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11 pages, 6272 KiB  
Communication
A Natural Language Processing Method Identifies an Association Between Bacterial Communities in the Upper Genital Tract and Ovarian Cancer
by Andrew Polio, Vincent Wagner, David P. Bender, Michael J. Goodheart and Jesus Gonzalez Bosquet
Int. J. Mol. Sci. 2025, 26(15), 7432; https://doi.org/10.3390/ijms26157432 (registering DOI) - 1 Aug 2025
Abstract
Bacterial communities within the female upper genital tract may influence the risk of ovarian cancer. In this retrospective cohort pilot study, we aim to detect different communities of bacteria between ovarian cancer and normal controls using topic modeling, a natural language processing tool. [...] Read more.
Bacterial communities within the female upper genital tract may influence the risk of ovarian cancer. In this retrospective cohort pilot study, we aim to detect different communities of bacteria between ovarian cancer and normal controls using topic modeling, a natural language processing tool. RNA was extracted and analyzed using the VITCOMIC2 pipeline. Topic modeling assessed differences in bacterial communities. Idatuning identified an optimal latent topic number and Latent Dirichlet Allocation (LDA) assessed topic differences between high-grade serous ovarian cancer (HGSOC) and controls. Results were validated using The Cancer Genome Atlas (TCGA) HGSOC dataset. A total of 801 unique taxa were identified, with 13 bacteria significantly differing between HGSOC and normal controls. LDA modeling revealed a latent topic associated with HGSOC samples, containing bacteria Escherichia/Shigella and Corynebacterineae. Pathway analysis using KEGG databases suggest differences in several biologic pathways including oocyte meiosis, aldosterone-regulated sodium reabsorption, gastric acid secretion, and long-term potentiation. These findings support the hypothesis that bacterial communities in the upper female genital tract may influence the development of HGSOC by altering the local environment, with potential functional implications between HGSOC and normal controls. However, further validation is required to confirms these associations and determine mechanistic relevance. Full article
(This article belongs to the Section Molecular Oncology)
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19 pages, 10865 KiB  
Article
Evaluation of Immunoprotective Activities of White Button Mushroom (Agaricus bisporus) Water Extract Against Major Pathogenic Bacteria (Aeromonas hydrophila or Vibrio fluvialis) in Goldfish (Carassius auratus)
by Shujun Sun, Jing Chen, Pan Cui, Xiaoxiao Yang, Yuhan Zheng, Zijian Ma, Yong Liu and Xiang Liu
Animals 2025, 15(15), 2257; https://doi.org/10.3390/ani15152257 (registering DOI) - 1 Aug 2025
Abstract
The white button mushroom (Agaricus bisporus) is a widely cultivated edible and medicinal mushroom, which contains various active substances, and has application value against pathogenic bacteria in aquaculture. Firstly, A. bisporus water extract (AB-WE) was prepared. Through the detection kits, it [...] Read more.
The white button mushroom (Agaricus bisporus) is a widely cultivated edible and medicinal mushroom, which contains various active substances, and has application value against pathogenic bacteria in aquaculture. Firstly, A. bisporus water extract (AB-WE) was prepared. Through the detection kits, it was found that the polysaccharide, protein, and polyphenol components of AB-WE were 9.11%, 3.3%, and 1.5%, respectively. The 246 compounds were identified in AB-WE, and the major small-molecule components included L-Isoleucine, L-Tyrosine, L-Valine, and Linoleic acid by HPLC-Q Exactive-Orbitrap-MS. Secondly, the AB-WE was evaluated for its immunological activities through dietary administration and pathogen challenge (Aeromonas hydrophila and Vibrio fluvialis) in goldfish (Carassius auratus). The results showed that the levels of immune factors of acid phosphatase (ACP), alkaline phosphatase (AKP), and lysozyme (LZM) increased (p < 0.05) in goldfish, and the relative percentage survival of AB-WE against A. hydrophila and V. fluvialis were 80.00% (p < 0.05) and 81.82% (p < 0.05), respectively. The AB-WE reduced the bacterial content in renal tissue, enhanced the phagocytic activity of leukocytes, and exhibited antioxidant and anti-inflammatory effects by reducing the expression of antioxidant-related factors and inflammatory factors. Through histopathological and immunofluorescence techniques, it was found that AB-WE maintained the integrity of visceral tissues and reduced renal tissue apoptosis and DNA damage. Therefore, AB-WE exhibits immunoprotective activity against A. hydrophila and V. fluvialis infections in fish, and holds promise as an immunotherapeutic agent against major pathogenic bacteria in aquaculture. Full article
(This article belongs to the Section Aquatic Animals)
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13 pages, 1750 KiB  
Article
Mineral-Based Synthesis of CuFe2O4 Nanoparticles via Co-Precipitation and Microwave Techniques Using Leached Copper Solutions from Mined Minerals
by Carolina Venegas Abarzúa, Mauricio J. Morel, Gabriela Sandoval-Hevia, Thangavel Kavinkumar, Natarajan Chidhambaram, Sathish Kumar Kamaraj, Nagarajan Dineshbabu and Arun Thirumurugan
Minerals 2025, 15(8), 819; https://doi.org/10.3390/min15080819 (registering DOI) - 1 Aug 2025
Abstract
Environmental sustainability and responsible resource utilization are critical global challenges. In this work, we present a sustainable and circular-economy-based approach for synthesizing CuFe2O4 nanoparticles by directly utilizing copper oxide minerals sourced from Chilean mining operations. Copper sulfate (CuSO4) [...] Read more.
