effect of water and N on silage corn growth and yield. The objectives of the study were to determine: (i) the best combination of irrigation water and N for optimum biomass yield, and (ii) the yield gap of silage corn grown at different locations in Wyoming, USA. Field experiments were conducted under sub-surface drip irrigation using a randomized complete block design in a split-plot arrangement with four replications. The main plot was irrigation and consisted of 100% crop evapotranspiration (100ETc), 80% (80ETc), and 60% (60ETc), and the sub-plot was N rates, including 0, 90, 180, 270, and 360 kg N ha−1 as urea-ammonium-nitrate. The simulated results indicated full irrigation and at least 150 kg N ha−1 as the best combination for silage corn production in Wyoming. Our observed and simulated results show the potential to increase the biomass and reduce the yield gap of silage corn in the region if irrigation water and N are properly managed. Full article
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24 pages, 8308 KB  
Article
A Comparison of Crop Parameters Estimation Using Images from UAV-Mounted Snapshot Hyperspectral Sensor and High-Definition Digital Camera
by Jibo Yue, Haikuan Feng, Xiuliang Jin, Huanhuan Yuan, Zhenhai Li, Chengquan Zhou, Guijun Yang and Qingjiu Tian
Remote Sens. 2018, 10(7), 1138; https://doi.org/10.3390/rs10071138 - 18 Jul 2018
Cited by 173 | Viewed by 11402
Abstract
Timely and accurate estimates of crop parameters are crucial for agriculture management. Unmanned aerial vehicles (UAVs) carrying sophisticated cameras are very pertinent for this work because they can obtain remote-sensing images with higher temporal, spatial, and ground resolution than satellites. In this study, [...] Read more.
Timely and accurate estimates of crop parameters are crucial for agriculture management. Unmanned aerial vehicles (UAVs) carrying sophisticated cameras are very pertinent for this work because they can obtain remote-sensing images with higher temporal, spatial, and ground resolution than satellites. In this study, we evaluated (i) the performance of crop parameters estimates using a near-surface spectroscopy (350~2500 nm, 3 nm at 700 nm, 8.5 nm at 1400 nm, 6.5 nm at 2100 nm), a UAV-mounted snapshot hyperspectral sensor (450~950 nm, 8 nm at 532 nm) and a high-definition digital camera (Visible, R, G, B); (ii) the crop surface models (CSMs), RGB-based vegetation indices (VIs), hyperspectral-based VIs, and methods combined therefrom to make multi-temporal estimates of crop parameters and to map the parameters. The estimated leaf area index (LAI) and above-ground biomass (AGB) are obtained by using linear and exponential equations, random forest (RF) regression, and partial least squares regression (PLSR) to combine the UAV based spectral VIs and crop heights (from the CSMs). The results show that: (i) spectral VIs correlate strongly with LAI and AGB over single growing stages when crop height correlates positively with AGB over multiple growth stages; (ii) the correlation between the VIs multiplying crop height and AGB is greater than that between a single VI and crop height; (iii) the AGB estimate from the UAV-mounted snapshot hyperspectral sensor and high-definition digital camera is similar to the results from the ground spectrometer when using the combined methods (i.e., using VIs multiplying crop height, RF and PLSR to combine VIs and crop heights); and (iv) the spectral performance of the sensors is crucial in LAI estimates (the wheat LAI cannot be accurately estimated over multiple growing stages when using only crop height). The LAI estimates ranked from best to worst are ground spectrometer, UAV snapshot hyperspectral sensor, and UAV high-definition digital camera. Full article
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16 pages, 5858 KB  
Article
Estimating Barley Biomass with Crop Surface Models from Oblique RGB Imagery
by Sebastian Brocks and Georg Bareth
Remote Sens. 2018, 10(2), 268; https://doi.org/10.3390/rs10020268 - 9 Feb 2018
Cited by 77 | Viewed by 7985
Abstract
Non-destructive monitoring of crop development is of key interest for agronomy and crop breeding. Crop Surface Models (CSMs) representing the absolute height of the plant canopy are a tool for this. In this study, fresh and dry barley biomass per plot are estimated [...] Read more.
