Search Results (101)

In the context of the valorization of agri-food by-products, tomato (Solanum lycopersicum L.) seeds represent a protein-rich matrix containing potential bioactives. The aim of the present work is to develop a biochemical pipeline for (i) achieving high protein recovery from tomato seed, (ii) optimizing the hydrolysis with different proteases, and (iii) characterizing the resulting peptides. This approach was instrumental for obtaining and selecting the most promising peptide mixture to test for antifungal activity. To this purpose, proteins from an alkaline extraction were treated with bromelain, papain, and pancreatin, and the resulting hydrolysates were assessed for their protein/peptide profiles via SDS-PAGE, SEC-HPLC, and RP-HPLC. Bromelain hydrolysate was selected for antifungal tests due to its greater quantity of peptides, in a broader spectrum of molecular weights and polarity/hydrophobicity profiles, and higher DPPH radical scavenging activity, although all hydrolysates exhibited antioxidant properties. In vitro assays demonstrated that the bromelain-digested proteins inhibited the growth of Fusarium graminearum and F. oxysporum f.sp. lycopersici in a dose-dependent manner, with a greater effect at a concentration of 0.1 mg/mL. The findings highlight that the enzymatic hydrolysis of tomato seed protein represents a promising strategy for converting food by-products into bioactive agents with agronomic applications, supporting sustainable biotechnology and circular economy strategies. Full article

The two-spotted spider mite Tetranychus urticae Koch (Acari: Tetranychidae) is a major pest of horticultural, ornamental, fruit, and strawberry crops worldwide. Currently, various management tools have been explored for this pest, with nanoparticles being one of them, which stand out for their characteristics and multiple effects. This study evaluated the effects of green-synthesized gold nanoparticles (AuNPs) on the mortality and repellency of T. urticae and its natural predator Phytoseiulus persimilis under laboratory conditions, as well as their efficacy in greenhouse tomatoes against T. urticae. In the laboratory, a biological window for AuNPs (50–100 mg L⁻¹) on the pest and predator was established using a residual film method and a free-choice assay. In the greenhouse, four concentrations (300, 500, 750, and 1000 mg L⁻¹) were evaluated via foliar application at 10-day intervals. The results showed susceptibility to AuNPs in all stages of T. urticae and the adult P. persimilis. The death times from AuNPs were similar in both species. Furthermore, the AuNPs were selective for the pest rather than the natural enemy. In greenhouses, AuNPs affected T. urticae populations in tomato plants, and significant differences were observed on some continuous and final agronomic variables (associated with fruits). This study showed that T. urticae and P. persimilis were susceptible to green-synthesized AuNPs. AuNPs can be a management tool, although studies on other non-target species and estimating agronomic effects on other crops are recommended. Full article

Rice is a staple food for over half of the world’s population, and it is grown in over 100 countries. Rice blast disease can cause 10% to 30% crop loss, enough to feed 60 million people. Breeding for resistance can help farmers avoid costly fungicides. This study assessed the relationship between rice blast disease and zinc or anthocyanin content in biofortified rice. Susceptibility to foliar and panicle blast was assessed in a rice panel which differed on grain zinc content and pigmentation. A rice panel (n = 23) was challenged with inoculum of two isolates of Magnaporthe oryzae in a screenhouse-based assay. The zinc content with foliar blast severity was analyzed in the leaves and grain of a subset of non-inoculated rice plants. The effect of foliar zinc supplementation on seedlings was assessed by varying levels of zinc fertilizer solution on four blast susceptible cultivars at 14 days after planting (DAP), followed by inoculation with the blast pathogen at 21 DAP. Foliar blast severity was scored on a 0–9 scale at 7 days after inoculation. The rice panel was scored for anthocyanin content, and the data were correlated with foliar blast severity. The panel was grown in the field, and panicle blast, grain yield and yield-related agronomic traits were measured. Significant differences were observed in foliar blast severity among the rice genotypes, with IRBLK-KA and IR96248-16-2-3-3-B having mean scores greater than 4, as well as BASMATI 370 (a popular aromatic variety), while the rest of the genotypes were resistant. Supplementation with foliar zinc led to a significant decrease in susceptibility. A positive correlation was observed between foliar and panicle blast. The Zn in the leaves was negatively correlated with foliar blast severity, and had a marginally positive correlation with panicle blast. There was no relationship between foliar blast severity and anthocyanin content. Grain yield had a negative correlation with panicle blast, but no correlation was observed between Zn in the grain and grain yield. This study shows that Zn biofortification in the grain may not enhance resistance to foliar and panicle blast. Furthermore, the zinc-biofortified genotypes were not agronomically superior to the contemporary rice varieties. There is a need to apply genomic selection to combine promising alleles into adapted rice genetic backgrounds. Full article