Environmental sustainability and responsible resource utilization are critical global challenges. In this work, we present a sustainable and circular-economy-based approach for synthesizing CuFe2O4 nanoparticles by directly utilizing copper oxide minerals sourced from Chilean mining operations. Copper sulfate (CuSO4) was extracted from these minerals through acid leaching and used as a precursor for nanoparticle synthesis via both chemical co-precipitation and microwave-assisted methods. The influence of different precipitating agents—NaOH, Na2CO3, and NaF—was systematically evaluated. XRD and FESEM analyses revealed that NaOH produced the most phase-pure and well-dispersed nanoparticles, while NaF resulted in secondary phase formation. The microwave-assisted method further improved particle uniformity and reduced agglomeration due to rapid and homogeneous heating. Electrochemical characterization was conducted to assess the suitability of the synthesized CuFe2O4 for supercapacitor applications. Cyclic voltammetry (CV) and galvanostatic charge–discharge (GCD) measurements confirmed pseudocapacitive behavior, with a specific capacitance of up to 1000 F/g at 2 A/g. These findings highlight the potential of CuFe2O4 as a low-cost, high-performance electrode material for energy storage. This study underscores the feasibility of converting primary mined minerals into functional nanomaterials while promoting sustainable mineral valorization. The approach can be extended to other critical metals and mineral residues, including tailings, supporting the broader goals of a circular economy and environmental remediation. Full article
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16 pages, 1291 KiB  
Article
Biotechnological Potential of Weizmannia ginsengihumi in the Conversion of Xylose into Lactic Acid: A Sustainable Strategy
by Larissa Provasi Santos, Ingrid Yoshimura, Fernanda Batista de Andrade and Jonas Contiero
Fermentation 2025, 11(8), 447; https://doi.org/10.3390/fermentation11080447 (registering DOI) - 31 Jul 2025
Abstract
The aim of this study was to isolate Weizmannia spp. that produce lactic acid from xylose and use an experimental design to optimize the production of the metabolite. After isolation, the experiments were conducted in xylose-yeast extract-peptone medium. The identification of isolates was [...] Read more.
The aim of this study was to isolate Weizmannia spp. that produce lactic acid from xylose and use an experimental design to optimize the production of the metabolite. After isolation, the experiments were conducted in xylose-yeast extract-peptone medium. The identification of isolates was performed using the 16S rDNA PCR technique, followed by sequencing. A central composite rotatable design (CCRD) was used to optimize the concentrations of the carbon source (xylose), nitrogen source (yeast extract and peptone), and sodium acetate. Two strains were considered promising for lactic acid production, with W. coagulans BLMI achieving greater lactic acid production under anaerobic conditions (21.93 ± 0.9 g.L−1) and a yield of 69.18 %, while the strain W. ginsengihumi BMI was able to produce 19.79 ± 0.8 g.L−1, with a yield of 70.46 %. CCRD was used with the W. ginsengihumi strain due to the lack of records in the literature on its use for lactic acid production. The carbon and nitrogen sources influenced the response, but the interactions of the variables were nonsignificant (p < 0.05). The response surface analysis indicated that the optimal concentrations of carbon and nitrogen sources were 32.5 and 3.0 g.L−1, respectively, without the need to add sodium acetate to the culture medium, leading to the production of 20.02 ± 0.19 g.L−1, productivity of 0.55 g/L/h after 36 hours of fermentation, and a residual sugar concentration of 12.59 ± 0.51 g.L−1. These results demonstrate the potential of W. ginsengihumi BMI for the production of lactic acid by xylose fermentation since it is carried out at 50 °C, indicating a path for future studies Full article
16 pages, 4964 KiB  
Article
Setting Up a “Green” Extraction Protocol for Bioactive Compounds in Buckwheat Husk
by Anna R. Speranza, Francesca G. Ghidotti, Alberto Barbiroli, Alessio Scarafoni, Sara Limbo and Stefania Iametti
Int. J. Mol. Sci. 2025, 26(15), 7407; https://doi.org/10.3390/ijms26157407 (registering DOI) - 31 Jul 2025
Abstract
Buckwheat, a gluten-free pseudocereal, is rich in dietary fiber, minerals, high-quality proteins, vitamins, and essential amino acids. Buckwheat husk, a by-product of dehulling, contains high levels of bioactive compounds such as polyphenols and dietary fibers. This study compares green extraction methods (ultrasound-assisted extraction, [...] Read more.
