Search Results (294)

Removing mercury (Hg²⁺) from aqueous environments remains a major environmental challenge due to its high toxicity and bioaccumulation. Graphene quantum dots (GQDs) are adsorbents that show promise in removing these contaminants, but their yield is low in their pristine form. This study investigates the effect of phosphorus (P) doping on vacancy-containing GQDs to enhance Hg²⁺ absorption using density functional theory (DFT) calculations. These were performed at the M06-2X/def2-TZVP level of theory to optimize the structures of GQDs, 1P-GQDs, and 2P-GQDs to evaluate adsorption energies, frontier molecular orbitals, and dipole moments. The results show that GQDs with vacancy have an adsorption energy of −65.21 kcal mol⁻¹, which increases to −104.54 kcal mol⁻¹ for 1P-GQDs, indicating the strongest Hg²⁺ binding. However, 2P-GQD shows a lower value of −73.47 kcal mol⁻¹, suggesting lower efficiency due to electronic competition between dopants. Dipole moments increase from 0.8192 D (GQD) to 4.6729 D (1P-GQD) and 5.7557 D (2P-GQD), confirming strong polarization induced by P incorporation. The HOMO-LUMO gap decreases from 2.204 eV to 1.937 eV after single doping. At the same time, after Hg²⁺ adsorption, the values increase to 5.153 eV (GQD), 3.462 eV (1P-GQD), and 2.068 eV (2P-GQD), indicating configuration-dependent electronic stabilization. PDOS analysis confirms weak cation-π interaction in GQD and strong orbital hybridization in 1P-GQD, consistent with a coordination-type bond. Doping a single phosphate atom optimizes the electronic structure of GQDs with a vacancy site, thereby improving charge transfer and adsorption strength through electronic balance. Full article

Background: Ferrocene-containing compounds have gained attention in medicinal chemistry due to their unique redox and structural properties. This study investigates ferrocene-based analogues of imatinib and nilotinib to define their binding determinants within the ABL1 kinase domain using an integrated in silico approach, in relation to their previously reported cytotoxic activity. Methods: Ligand geometries were optimized at the B3LYP/def2-TZVP level with D3(BJ) dispersion and SMD solvation. Molecular docking against ABL1 (PDB ID: 2HYY) was performed using Glide SP, validated by re-docking and enrichment screening. Docked poses were refined using MM-GBSA (Prime, VSGB 2.1/OPLS4). The most active compounds (9 and 15a), together with the inactive control 15e, were subjected to three independent 500 ns molecular dynamics simulations (Desmond, OPLS4), followed by trajectory analysis including RMSD, RMSF, radius of gyration, SASA, and polar surface area. Results: Compounds 9 and 15a maintained stable binding within the ATP-binding pocket despite lacking the canonical hinge interaction with Met318, indicating hinge-independent binding. Their binding was mainly driven by interactions with Asp381 (DFG motif) and cation–π contacts with Lys271. In contrast, the compound 15e showed unstable binding, increased conformational flexibility, reduced pocket burial, and loss of key stabilizing interactions. Active compounds also preserved stable P-loop dynamics, with Tyr253 engagement suggesting a role in loop stabilization. Compound 9 exhibited the most constrained and reproducible binding mode among all analogues. Conclusions: Ferrocene-based analogues can sustain stable ABL1 binding via non-classical interaction networks independent of hinge recognition. The clear distinction between active compounds and the inactive analogue 15e supports the robustness of the proposed binding mode and provides a structural basis for their reported cytotoxic activity. These findings support further experimental evaluation of ferrocene-containing scaffolds as potential BCR-ABL1 inhibitors. Full article

