Search Results (23)

Sucrose phosphate synthase (SPS) is a rate-limiting enzyme in plant sucrose biosynthesis. However, the SPS gene family in luffa remains unidentified, and its functional involvement in sugar metabolism is unexplored. Here, we present the first genome-wide identification and functional analysis of the LaSPSs in luffa. We identified nine LaSPS genes, characterized their physicochemical and evolutionary properties, and analyzed their expression patterns in different tissues and response to ethylene and drought treatments. Nine tandem-duplicated LaSPS genes formed four clusters (T1(1/2), T2(3/4), T3(5/6), T4(7–9)) with conserved architectures. RNA-seq analysis indicated a ubiquitous downregulation of LaSPS genes in senescing luffa, wherein sucrose content correlated significantly with all LaSPS members except LaSPS1/2. Exogenous ethylene substantially repressed LaSPSs transcription, while 1-methylcyclopropene (1-MCP) treatment showed induction. Notably, LaSPS3/4 displayed high activation under drought stress. Functional validation via heterologous expression in tobacco confirmed that LaSPS3/4 positively regulates drought resistance. In summary, this study provides a novel perspective for the in-depth investigation of the molecular evolutionary mechanism of the LaSPS gene family and its biological functions in luffa. Full article

Plant growth, a fundamental biological process that underpins terrestrial ecosystem function, is susceptible to nutrient availability. Despite extensive research on lowland ecosystems, the responses of alpine plant growth to nutrient addition remain poorly understood, particularly given the heightened sensitivity of alpine ecosystems to global change. To investigate the effects of nitrogen (N) and phosphorus (P) additions on the growth rates of alpine plants and the underlying mechanisms of how these nutrient additions influence plant growth rates, we conducted an experiment in an alpine grassland on the Qinghai–Tibet Plateau, targeting 14 common plant species. Growth rates were measured using biomass and height, with plant height and soil physicochemical properties recorded biweekly during the growing season. We assessed the effects of nitrogen and phosphorus additions on growth rates, their seasonal dynamics, and their relationships with soil physicochemical properties. Results showed that phosphorus addition and combined nitrogen-phosphorus additions significantly increased the relative growth rate based on height (RGR_H). In contrast, nutrient additions had no significant effect on the relative growth rate based on biomass (RGR_B). RGR_H decreased from June and early July to August, exhibiting species-specific responses to nutrient additions. Additionally, RGR_H was significantly influenced by the interaction of nitrogen and phosphorus additions, species, and seasonal dynamics (p < 0.05). Soil available N, available P, and moisture were significantly positively correlated with RGR_H (p < 0.05), while soil temperature (ST), total nitrogen (TN), and soil organic carbon (SOC) exhibited significant negative correlations (p < 0.05). Nutrient additions altered the hierarchy, as well as the direct and indirect factors that influence RGR_H, revealing the opposing regulatory effects of total and available nitrogen. These findings highlight the critical roles of nitrogen and phosphorus, suggesting phosphorus is a potential limiting factor for plant growth in this alpine region. This study offers a comprehensive analysis of how nitrogen and phosphorus additions affect alpine plant growth rates and clarifies the underlying mechanisms in these sensitive ecosystems. Full article