Buckwheat, a gluten-free pseudocereal, is rich in dietary fiber, minerals, high-quality proteins, vitamins, and essential amino acids. Buckwheat husk, a by-product of dehulling, contains high levels of bioactive compounds such as polyphenols and dietary fibers. This study compares green extraction methods (ultrasound-assisted extraction, UAE; and microwave-assisted extraction, MAE) for recovering polyphenols from buckwheat husk. MAE improved polyphenol yield by 43.6% compared to conventional acidified methanol extraction. Structural and chemical analyses of the residual husk material using SEM, FTIR, and fiber analysis revealed that MAE alters husk properties, enhancing polyphenol accessibility. Thus, MAE appears an efficient and sustainable alternative to acid- and solvent-based extraction techniques. Extracts obtained via “green” methods retained strong antioxidant activity and showed significant modulation of inflammatory markers in human Caco-2 cells, highlighting the potential use of “green” buckwheat husk extracts for food and pharma applications. This work supports the valorization of buckwheat husk within a circular economy framework, promoting buckwheat husk as a valuable raw material for bioactive compound recovery in diverse applications. Full article
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37 pages, 2065 KiB  
Review
Research Activities on Acid Mine Drainage Treatment in South Africa (1998–2025): Trends, Challenges, Bibliometric Analysis and Future Directions
by Tumelo M. Mogashane, Johannes P. Maree, Lebohang Mokoena and James Tshilongo
Water 2025, 17(15), 2286; https://doi.org/10.3390/w17152286 (registering DOI) - 31 Jul 2025
Abstract
Acid mine drainage (AMD) remains a critical environmental challenge in South Africa due to its severe impact on water quality, ecosystems and public health. Numerous studies on AMD management, treatment and resource recovery have been conducted over the past 20 years. This study [...] Read more.
Acid mine drainage (AMD) remains a critical environmental challenge in South Africa due to its severe impact on water quality, ecosystems and public health. Numerous studies on AMD management, treatment and resource recovery have been conducted over the past 20 years. This study presents a comprehensive review of research activities on AMD in South Africa from 1998 to 2025, highlighting key trends, emerging challenges and future directions. The study reveals a significant focus on passive and active treatment methods, environmental remediation and the recovery of valuable resources, such as iron, rare earth elements (REEs) and gypsum. A bibliometric analysis was conducted to identify the most influential studies and thematic research areas over the years. Bibliometric tools (Biblioshiny and VOSviewer) were used to analyse the data that was extracted from the PubMed database. The findings indicate that research production has increased significantly over time, with substantial contributions from top academics and institutions. Advanced treatment technologies, the use of artificial intelligence and circular economy strategies for resource recovery are among the new research prospects identified in this study. Despite substantial progress, persistent challenges, such as scalability, economic viability and policy implementation, remain. Furthermore, few technologies have moved beyond pilot-scale implementation, underscoring the need for greater investment in field-scale research and technology transfer. This study recommends stronger industry–academic collaboration, the development of standardised treatment protocols and enhanced government policy support to facilitate sustainable AMD management. The study emphasises the necessity of data-driven approaches, sustainable technology and interdisciplinary cooperation to address AMD’s socioeconomic and environmental effects in the ensuing decades. Full article
16 pages, 4054 KiB  
Article
Uncovering Fibrocapsa japonica (Raphidophyceae) in South America: First Taxonomic and Toxicological Insights from Argentinean Coastal Waters
by Delfina Aguiar Juárez, Inés Sunesen, Ana Flores-Leñero, Luis Norambuena, Bernd Krock, Gonzalo Fuenzalida and Jorge I. Mardones
Toxins 2025, 17(8), 386; https://doi.org/10.3390/toxins17080386 (registering DOI) - 31 Jul 2025
Abstract
Fibrocapsa japonica (Raphidophyceae) is a cosmopolitan species frequently associated with harmful algal blooms (HABs) and fish mortality events, representing a potential threat to aquaculture and coastal ecosystems. This study provides the first comprehensive morphological, phylogenetic, pigmentary, and toxicological characterization of F. japonica strains [...] Read more.
