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Search Results (81,587)

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21 pages, 826 KiB  
Review
The Role of Vitamin K Deficiency in Chronic Kidney Disease—A Scoping Review
by Valdemar Tybjerg Wegge, Mette Kjær Torbensen, Allan Linneberg and Julie Aaberg Lauridsen
Nutrients 2025, 17(15), 2559; https://doi.org/10.3390/nu17152559 (registering DOI) - 5 Aug 2025
Abstract
Background/objectives: Chronic kidney disease (CKD) affects up to 15% of the global population and is driven by vascular and interstitial damage, and is most prevalent in persons with hypertension and diabetes. Vitamin K, a necessary cofactor for activation of vitamin K-dependent proteins [...] Read more.
Background/objectives: Chronic kidney disease (CKD) affects up to 15% of the global population and is driven by vascular and interstitial damage, and is most prevalent in persons with hypertension and diabetes. Vitamin K, a necessary cofactor for activation of vitamin K-dependent proteins may modulate these processes. It is well established that vitamin K deficiency is associated with CKD, but the therapeutic effects of supplementation on kidney function are still uncertain. We aimed to review the current evidence on the effect of vitamin K deficiency and supplementation on any marker of renal function and kidney disease, across general adult populations and CKD patient populations. Methods: A search was conducted in PubMed, targeting terms related to vitamin K status and CKD. Studies were included if they reported data on vitamin K status or supplementation in relation to kidney function outcomes. Results: A total of 16 studies were included. Nine interventional studies were included and confirmed that vitamin K supplementation improves biomarkers of vitamin K status but showed no consistent beneficial effects on renal function. Seven observational studies across populations found significant associations between vitamin K status and decline in kidney function; however, associations were often attenuated after adjustments. Conclusions: No clear effect of supplementation was observed on the reported kidney markers in patient populations. A clear association between low vitamin K status and impaired kidney function was confirmed. Studying heterogeneity makes the comparability and generalizability of the results difficult. Our review highlights the need for more cohort studies and clinical trials in general or patient populations. Full article
20 pages, 4870 KiB  
Article
Histological and Immunohistochemical Evidence in Hypothermia-Related Death: An Experimental Study
by Emina Dervišević, Nina Čamdžić, Edina Lazović, Adis Salihbegović, Francesco Sessa, Hajrudin Spahović and Stefano D’Errico
Int. J. Mol. Sci. 2025, 26(15), 7578; https://doi.org/10.3390/ijms26157578 (registering DOI) - 5 Aug 2025
Abstract
Hypothermia-related deaths present significant diagnostic challenges due to non-specific and often inconsistent autopsy findings. This study investigated the histological and immunohistochemical alterations associated with primary and secondary hypothermia in an experimental Rattus norvegicus model, focusing on the effects of benzodiazepine and alcohol ingestion. [...] Read more.
Hypothermia-related deaths present significant diagnostic challenges due to non-specific and often inconsistent autopsy findings. This study investigated the histological and immunohistochemical alterations associated with primary and secondary hypothermia in an experimental Rattus norvegicus model, focusing on the effects of benzodiazepine and alcohol ingestion. Twenty-one male rats were divided into three groups: control (K), benzodiazepine-treated (B), and alcohol-treated (A). After two weeks of substance administration, hypothermia was induced and multiple organ samples were analyzed. Histologically, renal tissue showed hydropic and vacuolar degeneration, congestion, and acute tubular injury across all groups, with no significant differences in E-cadherin expression. Lung samples revealed congestion, emphysema, and hemorrhage, with more pronounced vascular congestion in the alcohol and benzodiazepine groups. Cardiac tissue exhibited vacuolar degeneration and protein denaturation, particularly in substance-exposed animals. The spleen showed preserved architecture but increased erythrocyte infiltration and significantly elevated myeloperoxidase (MPO)-positive granulocytes in the intoxicated groups. Liver samples demonstrated congestion, focal necrosis, and subcapsular hemorrhage, especially in the alcohol group. Immunohistochemical analysis revealed statistically significant differences in MPO expression in both lung and spleen tissues, with the highest levels observed in the benzodiazepine group. Similarly, CK7 and CK20 expression in the gastroesophageal junction was significantly elevated in both alcohol- and benzodiazepine-treated animals compared to the controls. In contrast, E-cadherin expression in the kidney did not differ significantly among the groups. These findings suggest that specific histological and immunohistochemical patterns, particularly involving pulmonary, cardiac, hepatic, and splenic tissues, may help differentiate primary hypothermia from substance-related secondary hypothermia. The study underscores the value of integrating toxicological, histological, and molecular analyses to enhance the forensic assessment of hypothermia-related fatalities. Future research should aim to validate these markers in human autopsy series and explore additional molecular indicators to refine diagnostic accuracy in forensic pathology. Full article