Weeds present a pervasive challenge in agricultural fields. The integration of herbicide-resistant crops with chemical weed management offers an effective solution for sustainable weed control while reducing labor inputs, particularly in large-scale intensive farming systems. Consequently, the development of herbicide-resistant cultivars has emerged as an urgent priority. In this study, we found that the G311E mutant gene of Arabidopsis MATE (multidrug and toxic compound extrusion) family transporter DTX6, designated DTX6m, confers robust resistance to bipyridyl herbicides paraquat and diquat in rice. DTX6m-overexpression lines exhibited marked resistance to these two herbicides, tolerating diquat concentrations up to 5 g/L, which is five-fold higher than the recommended field application dosage. Agronomic assessments demonstrated that grain yields of DTX6m-overexpressing plants were statistically equivalent to those of wild-type plants. Moreover, the plants displayed beneficial phenotypic changes, such as accelerated flowering and a slight reduction in height. Seed morphometric analysis indicated that in comparison with the wild-type control, DTX6m-transgenic lines exhibited altered grain dimensions while maintaining consistent 1000-grain weight. Nutritional assays further demonstrated that DTX6m increased the levels of free amino acids in seeds, while normal protein and starch contents were retained. Collectively, these results establish that DTX6m effectively boosts rice resistance to paraquat and diquat, validating DTX6m as a candidate gene for engineering plant herbicide resistance and also implying a potential role for DTX6m in amino acid homeostasis in plants. Full article

Grapes are rich in bioactive compounds, including phenolics and anthocyanins, which exhibit antioxidant properties and offer potential health benefits. The accumulation of these compounds is influenced by agronomic practices, particularly rootstock selection and training systems. This study evaluated the effects of different rootstocks (‘IAC 766 Campinas’ and ‘106-8 Mgt’) and training systems (low and high vertical shoot positioning) on the polyphenolic composition and antioxidant activity in the skins and pulps of Vitis labrusca and Brazilian hybrid grapes. The analyses included total phenolics, total flavonoids, monomeric anthocyanins, and antioxidant activity (DPPH and FRAP assays), as well as the individual polyphenolic profile in grape skins. The results indicated that both rootstock and training system significantly affected the accumulation of bioactive compounds and antioxidant capacity. Grapes trained on high trellises exhibited higher concentrations of bioactive compounds, while those from low trellises showed an enhanced phenolic composition. Among Vitis labrusca varieties, ‘Bordô’ had the highest bioactive compounds, while ‘Isabel’ stood out for specific phenolic acids. In hybrid cultivars, the ‘106-8 Mgt’ rootstock boosted antioxidant compounds, while ‘IAC 766 Campinas’ enhanced flavonoid, anthocyanin, and phenolic acid levels. Malvidin-3-O-glucoside emerged as the predominant anthocyanin. These findings underscore the importance of optimizing rootstock selection and training systems to enhance the phenolic composition and antioxidant potential of grapes. Full article

Bacterial leaf streak (BLS) is one of the internationally significant quarantine diseases in rice. Effectively utilizing BLS resistance genes from wild rice (Oryza rufipogon Griff.) to breed new varieties offers a fundamental solution for BLS control. This study focused on the fine mapping of the BLS resistance gene bls2 and the development of closely linked molecular markers for breeding BLS-resistant lines. Using a Guangxi common wild rice accession DY19 (carrying bls2) as the donor parent and the highly BLS-susceptible indica rice variety 9311 as the recipient parent, BLS-resistant rice lines were developed through multiple generations of backcrossing and selfing, incorporating molecular marker-assisted selection (MAS), single nucleotide polymorphism(SNP) chip genotyping, pathogen inoculation assays, and agronomic trait evaluation. The results showed that bls2 was delimited to a 113 kb interval between the molecular markers ID2 and ID5 on chromosome 2, with both markers exhibiting over 98% accuracy in detecting bls2. Four stable new lines carrying the bls2 segment were obtained in the BC₅F₄ generation. These four lines showed highly significant differences in BLS resistance compared with 9311, demonstrating moderate resistance or higher with average lesion lengths ranging from 0.69 to 1.26 cm. Importantly, no significant differences were observed between these resistant lines and 9311 in key agronomic traits, including plant height, number of effective panicles, panicle length, seed setting rate, grain length, grain width, length-to-width ratio, and 1000-grain weight. Collectively, two molecular markers closely linked to bls2 were developed, which can be effectively applied in MAS, and four new lines with significantly enhanced resistance to BLS and excellent agronomic traits were obtained. These findings provide technical support and core germplasm resources for BLS resistance breeding. Full article

