Search Results (31)

The Chiapas Highlands of Mexico represent a critical center of herpetofaunal diversity and endemism within Mesoamerica. This study provides the first comprehensive inventory of amphibians and reptiles in the Mexican part of this biogeographic province, documenting 354 species, 112 amphibians, and 242 reptiles. Amphibian richness is highest in the families Hylidae, Plethodontidae, and Craugastoridae, whereas reptile richness is highest in the families Dipsadidae and Colubridae. Ninety-eight species are endemic to the Chiapas Highlands, with forty restricted to its Mexican portion. The herpetofauna of the Chiapas Highlands shows a high level of endemism. A higher proportion of reptile species are shared with neighboring provinces than amphibians. Conservation assessments reveal that 64 species are listed as Vulnerable, Endangered, or Critically Endangered on the International Union for Conservation of Nature’s (IUCN) Red List, 39 species are classified as Threatened (A) or Endangered (P) under Mexican environmental legislation, and 98 species are considered high-risk according to the Environmental Vulnerability Score (EVS), with habitat loss and chytrid fungi identified as principal threats. Our summary and synthesis of its amphibian and reptile species highlights the Chiapas Highlands as a biogeographic and ecological hotspot deserving urgent conservation attention. Full article

Amphibians are particularly vulnerable to hydric stress due to their permeable skin, biphasic life cycle, and strong dependence on aquatic and moist terrestrial environments. In the Northwestern Mediterranean Basin—one of Europe’s most climate-sensitive regions—the intensification of droughts associated with climate change poses a critical threat to amphibian populations. Increased aridification, either due to higher temperatures or to more frequent, prolonged, and severe drought episodes, can affect both aquatic and terrestrial life stages, directly altering breeding opportunities, larval development, post-metamorphic survival, and dispersal capacity. This review aims to gather and synthesize current knowledge on the ecological, physiological, and demographic impacts of drought on amphibians of the Northwestern Mediterranean across habitat types, including ephemeral ponds, permanent water bodies, lotic systems, and terrestrial landscapes, including a final section on possible mitigation actions. Drought-induced shifts in hydroperiod can drastically reduce reproductive success and accelerate larval development with fitness consequences while, on land, desiccation risk and habitat degradation could limit access to refugia and fragment populations by reducing structural connectivity. These environmental constraints are compounded by the interactions between drought and emerging infectious diseases. We discuss the current knowledge on how chytrid fungi (Batrachochytrium dendrobatidis and B. salamandrivorans) and ranaviruses may respond to temperature and moisture regimes, and how drought may affect their transmission dynamics, host susceptibility, and pathogen persistence. In these cases, microbiome disruption, pollutant concentration, and increased contact rates between species may amplify disease outbreaks under dry conditions, but a better understanding of the multifactorial effects of drought on amphibian biology and disease ecology is needed for predicting species vulnerability, identifying high-risk populations, and guiding future conservation and management strategies in Mediterranean environments. Full article

Emerging infectious diseases such as chytridiomycosis and ranavirosis, caused by Batrachochytrium dendrobatidis (Bd) and ranavirus (RV), respectively, are major contributors to global amphibian declines. Despite their significance, comprehensive data on the spatial epidemiology of these pathogens in South Korea remain limited. This study aimed to assess the nationwide co-occurrence and prevalence of Bd and RV across four anuran species in five administrative regions. Infection rates were analyzed in relation to host species, sex, and life history stage. Results indicated distinct prevalence patterns driven by ecological traits. Bd was predominantly detected in mountainous and coastal habitats, whereas RV was more common in flat inland areas. Both pathogens exhibited peak occurrence in central regions, likely reflecting seasonal transmission dynamics rather than stable endemic hotspots. The observed spatial heterogeneity appears to be influenced by pathogen-specific thermal tolerance and host ecology. These findings underscore the importance of understanding host–pathogen–environment interactions for effective disease surveillance and management. Continuous monitoring and integrative ecological approaches are essential to mitigate pathogen-induced biodiversity loss and to inform amphibian conservation strategies in East Asia. Full article