Humic acid (HA) is considered a promising soil amendment for improving soil fertility. However, the effects of HA application on the microbial community, especially in aeolian sandy soils of semi-arid regions, remain insufficiently elucidated. To address this gap, a field experiment was conducted to investigate the changes in soil properties, bacterial and fungal diversity, and community structure in a buckwheat field in the fourth year after a single application of lignite humic acid (L-HA) at 0 (L-HA0), 2 (L-HA1), 4 (L-HA2), and 6 (L-HA3) ton·ha⁻¹ in an aeolian sandy soil in Inner Mongolia, China. The results demonstrated that four years after L-HA application, there was a significant (p < 0.05) decrease in soil pH, accompanied by an increase in soil water content and nutrient levels, including organic matter and total N, available P, and K. Additionally, the application of L-HA enhanced microbial biomass C and N and stimulated enzyme activities, such as urease and invertase, with these effects being more pronounced at higher application rates (L-HA2 and L-HA3). However, HA addition did not significantly (p < 0.05) affect soil microbial biomass P or alkaline phosphatase activity. The L-HA amendment enhanced the α-diversity indices of soil bacteria but did not significantly (p < 0.05) affect soil fungal diversity. The addition of L-HA induced significant changes in the composition of the soil microbial community at both the phylum and genus levels, with significant variability in microbial responses observed across the different L-HA application rates. The incorporation of L-HA notably enriched the composition of bacterial and fungal communities at the phylum level, particularly those involved in carbon cycling, including the bacterial phyla Proteobacteria and Actinobacteriota and the fungal phyla Ascomycota and Rozellomycota. At the genus level, higher L-HA application rates, specifically L-HA2 and L-HA3, exerted statistically significant (p < 0.05) effects on most bacterial and fungal genera. Specifically, these treatments increased the abundance of bacterial genera, such as Rokubacterium and fungal genera, including Plectosphaerella, Tausonia, Talaromyces, and Clonostachys. Conversely, the relative abundance of the bacterial genera Vicinamibacter and Subgroup_7, as well as the fungal genus Niesslia, was significantly reduced. Redundancy analysis (RDA) indicated that bacterial community compositions were closely associated with soil parameters, such as available P (AP), microbial biomass carbon (SMC), microbial biomass nitrogen (SMN), microbial biomass phosphorus (SMP), and invertase, while all tested soil parameters, except for alkaline phosphatase, significantly influenced the fungal community structure. Given that the changes in these soil parameters were highly correlated with the amounts of L-HA addition, this suggests that the impacts of long-term L-HA amendment on the soil bacterial and fungal communities were linked to alterations in soil physicochemical and biological properties. Full article

The increasing global production and utilization of zirconium (Zr) compounds, including zirconium chloride (ZrCl₄) and zirconium oxide nanoparticles (NPs-ZrO₂), raises concerns about their potential environmental impact. This study investigated the toxicity mechanisms of ZrCl₄ and NPs-ZrO₂ on the aquatic plant Lemna minor. The physicochemical properties of NPs-ZrO₂ in the test medium were characterized, revealing concentration-dependent changes in the hydrodynamic diameter, zeta potential, and solubility over time. The analysis of Zr speciation showed the predominance of Zr(OH)₄(aq) species from ZrCl₄. Plants of L. minor exposed to ZrCl₄ and NPs-ZrO₂ exhibited differential Zr bioaccumulation, growth inhibition, oxidative stress, and antioxidant responses. ZrCl₄ induced a higher toxicity than NPs-ZrO₂, with bioaccumulation strongly correlating with adverse effects. The differential toxicity impact between these two Zr-compounds was also determined by the lowest observed-effect doses for growth and biochemical parameters. The scanning electron microscopy coupled with energy-dispersive X-ray spectroscopy confirmed internalization of NPs-ZrO₂ and Zr uptake in the L. minor plant. Therefore, these findings highlighted the importance of chemical speciation, environmental transformations, and biological responses in assessing the ecological impact of Zr-compounds for effective risk assessment and management strategies for protecting aquatic ecosystems. Full article

In Chile, honey is produced from several native species with interesting biological properties. Accordingly, those attributes are present in Chilean honeys owing to the presence of phenolic compounds inherited from specific floral sources. In recent years, the exported volume of Chilean honeys has been increased, reaching new markets with demanding regulations directed toward the fulfilment of consumers’ expectations. Accordingly, there are countries with special requirements referring to Paenibacillus larvae spore-free honeys. This microorganism is the pathogen responsible for American foulbrood disease in beehives; however, antibiotics are not allowed when an apiary tests positive for P. larvae. On the other hand, it is mandatory to have an accurate method to remove the potential presence of spores in bee products intended for export. Exposure to ionizing radiation can be an efficient way to achieve this goal. In this work, 54 honey samples harvested from northern, central and southern Chile were analyzed for physicochemical patterns, total phenols, antioxidant activity and antiradical activity. Honeys with and without spores were exposed to ionizing radiation at three levels of intensity. Afterwards, the presence of spores and the effect on phenol bioavailability, antiradical activity and antioxidant activity were measured again. This research presents results showing a positive correlation between the percentage of prevalence of native endemic species in the set of honeys analyzed and the capacity to resist this process, without altering their natural attributes determined before irradiation treatments. Full article