Silicon application shows potential for enhancing crop resistance to pests while improving productivity. This study evaluated silicon’s effects on agronomic traits and chemical composition of biomass sorghum (Sorghum bicolor) under aphid infestation (Melanaphis sorghi (Theobald, 1904) (Hemiptera: Aphididae)). Greenhouse-grown sorghum (hybrid BRS716) was treated with silicic acid (0, 2, 4, or 6 metric tons per hectare), applied at sowing and the five-leaf stage. Aphid-infested plants were monitored weekly for damage, alongside growth measurements (height, stem diameter, leaf retention). Post-harvest, fresh, and dry biomass were analyzed via near-infrared spectroscopy and chemical assays. Data were assessed using ANOVA and regression models. Results demonstrated that silicon reduced aphid infestation and damage at 6 metric tons per hectare. Silicon also increased cellulose content and improved phosphorus and calcium uptake, though nitrogen and potassium levels decreased. These findings suggest that silicon supplementation can strengthen sorghum’s natural defenses, enhance biomass production, and modify nutrient profiles. This approach offers a sustainable strategy to mitigate aphid damage while maintaining crop yield and quality, with potential applications in integrated pest management systems. Full article

The aim of this study was to evaluate the influence of various agronomic factors on plant growth and the accumulation of secondary metabolites with antioxidant properties. The three Mediterranean Officinal Wild Plants selected for this investigation were Silybum marianum, Achillea millefolium, and Trifolium pratense whose extracts, enriched in phenolic compounds, are well documented for their potential therapeutic effects. Three agronomic factors were evaluated, each with two treatment options, resulting in eight experimental combinations: (1) inoculation with plant growth-promoting rhizobacteria (PGPR) versus control (no inoculation); (2) high versus low fertilization rates of K₂O and P₂O₅ to modulate nutrient availability; (3) water stress at 40% of field capacity compared to the control with full field capacity. Plant growth was monitored using the BBCH (Biologische Bundesanstalt, Bundessortenamt and CHemical industry) scale to delineate key phenological phases, with treatments applied until the flowering stage was reached. Only the leaves of the plants were collected, and hydroalcoholic extracts were prepared for the evaluation of total antioxidant capacity (TAC) using the FRAP, DPPH, and ABTS assays. These assays were selected due to their complementary insights into the chemical mechanisms underlying TAC, as well as their ability to assess the physicochemical characteristics of the phytochemical constituents. Full article

Mycotoxins are among the primary factors compromising food quality and safety. To investigate mycotoxin contamination, microbial diversity, and functional profiles in maize across distinct geographic regions, this study analyzed samples from Xuanwei, Fuyuan, and Zhanyi. Mycotoxin concentrations were quantified through standardized assays, while microbial community structures were characterized using metagenomics sequencing. Metabolic pathways, functional genes, and enzymatic activities were systematically annotated with the KEGG, eggNOG, and CAZy databases. The results demonstrated an absence of detectable aflatoxin (AF) levels. Deoxynivalenol (DON) concentrations varied significantly among experimental cohorts, although all values remained within regulatory thresholds. Zearalenone (ZEN) contamination exceeded permissible limits by 40%. The metagenomic profiling identified 85 phyla, 1219 classes, 277 orders, 590 families, 1171 genera, and 2130 species of microorganisms, including six mycotoxigenic fungal species. The abundance and diversity of microorganisms were similar among different treatment groups. Among 32,333 annotated KEGG pathways, primary metabolic processes predominated (43.99%), while glycoside hydrolases (GH) and glycosyltransferases (GT) constituted 76.67% of the 40,202 carbohydrate-active enzymes. These empirical findings establish a scientific framework for optimizing agronomic practices, harvest scheduling, and post-harvest management in maize cultivation. Full article

