Search Results (663)

Cadmium (Cd) pollution poses a serious threat to freshwater ecosystems. The freshwater mussel Anodonta woodiana is increasingly used as a bioindicator for monitoring Cd pollution in aquatic environments. However, the primary routes of Cd accumulation in A. woodiana remain unclear, and the molecular regulatory mechanisms underlying Cd accumulation are poorly understood. To address these gaps, this study employed a novel stable isotope dual-tracer technique to trace Cd from water (waterborne ¹¹²Cd) and the green alga Chlorella vulgaris (dietary ¹¹³Cd) during the simultaneous exposure experiment. Comparative transcriptomic analysis was then conducted to characterize molecular responses in A. woodiana following Cd exposure. The results showed that although newly accumulated ¹¹²Cd and ¹¹³Cd increased with exposure concentration and duration, the relative importance of ¹¹²Cd (91.6 ± 2.8%) was significantly higher than that of ¹¹³Cd (8.4 ± 2.8%) (p < 0.05). Cd exposure induced differentially expressed genes primarily enriched in the metabolic processes, cellular processes, and/or the ubiquitin-mediated proteolysis pathway. Within the ubiquitin-mediated proteolysis pathway, TRIP12 (E3 ubiquitin-protein ligase TRIP12) and Cul5 (cullin-5) were significantly upregulated. The findings will provide critical insights for interpreting Cd biomonitoring data in freshwater environments using mussels as bioindicators. Full article

Climate change is jeopardizing global food security, with at least 713 million people facing hunger. To face this challenge, legumes as common beans could offer a nature-based solution, sourcing nutrients and dietary fiber, especially for rural communities in Latin America and Africa. However, since common beans are generally heat and drought susceptible, it is imperative to speed up their molecular introgressive adaptive breeding so that they can be cultivated in regions affected by extreme weather. Therefore, this study aimed to couple an advanced panel of common bean (Phaseolus vulgaris L.) × tolerant Tepary bean (P. acutifolius A. Gray) interspecific lines with Bayesian regression algorithms to forecast adaptation to the humid and dry sub-regions at the Caribbean coast of Colombia, where the common bean typically exhibits maladaptation to extreme heat waves. A total of 87 advanced lines with hybrid ancestries were successfully bred, surpassing the interspecific incompatibilities. This hybrid panel was genotyped by sequencing (GBS), leading to the discovery of 15,645 single-nucleotide polymorphism (SNP) markers. Three yield components (yield per plant, and number of seeds and pods) and two biomass variables (vegetative and seed biomass) were recorded for each genotype and inputted in several Bayesian regression models to identify the top genotypes with the best genetic breeding values across three localities on the Colombian coast. We comparatively analyzed several regression approaches, and the model with the best performance for all traits and localities was BayesC. Also, we compared the utilization of all markers and only those determined as associated by a priori genome-wide association studies (GWAS) models. Better prediction ability with the complete SNP set was indicative of missing heritability as part of GWAS reconstructions. Furthermore, optimal SNP sets per trait and locality were determined as per the top 500 most explicative markers according to their β regression effects. These 500 SNPs, on average, overlapped in 5.24% across localities, which reinforced the locality-dependent nature of polygenic adaptation. Finally, we retrieved the genomic estimated breeding values (GEBVs) and selected the top 10 genotypes for each trait and locality as part of a recommendation scheme targeting narrow adaption in the Caribbean. After validation in field conditions and for screening stability, candidate genotypes and SNPs may be used in further introgressive breeding cycles for adaptation. Full article