The qualities of precooked foods can be significantly changed by the microorganisms produced during room temperature storage. This work assessed the effects of different antibacterial treatments (CK, without any treatment; microwave treatment, MS; microwave treatment and biological preservatives, MSBP) on the physicochemical properties and microbial communities of precooked crayfish tails during room temperature storage. Only the combination of microwave sterilization and biological preservatives significantly inhibited spoilage, as evidenced by the total viable count (4.15 log CFU/g) after 3 days of room temperature storage, which satisfied the transit time of most logistics companies in China. Changes in pH and TVB-N were also significantly inhibited in the MSBP group compared with those in the CK and MS groups. More than 30 new volatile compounds were produced in the CK groups during room temperature storage. However, in the MSBP groups, the volatile compounds were almost unchanged. The correlations between the microbial composition and volatile compounds suggested that specific bacterial species with metabolic activities related to amino acid, energy, cofactor, and vitamin metabolism, as well as xenobiotics biodegradation and metabolism, were responsible for the changes in volatile compounds. These bacteria included Psychrobacter, Arthrobacter, Facklamia, Leucobacter, Corynebacterium, Erysipelothrix, Devosia, Dietzia, and Acidovorax. Overall, our findings provide a foundation for the development of strategies to inhibit spoilage in precooked crayfish tails stored at room temperature. Full article

The adsorption of biomolecules on nanoparticles’ surface ultimately depends on the intermolecular forces, which dictate the mutual interaction transforming their physical, chemical, and biological characteristics. Therefore, a better understanding of the adsorption of serum proteins and their impact on nanoparticle physicochemical properties is of utmost importance for developing nanoparticle-based therapies. We investigated the interactions between potentially therapeutic proteins, neurotrophin 3 (NT3), brain-derived neurotrophic factor (BDNF), and polyethylene glycol (PEG), in a cell-free system and a retinal pigmented epithelium cell line (ARPE-19). The variance in the physicochemical properties of PEGylated NT3–BDNF nanoparticles (NPs) in serum-abundant and serum-free systems was studied using transmission electron microscopy, atomic force microscopy, multi-angle dynamic, and electrophoretic light scattering. Next, we compared the cellular response of ARPE-19 cells after exposure to PEGylated NT3–BDNF NPs in either a serum-free or complex serum environment by investigating protein release and cell cytotoxicity using ultracentrifuge, fluorescence spectroscopy, and confocal microscopy. After serum exposure, the decrease in the aggregation of PEGylated NT3–BDNF NPs was accompanied by increased cell viability and BDNF/NT3 in vitro release. In contrast, in a serum-free environment, the appearance of positively charged NPs with hydrodynamic diameters up to 900 nm correlated with higher cytotoxicity and limited BDNF/NT3 release into the cell culture media. This work provides new insights into the role of protein corona when considering the PEGylated nano–bio interface with implications for cytotoxicity, NPs’ distribution, and BDNF and NT3 release profiles in the in vitro setting. Full article

