Search Results (19)

Asymmetric-atomic-structure catalysts can modulate the interactions between active sites and intermediates through their unique electronic filling states and asymmetric charge distribution, breaking the linear relationship between adsorption energy and activity, thereby enhancing the catalytic performance of the oxygen reduction reaction (ORR). By introducing heteroelements, vacancies, or clusters into symmetric-atomic-structure catalysts (e.g., M-N₄), asymmetric configurations (such as M-N_x, M-N_x-S/B/O, etc.) can be formed. These modifications substantially alter their internal structure, trigger charge redistribution, and create asymmetric sites to reduce reaction energy barriers, effectively regulating the adsorption strength of oxygen intermediates and significantly improving ORR performance. This review systematically summarizes recent advancements in asymmetric-atomic-structure catalysts for ORR, elucidating the intrinsic “structure–performance–application” relationships to provide theoretical guidance for developing high-performance asymmetric atomic catalysts. First, the ORR mechanisms, including the two-electron and four-electron pathways, are introduced. Furthermore, strategies to modulate catalyst selectivity and activity through doping with metallic/nonmetallic elements or introducing defects are discussed. Finally, prospects for asymmetric-atomic-structure catalysts in next-generation energy storage and conversion technologies are outlined, offering novel insights to overcome current ORR performance bottlenecks. Full article

Two-dimensional transition metal dichalcogenides have attracted considerable attention in electrocatalytic hydrogen evolution due to their unique layered structures and tunable electronic properties. However, prior research has predominantly focused on the intrinsic catalytic activity of planar few-layer structures, which offer limited exposure of edge-active sites due to their restricted two-dimensional geometry. Moreover, van der Waals interactions between layers impose substantial barriers to electron transport, significantly hindering charge transfer efficiency. To overcome these limitations, this study presents the innovative synthesis of high-quality single-screw WS₂ with a 5° dislocation angle via physical vapor deposition. Second harmonic generation measurements revealed a pronounced asymmetric polarization response, while the selected area electron diffractionand atomic force microscopy elucidated the material’s distinctive screwed dislocation configuration. In contrast to planar monolayer WS₂, the conical/screw-structured WS₂—formed through screw-dislocation-mediated growth—exhibits a higher density of exposed edge-active catalytic sites and enhanced electron transport capabilities. Electrochemical performance tests revealed that in an alkaline medium, the screwed WS₂ nanosheets exhibited an overpotential of 310 mV at a current density of −10 mA/cm², with a Tafel slope of 204 mV/dec. Additionally, under a current density of 18 mA/cm², the screwed WS₂ can sustain this current density for at least 30 h. These findings offer valuable insights into the design of low-cost, high-efficiency, non-precious metal catalysts for hydrogen evolution reactions. Full article

The full description of the mechanisms for the diffusion of substitutional impurities requires an account of the correlation of the atomic jumps. This study investigated the diffusion of phosphorus (P) and sulfur (S) in the fcc copper (Cu) single crystal using density functional theory (DFT). Vacancy formation energies and impurity–vacancy interactions were calculated, revealing attractive interactions of P and S with the vacancies. The attractive interactions between S and a vacancy were roughly twice as strong as those between P and a vacancy. The 5-frequency—or 5-jump—model was employed to describe the correlation effects during diffusion. The potential energy profiles and activation energies were determined for the different jump paths necessary for the model and to account for all the correlation effects in substitutional impurity diffusion in the single crystal. The results indicated that S diffuses significantly faster than P in Cu, primarily due to lower activation energies for certain jump paths and a more favorable vacancy–impurity interaction. This occurs because when bonding with the crystal, S tends to prefer atomic sites with larger volumes and more asymmetric geometric arrangements when compared to P. This favors the interactions between S and the vacancies, and reduces friction with the matrix during the diffusion of S. The effective diffusion coefficients were calculated and compared with experimental data. The findings provide insights into the diffusion mechanisms of P and S in Cu and how these can be affected by the presence of extended defects such as grain boundaries. Full article