Background/Objectives: Acne vulgaris is a widespread, chronic inflammatory skin condition that significantly impacts patients’ quality of life. Although oral isotretinoin remains the most effective treatment, recent evidence suggests that H₁-antihistamines such as desloratadine and levocetirizine may enhance acne therapy. This study assesses whether combining H₁-antihistamines to isotretinoin enhances treatment efficacy in acne vulgaris compared to isotretinoin alone. Methods: Our analysis included 10 randomized controlled trials involving 675 patients collectively, predominantly from Asia and the Middle East. Data were extracted by two independent reviewers, with discrepancies resolved by a third. Risk of bias was assessed using the Cochrane RoB 2 tool. Analyses were performed using RevMan 5.4 with random-effects models, and heterogeneity was evaluated via I² and Q tests. Sensitivity analyses were conducted to assess result robustness. Results: Combination therapy with isotretinoin and desloratadine showed a significantly greater reduction in GAGS (Global Acne Grading Scale) score by week 12 (p < 0.00001; MD 2.68, 95% CI 1.60 to 3.75; I² = 0%) while earlier timepoints showed non-significant or borderline results. For inflammatory lesions, significant improvements with desloratadine emerged at weeks 4, 8, and 12 after excluding an influential outlier, with low heterogeneity and consistent direction of effect. Non-inflammatory lesions did not differ significantly at weeks 4 or 8. At week 12, a significant reduction was seen in the desloratadine subgroup (OR 2.61, p = 0.003, I² = 11%) and in overall pooled analysis (OR 2.77, p < 0.0001, I² = 2%). Among side effects, acne flare-ups, pruritus, and cheilitis were significantly reduced in the desloratadine group, as well as in pooled analysis. Xerosis did not consistently differ between groups. Overall, desloratadine improved tolerability and reduced mucocutaneous adverse events more than levocetirizine. Conclusions: Current evidence suggests that combining oral antihistamines with isotretinoin may offer therapeutic benefits in acne management, particularly in enhancing tolerability and potentially improving clinical outcomes, as reflected by significant reductions in GAGS scores and mucocutaneous adverse effects such as cheilitis, pruritus, and acne flare-ups. Full article

Native bean genotypes (Phaseolus vulgaris L.) play a crucial role in ensuring food security in the Andean region. However, their cultivation faces challenges, such as low yields and a high dependence on nitrogen fertilizers. Addressing these issues requires the development of sustainable strategies to enhance productivity. This study evaluated the interaction between Rhizobium phaseoli inoculation and three levels of phosphorus (P) and potassium (K) fertilization on the growth, yield, and nutritional profile of the ‘Tiachos bayo’ native bean variety under Andean field conditions. Two R. phaseoli strains (UNC-1 and CIAT-2) were tested in combination with three levels of chemical fertilization (0%, 50%, and 100%) using a factorial design under field conditions. Parameters assessed included nodule number, plant height, phenology, yield, and proximal grain composition. Results indicated that inoculation and fertilization levels significantly influenced nodulation, phenological phases, and crop yield. The highest yield (2172 kg·ha⁻¹) and nodule number (78) were observed with the combined treatment of R. phaseoli CIAT-2 strain with 100% fertilization. It was concluded that R. phaseoli inoculation, when integrated with appropriate fertilization, enhances the productivity of native beans. Full article

This study examined the eco-friendly synthesis of zinc oxide (ZnO) nanoparticles using Cladophora glomerata extracts as reducing and stabilizing agents, comparing zinc acetate and zinc chloride precursors for biomedical and environmental applications. Zinc acetate-synthesized ZnO nanoparticles showed a significant absorption peak around 320–330 nm, indicating stable, quasi-spherical ZnO nanoparticles with a narrow size distribution, primarily around 100 nm. Zeta potential measurements revealed a value of −25 mV for these particles, suggesting moderate colloidal stability. XRD analysis confirmed a highly crystalline hexagonal wurtzite structure for zinc acetate-derived ZnO, and SEM images supported a proper microstructure with approximately 2 µm particle size. FTIR analysis indicated higher-quality ZnO from zinc acetate due to the absence of moisture and hydroxyl groups. Conversely, zinc chloride-derived ZnO particles displayed a broader absorption spectrum around 370 nm, indicative of significant aggregation. Their narrower zeta potential distribution around +10 mV suggested diminished colloidal stability and a heightened aggregation tendency. While a peak around 100 nm was observed, many particles exceeded 1000 nm, reaching up to 10,000 nm. XRD results showed that zinc chloride adversely affected crystallinity, and SEM analysis indicated smaller particles (approx. 1 µm). FTIR analysis demonstrated that zinc chloride samples retained hydroxyl groups. Both zinc acetate- and zinc chloride-derived ZnO nanoparticles produced notable inhibitory zones against Gram-positive (L. monocytogenes, S. aureus) and specific Gram-negative bacteria (E. coli, K. pneumoniae). Zinc acetate-derived ZnO showed a 21 mm inhibitory zone against P. vulgaris, while zinc chloride-derived ZnO showed a 10.1 mm inhibitory zone against C. albicans. Notably, zinc chloride-derived ZnO exhibited broad-spectrum antimicrobial activity. MIC readings indicated that zinc acetate-derived ZnO had better antibacterial properties at lower concentrations, such as 3.125 µg/mL against L. monocytogenes. These findings emphasize that the precursor material selection critically influences particle characteristics, including optical properties, surface charge, and colloidal stability. Full article