Poly(ethylene terephthalate)—PET—is one of the most frequently used polymers in biomedical applications. Due to chemical inertness, PET surface modification is necessary to gain specific properties, making the polymer biocompatible. The aim of this paper is to characterize the multi-component films containing chitosan (Ch), phospholipid 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), immunosuppressant cyclosporine A (CsA) and/or antioxidant lauryl gallate (LG) which can be utilized as a very attractive material for developing the PET coatings. Chitosan was employed owing to its antibacterial activity and also its ability to promote cell adhesion and proliferation favorable for tissue engineering and regeneration purposes. Moreover, the Ch film can be additionally modified with other substances of biological importance (DOPC, CsA and LG). The layers of varying compositions were prepared using the Langmuir—Blodgett (LB) technique on the air plasma-activated PET support. Then their nanostructure, molecular distribution, surface chemistry and wettability were determined by atomic force microscopy (AFM), time-of-flight secondary ion mass spectrometry (TOF-SIMS), X-ray photoelectron spectroscopy (XPS), contact angle (CA) measurements and the surface free energy and its components’ determination, respectively. The obtained results show clearly the dependence of the surface properties of the films on the molar ratio of components and allow for a better understanding of the coating organization and mechanisms of interactions at the molecular level both inside the films and between the films and the polar/apolar liquids imitating the environment of different properties. The organized layers of this type can be helpful in gaining control over the surface properties of the biomaterial, thus getting rid of the limitations in favor of increased biocompatibility. This is a good basis for further investigations on the correlation of the immune system response to the presence of biomaterial and its physicochemical properties. Full article

Calcium phosphate cement (CPC) has been widely studied, but its lack of osteoinductivity and inadequate mechanical properties limit its application, while strontium is able to promote bone formation and inhibit bone resorption. In this study, different proportions of tristrontium silicate were introduced to create a novel strontium-modified calcium phosphate cement (SMPC). The physicochemical properties of SMPC and CPC were compared, and the microstructures of the bone cements were characterized with scanning electron microscopy assays. Then, the effect of SMPC on cell proliferation and differentiation was examined. Furthermore, local inflammatory response and osteogenesis after SMPC implantation were also confirmed in the study. Finally, a rat model of isolated vertebral defects was used to test the biomechanical properties of the cements. The results showed that SMPC has better injectability and a shorter setting time than CPC. Meanwhile, the addition of tristrontium silicate promoted the mechanical strength of calcium phosphate cement, and the compressive strength of 5% SMPC increased to 6.00 ± 0.74 MPa. However, this promotion effect gradually diminished with an increase in tristrontium silicate, which was also found in the rat model of isolated vertebral defects. Furthermore, SMPC showed a more preferential role in promoting cell proliferation and differentiation compared to CPC. Neither SMPC nor CPC showed significant inflammatory responses in vivo. Histological staining suggested that SMPCs were significantly better than CPC in promoting new bone regeneration. Importantly, this osteogenesis effect of SMPC was positively correlated with the ratio of tristrontium silicate. In conclusion, 5% SMPC is a promising substitute material for bone repair with excellent physicochemical properties and biological activity. Full article

Changes in altitude can cause regional microclimate changes, leading to the spatial heterogeneity of environmental factors and soil bacteria. However, the internal driving process and mechanism remain unclear. Here, we selected Fanjingshan, a typical nature reserve in the subtropical region of south China with a clear altitudinal belt, to reveal the response mechanisms of microbial populations with altitude changes. We examined the physiochemical and biological properties (pH and soil enzyme activities) of 0~10 cm soil layers, soil bacterial diversity, and community structure across the 2.1 km belt (consisting of six altitude ranges). Our results showed that soil pH was highest at the altitude range below 900 m and decreased with altitude thereafter. Soil enzyme activities showed an overall decreasing trend with altitude rising. The soil sucrase and catalase activity was highest (48.35 mg.g⁻¹.d⁻¹ and 23.75 µmol.g⁻¹, respectively) at altitudes below 900 m; the soil urease activity was highest (704.24 µg.g⁻¹.d⁻¹) at 900~1200 m; and the soil acid phosphatase activity was highest (57.18 µmol.g⁻¹) at 1200~1500 m. In addition, the soil bacterial community diversity showed a linear increasing trend, with the maximum abundance at 1500~1800 m. Soil pH was correlated with enzyme activity and bacterial community composition and structure, and the correlation was the strongest between pH and the distribution of bacterial diversity at altitudes below 900 m. Overall, soil enzyme activities and soil bacterial diversity showed spatial heterogeneity along the altitude gradient, and their community structure and composition were affected by altitude as a result of changes in soil physicochemical factors. This study provides a better and deeper understanding of the spatial succession of soil in the Fanjingshan area and the distribution pattern of soil microorganisms in central subtropical mountain ecosystems. Full article