Cationic antimicrobial peptides (AMPs) that can target multidrug-resistant pathogenic bacteria via multiple mechanisms are considered promising alternatives to antibiotics. Small (~9 kDa) highly acidic acyl carrier proteins (ACPs), which are a well-known cofactor protein in bacterial fatty acid synthesis (FAS), are a potential intracellular target for AMPs. A previous study has demonstrated that the human AMP LL-37 can bind to ACP and thereby affect FAS and the bacterial membrane integrity. In this work, we have investigated the interactions of different classes of AMPs and antibiofilm peptides (ABPs) with the ACPs of two pathogens. We first studied the folding characteristics of the two ACPs and found that Pseudomonas aeruginosa ACP (PaACP) is fully folded at neutral pH in the absence of divalent cations. On the other hand, the homologous Francisella novicida ACP (FnACP) is unfolded at low ionic strength, but it adopts a fully folded conformation after the addition of divalent cations such as Ca²⁺ or Mg²⁺. These distinct characteristics were shown to be related to a unique His residue that is involved in a stabilizing cation–π interaction. Subsequent biophysical SPR and NMR interaction studies reveal that cationic AMPs and ABPs such as LL-37, melittin, tritrpticin, indolicidin, puroindoline A, lactoferricin B and IDR-1018, but not F5W-magainin 2, can bind to both apo- and holo-ACPs. Binding of Arg-rich peptides is preferred over their Lys-rich analogs. Interestingly, all the peptides bind to holo-ACP with higher affinity than to apo-ACP, which lacks the functionally important phosphopantothenate group. NMR peak intensity perturbation data reveal that helix II of ACP, which is known to be directly involved in complex formation with bacterial FAS enzymes, acts as a common and main recognition site for the peptides. We propose that binding of AMPs and ABPs to this region of bacterial ACPs can directly block fatty acid synthesis and interfere in other ACP-dependent biosynthetic and regulatory events, which in turn could contribute to killing the bacteria and could also intervene in biofilm formation. Full article

This study presents the synthesis and use of a novel bamboo-derived magnetic activated carbon (BMAC) for the effective removal of cationic and anionic dyes, specifically methylene blue (MB), methyl orange (MO), and sunset yellow (SY), from aqueous solutions. The adsorbent was synthesized using thermal carbonization and subsequent inclusion of magnetic oxide, yielding a porous structure with improved adsorption and magnetic separation properties. Thorough characterization utilizing SEM, EDX, BET, FTIR, XRD, and TGA/DTA validated the creation of a highly porous material including uniformly dispersed magnetic particles and several surface functional groups. Batch adsorption tests were performed to examine the influences of contact time, adsorbent dosage, initial dye concentration, pH, and temperature. The findings indicated rapid adsorption kinetics, with equilibrium reached in around 60–70 min, and adsorption capacity ranked as MB > MO > SY. Augmenting adsorbent dosage enhanced removal efficiency but diminished adsorption capacity per unit mass due to site unsaturation. The maximum adsorption capacities (q_m) of BMAC were 58.9, 56.3, and 32.7 mg/g for MB, MO, and SY, respectively, as determined from the Langmuir isotherm model, indicating superior performance compared with other reported magnetic activated carbon. The adsorption process was determined to be exothermic and spontaneous, as evidenced by thermodynamic characteristics. The equilibrium data were optimally characterized by the Langmuir isotherm model, indicating monolayer adsorption, whereas the kinetic studies conformed to the pseudo-second-order model, signifying that chemisorption is predominant. The adsorption mechanism encompasses electrostatic interactions, π–π stacking, hydrogen bonding, van der Waals forces, pore filling, and surface complexation with magnetic oxides. The findings indicate that BMAC is an efficient, sustainable, and magnetically recoverable adsorbent for the elimination of both cationic and anionic dyes from wastewater. Full article