Non-destructive monitoring of crop development is of key interest for agronomy and crop breeding. Crop Surface Models (CSMs) representing the absolute height of the plant canopy are a tool for this. In this study, fresh and dry barley biomass per plot are estimated from CSM-derived plot-wise plant heights. The CSMs are generated in a semi-automated manner using Structure-from-Motion (SfM)/Multi-View-Stereo (MVS) software from oblique stereo RGB images. The images were acquired automatedly from consumer grade smart cameras mounted at an elevated position on a lifting hoist. Fresh and dry biomass were measured destructively at four dates each in 2014 and 2015. We used exponential and simple linear regression based on different calibration/validation splits. Coefficients of determination R 2 between 0.55 and 0.79 and root mean square errors (RMSE) between 97 and 234 g/m2 are reached for the validation of predicted vs. observed dry biomass, while Willmott’s refined index of model performance d r ranges between 0.59 and 0.77. For fresh biomass, R 2 values between 0.34 and 0.61 are reached, with root mean square errors (RMSEs) between 312 and 785 g/m2 and d r between 0.39 and 0.66. We therefore established the possibility of using this novel low-cost system to estimate barley dry biomass over time. Full article
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17 pages, 4439 KB  
Article
Poppy Crop Height and Capsule Volume Estimation from a Single UAS Flight
by Faheem Iqbal, Arko Lucieer, Karen Barry and Reuben Wells
Remote Sens. 2017, 9(7), 647; https://doi.org/10.3390/rs9070647 - 22 Jun 2017
Cited by 43 | Viewed by 9820
Abstract
The objective of this study was to estimate poppy plant height and capsule volume with remote sensing using an Unmanned Aircraft System (UAS). Data were obtained from field measurements and UAS flights over two poppy crops at Cambridge and Cressy in Tasmania. Imagery [...] Read more.
The objective of this study was to estimate poppy plant height and capsule volume with remote sensing using an Unmanned Aircraft System (UAS). Data were obtained from field measurements and UAS flights over two poppy crops at Cambridge and Cressy in Tasmania. Imagery acquired from the UAS was used to produce dense point clouds using structure from motion (SfM) and multi-view stereopsis (MVS) techniques. Dense point clouds were used to generate a digital surface model (DSM) and orthophoto mosaic. An RGB index was derived from the orthophoto to extract the bare ground spaces. This bare ground space mask was used to filter the points on the ground, and a digital terrain model (DTM) was interpolated from these points. Plant height values were estimated by subtracting the DSM and DTM to generate a Crop Height Model (CHM). UAS-derived plant height (PH) and field measured PH in Cambridge were strongly correlated with R2 values ranging from 0.93 to 0.97 for Transect 1 and Transect 2, respectively, while at Cressy results from a single flight provided R2 of 0.97. Therefore, the proposed method can be considered an important step towards crop surface model (CSM) generation from a single UAS flight in situations where a bare ground DTM is unavailable. High correlations were found between UAS-derived PH and poppy capsule volume (CV) at capsule formation stage (R2 0.74), with relative error of 19.62%. Results illustrate that plant height can be reliably estimated for poppy crops based on a single UAS flight and can be used to predict opium capsule volume at capsule formation stage. Full article
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21 pages, 8393 KB  
Article
The DOM Generation and Precise Radiometric Calibration of a UAV-Mounted Miniature Snapshot Hyperspectral Imager
by Guijun Yang, Changchun Li, Yanjie Wang, Huanhuan Yuan, Haikuan Feng, Bo Xu and Xiaodong Yang
Remote Sens. 2017, 9(7), 642; https://doi.org/10.3390/rs9070642 - 22 Jun 2017
Cited by 88 | Viewed by 9959
Abstract
Hyperspectral remote sensing is used in precision agriculture to remotely and quickly acquire crop phenotype information. This paper describes the generation of a digital orthophoto map (DOM) and radiometric calibration for images taken by a miniaturized snapshot hyperspectral camera mounted on a lightweight [...] Read more.
Hyperspectral remote sensing is used in precision agriculture to remotely and quickly acquire crop phenotype information. This paper describes the generation of a digital orthophoto map (DOM) and radiometric calibration for images taken by a miniaturized snapshot hyperspectral camera mounted on a lightweight unmanned aerial vehicle (UAV). The snapshot camera is a relatively new type of hyperspectral sensor that can acquire an image cube with one spectral and two spatial dimensions at one exposure. The images acquired by the hyperspectral snapshot camera need to be mosaicked together to produce a DOM and radiometrically calibrated before analysis. However, the spatial resolution of hyperspectral cubes is too low to mosaic the images together. Furthermore, there are no systematic radiometric calibration methods or procedures for snapshot hyperspectral images acquired from low-altitude carrier platforms. In this study, we obtained hyperspectral imagery using a snapshot hyperspectral sensor mounted on a UAV. We quantitatively evaluated the radiometric response linearity (RRL) and radiometric response variation (RRV) and proposed a method to correct the RRV effect. We then introduced a method to interpolate position and orientation system (POS) information and generate a DOM with low spatial resolution and a digital elevation model (DEM) using a 3D mesh model built from panchromatic images with high spatial resolution. The relative horizontal geometric precision of the DOM was validated by comparison with a DOM generated from a digital RGB camera. A surface crop model (CSM) was produced from the DEM, and crop height for 48 sampling plots was extracted and compared with the corresponding field-measured