Seed vigor testing traditionally requires large sample sizes and extended durations. The biospeckle laser (BSL) technique offers a faster, image-based alternative for seed analysis though the standardization of set protocols. This study evaluated the efficiency of local and global BSL analyses in bean seeds (Phaseolus vulgaris L.). Two groups of seeds (872 in total) were classified into high- and low-vigor seeds using the emergence test over 800 samples. The BSL test was then applied to 72 seeds (36 per group), analyzing biological activity locally (vascular and embryonic areas) and globally (whole image). BSL analysis detected significant differences between the groups (p < 0.05). Among the methods, the local analysis of the embryonic axis was most effective (F = 44.252, p = 0.000), showing a clearer distinction than the global analysis (F = 19.484, p = 0.000). The vascular area analysis did not yield significant results. These findings highlight the efficiency of the local BSL analysis at the embryonic axis for vigor tests compared to the global analysis. However, it was observed that the selected point in the local analysis affects the reliability of the vigor test. It was a relevant step toward standardization demanding additional tests in other species and varieties. Full article

Carbonaceous sorbents were prepared from Chlorella vulgaris via hydrothermal carbonization (200 °C and 250 °C) and slow pyrolysis (300–500 °C) to assess their effectiveness in removing the herbicide metribuzin from water. The biomass was cultivated under controlled laboratory conditions, allowing for consistent feedstock quality and traceability throughout processing. Using a single microalgal feedstock for both thermal methods enabled a direct comparison of hydrochar and pyrochar properties and performance, eliminating variability associated with different feedstocks and allowing for a clearer assessment of the influence of thermal conversion pathways. While previous studies have examined algae-derived biochars for heavy metal adsorption, comprehensive comparisons targeting organic micropollutants, such as metribuzin, remain scarce. Moreover, few works have combined kinetic and isotherm modeling to evaluate the underlying adsorption mechanisms of both hydrochars and pyrochars produced from the same algal biomass. Therefore, the materials investigated in the present work were characterized using a combination of standard physicochemical and structural techniques (FTIR, SEM, BET, pH, ash content, and TOC). The kinetics of sorption were also studied. The results show better agreement with the pseudo-second-order model, consistent with chemisorption, except for the hydrochar produced at 250 °C, where physisorption provided a more accurate fit. Freundlich isotherms better described the equilibrium data, indicating heterogeneous adsorption. The hydrochar obtained at 200 °C reached the highest adsorption capacity, attributed to its intact cell structure and abundance of surface functional groups. The pyrochar produced at 500 °C exhibited the highest surface area (44.3 m²/g) but a lower affinity for metribuzin due to the loss of polar functionalities during pyrolysis. This study presents a novel use of Chlorella vulgaris-derived carbon materials for metribuzin removal without chemical activation, which offers practical benefits, including simplified production, lower costs, and reduced chemical waste. The findings contribute to expanding the applicability of algae-based sorbents in water treatments, particularly where low-cost, energy-efficient materials are needed. This approach also supports the integration of carbon sequestration and wastewater remediation within a circular resource framework. Full article

In this paper, the production of biomass, pigments, lipids, and carbohydrates and the elimination of ammonium and orthophosphate by the microalgae Chlorella vulgaris, grown in synthetic wastewater (SWW), were studied under different light intensities (3000–10,000 lux), pH (7.5–9.5) and daily illumination time (8–16 h). The best conditions for the autotrophic culture of microalgae were predicted using response surface methodology (RSM). The results showed that the adaptation of the microalgae for this nutrient source was effective. The best conditions for the cultivation of Chlorella vulgaris in SWW were 8.44 pH and a light intensity of 8433 lux in the daily illumination time of 16 h. Under optimal conditions, the production of microalgal biomass, chlorophyll-a, chlorophyll-b, carotenoids, lipids and carbohydrates was 0.534 g/L, 7.46 mg/mL, 3.53 mg/mL, 2.01 mg/mL, 21.40% and 28.46%, respectively. The removal efficiencies of ammonium and orthophosphate from SWW were 97.66% and 58.78% in autotrophic cultures. This investigation introduces a new aspect by verifying the optimized cultivation conditions with real municipal wastewater, indicating that the procedure could be utilized for sustainable production of bioproducts and efficient treatment of municipal wastewater. Full article