The chytrid fungus, Batrachochytrium dendrobatidis (Bd), infects amphibian skin, causing chytridiomycosis, which is a contributing cause of worldwide declines and extinctions of amphibians. Relatively little is known about the roles of amphibian skin-resident immune cells, such as macrophages, in these antifungal defenses. Across vertebrates, macrophage differentiation is controlled through the activation of colony-stimulating factor-1 (CSF1) receptor by CSF1 and interleukin-34 (IL34) cytokines. While the precise roles of these respective cytokines in macrophage development remain to be fully explored, our ongoing studies indicate that frog (Xenopus laevis) macrophages differentiated by recombinant forms of CSF1 and IL34 are functionally distinct. Accordingly, we explored the roles of X. laevis CSF1- and IL34-macrophages in anti-Bd defenses. Enriching cutaneous IL34-macrophages, but not CSF1-macrophages, resulted in significant anti-Bd protection. In vitro analysis of frog macrophage-Bd interactions indicated that both macrophage subsets phagocytosed Bd. However, IL34-macrophages cocultured with Bd exhibited greater pro-inflammatory gene expression, whereas CSF1-macrophages cocultured with Bd showed greater immunosuppressive gene expression profiles. Concurrently, Bd-cocultured with CSF1-macrophages, but not IL34-macrophages, possessed elevated expression of genes associated with immune evasion. This work marks a step forward in our understanding of the roles of frog macrophage subsets in antifungal defenses. Full article

The chytrid fungus Batrachochytrium salamandrivorans (Bsal) poses a significant threat to amphibian biodiversity, driving severe declines in salamander populations in Europe. While understanding the host–pathogen interaction may yield novel avenues for disease mitigation, effective in vitro models are currently lacking. We here develop a cell-culture-based model using A6 cells to reproduce the complete life cycle of Bsal in vitro, encompassing key stages such as β-galactose-associated cell attachment, active host cell penetration, intracellular maturation, host cell death, and Bsal release. Using imaging techniques, we provide evidence that Bsal penetrates A6 cells through a mechanism independent of conventional host actin dynamics. Our comparative analysis reveals that Bsal infection closely mirrors responses observed in native salamander skin tissues, validating the A6 cell line as an effective surrogate for in vivo studies. This research enhances our understanding of Bsal’s pathogenicity and emphasizes the potential of the A6 cell model for future studies. Full article

The amphibian chytrid fungus, Batrachochytrium dendrobatidis (Bd), has been implicated as an agent of acute declines in amphibian populations worldwide. East Asian amphibians have been coexisting with Bd for long periods and thus are considered resistant; among the many is the Japanese tree frog, Dryophytes japonicus. Our study focused Bd infection effects on reproductive behaviors and physiological parameters in D. japonicus as a function of better understanding the chronic effect of the disease on long-term population viability. During the peak breeding season, we captured 70 males and quantified the chorus size, calling behaviors, physiological states, innate immunity, and sperm quality of individuals. In a simple comparison, all parameters were not significantly different. However, in the NMDS analysis, we were able to confirm subtle trends in some items according to infection and correlations between several items. Importantly, sperm density and sperm vitality tend to increase with Bd infection load, suggesting increased reproductive effort following infection. Additionally, this analysis indicated that innate immunity was positively related to Bd infection intensities, indicating the activation of immunity upon infection. These findings indicate that Bd-resistant D. japonicus maintains reproductive capabilities and physio-logical stability despite Bd infection, likely due to a co-evolved immune system. The present work offers insight into how amphibian populations may have some endurance in the presence of Bd and points out the importance of studying resistant species as a means to understand long-term ecological effects. Our results suggest that resistance to Bd may not simply prevent cata-strophic declines but actively contribute to the dynamics of Bd prevalence in amphibian communities, and confer implications for conservation strategies. Full article

Chytridiomycosis is one of the greatest threats to the diversity of amphibians worldwide. Caused by the chytrid fungus Batrachochytrium salamandrivorans (Bsal), it plays a decisive role in species declines. Bsal is particularly harmful to the European fire salamander (Salamandra salamandra), causing ulcerations, anorexia and ataxia, which ultimately lead to death. While most studies have focused on the geographic expansion of the pathogen, there is little high-resolution information available. Therefore, we chose a three-step approach in this study: We (I) used a mechanistic distribution model to project the microclimatic growth rate of Bsal within its invasive range on a spatially very high resolution (25 m). We (II) used a correlative distribution model to predict the potential distribution of S. salamandra and (III) applied n-dimensional hypervolumes to quantify the realized microclimatic niches of both species and examine their overlaps. We estimated future trends based on comparisons among three climate scenarios, the current microclimatic conditions and a +2 °C and +4 °C global mean temperature scenario. We demonstrated that Bsal finds suitable growth conditions everywhere within our study area, thus putting S. salamandra at high risk. However, climate change could lead to less suitable thermal conditions for Bsal, possibly providing a loophole for S. salamandra. Full article