Fibrocapsa japonica (Raphidophyceae) is a cosmopolitan species frequently associated with harmful algal blooms (HABs) and fish mortality events, representing a potential threat to aquaculture and coastal ecosystems. This study provides the first comprehensive morphological, phylogenetic, pigmentary, and toxicological characterization of F. japonica strains isolated from Argentina. Light and transmission electron microscopy confirmed key diagnostic features of the species, including anterior flagella and the conspicuous group of mucocyst in the posterior region. Phylogenetic analysis based on the LSU rDNA D1–D2 region revealed monophyletic relationships with strains from geographically distant regions. Pigment analysis by HPLC identified chlorophyll-a (62.3 pg cell−1) and fucoxanthin (38.4 pg cell−1) as the main dominant pigments. Cytotoxicity assays using RTgill-W1 cells exposed for 2 h to culture supernatants and intracellular extracts showed strain-specific effects. The most toxic strain (LPCc049) reduced gill cell viability down to 53% in the supernatant exposure, while LC50 values ranged from 1.6 × 104 to 4.7 × 105 cells mL−1, depending directly on the strain and treatment type. No brevetoxins (PbTx-1, -2, -3, -6, -7, -8, -9, -10, BTX-B1 and BTX-B2) were detected by LC–MS/MS, suggesting that the cytotoxicity may be linked to the production of reactive oxygen species (ROS), polyunsaturated fatty acids (PUFAs), or hemolytic compounds, as previously hypothesized in the literature. These findings offer novel insights into the toxic potential of F. japonica in South America and underscore the need for further research to elucidate the mechanisms underlying its ichthyotoxic effect. Full article
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23 pages, 5351 KiB  
Article
Hydrometallurgical Leaching of Copper and Cobalt from a Copper–Cobalt Ore by Aqueous Choline Chloride-Based Deep Eutectic Solvent Solutions
by Emmanuel Anuoluwapo Oke, Yorkabel Fedai and Johannes Hermanus Potgieter
Minerals 2025, 15(8), 815; https://doi.org/10.3390/min15080815 (registering DOI) - 31 Jul 2025
Abstract
The sustainable recovery of valuable metals such as Cu and Co from ores is a pressing need considering environmental and economic challenges. Therefore, this study evaluates the effectiveness of deep eutectic solvents (DESs) as alternative leaching agents for Cu and Co extraction. Four [...] Read more.
The sustainable recovery of valuable metals such as Cu and Co from ores is a pressing need considering environmental and economic challenges. Therefore, this study evaluates the effectiveness of deep eutectic solvents (DESs) as alternative leaching agents for Cu and Co extraction. Four DESs were prepared using choline chloride (ChCl) as a hydrogen bond acceptor (HBA) and oxalic acid (OA), ethylene glycol (EG), urea (U) and thiourea (TU) as hydrogen bond donors (HBDs). Leaching experiments were conducted with DESs supplemented with 30 wt.% water at varying temperatures, various solid-to-liquid ratios, and time durations. The ChCl:OA DES demonstrated the highest leaching efficiencies among the DESs tested on pure CuO and CoO, achieving 89.2% for Cu and 92.4% for Co (60 °C, 400 rpm, 6 h, −75 + 53 µm particle size, and 1:10 solid-to-liquid ratio). In addition, the dissolution kinetics, analysed using the shrinking core model (SCM), showed that the leaching process was mainly controlled by surface chemical reactions. The activation energy values for Cu and Co leaching were 46.8 kJ mol−1 and 51.4 kJ mol−1, respectively, supporting a surface chemical control mechanism. The results highlight the potential of ChCl:OA as a sustainable alternative for metal recovery. Full article
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16 pages, 4530 KiB  
Article
A Novel Selective Oxygen Pressure Leaching for Zinc Extraction from Hemimorphite in Acid-Free Solutions
by Tong Wang, Yubo Zeng, Shuang Zhang, Chen Chen, Yang Li, Wenhui Ma and Hongwei Ni
Metals 2025, 15(8), 858; https://doi.org/10.3390/met15080858 (registering DOI) - 31 Jul 2025
Abstract
A novel acid-free oxygen pressure leaching for the extraction of zinc from hemimorphite was proposed in this study. Green vitriol (FeSO4·7H2O), as one of the important industrial by-products, was used as the leaching reagent to separate zinc from silicon [...] Read more.