Ionic thermoelectric (i-TE) materials have attracted increasing attention for low-grade heat harvesting owing to their high thermovoltage output under small temperature gradients. However, the development of n-type i-TE materials remains challenging. Electrode-enabled polarity regulation provides a promising alternative to material-design strategies for developing n-type i-TE devices. In this work, a poly(vinyl alcohol) (PVA)-based ionic hydrogel was prepared with dimethyl sulfoxide (DMSO) and potassium chloride (KCl) through a freeze–thaw process, and its thermoelectric behavior was regulated by electrodes. While the i-TE hydrogel device with typical Cu electrodes exhibited p-type behavior, replacing the electrodes with graphite paper (GP) electrodes converted the device response from p-type to n-type. Morphological and spectroscopic analyses suggest that the GP surface selectively adsorbed K⁺ ions through cation–π interactions, suppressing cation thermodiffusion and enabling Cl⁻-dominated ion migration under a temperature gradient. As a result, the PVA-GP device achieved a maximum S_i of −4.36 ± 0.26 mV K⁻¹. In addition, the device exhibited favorable thermoelectric output, with a maximum PF_i of 57.668 μW m⁻¹ K⁻², a room-temperature ZT of 0.0864, and a peak transient power density of 2.33 mW m⁻² during short-time discharge. Owing to the large interfacial area of the GP electrodes, the device could also function as an ionic thermoelectric supercapacitor with appreciable energy-storage capability. This work demonstrates an effective electrode-engineering strategy for constructing n-type i-TE devices and provides a feasible route for simultaneous low-grade heat harvesting and transient energy storage. Full article

In recent years, soil contamination by heavy metals and organic pollutants has become a serious environmental problem. Biochar is a highly carbonaceous, water-insoluble porous material made from biomass feedstock through a thermochemical conversion process, and it has been widely used in the remediation of various soil pollutants. However, previous reviews on the modification of biochar and the remediation reaction mechanism of heavy metals and organic pollutants by biochar in soil were still not sufficiently comprehensive. Based on the current research status of the remediation of heavy metals and organic pollutants by biochar in soil, this review systematically summarized biomass feedstock types, pyrolysis methods and their applicable scenarios, as well as the modification strategies of biochar, including pore structure modification, surface functional group modification, surface charge modification, and magnetic modification. It also comparatively discussed the adsorption of heavy metals by biochar mainly through electrostatic attraction, ion exchange, complexation/precipitation, cation−π interaction, and redox transformation, while the adsorption of organic pollutants via π−π/EDA interactions, electrostatic attraction, hydrogen bonding, hydrophobic partitioning, and pore filling were outlined. The review also discussed competitive effects among pollutants during biochar adsorption under co-contamination scenarios, as well as the synergistic interactions between biochar and soil microorganisms or plants. In addition, the review addressed recent progress in field-scale applications of biochar, as well as the current state of research on aging effects, ecological risks, and economic feasibility. Finally, it identifies key research directions that warrant further attention. This review highlighted the mechanistic differences between heavy metal stabilization and organic pollutant removal in soil by biochar, and provided mechanistic insight and guidance for biochar-based soil remediation. Full article

To promote green chemistry and improve the utilization of plant resources, flavonoids from Dalbergia pinnata (Lour.) Prain were extracted in this study by combining NADES (natural deep eutectic solvents) with UAE (ultrasound-assisted extraction). Among the 13 synthesized NADES, choline chloride (ChCl)–urea (NADES-13) exhibited the highest extraction rate, outperforming traditional organic solvents. The optimal conditions determined by response surface methodology (RSM) were as follows: ChCl–urea molar ratio of 1:3, moisture content of 60%, liquid-to-material ratio of 28.5 mL/g, ultrasonic extraction time of 49 min, and temperature of 62 °C. Under these conditions, the extraction rate reached 117.95 ± 5.97 mg/g, a 73.5% improvement compared with 80% EtOH extraction. The comparison of the two algorithms showed that RSM (R = 0.9981, RMSE = 0.6570) had better fitting accuracy and prediction stability under small sample conditions than MLP (R = 0.9427, RMSE = 5.261) and RF (R = 0.9431, RMSE = 5.2442). DFT (density functional theory) analysis demonstrated that hydrogen bonds, Van der Waals forces, and cation–π interactions mediate the interaction between NADES-13 and flavonoids. Ultrasonic cavitation-induced cell wall damage and the hydrogen-bond network of NADES-13 were confirmed separately by SEM (scanning electron microscopy) and FTIR (Fourier transform infrared spectroscopy). In vitro experiments showed that the extract possessed concentration-dependent antioxidant activity and strong antibacterial activity, with an inhibition rate of 96.87 ± 5.09% against Escherichia coli at a concentration of 0.04 mg/mL. In this study, a “Smart Optimization–Molecular Mechanism–Activity Verification” green extraction system was developed, which offers an efficient and environmentally friendly strategy for extracting plant bioactive components and contributes to the progress of green chemistry. Full article