Trinuclear metallacyclic oxidovanadium(V) complexes, [{VO(L³⁺²R)}₃] (1–3) with asymmetric multidentate linking ligands (H₃L³⁺²R: R = H, Me, Br), were synthesized. The molecular structure of 1 is characterized as a tripod structure, with each V(V) ion coordinated by ONO-atoms from a tridentate Schiff base site and ON-atoms from a bidentate benzoxazole site of two respective H₃L³⁺²H ligands. The intramolecular V⋯V distances range from 8.0683 to 8.1791 Å. Complex 4 is a mononuclear dioxidovanadium(V) complex, (Et₃NH)[VO₂(HL³⁺²H)]. Cyclic voltammograms of 1−3 in DMF revealed redox couples attributed to three single-electron transfer processes. Full article

The stoichiometric ratio 2:1 mix of 1-phenylpiperazine and oxalic acid dihydrate followed by slow evaporation results in a new material, bis(4-phenylpiperazin-1-ium) oxalate dihydrate, with the general chemical formula (C₁₀H₁₅N₂)₂(C₂O₄).2H₂O, indicated by PPOXH. The title compound’s asymmetric unit and three-dimensional network have been determined by single crystal X-ray diffraction. Intermolecular O-H…O, N-H…O and C-H…O hydrogen bonding assist in maintaining and stabilization of the crystal structure of this new compound. Hirshfeld surface analysis and two-dimensional fingerprints have been performed to quantify the non-covalent interactions in the PPOXH structure. The vibrational modes of the different characteristic groups of the title chemical were identified using infrared spectrum analysis. The thermal characterization of this product was studied by a coupled TG/DTA analysis. The ultraviolet-visible absorption spectrum has been used to study the optical properties and the energy gap of this compound. DFT calculations were employed to evaluate the composition and properties of PPOXH. The analysis of HOMO-LUMO frontier orbitals analysis allows us to understand the chemical reactivity of this supramolecular compound and to determine the electrophilic and nucleophilic sites responsible for electron transfer. Topological analysis (AIM), reduced density gradient (RDG), molecular electrostatic potential surface (MEPS) and Mulliken population were analyzed to evaluate the types of non-covalent interactions, localization of electrons in space, atomic charges and molecular polarity in depth. Full article

This work covers the development of non-fullerene acceptors for use in organic photovoltaics built using the N-annulated perylene diimide dye. The classic perylene diimide dye has been extensively used to construct non-fullerene acceptors, leading to device power conversion efficiencies of over 10%. Strong visible light absorption and deep frontier molecular energy levels have made such materials (both molecular and polymeric) near ideal for pairing with narrow-gap conjugated polymers in bulk-heterojunction active layers. The N-annulation of the dye provides an extra site for side-chain engineering and alters the electronic structure of the polycyclic aromatic core. In addition, N-annulation allows for selective bromination of the perylene core, leading to building blocks that are useful for the construction of large molecular frameworks using the atom-economical direct heteroarylation cross-coupling method. Herein, we detail a series of molecules developed by our team that are based on the N-annulated perylene diimide in the form of dimers with different cores (both electron-rich and electron-deficient); dimers with varied side chains; tetramers with varying geometries; and large, asymmetric molecules with internal energy cascades. The use of these molecules as non-fullerene acceptors in organic photovoltaic devices (binary and ternary blends, outdoor and indoor light applications, and spin-coated vs. slot-die-coated photoactive layers) is presented. Full article

Energy is the substance foundation of human society. Single−atom catalysts (SACs) have emerged as promising electrode materials in the energy field owing to their unique characteristics. It was demonstrated that the hydrogen evolution reaction (HER) performance of SACs relies on the metal−centric species and the corresponding local coordination engineering. Herein, the recent progress relating to asymmetric atomic catalysts for the HER is reviewed, including low coordination, heteroatomic coordination, and bimetallic coordination. In addition, the connection between the coordination structures and the presented electrocatalytic performance was discussed. The main challenges that need to be addressed for the asymmetric atomic catalysts in the HER are summarized. Finally, some insights into the development of high−quality asymmetric atomic catalysts are included. Full article