A novel acid-free oxygen pressure leaching for the extraction of zinc from hemimorphite was proposed in this study. Green vitriol (FeSO4·7H2O), as one of the important industrial by-products, was used as the leaching reagent to separate zinc from silicon and iron. The effect of leaching conditions, including Fe/Zn molar ratio, leaching temperature, pressure, and reaction time, on the leaching efficiency of zinc, Fe, and Si was investigated systematically. The results showed that the molar ratio of Fe/Zn and leaching temperature play a pivotal role in determining the leaching efficiency rate of Zn. Under the optimized leaching conditions (Fe/Zn molar ratio = 6:1, 150 °C, 1.8 × 106 Pa, and leaching time of 2 h), the leaching efficiency of Zn reached 98.80% and the leaching efficiencies of Fe and Si were 0.76% and 16.80%, respectively. In addition, the shrinking core model was established to represent the relationship between the rate control step and the leaching conditions. The leaching process was controlled by chemical reaction and diffusion, and the activation energy of the leaching process is 97.14 kJ/mol. Full article
(This article belongs to the Special Issue Separation, Reduction, and Metal Recovery in Slag Metallurgy)
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21 pages, 932 KiB  
Article
Investigating Roasted Açaí (Euterpe oleracea) Seed Powder as a Coffee Substitute: Effects of Water Temperature, Milk Addition, and In Vitro Digestion on Phenolic Content and Antioxidant Capacity
by Rayssa Cruz Lima, Carini Aparecida Lelis, Jelmir Craveiro de Andrade and Carlos Adam Conte-Junior
Foods 2025, 14(15), 2696; https://doi.org/10.3390/foods14152696 (registering DOI) - 31 Jul 2025
Abstract
Açaí (Euterpe oleracea) seeds account for up to 95% of the fruit’s weight and are commonly discarded during pulp processing. Roasted açaí seed extract (RASE) has recently emerged as a caffeine-free coffee substitute, although its composition and functionality remain underexplored. This [...] Read more.
Açaí (Euterpe oleracea) seeds account for up to 95% of the fruit’s weight and are commonly discarded during pulp processing. Roasted açaí seed extract (RASE) has recently emerged as a caffeine-free coffee substitute, although its composition and functionality remain underexplored. This study characterized commercial açaí seed powder and evaluated the effect of temperature on the recovery of total phenolic content (TPC) in the aqueous extract using a Central Composite Rotatable Design (CCRD). An intermediate extraction condition (6.0 ± 0.5 g 100 mL−1 at 100 °C) was selected, resulting in 21.78 mg GAE/g TPC, 36.23 mg QE/g total flavonoids, and notable antioxidant capacity (FRAP: 183.33 µmol TE/g; DPPH: 23.06 mg TE/g; ABTS: 51.63 mg TE/g; ORAC: 31.46 µmol TE/g). Proton Nuclear Magnetic Resonance (1H NMR) analysis suggested the presence of amino acids, carbohydrates, and organic acids. During in vitro digestion, TPC decreased from 54.31 to 17.48 mg GAE 100 mL−1 when RASE was combined with goat milk. However, higher bioaccessibility was observed with skimmed (33%) and semi-skimmed (35%) cow milk. These findings highlight RASE as a phenolic-rich, antioxidant beverage with functional stability when prepared with boiling water. This is the first study to report the phytochemical profile of RASE and its interactions with different milk types, supporting its potential as a coffee alternative. Full article
(This article belongs to the Special Issue Fruit By-Products and Their Applications in Food Industry)
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17 pages, 6856 KiB  
Article
Selection of Optimal Parameters for Chemical Well Treatment During In Situ Leaching of Uranium Ores
by Kuanysh Togizov, Zhiger Kenzhetaev, Akerke Muzapparova, Shyngyskhan Bainiyazov, Diar Raushanbek and Yuliya Yaremkiv
Minerals 2025, 15(8), 811; https://doi.org/10.3390/min15080811 (registering DOI) - 31 Jul 2025
Abstract
The aim of this study was to improve the efficiency of in situ uranium leaching by developing a specialized methodology for selecting rational parameters for the chemical treatment of production wells. This approach was designed to enhance the filtration properties of ores and [...] Read more.