Drought is a negative agronomic effect that can lead to an increase in reactive oxygen species (ROS) levels. Excessive drought can severely alter cell membrane fluidity and permeability, significantly reducing cell viability. The Gibberellic acid-stimulated Arabidopsis (Snakin/GASA) gene family has an important role as antioxidants in inhibiting the accumulation of ROS and improving crop drought resistance. However, the regulatory mechanism of potato StSnakin-2 (StSN2) in response to drought, along with how StSN2 expression is regulated, is not well understood. In this study, we found that StSN2 was induced by drought. Overexpression of StSN2 significantly increased drought tolerance, whereas silencing StSN2 increased sensitivity to drought. Overexpression of StSN2 resulted in higher antioxidant enzyme (superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD)) activity, and lowered hydrogen peroxide (H₂O₂) and malondialdehyde (MDA) accumulation during drought stress. Also, overexpression of StSN2 increased the relative water content (RWC) of leaves and reduced the water loss in leaves. We screened the upstream regulatory protein translation-controlled tumor protein (StTCTP) of StSN2 through DNA pull-down combined with mass spectrometry. Yeast one-hybrid (YIH), electrophoretic mobility shift assay (EMSA), and luciferase reporting assay (LUC) indicated that StTCTP binds the StSN2 promoter. Like StSN2, StTCTP was highly expressed in response to drought. Overexpression of StTCTP increased the photosynthetic rate and CAT enzyme activity, and lowered H₂O₂ and MDA accumulation during drought. Meanwhile, overexpression of StTCTP increased leaf RWC and reduced water loss. Our research strongly suggested that StSN2 effectively cleared ROS and significantly boosted the drought resistance of potatoes. Furthermore, as a transcriptional activator of StSN2, StTCTP, much like StSN2, also enhanced the potato’s drought tolerance. The results provided a foundation for the further study of StSN2 regulatory mechanisms under drought stress. Full article

The plant growth-promoting bacterium, B. subtilis subsp. Spizizizenii, has been proven to develop a biofilm under certain culture conditions, which can be applied as an efficient bioinoculant. Biofilm can be produced cost-effectively using biodiesel byproduct glycerol as a carbon source. Soils from urban peripheries may contain very high lead (Pb) levels. The main aim of this study was to assess the impact of biofilm seed inoculation on plant development and fruit quality of tomatoes growing on a Pb-contaminated substrate. Also, effects of excess Pb on biofilm production, stability, and seed germination were analyzed. B. subtilis biofilm was produced with Pb concentrations ranging from 0 to 300 ppm. Biofilm stability was tested at 4 °C and 25 °C. The impacts of Pb and inoculation on seed germination were evaluated in laboratory conditions, while the impacts on plant agronomic parameters were assessed via a greenhouse assay. Adding Pb to the culture medium increased biofilm production by about 20%. Regardless of Pb level, biofilms were more stable at 4 °C than at 25 °C. Beneficial effects of biofilm on germination were greater on seeds exposed to 200 and 300 ppm Pb. Excess Pb significantly reduced plant biomass and tomato yield. However, biofilm inoculation significantly increased plant aboveground and root biomass, plant height, leaf area, fruit number, and fruit size, regardless of substrate Pb excess. Tomato fruits of plants grown in the metal-contaminated substrate showed no significant increases in Pb concentration with respect to the control. In summary, the biofilm produced by B. subtilis subsp. spizizenii proved to be an effective bioinoculant to counteract the negative effects of substrate excess Pb on tomato germination, growth, and production. Full article

Peanut allergies affect millions of people worldwide, often causing life-threatening reactions and necessitating strict avoidance. Recent advancements in oral immunotherapy, such as Palforzia™, and IgE-mediated treatments (e.g., Xolair), have improved care options; however, their high costs limit accessibility and widespread utility. To address these challenges, researchers are employing conventional breeding and advanced molecular tools, such as CRISPR editing, to develop peanut lines with reduced levels of major allergenic proteins (Ara h1, Ara h2, Ara h3, and Ara h6). These reduced-immunogenicity genotypes retain their agronomic viability, flavor, and nutritional quality to some extent, offering the potential for cost-effective oral immunotherapy and safe food options for use in public spaces by non-allergic individuals. Rigorous evaluation, including immunological assays and human feeding trials, is essential to confirm their effectiveness in reducing allergic reactions. Adoption will depend on the establishment of clear regulatory guidelines, stakeholder education, and transparent communication of the benefits and risks. With sustained research, public trust, and supportive policies, reduced-immunogenicity peanuts could substantially lower the global burden of peanut allergies. This communication examined the impact of peanut allergies worldwide and explored strategies to develop peanut genotypes with reduced allergen content, including conventional breeding and advanced genetic engineering. It also addressed the challenges associated with these approaches, such as policy and regulatory hurdles, and outlined key requirements for their successful adoption by farmers and consumers. Full article