The return of agricultural waste to the field is one of the most effective strategies of increasing crop yield, improving the soil’s physicochemical properties, and improving the soil rhizosphere environment. In the present study, sheep manure (SM), cow manure (CM), tail vegetable (TV), mushroom residue (MR), and corn straw (CS) were used as raw materials, and no fertilization (CK1) and local commercial organic fertilizer (CK2) treatments were used as controls. Eight composts were set up using specific mass ratios of different compost materials. After fermentation, field experiments were conducted to determine the cabbage yield, soil’s physicochemical properties, and soil rhizosphere conditions. The eight composts increased the soil organic matter and nutrient contents significantly. Among the eight fermentation formulas, T6 (CM:CS:TV:SM = 1:1:2:6), T7 (MR:CS:TV:SM = 1:1:2:6), and T8 (CM:MR:CS:TV:SM = 1:1:1:2:5) were relatively effective. Therefore, high-throughput sequencing was performed on T6, T7, T8, CK1, and CK2. T6, T7, and T8 exhibited increased relative abundance of Proteobacteria, Actinomycetes, and Firmicutes, while the Acidobacteria abundance was decreased. In addition, Ascomycota’s and Basidiomycetes’ relative abundance decreased, and the oil chytrid and mortierella increased. The microbial community structure was affected significantly by pH, electrical conductivity, available potassium, available nitrogen, and organic matter. In general, the three composts increased yield by improving the soil’s physicochemical properties, fertility, and microbial community structure. Among them, T6 had the most significant effect and is the optimal formula for use as a local organic cabbage fertilizer, and it could facilitate sustainable agricultural development. Full article

Increasing reports suggest the occurrence of co-infection between Ranaviruses such as Frog Virus 3 (FV3) and the chytrid fungus Batrachochytrium dendrobatidis (Bd) in various amphibian species. However, the potential direct interaction of these two pathogens has not been examined to date. In this study, we investigated whether FV3 can interact with Bd in vitro using qPCR, conventional microscopy, and immunofluorescent microscopy. Our results reveal the unexpected ability of FV3 to bind, promote aggregation, productively infect, and significantly increase Bd growth in vitro. To extend these results in vivo, we assessed the impact of FV3 on Xenopus tropicalis frogs previously infected with Bd. Consistent with in vitro results, FV3 exposure to previously Bd-infected X. tropicalis significantly increased Bd loads and decreased the host’s survival. Full article

Endangered animals suffer from isolation of their habitats. Isolation leads to a reduction in population size as well as a decrease in genetic diversity and a concomitant increase in the risk of extinction. Amphibians are the most endangered vertebrate class. Besides habitat loss, fragmentation and isolation, amphibians are threatened by emerging diseases e.g., chytrid fungus or Ranavirus. By employing experiments, researchers investigate whether changes in genetic diversity within or among isolated populations affect amphibian fitness. While genetic diversity estimates are based on molecular markers, typically microsatellites, fitness is mostly measured as tadpole performance in rearing experiments often under varying environmental conditions. Tadpole performances (e.g., body mass, growth rate and survival) have been found to be negatively affected by low genetic diversity, as several studies have found a positive association between genetic diversity and these fitness traits. Moreover, infection with pathogens also seems to be more likely in individuals or populations with lower genetic diversity. Overall, these genetic–fitness correlations seem to be more pronounced or detectable in smaller, declining populations but not in larger populations. Genomic studies, which sample a larger fraction of the genome, are still scarce in the conservation genetic literature on amphibians. These are likely to increase in upcoming years and may reveal adaptive variants that protect against dangerous pathogens or environmental changes. Altogether, genetic–fitness correlation studies should be a priority in order to develop effective management plans for the genetic rescue of isolated, imperilled amphibian populations. Full article