Essential oils (EOs) are widely recognized for their antifungal properties, but their efficacy against specific phytopathogenic fungi associated with banana (Musa paradisiaca) rot remains underexplored. This study aimed to evaluate the antifungal potential of EOs from Origanum vulgare, Salvia rosmarinus, Syzygium aromaticum, Thymus vulgaris, Cinnamomum verum, and Ocimum basilicum against five fungal species isolated from infected banana peels. Fungal isolates were obtained using PDA medium supplemented with chloramphenicol and were purified by weekly subculturing. Morphological and microscopic characterization was complemented by molecular identification based on ITS sequencing and phylogenetic reconstruction using Neighbor-Joining and UPGMA methods in MEGA v11. In vitro and ex vivo antifungal assays were performed at EO concentrations ranging from 200 to 1000 ppm. Thyme oil exhibited the strongest inhibitory effect, with complete growth suppression at 1000 ppm. Cinnamon and oregano also demonstrated effective inhibition at 600 ppm, while clove, rosemary, and basil were markedly less effective. Statistical analysis confirmed significant effects of EO type and concentration on fungal growth (p < 0.001). Molecular results showed strong phylogenetic support for isolate identification, with bootstrap values above 93% in most clades. These findings support the selective use of specific EOs as sustainable alternatives to synthetic fungicides in the postharvest management of banana diseases and provide a molecularly supported basis for their targeted application in integrated control strategies. Full article

Proteus vulgaris is an emerging multidrug-resistant (MDR) foodborne pathogen that poses a significant threat to food safety and public health, particularly in aquaculture systems where antibiotic use may drive resistance development. Despite its increasing clinical importance, the genomic mechanisms underlying antimicrobial resistance (AMR) and virulence transmission in foodborne Proteus vulgaris remain poorly understood, representing a critical knowledge gap in One Health frameworks. To investigate its AMR and virulence transmission mechanisms, we analyzed strain P3M from Penaeus vannamei intestines through genomic island (GI) prediction and comparative genomics. Our study provides the first comprehensive characterization of mobile genetic elements in aquaculture-derived Proteus vulgaris, identifying two virulence-associated GIs (GI12/GI15 containing 25/6 virulence genes) and three AMR-linked GIs (GI7/GI13/GI16 carrying 1/1/5 antibiotic resistance genes (ARGs)), along with a potentially mobile ARG cluster flanked by IS elements (tnpA-tnpB), suggesting horizontal gene transfer capability. These findings elucidate previously undocumented genomic mechanisms of AMR and virulence dissemination in Proteus vulgaris, establishing critical insights for developing One Health strategies to combat antimicrobial resistance and virulence in foodborne pathogens. Full article

Beans (Phaseolus vulgaris and P. lunatus) are the major hosts of bean golden mosaic begomovirus (BGMV). Robust taxonomic criteria were established for Begomovirus species demarcation. However, DNA–A identities among BGMV isolates display a continuous variation (89–100%), which conflicts with the current concept of a single viral species. The diversity of 146 Brazilian isolates designated in the GenBank as BGMV was assessed by comparing their complete DNA–A sequences. The isolates were clustered into four groups, being discriminated mainly by their original Fabaceae hosts. Additional Sequence Demarcation Tool analyses indicated that BGMV-related viruses comprise two clear-cut groups: isolates reported infecting mainly P. vulgaris (identities of 96–97% to the reference NC_004042 isolate) and a group associated with P. lunatus (identities of 89–91%). Moreover, we recognized a distinct set of genomic features in the iterons and Rep-associated protein motifs across these two diversity groups. The host prevalence and genomic differences suggest that most P. lunatus isolates are currently misclassified as BGMV strains, being more likely samples of a closely related (but distinct) Begomovirus species. Hence, the implications of this BGMV diversity should be taken into consideration by classical and biotech breeding programs aiming for large-spectrum viral resistance in Phaseolus species. Full article

Urban vacant land can provide important habitat for birds, especially in cities with high concentrations of residential vacancy. Understanding which vegetation features best support urban biodiversity can inform greening strategies that benefit both wildlife and residents. This study addressed two questions: (1) How does bird species composition reflect the potential conservation value of these neighborhoods? (2) Which vegetation structures predict bird abundance across a fine-grained urban landscape? To answer these questions, we conducted avian and vegetation surveys across 100 one-hectare plots in St. Louis, Missouri, USA. These surveys showed that species richness was positively associated with canopy cover (β = 0.32, p = 0.003). Canopy cover was also the strongest predictor of American Robin (Turdus migratorius) and Northern Cardinal (Cardinalis cardinalis) abundance (β = 1.9 for both species). In contrast, impervious surfaces and abandoned buildings were associated with generalist species. European Starling (Sturnus vulgaris) abundance was strongly and positively correlated with NMS Axis 1 (r = 0.878), while Chimney Swift (Chaetura pelagica) abundance was negatively correlated (r = −0.728). These findings underscore the significance of strategic habitat management in promoting urban biodiversity and addressing ecological challenges within urban landscapes. They also emphasize the importance of integrating biodiversity goals into urban planning policies to ensure sustainable and equitable development. Full article