Selective inhibition of poly(ADP-ribose) polymerase 1 (PARP1) may reduce the hematologic toxicity associated with dual PARP1/PARP2 inhibition. We performed molecular dynamics simulations for five selective inhibitors in complexes with PARP1 and PARP2, using three independent 50 ns runs per complex after docking and equilibration, followed by protein–ligand interaction fingerprint and statistical analyses. All complexes remained dynamically stable, with ligand root-mean-square deviation values generally within 0.3 nm. Comparative analysis identified three αF-helix residue pairs with nominally reduced interaction frequencies in PARP2: Asn767/Ala336, Leu769/Gly338, and Asp770/Asp339 (p < 0.05). After Benjamini–Hochberg correction for multiple comparisons, Leu769/Gly338 remained significant (q < 0.05), indicating that this pair represents the most statistically robust interaction difference within this region. Using palacaparib as the most selective inhibitor, these differences were associated with weakened or lost hydrophobic, van der Waals, and cation–π interactions in PARP2. Selective binding of modern PARP1 inhibitors appears to be associated with αF-helix-dependent interaction patterns, providing a mechanistic basis for the rational design of next-generation selective inhibitors with improved selectivity and potentially reduced toxicity. Full article

A novel series of hybrid tetrahydro-β-carboline (THβC)-imidazolium (IM) salts incorporating a fused diketopiperazine scaffold was designed, synthesized, and evaluated as cholinesterase inhibitors for potential application in Alzheimer’s disease. The molecular design integrates a π-conjugated THβC core with a cationic IM moiety to promote dual-site interactions within the acetylcholinesterase (AChE) active-site gorge. All compounds exhibited micromolar inhibitory activity against AChE and butyrylcholinesterase (BChE), with a pronounced preference for AChE. The most active derivative, 12d, showed an IC₅₀ value of 0.72 μM toward AChE, while compound 12c demonstrated the highest selectivity (SI = 8.4). Structure–activity relationship studies revealed that both stereochemistry and N-alkyl chain length are critical determinants of activity, with S,S-configured derivatives consistently outperforming their R,R-configured analogs. In silico ADMET analysis indicated favorable physicochemical properties and predicted central nervous system permeability, although potential hepatotoxicity highlights the need for further optimization. Molecular docking studies suggested that the most promising compound adopts a dual-binding mode, interacting with both the peripheral anionic site and catalytic active site of AChE. These results identify THβC-IM hybrids as a structurally novel and promising scaffold for the development of selective cholinesterase inhibitors, providing a basis for further optimization toward multifunctional anti-Alzheimer agents. Full article

Adsorption properties of graphene oxide (GO) and its organo-modified analog (GO-HDTMA), treated with the hexadecyltrimethylammonium (HDTMA) cationic surfactant, were evaluated for the removal of persistent pharmaceutical products (PPs): an anionic diclofenac (DCF) anti-inflammatory, a cationic metoprolol (MTP) beta-blocker, and a nonionic sulfamethoxazole (SMX) antibiotic. Adsorption isotherms, fitted by Langmuir and Freundlich models, together with FTIR data, demonstrate that both GO and GO-HDTMA are effective adsorbents for DCF. The adsorption is primarily governed by both π–π and van der Waals interactions, leading to saturation of the accessible C sp² carbon domains at a maximum uptake of 4.2 mmol g⁻¹. In contrast, due to its cationic nature, MTP is not removed using GO-HDTMA, while it is effectively adsorbed at about 0.5 mmol g⁻¹ for GO via electrostatic attractive forces. SMX is adsorbed by both materials, although its uptake remains limited on GO. The presence of hydrophobic domains in GO-HDTMA enhances SMX adsorption through weak intermolecular interactions. These results highlight the tunability of GO-based hybrid materials and their potential for the selective removal of a large spectrum of emerging pharmaceutical contaminants. Full article