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25 pages, 4069 KiB  
Article
Forest Volume Estimation in Secondary Forests of the Southern Daxing’anling Mountains Using Multi-Source Remote Sensing and Machine Learning
by Penghao Ji, Wanlong Pang, Rong Su, Runhong Gao, Pengwu Zhao, Lidong Pang and Huaxia Yao
Forests 2025, 16(8), 1280; https://doi.org/10.3390/f16081280 (registering DOI) - 5 Aug 2025
Abstract
Forest volume is an important information for assessing the economic value and carbon sequestration capacity of forest resources and serves as a key indicator for energy flow and biodiversity. Although remote sensing technology is applied to estimate volume, optical remote sensing data have [...] Read more.
Forest volume is an important information for assessing the economic value and carbon sequestration capacity of forest resources and serves as a key indicator for energy flow and biodiversity. Although remote sensing technology is applied to estimate volume, optical remote sensing data have limitations in capturing forest vertical height information and may suffer from reflectance saturation. While LiDAR data can provide more detailed vertical structural information, they come with high processing costs and limited observation range. Therefore, improving the accuracy of volume estimation through multi-source data fusion has become a crucial challenge and research focus in the field of forest remote sensing. In this study, we integrated Sentinel-2 multispectral data, Resource-3 stereoscopic imagery, UAV-based LiDAR data, and field survey data to quantitatively estimate the forest volume in Saihanwula Nature Reserve, located in Inner Mongolia, China, on the southern part of Daxing’anling Mountains. The study evaluated the performance of multi-source remote sensing features by using recursive feature elimination (RFE) to select the most relevant factors and applied four machine learning models—multiple linear regression (MLR), k-nearest neighbors (kNN), random forest (RF), and gradient boosting regression tree (GBRT)—to develop volume estimation models. The evaluation metrics include the coefficient of determination (R2), root mean square error (RMSE), and relative root mean square error (rRMSE). The results show that (1) forest Canopy Height Model (CHM) data were strongly correlated with forest volume, helping to alleviate the reflectance saturation issues inherent in spectral texture data. The fusion of CHM and spectral data resulted in an improved volume estimation model with R2 = 0.75 and RMSE = 8.16 m3/hm2, highlighting the importance of integrating multi-source canopy height information for more accurate volume estimation. (2) Volume estimation accuracy varied across different tree species. For Betula platyphylla, we obtained R2 = 0.71 and RMSE = 6.96 m3/hm2; for Quercus mongolica, R2 = 0.74 and RMSE = 6.90 m3/hm2; and for Populus davidiana, R2 = 0.51 and RMSE = 9.29 m3/hm2. The total forest volume in the Saihanwula Reserve ranges from 50 to 110 m3/hm2. (3) Among the four machine learning models, GBRT consistently outperformed others in all evaluation metrics, achieving the highest R2 of 0.86, lowest RMSE of 9.69 m3/hm2, and lowest rRMSE of 24.57%, suggesting its potential for forest biomass estimation. In conclusion, accurate estimation of forest volume is critical for evaluating forest management practices and timber resources. While this integrated approach shows promise, its operational application requires further external validation and uncertainty analysis to support policy-relevant decisions. The integration of multi-source remote sensing data provides valuable support for forest resource accounting, economic value assessment, and monitoring dynamic changes in forest ecosystems. Full article
(This article belongs to the Special Issue Mapping and Modeling Forests Using Geospatial Technologies)
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14 pages, 1848 KiB  
Article
RadiomiX for Radiomics Analysis: Automated Approaches to Overcome Challenges in Replicability
by Harel Kotler, Luca Bergamin, Fabio Aiolli, Elena Scagliori, Angela Grassi, Giulia Pasello, Alessandra Ferro, Francesca Caumo and Gisella Gennaro
Diagnostics 2025, 15(15), 1968; https://doi.org/10.3390/diagnostics15151968 (registering DOI) - 5 Aug 2025
Abstract
Background/Objectives: To simplify the decision-making process in radiomics by employing RadiomiX, an algorithm designed to automatically identify the best model combination and validate them across multiple environments was developed, thus enhancing the reliability of results. Methods: RadiomiX systematically tests classifier and feature [...] Read more.