Background: Oral isotretinoin is an effective treatment for refractory and moderate acne unresponsive to conventional therapies, considered the most effective option for such cases. Objective: This study aimed to evaluate the knowledge, concerns, and experiences of acne patients undergoing isotretinoin treatment in Qassim, Saudi Arabia, with a focus on commonly reported adverse effects. Methods: A cross-sectional study was conducted from December 2023 to February 2024 using a self-administered questionnaire. This study targeted male and female acne vulgaris patients from the Qassim region attending the outpatient dermatology clinic at King Saud Hospital (KSH). Results: A total of 131 acne patients participated. Of these, 97.7% had heard of isotretinoin, and 92.4% were aware of its side effects. The most common sources of information were colleagues, friends, or family (37.4%), followed by previous use (26%) and healthcare professionals (24%). The most frequently reported side effect was dryness (51.9%), followed by liver function changes (24.4%) and fetal abnormalities (13%). There was a significant association between educational level and knowledge of isotretinoin’s side effects (p = 0.003) and awareness of specific side effects (p < 0.001). Conclusion: Most acne patients had sufficient knowledge of isotretinoin and its adverse effects, with dryness being the most commonly reported side effect. The primary sources of information were non-medical, highlighting the need for health education to ensure informed and safe isotretinoin use. Full article

Syringin is a phenylpropanoid glycoside isolated from the bark of Syringa vulgaris. Phillygenin is a lignan obtained mainly from the fruits and flowers of Forsythia intermedia. Both compounds have shown potent anti-inflammatory and antioxidant properties. We investigated the potential role of syringin and phillygenin in preventing lipid deposition in macrophages. Syringin and phillygenin significantly (p < 0.001) reduced lipid deposition in macrophages in a dose-dependent manner. For syringin, the greatest reduction in CD36 receptor expression was found to be over 80% (50 μg/mL) compared to the cholesterol-stimulated control (p < 0.001). Phillygenin inhibited CD36 receptor expression by approximately 25% (50 μg/mL), compared to the stimulated control (p < 0.05). For syringin, the CD36 receptor regulation pathway was PPAR-γ dependent. Phillygenin showed a statistically significant (p < 0.001) increase in the expression of the ABCA1 transporter: 2.5-fold (10 μg/mL), 3-fold (20 μg/mL) and 4-fold (50 μg/mL) compared to the cholesterol-stimulated control. Syringin did not significantly increase ABCA1 expression. For phillygenin, the activation pathway of the ABCA1 transporter was HO-1dependent. Our study showed that syringin inhibits the cholesterol-induced differentiation of macrophages into foam cells. Moreover, phillygenin increased cholesterol efflux from macrophages. Therefore, syringin and phillygenin may be valuable agents in the prevention of early and late atherosclerosis. Full article

Pyrrolizidine alkaloids are plant-derived toxins with environmental persistence and the potential to contaminate soil, water, and adjacent crops. This study investigated the leaching behavior and environmental fate of PAs from two PA-producing weeds—Myosotis arvensis L. (Boraginaceae) and Senecio vulgaris L. (Asteraceae)—in two Latvian agricultural soils: sandy loam and loam. Hot- and cold-water plant extracts were applied to soil columns (10 cm and 20 cm), and leachates were analyzed over a 14-day period using QuEChERS purification and LC-HRMS detection. Leaching varied by plant species, extract type, and soil. M. arvensis showed significantly higher cumulative leaching (77–84% for cold, 65–71% for hot extracts), attributed to the higher solubility of N-oxides. In contrast, S. vulgaris extracts leached minimally (<0.84% from sandy loam) and were undetectable in loam. The presence of cyclic diester PAs in S. vulgaris and the higher cation exchange capacity of loam favored retention or degradation. PANO-to-PA conversion occurred in both soils, indicating redox activity. The fate of PAs was influenced by structural type (diesters showing higher persistence), extraction method (hot extraction releasing more pyrrolizidine alkaloids), and soil properties such as pH, organic matter, and cation exchange capacity, which affected sorption and mobility. These findings underscore the significance of soil composition in controlling PA mobility and associated environmental risks. Future research should focus on long-term PA persistence across diverse soil types and investigate crop uptake potential and microbial degradation pathways under field conditions. Full article