The aim of this study was to improve the efficiency of in situ uranium leaching by developing a specialized methodology for selecting rational parameters for the chemical treatment of production wells. This approach was designed to enhance the filtration properties of ores and extend the uninterrupted operation period of wells, considering the clay content of the productive horizon, the geological characteristics of the ore-bearing layer, and the composition of precipitation-forming materials. The mineralogical characteristics of ore and precipitate samples formed during the in situ leaching of uranium under various mining and geological conditions at a uranium deposit in the Syrdarya depression were identified using an X-ray diffraction analysis. It was established that ores of the Santonian stage are relatively homogeneous and consist mainly of quartz. During well operation, the precipitates formed are predominantly gypsum, which has little impact on the filtration properties of the ore. Ores of the Maastrichtian stage are less homogeneous and mainly composed of quartz and smectite, with minor amounts of potassium feldspar and kaolinite. The leaching of these ores results in the formation of gypsum with quartz impurities, which gradually reduces the filtration properties of the ore. Ores of the Campanian stage are heterogeneous, consisting mainly of quartz with varying proportions of clay minerals and gypsum. The leaching of these ores generates a variety of precipitates that significantly reduce the filtration properties of the productive horizon. Effective compositions and concentrations of decolmatant (clog removal) solutions were selected under laboratory conditions using a specially developed methodology and a TESCAN MIRA scanning electron microscope. Based on a scanning electron microscope analysis of the samples, the effectiveness of a decolmatizing solution based on hydrochloric and hydrofluoric acids (taking into account the concentration of the acids in the solution) was established for the destruction of precipitate formation during the in situ leaching of uranium. Geological blocks were ranked by their clay content to select rational parameters of decolmatant solutions for the efficient enhancement of ore filtration properties and the prevention of precipitation formation. Pilot-scale testing of the selected decolmatant parameters under various mining and geological conditions allowed the optimal chemical treatment parameters to be determined based on the clay content and the composition of precipitates in the productive horizon. An analysis of pilot well trials using the new approach showed an increase in the uninterrupted operational period of wells by 30%–40% under average mineral acid concentrations and by 25%–45% under maximum concentrations with surfactant additives in complex geological settings. As a result, an effective methodology for ranking geological blocks based on their ore clay content and precipitate composition was developed to determine the rational parameters of decolmatant solutions, enabling a maximized filtration performance and an extended well service life. This makes it possible to reduce the operating costs of extraction, control the geotechnological parameters of uranium well mining, and improve the efficiency of the in situ leaching of uranium under complex mining and geological conditions. Additionally, the approach increases the environmental and operational safety during uranium ore leaching intensification. Full article
(This article belongs to the Section Mineral Processing and Extractive Metallurgy)
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15 pages, 1273 KiB  
Article
Fungal Pretreatment of Alperujo for Bioproduct Recovery and Detoxification: Comparison of Two White Rot Fungi
by Viviana Benavides, Gustavo Ciudad, Fernanda Pinto-Ibieta, Elisabet Aranda, Victor Ramos-Muñoz, Maria A. Rao and Antonio Serrano
Agronomy 2025, 15(8), 1851; https://doi.org/10.3390/agronomy15081851 - 31 Jul 2025
Abstract
Alperujo, a solid by-product from the two-phase olive oil extraction process, poses significant environmental challenges due to its high organic load, phytotoxicity, and phenolic content. At the same time, it represents a promising feedstock for recovering value-added compounds such as phenols and volatile [...] Read more.