Urease is an amidohydrolase enzyme that is responsible for fatal morbidities in the human body, such as catheter encrustation, encephalopathy, peptic ulcers, hepatic coma, kidney stone formation, and many others. In recent years, scientists have devoted considerable efforts to the quest for efficient urease inhibitors. In the pharmaceutical chemistry, the thiourea skeleton plays a vital role. Thus, the present work focused on the development and discovery of novel urease inhibitors and reported the synthesis of a set of 1-aroyl-3-[3-chloro-2-methylphenyl] thiourea hybrids with aliphatic and aromatic side chains 4a–j. The compounds were characterized by different analytical techniques including FT-IR, ¹H-NMR, and ¹³C-NMR, and were evaluated for in-vitro enzyme inhibitory activity against jack bean urease (JBU), where they were found to be potent anti-urease inhibitors and the inhibitory activity IC₅₀ was found in the range of 0.0019 ± 0.0011 to 0.0532 ± 0.9951 μM as compared to the standard thiourea (IC₅₀ = 4.7455 ± 0.0545 μM). Other studies included density functional theory (DFT), antioxidant radical scavenging assay, physicochemical properties (ADMET properties), molecular docking and molecular dynamics simulations. All compounds were found to be more active than the standard, with compound 4i exhibiting the greatest JBU enzyme inhibition (IC₅₀ value of 0.0019 ± 0.0011 µM). The kinetics of enzyme inhibition revealed that compound 4i exhibited non-competitive inhibition with a Ki value of 0.0003 µM. The correlation between DFT experiments with a modest HOMO-LUMO energy gap and biological data was optimal. These recently identified urease enzyme inhibitors may serve as a starting point for future research and development. Full article

In this work, biomass lignocellulosic materials extracted via chemical and physical treatments from bean and pistachio pod waste were used for the optimized elimination of Indigo Carmine (IC) from aqueous medium, using a design of experiments methodology. The physicochemical properties of the studied materials (raw and treated counterparts) used for the sorption of IC were investigated by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), scanning electron microscopy (SEM) coupled with EDX, and thermal analysis. Key variables influencing the adsorption of IC, namely the initial IC concentration, the pH of the solution, the stirring time and the mass of adsorbents, were optimized by the central composite design (CCD) with three center points, the measured response being the amount of IC adsorbed. The optimal conditions obtained from the statistical analysis for the removal of IC were as follows: maximum adsorbed amounts of IC: 1.81 mg/g, 2.05 mg/g, 3.56 mg/g; 7.42 mg/g, 8.95 mg/g, 15.35 mg/g, for raw bean pods (RBS), BST1 and BST2 (bean pods chemically treated), and for raw pistachio pods (RPS), PST1 and PST2 (pistachio pods chemically treated), respectively. The pseudo-second-order nonlinear kinetics model well described the IC adsorption kinetics for RBS, BST1 and BST2, while the Elovich model was properly fitted by RPS, PST1, and PST2 biomaterials data. The Freundlich isotherm best described the shrinkage of IC on different sorbents. The good correlation of the experimental data of the IC with respect to the Freundlich isotherm indicated a multilayer adsorption with heterogeneous adsorption sites and different energies. The interest of this work consisted in developing analytical methods for the treatment of water polluted by dyes by using biosorbents, local biological materials widely available and inexpensive. The results collected in this work highlighted the interesting structural, morphological, and physico-chemical properties of the agro-waste used in the study, which properties allowed an important fixation of the target dye in solution. The research showed that the agro-waste used in the study are possible precursors to locally manufacture adsorbents at low cost, thus allowing the efficient removal of waste and dyes in liquid effluents. Full article