Background/Objectives: To simplify the decision-making process in radiomics by employing RadiomiX, an algorithm designed to automatically identify the best model combination and validate them across multiple environments was developed, thus enhancing the reliability of results. Methods: RadiomiX systematically tests classifier and feature selection method combinations known to be suitable for radiomic datasets to determine the best-performing configuration across multiple train–test splits and K-fold cross-validation. The framework was validated on four public retrospective radiomics datasets including lung nodules, metastatic breast cancer, and hepatic encephalopathy using CT, PET/CT, and MRI modalities. Model performance was assessed using the area under the receiver-operating-characteristic curve (AUC) and accuracy metrics. Results: RadiomiX achieved superior performance across four datasets: LLN (AUC = 0.850 and accuracy = 0.785), SLN (AUC = 0.845 and accuracy = 0.754), MBC (AUC = 0.889 and accuracy = 0.833), and CHE (AUC = 0.837 and accuracy = 0.730), significantly outperforming original published models (p < 0.001 for LLN/SLN and p = 0.023 for MBC accuracy). When original published models were re-evaluated using ten-fold cross-validation, their performance decreased substantially: LLN (AUC = 0.783 and accuracy = 0.731), SLN (AUC = 0.748 and accuracy = 0.714), MBC (AUC = 0.764 and accuracy = 0.711), and CHE (AUC = 0.755 and accuracy = 0.677), further highlighting RadiomiX’s methodological advantages. Conclusions: Systematically testing model combinations using RadiomiX has led to significant improvements in performance. This emphasizes the potential of automated ML as a step towards better-performing and more reliable radiomic models. Full article
(This article belongs to the Section Machine Learning and Artificial Intelligence in Diagnostics)
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16 pages, 1907 KiB  
Article
Mapping QTL and Identifying Candidate Genes for Resistance to Brown Stripe in Highly Allo-Autopolyploid Modern Sugarcane
by Wei Cheng, Zhoutao Wang, Fu Xu, Yingying Yang, Jie Fang, Jianxiong Wu, Junjie Pan, Qiaomei Wang and Liping Xu
Horticulturae 2025, 11(8), 922; https://doi.org/10.3390/horticulturae11080922 (registering DOI) - 5 Aug 2025
Abstract
Disease resistance is one of the most important target traits for sugarcane genetic improvement. Sugarcane brown stripe (SBS) caused by Helminthosporium stenospilum is one of the most destructive foliar diseases, which not only reduces harvest cane yield but also sugar content. This study [...] Read more.