Alperujo, a solid by-product from the two-phase olive oil extraction process, poses significant environmental challenges due to its high organic load, phytotoxicity, and phenolic content. At the same time, it represents a promising feedstock for recovering value-added compounds such as phenols and volatile fatty acids (VFAs). When used as a substrate for white rot fungi (WRF), it also produces ligninolytic enzymes. This study explores the use of two native WRF, Anthracophyllum discolor and Stereum hirsutum, for the biotransformation of alperujo under solid-state fermentation conditions, with and without supplementation of copper and manganese, two cofactors known to enhance fungal enzymatic activity. S. hirsutum stood out for its ability to release high concentrations of phenolic compounds (up to 6001 ± 236 mg gallic acid eq L−1) and VFAs (up to 1627 ± 325 mg L−1) into the aqueous extract, particularly with metal supplementation. In contrast, A. discolor was more effective in degrading phenolic compounds within the solid matrix, achieving a 41% reduction over a 30-day period. However, its ability to accumulate phenolics and VFAs in the extract was limited. Both WRF exhibited increased enzymatic activities (particularly Laccase and Manganese Peroxidase) with the addition of Cu-Mn, highlighting the potential of the aqueous extract as a natural source of biocatalysts. Phytotoxicity assays using Solanum lycopersicum seeds confirmed a partial detoxification of the treated alperujo. However, none of the fungi could entirely eliminate inhibitory effects on their own, suggesting the need for complementary stabilization steps before agricultural reuse. Overall, the results indicate that S. hirsutum, especially when combined with metal supplementation, is better suited for valorizing alperujo through the recovery of bioactive compounds. Meanwhile, A. discolor may be more suitable for detoxifying the solid phase strategies. These findings support the integration of fungal pretreatment into biorefinery schemes that valorize agroindustrial residues while mitigating environmental issues. Full article
(This article belongs to the Section Agricultural Biosystem and Biological Engineering)
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38 pages, 2064 KiB  
Systematic Review
Humulus lupulus (Hop)-Derived Chemical Compounds Present Antiproliferative Activity on Various Cancer Cell Types: A Meta-Regression Based Panoramic Meta-Analysis
by Georgios Tsionkis, Elisavet M. Andronidou, Panagiota I. Kontou, Ioannis A. Tamposis, Konstantinos Tegopoulos, Panagiotis Pergantas, Maria E. Grigoriou, George Skavdis, Pantelis G. Bagos and Georgia G. Braliou
Pharmaceuticals 2025, 18(8), 1139; https://doi.org/10.3390/ph18081139 - 31 Jul 2025
Abstract
Background/Objectives: Humulus lupulus (hops) are a perennial, dioecious plant widely cultivated for beer production, used for their distinguishing aroma and bitterness—traits that confer high added value status. Various hop-derived compounds have been reported to exhibit antioxidant, antimicrobial, antiproliferative and other bioactive effects. [...] Read more.
Background/Objectives: Humulus lupulus (hops) are a perennial, dioecious plant widely cultivated for beer production, used for their distinguishing aroma and bitterness—traits that confer high added value status. Various hop-derived compounds have been reported to exhibit antioxidant, antimicrobial, antiproliferative and other bioactive effects. This systematic review and meta-analysis assesses the impact of hop compounds on the viability of diverse cancer cell lines. Methods: A comprehensive literature search was performed following PRISMA guidelines. Data were synthesized via multivariate meta-analysis and meta-regression, using IC50 values as the effect size. Key variables included assay type (SRB, tetrazolium salt-based, crystal violet), exposure duration (24, 48, 72 h), specific hop compound and cancer cell line. Results: Of 622 articles identified, 61 met eligibility criteria, yielding 354 individual experiments. Meta-regression of xanthohumol (XN) IC50 values across SRB, tetrazolium and crystal violet assays revealed no statistically significant differences at 24 h (p = 0.77), 48 h (p = 0.35) and 72 h (p = 0.70), supporting the interchangeability of the methods. Meta-analysis confirmed that hop constituents inhibit cancer cell proliferation; XN emerged as the most potent flavonoid (IC50 = 16.89 μM at 72 h), while lupulone was the strongest compound overall (IC50 = 5.00 μM at 72 h). Crude hop extracts demonstrated greater antiproliferative selectivity for cancer versus non-cancer cells (IC50 = 35.23 vs. 43.80 μg/mL at 72 h). Conclusions: Hop compounds, and particularly bitter acids, demonstrate promising antiproliferative activity against cancer cells with comparatively low toxicity to healthy cells. Furthermore, our analysis confirms the comparability of SRB, tetrazolium-based and crystal violet assays, supporting the robust integration of antiproliferative data. Full article
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28 pages, 2898 KiB  
Review
Chemical Composition and Biological Activities of Pelargonium sp.: A Review with In Silico Insights into Potential Anti-Inflammatory Mechanism
by Diana Celi, Karina Jimenes-Vargas, António Machado, José Miguel Álvarez-Suárez and Eduardo Tejera
Molecules 2025, 30(15), 3198; https://doi.org/10.3390/molecules30153198 (registering DOI) - 30 Jul 2025
Abstract
The Pelargonium genus, encompassing over 280 species, remains markedly underexplored despite extensive traditional use for respiratory, gastrointestinal, and dermatological disorders. This review of aqueous, alcoholic, and hydroalcoholic extracts reveals critical research gaps: only 10 species have undergone chemical characterization, while 17 have been [...] Read more.