Ten compounds have been prepared among them six different dioxido(pyridine-2,6-dicarboxylato)vanadate(V) compounds with piperazinium (H₂pip²⁺) (1·6H₂O), methylpiperazinium (H₂mepip²⁺) (2·5H₂O), ethylpiperazinium (H₂etpip²⁺) (3·3H₂O), isopropylpiperazinium (H₂isopip²⁺) (4·H₂O), phenylpiperazinium (Hphepip⁺) (5∙H₂O) and thiomorpholinium 1-oxide (HtmorO⁺) (6·2,6-H₂pydc·2H₂O) cations as counterions as well as methylpiperazinium (H₂mepip²⁺) salt of a mixed valence vanadium [VO(2,6-pydc)-(μ-O)-VO(H₂O)(2,6-pydc)]⁻ complex (7), thiomorpholin-4-ium vanadate (Htmor)VO₃ (8), hexa(thiomorpholin-4-ium) decavanadate hexahydrate (Htmor)₆[V₁₀O₂₈]·6H₂O (9·6H₂O) and organic salt cocrystal thiomorpholin-4-ium 6-carboxypicolinate pyridine-2,6-dicarboxylic acid (Htmor)⁺(2,6-Hpydc)⁻∙(2,6-H₂pydc)·2H₂O (10·2H₂O) via different pathways starting either from pyridine-2,6-dicarboxylic acid or its esters, and were structurally characterized by single-crystal X-ray diffraction. Extended hydrogen bonding interactions are present due to the presence of organic cations as well as due to the diverse roles of water molecules in the hydrogen bonding network. Centrosymmetric hydrogen bonding was found to be an important motif, and diverse supramolecular patterns were also observed due to a wide variety of C–H···O and π···π interactions stabilizing the crystal lattices. Full article

This study demonstrates the high efficiency and selectivity of p-toluenesulfonic acid-based deep eutectic solvents (DESs) for simultaneous extractive denitrogenation (EDN) and desulfurization (EDS) of model fuel. Three DESs—TBPB:PTSA, TBAB:PTSA, and ChCl:PTSA (1:1 molar ratio)—were synthesized and evaluated for their effectiveness against representative heteroaromatic pollutants: thiophene, dibenzothiophene, pyridine, and carbazole. The phosphonium-based TBPB:PTSA exhibited the highest extraction performance, achieving over 96% removal of nitrogen species and up to 85% removal of sulfur species at 40 °C. Increasing the temperature enhanced desulfurization by reducing viscosity, thereby improving mass transfer kinetics. Additionally, a 3:1 ratio of DES to fuel provided an optimal balance between solvent economy and operational efficiency. Denitrogenation was driven by strong acid–base protonation facilitated by PTSA, while desulfurization was governed by π–π and dispersion interactions, modulated by the hydrophobicity of the cations. The DES achieved nearly quantitative nitrogen removal and satisfactory sulfur extraction after three reuse cycles, while multistage operation enabled complete purification within four extraction steps. ¹H NMR analysis confirmed that no DES components were found in the raffinate phase, verifying the immiscibility and stability of the solvent. These results indicate that TBPB:PTSA is a robust, regenerable, and environmentally benign solvent, effectively enabling simultaneous EDN–EDS of hydrocarbon fuels and positioning it as a promising green alternative to traditional hydrogen-based refining methods. Full article