Single-atom catalysts (SACs) have emerged as well-known catalysts in renewable energy storage and conversion systems. Several supports have been developed for stabilizing single-atom catalytic sites, e.g., organic-, metal-, and carbonaceous matrices. Noticeably, the metal species and their local atomic coordination environments have a strong influence on the electrocatalytic capabilities of metal atom active centers. In particular, asymmetric atom electrocatalysts exhibit unique properties and an unexpected carbon dioxide reduction reaction (CO₂RR) performance different from those of traditional metal-N₄ sites. This review summarizes the recent development of asymmetric atom sites for the CO₂RR with emphasis on the coordination structure regulation strategies and their effects on CO₂RR performance. Ultimately, several scientific possibilities are proffered with the aim of further expanding and deepening the advancement of asymmetric atom electrocatalysts for the CO₂RR. Full article

Serotonin receptors are involved in a number of physiological functions and regulate aggression, anxiety, appetite, cognition, learning, memory, mood, nausea, sleep, and thermoregulation. Here we report synthesis and detailed structural and behavioral studies of three indole derivatives: D2AAK5, D2AAK6, and D2AAK7 as serotonin 5-HT_1A and 5-HT_2A receptor ligands. X-ray studies revealed that the D2AAK5 compound crystallizes in centrosymmetric triclinic space group with one molecule in the asymmetric unit. The main interaction between the ligands and the receptors is the salt bridge between the protonatable nitrogen atom of the ligands and the conserved Asp (3.32) of the receptors. The complexes were stable in the molecular dynamic simulations. MD revealed that the studied ligands are relatively stable in their binding sites, with the exception of D2AAK7 in the serotonin 5-HT_1A receptor. D2AAK7 exerts anxiolytic activity in the EPM test, while D2AAK5 has a beneficial effect on the memory processes in the PA test. Full article

The σ-hole interaction represents a noncovalent interaction between atoms with σ-hole(s) on their surface (such as halogens and chalcogens) and negative sites. Over the last decade, significant developments have emerged in applications where the σ-hole interaction was demonstrated to play a key role in the control over chirality. The aim of this review is to give a comprehensive overview of the current advancements in the use of σ-hole interactions in stereoselective processes, such as formation of chiral supramolecular assemblies, separation of enantiomers, enantioselective complexation and asymmetric catalysis. Full article

The changes in the local and global dynamics of azide-labelled lysozyme compared with that of the wild type protein are quantitatively assessed for all alanine residues along the polypeptide chain. Although attaching -N${}_3$ to alanine residues has been considered to be a minimally invasive change in the protein it is found that depending on the location of the alanine residue, the local and global changes in the dynamics differ. For Ala92, the change in the cross-correlated motions are minimal, whereas attaching -N${}_3$ to Ala90 leads to pronounced differences in the local and global correlations as quantified by the cross-correlation coefficients of the C${}_{\alpha }$ atoms. We also demonstrate that the spectral region of the asymmetric azide stretch distinguishes between alanine attachment sites, whereas changes in the low frequency, far-infrared region are less characteristic. Full article

In this study, a new cobalt arsenate belonging to the alluaudite supergroup compounds with the general formula of Co₃(AsO₄)_0.5+x(HAsO₄)_2−x(H₂AsO₄)_0.5+x[(H,□)_0.5(H₂O,H₃O)_0.5]^2x+ (denoted as CoAsAllu) was synthesized under hydrothermal conditions. Its crystal structure was determined by a room-temperature single-crystal X-ray diffraction analysis: space group C2/c, a = 11.6978(8), b = 12.5713(7), c = 6.7705(5) Å, β = 113.255(5)°, V = 914.76(11) ų, Z = 2 for As₆H₈Co₆O₂₅. It represents a new member of alluaudite-like protonated arsenates and the first alluaudite-like phase showing both protonation of the tetrahedral site and presence of the H₂O molecules in the channels. In the asymmetric unit of CoAsAllu, one of the two Co, one of the two As and one of the seven O atoms lie at 4e special positions (site symmetry 2). The crystal structure consists of the infinite edge-shared CoO₆ octahedra chains, running parallel to the [10$\overline{1}$] direction. The curved chains are interconnected by [(As1O₄)_0.5(H₂As1O₄)_0.5]²⁻ and [HAs₂O₄]²⁻ tetrahedra forming a heteropolyhedral 3D open framework with two types of parallel channels. Both channels run along the c-axis and are located at the positions (1/2, 0, z) and (0, 0, z), respectively. The H2 and H4 hydrogen atoms of O2H2 and O4H4 hydroxyl groups are situated in channel 1, while the uncoordinated water molecule H₂O7 at half-occupied 4e special positions and hydrogen atoms of O6H6 hydroxyl group were found in channel 2. The results of the magnetic investigations confirm the quasi one-dimensional structure of divalent cobalt ions. They are antiferromagnetically coupled with the intrachain interaction parameter of J ≈ −8 cm⁻¹ and interchain parameter of J’ ≈ −2 cm⁻¹ that become effective below the Néel temperature of 3.4 K. Full article