The Pelargonium genus, encompassing over 280 species, remains markedly underexplored despite extensive traditional use for respiratory, gastrointestinal, and dermatological disorders. This review of aqueous, alcoholic, and hydroalcoholic extracts reveals critical research gaps: only 10 species have undergone chemical characterization, while 17 have been evaluated for biological activities. Phytochemical analysis identified 252 unique molecules across all studies, with flavonoids emerging as the predominant class (n = 108). Glycosylated derivatives demonstrated superior bioactivity profiles compared to non-glycosylated analogs. Phenolic acids (n = 43) and coumarins (n = 31) represented additional major classes. Experimental studies primarily documented antioxidant, antibacterial, and anti-inflammatory effects, with emerging evidence for antidiabetic, anticancer, and hepatoprotective activities. However, methodological heterogeneity across studies limits comparative analysis and comprehensive understanding. In silico target prediction analysis was performed on 197 high-confidence molecular structures. Glycosylated flavonols, anthocyanidins, flavones, and coumarins showed strong predicted interactions with key inflammatory targets (ALOX15, ALOX5, PTGER4, and NOS2) and metabolic regulators (GSK3A and PI4KB), providing mechanistic support for observed therapeutic effects and suggesting potential applications in chronic inflammatory and metabolic diseases. These findings underscore the substantial therapeutic potential of underexplored Pelargonium species and advocate for systematic research employing untargeted metabolomics, standardized bioassays, and compound-specific mechanistic validation to fully unlock the pharmacological potential of this diverse genus. Full article
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16 pages, 3327 KiB  
Article
Development and Evaluation of Selenium-Enriched Compound Fertilizers for Remediation of Mercury-Contaminated Agricultural Soil
by Yuxin Li, Guangpeng Pei, Yanda Zhang, Shuyun Guan, Yingzhong Lv, Zhuo Li and Hua Li
Agronomy 2025, 15(8), 1842; https://doi.org/10.3390/agronomy15081842 - 30 Jul 2025
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Abstract
Agricultural soil contaminated with mercury (Hg) poses a serious threat to ecosystems and human health. Although adding an appropriate amount of selenium (Se) can reduce the toxicity and mobility of Hg in soil, Se alone is prone to leaching into groundwater through soil [...] Read more.
Agricultural soil contaminated with mercury (Hg) poses a serious threat to ecosystems and human health. Although adding an appropriate amount of selenium (Se) can reduce the toxicity and mobility of Hg in soil, Se alone is prone to leaching into groundwater through soil runoff. Therefore, Se-enriched compound fertilizers were developed, and their remediation effect on Hg-contaminated agricultural soil was determined. The Se-enriched compound fertilizers were prepared by combining an organic fertilizer (vinegar residue, biochar, and potassium humate), inorganic fertilizer (urea, KH2PO4, ZnSO4, and Na2SeO3), and a binder (attapulgite and bentonite). A material proportioning experiment showed that the optimal granulation rate, organic matter content, and compressive strength were achieved when using 15% attapulgite (Formulation 1) and 10% bentonite (Formulation 2). An analysis of Se-enriched compound fertilizer particles showed that the two Se-enriched compound fertilizers complied with the standard for organic–inorganic compound fertilizers (China GB 18877-2002). Compared with the control, Formulation 1 and Formulation 2 significantly reduced the Hg content in bulk and rhizosphere soil following diethylenetriaminepentaacetic acid (DTPA) extraction by 40.1–47.3% and 53.8–56.0%, respectively. They also significantly reduced the Hg content in maize seedling roots and shoots by 26.4–29.0% and 57.3–58.7%, respectively, effectively limiting Hg uptake, transport, and enrichment. Under the Formulation 1 and Formulation 2 treatments, the total and DTPA-extractable Se contents in soil and maize seedlings were significantly increased. This study demonstrated that Se-enriched compound fertilizer effectively remediates Hg-contaminated agricultural soil and can promote the uptake of Se by maize. The results of this study are expected to positively contribute to the sustainable development of the agro-ecological environment. Full article
(This article belongs to the Section Innovative Cropping Systems)
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