Awn length is a significant agronomic trait in rice. To analyze the genetic mechanism of awn length in the chromosome segment substitution line 29 (CSSL29) derived from 9311 (recipient) into Nipponbare (NIP, donor), an F₂ segregated population was constructed from 9311 (indica) and CSSL29. The population and candidate genes were analyzed using quantitative trait loci sequencing (QTL-seq), yeast two-hybrid assays, and 3 k and 10 k rice population databases. The results indicated that the awn length in the F₂ segregating population followed a normal distribution, and the long-awn phenotype in CSSL29 was controlled by multiple genes. Through BSA sequencing data, a major QTL qAWN4 associated with rice awn length was identified on chromosome 4, containing the cloned gene An-2. Further investigation of the CSSL29 long-awn substitution segment revealed the presence of the awn length gene An-1, with both genes exhibiting an additive effect on the regulation of the long-awn phenotype. Yeast two-hybrid experiments confirmed no interaction between An-2 and An-1, suggesting that additive effect awn length regulation is not mediated through simple protein-to-protein binding. Population genetic analysis indicated that the An-2 allele was artificially selected during domestication but did not significantly differ between indica and japonica subspecies. These findings enhance our understanding of the genetic regulation of rice awn length and the domestication of long-awn rice, laying the groundwork for future research in this area. Full article

Drought stress significantly affects plant growth, productivity, and yield by inducing morphological, physiological, and biochemical changes. This study evaluates exogenous melatonin effects on agronomic and biochemical traits of two broccoli varieties (Brassica oleracea L. var. italica Plenck) at the baby-leaves stage under drought stress. The varieties used were the Sicilian sprouting black broccoli, Broccolo nero (BR), and the commercial one, Cavolo Broccolo Ramoso Calabrese (CR). The experiment was conducted in a cold greenhouse in Catania, Sicily, considering two levels of melatonin (0 and 100 µmol L⁻¹) under two irrigation regimes: 100% and 60% of pot water capacity (I100 and I60). Plant weight, SPAD index, and leaf parameters were affected by the melatonin treatment, irrigation regime, and genotypes. Total glucosinolates were highest in BR under melatonin treatment (M1) at full irrigation (I100). Significant differences were observed for glucosinolates and phenolic profiles. Specifically, CR showed significantly higher glucoraphanin content compared to BR. CR, in response to the combined M1-I60 treatment, exhibited a marked increase in total phenolic content (TPC), reaching its highest level among the tested conditions. Similarly, antioxidant capacity, evaluated through ABTS and FRAP assays, showed a significant improvement in BR under combined treatments. Additionally, the caffeic acid hexose varies from 5.11 to 8.93% for control (M0) and melatonin application (M1). These findings highlight melatonin’s potential to mitigate drought stress effects in broccoli. Full article

Populus deltoides holds significant ecological and economic importance and is a crucial gene donor for the world’s staple poplar varieties. To select and breed P. deltoides with improved agronomic traits, nine growth and leaf traits were examined in 375 different genotypes, assessing their genetic diversity and performing correlation and comprehensive ranking analyses. Phenotyping results were then utilized to screen a total of 2,009,263 SNP (single nucleotide polymorphism) loci significantly associated with the nine phenotypic traits. A total of 45 SNP loci exhibited significant associations with growth traits based on a general linear model (GLM) analysis. By analyzing the Linkage disequilibrium (LD) block of five SNP loci with significant leaf area and height, we identified five candidate genes related to leaf area and height. Three of the five SNP loci were successfully validated using KASP (kompetitive allele-specific PCR) assays. One loci Chr08_16007979 was closely linked with leaf area, and two loci Chr05_12148738, and Chr05_17106547 were closely linked with height. The developed functional KASP markers offer valuable insights for subsequent further marker-assisted breeding and genetic improvement studies in southern-type poplars. Full article