Local structure of Pd₁ single sites on the surface of Pd₁In₁ intermetallic nanoparticles supported on α-Al₂O₃ was investigated by the combination of CO-DRIFTS spectroscopy and DFT. CO-DRIFTS spectra of PdIn/Al₂O₃ catalyst exhibit only one asymmetric absorption band of linearly adsorbed CO comprising two peaks at 2065 and 2055 cm⁻¹ attributable to CO molecules coordinated to Pd₁ sites located at (110) and (111) facets of PdIn nanoparticles. The absence of bridged or hollow-bonded CO bands indicates that multipoint adsorption on PdIn nanoparticles is significantly hindered or impossible. DFT results show that on (110) facet multipoint CO adsorption is hindered due to large distance between neighboring Pd atoms (3.35 Å). On (111) facet multipoint CO adsorption on surface palladium atoms is impossible, since adjacent Pd atoms are located below the surface plane. Full article

Highly functionalized spirocyclic ketals were synthesized through asymmetric oxidative spirocyclization via carbanion-induced ring transformation of 2H-pyran-2-ones with 1,4-cyclohexandione monoethyleneketal under alkaline conditions. Further acidic-hydrolysis of obtained spirocyclic ketals yields highly substituted 2-tetralone in good yield. Computational analysis based on the DFT calculations and MD simulations has been performed in order to predict and understand global and local reactivity properties of newly synthesized derivatives. DFT calculations covered fundamental reactivity descriptors such as molecular electrostatic potential and average local ionization energies. Nitrogen atom and benzene rings have been recognized as the most important molecular sites from these aspects. Additionally, to predict whether studied compounds are stable towards the autoxidation mechanism, we have also studied the bond dissociation energies for hydrogen abstraction and identified the derivative which might form potentially genotoxic impurities. Interactions with water, including both global and local aspects, have been covered thanks to the MD simulations and calculations of interaction energies with water, counting of formed hydrogen interactions, and radial distribution functions. MD simulations were also used to identify which excipient could be used together with these compounds, and it has been established that the polyvinylpyrrolidone polymer could be highly compatible with these compounds, from the aspect of calculated solubility parameters. Full article

Cathepsin D (CatD; EC 3.4.23.5) family peptidases of parasitic organisms are regarded as potential drug targets as they play critical roles in the physiology and pathobiology of parasites. Previously, we characterized the biochemical features of cathepsin D isozyme 2 (CatD2) in the carcinogenic liver fluke Clonorchis sinensis (CsCatD2). In this study, we performed all-atomic molecular dynamics simulations by applying different systems for the ligand-free/bound forms under neutral and acidic conditions to investigate the pH-dependent structural alterations and associated functional changes in CsCatD2. CsCatD2 showed several distinctive characteristics as follows: (1) acidic pH caused major conformational transitions from open to closed state in this enzyme; (2) during 30–36-ns simulations, acidic pH contributed significantly to the formation of rigid β-sheets around the catalytic residue Asp₂₁₉, higher occupancy (0% to 99%) of hydrogen bond than that of Asp₃₃, and enhanced stabilization of the CsCatD2-inhibtor complex; (3) neutral pH-induced displacement of the N-terminal part to hinder the accessibility of the active site and open allosteric site of this enzyme; and (4) the flap dynamics metrics, including distance (d₁), TriCα angles (θ₁ and θ₂), and dihedral angle (ϕ), account for the asymmetrical twisting motion of the active site of this enzyme. These findings provide an in-depth understanding of the pH-dependent structural dynamics of free and bound forms of CsCatD2 and basic information for the rational design of an inhibitor as a drug targeting parasitic CatD. Full article