Background: Hepatitis B virus (HBV) infection continues to be a major public health concern, especially in sub-Saharan Africa, where widespread epidemics and restricted availability of long-term antiviral therapies result in higher mortality and morbidity rates. Drug repurposing represents a strategic approach to accelerate the discovery of effective therapies by leveraging agents with demonstrated antiviral and immunomodulatory activity. Product Nkabinde (PN) is a patented African polyherbal formulation initially developed for the treatment of HIV. Recent experimental studies demonstrate PN’s potent anti-HIV activity and significant immunomodulatory effects in human immune cells, implicating host-directed mechanisms relevant to chronic viral infections. This study combines an integrative application of network pharmacology and molecular docking to evaluate the repurposing potential of PN as a multi-target agent in HBV. Method: Bioactive components of PN were screened, and compound-associated targets were intersected with HBV-associated genes (proteins) to construct a protein–protein interaction (PPI) network. Topological analysis identified 10 hub targets (STAT1, STAT3, SRC, HCK, EGFR, SYK, PIK3CA, PIK3CB, PIK3R1, and PTPN11). Gene Ontology and KEGG pathway enrichment were performed with an FDR cut-off < 0.05. Significantly enriched pathways included JAK–STAT signaling, chemokine signaling, EGFR-TKI resistance, PI3K complex signaling, and viral infection pathways, particularly those related to Kaposi sarcoma virus and HSV-1, indicating immunoregulatory and antiviral roles. Molecular docking was performed using AutoDock Vina 1.1.2 to evaluate binding affinity and interaction mode of key PN phytochemicals against the hub proteins, and results were compared to their respective co-crystallized ligands. Results: Molecular docking indicated that major phytochemicals from PN exhibited significant binding affinities across all 10 hub host targets, typically outperforming or closely matching their respective co-crystallized ligands. The strongest contacts were observed for β-sitosterol–PIK3CB (−14.2 kcal/mol) and oleanolic acid–SYK (−14.0 kcal/mol), which were significantly stronger than the co-crystallized ligands (−7.9 and −8.3 kcal/mol, respectively), indicating robust stabilization within catalytic and regulatory pockets. Procyanidin B2 toward HCK (−10.5 vs. −7.9 kcal/mol) and PIK3CA (−9.5 vs. −7.3 kcal/mol), quercetin toward PIK3R1 (−10.6 vs. −8.2 kcal/mol) and PTPN11 (−9.2 vs. −7.5 kcal/mol), rutin toward SRC (−10.5 vs. 7.8 kcal/mol), and diosgenin toward EGFR (−9.4 vs. 8.4 kcal/mol). Procyanidin B2 maintained robust multi-hydrogen bonding networks, demonstrating significant binding, despite STAT1 and STAT3 docking showing identical affinities to co-crystals. Conserved hydrogen bonds, π–cation interactions, and significant hydrophobic packing at ATP-binding clefts and regulatory domains supported these interaction patterns, indicating competitive suppression of host signaling nodes taken over by HBV. Conclusions: Together, these results demonstrate that the components of PN possess strong multitarget binding capabilities across the PI3K/AKT, JAK–STAT, SRC-family kinase, EGFR, and SYK pathways, supporting their potential repurposing as host-directed HBV therapeutics with the ability to impede immune evasion, viral persistence, and HBV-associated oncogenic progression. Full article