Persistent inflammation contributes to a number of diseases; therefore, control of the inflammatory response is an important therapeutic goal. In an effort to identify novel anti-inflammatory compounds, we screened a library of pyridazinones and structurally related derivatives that were used previously to identify N-formyl peptide receptor (FPR) agonists. Screening of the compounds for their ability to inhibit lipopolysaccharide (LPS)-induced nuclear factor κB (NF-κB) transcriptional activity in human THP1-Blue monocytic cells identified 48 compounds with anti-inflammatory activity. Interestingly, 34 compounds were FPR agonists, whereas 14 inhibitors of LPS-induced NF-κB activity were not FPR agonists, indicating that they inhibited different signaling pathways. Further analysis of the most potent inhibitors showed that they also inhibited LPS-induced production of interleukin 6 (IL-6) by human MonoMac-6 monocytic cells, again verifying their anti-inflammatory properties. Structure–activity relationship (SAR) classification models based on atom pair descriptors and physicochemical ADME parameters were developed to achieve better insight into the relationships between chemical structures of the compounds and their biological activities, and we found that there was little correlation between FPR agonist activity and inhibition of LPS-induced NF-κB activity. Indeed, Cmpd43, a well-known pyrazolone-based FPR agonist, as well as FPR1 and FPR2 peptide agonists had no effect on the LPS-induced NF-κB activity in THP1-Blue cells. Thus, some FPR agonists reported to have anti-inflammatory activity may actually mediate their effects through FPR-independent pathways, as it is suggested by our results with this series of compounds. This could explain how treatment with some agonists known to be inflammatory (i.e., FPR1 agonists) could result in anti-inflammatory effects. Further research is clearly needed to define the molecular targets of pyridazinones and structurally related compounds with anti-inflammatory activity and to define their relationships (if any) to FPR signaling events. Full article

Hyaluronic acid (HA) injectable biomaterials are currently applied in numerous biomedical areas, beyond their use as dermal fillers. However, bacterial infections and painful inflammations are associated with healthcare complications that can appear after injection, restricting their applicability. Fortunately, HA injectable hydrogels can also serve as drug delivery platforms for the controlled release of bioactive agents with a critical role in the control of certain diseases. Accordingly, herein, HA hydrogels were crosslinked with 1 4-butanediol diglycidyl ether (BDDE) loaded with cefuroxime (CFX), tetracycline (TCN), and amoxicillin (AMX) antibiotics and acetylsalicylic acid (ASA) anti-inflammatory agent in order to promote antibacterial and anti-inflammatory responses. The hydrogels were thoroughly characterized and a clear correlation between the crosslinking grade and the hydrogels’ physicochemical properties was found after rheology, scanning electron microscopy (SEM), thermogravimetry (TGA), and differential scanning calorimetry (DSC) analyses. The biological safety of the hydrogels, expected due to the lack of BDDE residues observed in ¹H-NMR spectroscopy, was also corroborated by an exhaustive biocompatibility test. As expected, the in vitro antibacterial and anti-inflammatory activity of the drug-loaded HA-BDDE hydrogels was confirmed against Staphylococcus aureus by significantly decreasing the pro-inflammatory cytokine levels. Full article

It has been revealed that numerous nanoparticles are formed during the boiling preparation of traditional Chinese medical decoctions and culinary soups. They may possess physiological effects different from those of constituent components and are worth paying attention to but are barely noticed and investigated as of yet. In this study, six groups of nanoparticles, whose size ranged from 57 to 300 nm, were successfully isolated from the decoction of Isatis indigotica Fort. root, according to their particle size by the means of size-exclusive chromatography. All of the obtained nanoparticles have a high content of polysaccharides, which distinguishes them from the disclosed BLG protein nanoparticles. They also have high similarities in other compositions, surface charge, and stimuli responses. However, four out of these six nanoparticles (F2, F3, F4, and F5) exhibited significant antiviral activity against influenza virus H1N1, and their antiviral activities and cytotoxicity towards MDCK cells varied with their sizes. It suggested that the antiviral efficacy of BLG decoction could also be from its nanoparticles besides its well-known antiviral phytochemicals. It also implied that the biological effects of these polysaccharide nanoparticles, including cytotoxicity and antiviral activity, may be correlative with the physicochemical properties, especially the particle size. Full article