The chytrid fungal pathogens Batrachochytrium salamandrivorans (Bsal) and B. dendrobatidis (Bd) are driving amphibian extinctions and population declines worldwide. As their origins are believed to be in East/Southeast Asia, this region is crucial for understanding their ecology. However, Bsal screening is relatively limited in this region, particularly in hotspots where Bd lineage diversity is high. To address this gap, we conducted an extensive Bsal screening involving 1101 individuals from 36 amphibian species, spanning 17 natural locations and four captive facilities in the biodiversity-rich Guangxi Zhuang Autonomous Region (GAR). Our PCR assays yielded unexpected results, revealing the complete absence of Bsal in all tested samples including 51 individuals with Bd presence. To understand the potential distribution of Bsal, we created niche models, utilizing existing occurrence records from both Asia and Europe. These models estimated potential suitable habitats for Bsal largely in the northern and southwestern parts of the GAR. Although Bsal was absent in our samples, the niche models identified 10 study sites as being potentially suitable for this pathogen. Interestingly, out of these 10 sites, Bd was detected at 8. This suggests that Bsal and Bd could possibly co-exist in these habitats, if Bsal were present. Several factors seem to influence the distribution of Bsal in Asia, including variations in temperature, local caudate species diversity, elevation, and human population density. However, it is climate-related factors that hold the greatest significance, accounting for a notable 60% contribution. The models propose that the specific climatic conditions of arid regions, primarily seen in the GAR, play a major role in the distribution of Bsal. Considering the increased pathogenicity of Bsal at stable and cooler temperatures (10–15 °C), species-dependent variations, and the potential for seasonal Bd-Bsal interactions, we emphasize the importance of periodic monitoring for Bsal within its projected range in the GAR. Our study provides deeper insights into Bsal’s ecological niche and the knowledge generated will facilitate conservation efforts in amphibian populations devastated by chytrid pathogens across other regions of the world. Full article

The unicellular, parasitic fungi of the phylum Sanchytriomycota (sanchytrids) were discovered a few years ago. These unusual chytrid-like fungi parasitize algae. The zoospores of the species of the phylum contain an extremely long kinetosome composed of microtubular singlets or doublets and a non-motile pseudocilium (i.e., a reduced posterior flagellum). Fungi provide an ideal opportunity to test and confirm the correlation between the occurrence of flagellar proteins (the ciliome) and that of the eukaryotic cilium/flagellum since the flagellum occurs in the early-branching phyla and not in terrestrial fungi. Tubulin polymerization promoting protein (TPPP)-like proteins, which contain a p25alpha domain, were also suggested to belong to the ciliome and are present in flagellated fungi. Although sanchytrids have lost many of the flagellar proteins, here it is shown that they possess a DNA sequence possibly encoding long (animal-type) TPPP, but not the fungal-type one characteristic of chytrid fungi. Phylogenetic analysis of p25alpha domains placed sanchytrids into a sister position to Blastocladiomycota, similarly to species phylogeny, with maximal support. Full article

The chytrid fungus Batrachochytrium dendrobatidis (Bd) is a major threat to amphibians, yet there are no reports of major disease impacts in East Asian frogs. Genetic variation of the major histocompatibility complex (MHC) has been associated with resistance to Bd in frogs from East Asia and worldwide. Using transcriptomic data collated from 11 Japanese frog species (one individual per species), we isolated MHC class I and IIb sequences and validated using molecular cloning. We then compared MHC from Japanese frogs and other species worldwide, with varying Bd susceptibility. Supertyping analysis, which groups MHC alleles based on physicochemical properties of peptide binding sites, identified that all examined East Asian frogs contained at least one MHC-IIb allele belonging to supertype ST-1. This indicates that, despite the large divergence times between some Japanese frogs (up to 145 million years), particular functional properties in the peptide binding sites of MHC-II are conserved among East Asian frogs. Furthermore, preliminary analysis using NetMHCIIpan-4.0, which predicts potential Bd-peptide binding ability, suggests that MHC-IIb ST-1 and ST-2 have higher overall peptide binding ability than other supertypes, irrespective of whether the peptides are derived from Bd, other fungi, or bacteria. Our findings suggest that MHC-IIb among East Asian frogs may have co-evolved under the same selective pressure. Given that Bd originated in this region, it may be a major driver of MHC evolution in East Asian frogs. Full article

Amphibians are the most threatened group of vertebrates. While habitat loss poses the greatest threat to amphibians, a spreading fungal disease caused by Batrachochytrium dendrobatidis Longcore, Pessier & D.K. Nichols 1999 (Bd) is seriously affecting an increasing number of species. Although Bd is widely prevalent, there are identifiable heterogeneities in the pathogen’s distribution that are linked to environmental parameters. Our objective was to identify conditions that affect the geographic distribution of this pathogen using species distribution models (SDMs) with a special focus on Eastern Europe. SDMs can help identify hotspots for future outbreaks of Bd but perhaps more importantly identify locations that may be environmental refuges (“coldspots”) from infection. In general, climate is considered a major factor driving amphibian disease dynamics, but temperature in particular has received increased attention. Here, 42 environmental raster layers containing data on climate, soil, and human impact were used. The mean annual temperature range (or ‘continentality’) was found to have the strongest constraint on the geographic distribution of this pathogen. The modeling allowed to distinguish presumable locations that may be environmental refuges from infection and set up a framework to guide future search (sampling) of chytridiomycosis in Eastern Europe. Full article