Background: The ability of synthetic plastics to persist in the environment and the accumulation of microplastics has intensified the need to explore biological mechanisms capable of interacting with, and possibly degrading, polymeric materials. Microbial enzymes that have extensive catalytic flexibility represent promising candidates in this context. Aim: This study set out to examine the molecular interaction patterns and dynamical stability of Pseudomonas aeruginosa elastase (LasB) with representative structural fragments of typical synthetic plastics to assess the suitability of the enzyme to polymer-derived substrates. Methods: The crystallographic structure of LasB (PDB ID: 1EZM) was retrieved from the Protein Data Bank and pre-prepared with the help of AutoDock4.2.6 Tools. Those polymer-derived ligands that were associated with the major industrial plastics such as polyamide (PA), polyvinyl chloride (PVC), polycarbonate (PC), poly-ethylene terephthalate (PET), polymethyl methacrylate (PMMA), and polyurethane (PUR) were retrieved in the PubChem database and geometrically optimized with the help of the MMFF94 force field. AutoDock Vina, with a specific grid box around the catalytic pocket, including Zn²⁺ ion, was used to perform molecular docking simulations. PyMOL and BIOVIA Discovery Studio software were used to analyze binding conformations, interaction residues and types of intermolecular contacts. Phosphoramidon, a known metalloprotease inhibitor, served as a positive control to confirm the docking protocol. Additional assessment of the structural stability and conformational behavior of the enzyme–ligand complexes was conducted by molecular dynamics (MD) simulations with the Desmond engine and explicit solvent model in a 50 ns trajectory using the OPLS4 force field. RMSD, RMSF, radius of gyration, hydrogen bonding analysis and solvent accessibility parameters were used to measure structural stability. Results: The docking experiment showed varying binding affinities with the test polymers. Polycarbonate (−5.774 kcal/mol) and polyurethane (−5.707 kcal/mol) had the highest in-teractions with the LasB catalytic pocket, polyamide (−5.277 kcal/mol) and PET (−4.483 kcal/mol) followed PMMA and PVC, which had weaker affinities. The following were the important residues involved in interaction networks: Glu141, His140, Val137, Arg198, Tyr114, and Trp115 that were implicated in interaction networks with hydrophobic interactions, π-cation interactions and van der Waals forces that were the major stabilization forces. MD simulations had stabilized complexes, and RMSD values were found to be within acceptable ranges of stability, and ligand-specific changes (around 1.0-3.2 A), which is also in line with stable protein-ligand systems. Phosphoramidon used as a positive control had an RMSD of 1.205 A which is within this stability range. PCA determined various ligand-bound conformational states of LasB with PA in com-pact state, PC and PVC in intermediate states and PUR, PMMA and PET in ex-panded conformations, indicating structur-al stability and adaptability of the binding pocket. Conclusion: These findings show that LasB has a structurally flexible catalytic pocket that can accommodate a wide range of polymer-derived ligands. These results offer an insight into the recognition of enzymes with polymers at the molecular level and also indicate that LasB might help in the interaction of microorganisms with synthetic plastics in environmental systems. Full article

Perylene bisimide derivatives are typical n-type semiconductors as well as redox-active materials. However, it has been difficult to produce thin films by solution processes because of their low solubilities in organic solvents. Perylene bisimide derivatives bearing oligosiloxane moieties exhibit columnar phases over wide temperature ranges, including room temperature and high solubilities in organic solvents. The columnar phases are stabilized by nanosegregation between crystal-like one-dimensional π-stacks and liquid-like mantle consisting of oligosiloxane moieties. The electron mobility at room temperature exceeded 0.1 cm²V⁻¹s⁻¹ in the ordered columnar phases of perylene bisimide derivatives bearing four disiloxane chains. Uniaxially aligned thin films of the perylene bisimide derivatives bearing oligosiloxane moieties could be produced by a spin-coating method. The spin-coated films of the perylene bisimide derivatives bearing cyclotetrasiloxane rings could be insolubilized via in situ ring-opening polymerization by the exposure of the thin films to trifluoromethanesulfonic acid vapors. Uniaxially aligned thin films of perylene bisimide derivatives bearing an ethylene oxide chain as well as cyclotetrasiloxane rings could be doped in an aqueous solution of sodium dithionate, resulting in an anisotropic electrical conductivity. Polymerized thin films of perylene bisimide derivatives bearing a crown ether ring exhibited electrochromism in electrolyte solutions. These compounds formed 1:1 complexes with lithium triflate, exhibiting columnar phases at room temperature. The nanostructures of the complexes were stabilized by the electrostatic interaction between cationic crown-metal units and triflate anions. Full article