crop height to verify the relative precision of the DEM. Finally, we applied two absolute radiometric calibration methods to the generated DOM and verified their accuracy via comparison with spectra measured with an ASD Field Spec Pro spectrometer (Analytical Spectral Devices, Boulder, CO, USA). The DOM had high relative horizontal accuracy, and compared with the digital camera-derived DOM, spatial differences were below 0.05 m (RMSE = 0.035). The determination coefficient for a regression between DEM-derived and field-measured crop height was 0.680. The radiometric precision was 5% for bands between 500 and 945 nm, and the reflectance curve in the infrared spectral region did not decrease as in previous research. The pixel and data sizes for the DOM corresponding to a field area of approximately 85 m × 34 m were small (0.67 m and approximately 13.1 megabytes, respectively), which is convenient for data transmission, preprocessing and analysis. The proposed method for radiometric calibration and DOM generation from hyperspectral cubes can be used to yield hyperspectral imagery products for various applications, particularly precision agriculture. Full article
(This article belongs to the Special Issue Earth Observations for Precision Farming in China (EO4PFiC))
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23 pages, 1131 KB  
Article
Transferability of Models for Estimating Paddy Rice Biomass from Spatial Plant Height Data
by Nora Tilly, Dirk Hoffmeister, Qiang Cao, Victoria Lenz-Wiedemann, Yuxin Miao and Georg Bareth
Agriculture 2015, 5(3), 538-560; https://doi.org/10.3390/agriculture5030538 - 23 Jul 2015
Cited by 39 | Viewed by 9897
Abstract
It is known that plant height is a suitable parameter for estimating crop biomass. The aim of this study was to confirm the validity of spatial plant height data, which is derived from terrestrial laser scanning (TLS), as a non-destructive estimator for biomass [...] Read more.
It is known that plant height is a suitable parameter for estimating crop biomass. The aim of this study was to confirm the validity of spatial plant height data, which is derived from terrestrial laser scanning (TLS), as a non-destructive estimator for biomass of paddy rice on the field scale. Beyond that, the spatial and temporal transferability of established biomass regression models were investigated to prove the robustness of the method and evaluate the suitability of linear and exponential functions. In each growing season of two years, three campaigns were carried out on a field experiment and on a farmer’s conventionally managed field. Crop surface models (CSMs) were generated from the TLS-derived point clouds for calculating plant height with a very high spatial resolution of 1 cm. High coefficients of determination between CSM-derived and manually measured plant heights (R2: 0.72 to 0.91) confirm the applicability of the approach. Yearly averaged differences between the measurements were ~7% and ~9%. Biomass regression models were established from the field experiment data sets, based on strong coefficients of determination between plant height and dry biomass (R2: 0.66 to 0.86 and 0.65 to 0.84 for linear and exponential models, respectively). The spatial and temporal transferability of the models to the farmer’s conventionally managed fields is supported by strong coefficients of determination between estimated and measured values (R2: 0.60 to 0.90 and 0.56 to 0.85 for linear and exponential models, respectively). Hence, the suitability of TLS-derived spatial plant height as a non-destructive estimator for biomass of paddy rice on the field scale was verified and the transferability demonstrated. Full article
(This article belongs to the Special Issue Remote Sensing for Crop Production and Management)
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19 pages, 3478 KB  
Article
Effects of Reduced Terrestrial LiDAR Point Density on High-Resolution Grain Crop Surface Models in Precision Agriculture
by Martin Hämmerle and Bernhard Höfle
Sensors 2014, 14(12), 24212-24230; https://doi.org/10.3390/s141224212 - 16 Dec 2014
Cited by 52 | Viewed by 11066
Abstract
3D geodata play an increasingly important role in precision agriculture, e.g., for modeling in-field variations of grain crop features such as height or biomass. A common data capturing method is LiDAR, which often requires expensive equipment and produces large datasets. This study contributes [...] Read more.
3D geodata play an increasingly important role in precision agriculture, e.g., for modeling in-field variations of grain crop features such as height or biomass. A common data capturing method is LiDAR, which often requires expensive equipment and produces large datasets. This study contributes to the improvement of 3D geodata capturing efficiency by assessing the effect of reduced scanning resolution on crop surface models (CSMs). The analysis is based on high-end LiDAR point clouds of grain crop fields of different varieties (rye and wheat) and nitrogen fertilization stages (100%, 50%, 10%). Lower scanning resolutions are simulated by keeping every n-th laser beam with increasing step widths n. For each iteration step, high-resolution CSMs (0.01 m2 cells) are derived and assessed regarding their coverage relative to a seamless CSM derived from the original point cloud, standard deviation of elevation and mean elevation. Reducing the resolution to, e.g., 25% still leads to a coverage of >90% and a mean CSM elevation of >96% of measured crop height. CSM types (maximum elevation or 90th-percentile elevation) react differently to reduced scanning resolutions in different crops (variety, density). The results can help to assess the trade-off between CSM quality and minimum requirements regarding equipment and capturing set-up. Full article
(This article belongs to the Special Issue Agriculture and Forestry: Sensors, Technologies and Procedures)
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