Disease resistance is one of the most important target traits for sugarcane genetic improvement. Sugarcane brown stripe (SBS) caused by Helminthosporium stenospilum is one of the most destructive foliar diseases, which not only reduces harvest cane yield but also sugar content. This study aimed to identify quantitative trait loci (QTL) and candidate genes associated with SBS resistance. Here, the phenotypic investigation in six field habitats showed a continuous normal distribution, revealing that the SBS resistance trait is a quantitative trait. Two high-density linkage maps based on the single-dose markers calling from the Axiom Sugarcane100K SNP chip were constructed for the dominant sugarcane cultivars YT93-159 (SBS-resistant) and ROC22 (SBS-susceptible) with a density of 2.53 cM and 2.54 cM per SNP marker, and mapped on 87 linkage groups (LGs) and 80 LGs covering 3069.45 cM and 1490.34 cM of genetic distance, respectively. A total of 32 QTL associated with SBS resistance were detected by QTL mapping, which explained 3.73–11.64% of the phenotypic variation, and the total phenotypic variance explained (PVE) in YT93-159 and ROC22 was 107.44% and 79.09%, respectively. Among these QTL, four repeatedly detected QTL (qSBS-Y38-1, qSBS-Y38-2, qSBS-R8, and qSBS-R46) were considered stable QTL. Meanwhile, two major QTL, qSBS-Y38 and qSBS-R46, could account for 11.47% and 11.64% of the PVE, respectively. Twenty-five disease resistance candidate genes were screened by searching these four stable QTL regions in their corresponding intervals, of which Soffic.01G0010840-3C (PR3) and Soffic.09G0017520-1P (DND2) were significantly up-regulated in YT93-159 by qRT-PCR, while Soffic.01G0040620-1P (EDR2) was significantly up-regulated in ROC22. These results will provide valuable insights for future studies on sugarcane breeding in combating this disease. Full article
(This article belongs to the Special Issue Disease Diagnosis and Control for Fruit Crops)
26 pages, 10877 KiB  
Article
Analysis of Mechanical Properties of Crumb Rubber Tires Mixed with Silty Sand of Various Sizes and Percentages
by Sindambiwe Theogene, Jianxiu Sun, Yanzi Wang, Run Xu, Jie Sun, Yuchen Tao, Changyong Zhang, Qingshuo Sun, Jiandong Wu, Hongya Yue and Hongbo Zhang
Polymers 2025, 17(15), 2144; https://doi.org/10.3390/polym17152144 (registering DOI) - 5 Aug 2025
Abstract
Every year, a billion tires are discarded worldwide, with only a small percentage being recycled. This leads to significant environmental hazards, such as fire risks and improper disposal. Silty sand also presents technical challenges due to its poor shear strength, susceptibility to erosion, [...] Read more.
Every year, a billion tires are discarded worldwide, with only a small percentage being recycled. This leads to significant environmental hazards, such as fire risks and improper disposal. Silty sand also presents technical challenges due to its poor shear strength, susceptibility to erosion, and low permeability. This study explores the incorporation of crumb rubber derived from waste tires into silty sand to enhance its mechanical properties. Crumb rubber particles of varying sizes (3–6 mm, 5–10 mm, and 10–20 mm) were mixed with silty sand at 0%, 3%, 6%, and 9% percentages, respectively. Triaxial compression tests of unconsolidated and consolidated undrained tests with cell pressures of 100, 300, and 500 kPa were conducted. The deviatoric stress, shear stress, and stiffness modulus were investigated. The results revealed that the addition of crumb rubber significantly increased the deviatoric and shear stresses, especially at particle sizes of 5–10 mm, with contents of 3%, 6%, and 9%. Additionally, the stiffness modulus was notably reduced in the mixture containing 6% crumb rubber tire. These findings suggest that incorporating crumb rubber tires into silty sand not only improves silty sand performance but also offers an environmentally sustainable approach to tire waste recycling, making it a viable strategy for silty sand stabilization in construction and geotechnical engineering performance. Full article
(This article belongs to the Section Polymer Analysis and Characterization)
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21 pages, 3334 KiB  
Article
Market Research on Waste Biomass Material for Combined Energy Production in Bulgaria: A Path Toward Enhanced Energy Efficiency
by Penka Zlateva, Angel Terziev, Mariana Murzova, Nevena Mileva and Momchil Vassilev
Energies 2025, 18(15), 4153; https://doi.org/10.3390/en18154153 - 5 Aug 2025
Abstract
Using waste biomass as a raw material for the combined production of electricity and heat offers corresponding energy, economic, environmental and resource efficiency benefits. The study examines both the performance of a system for combined energy production based on the Organic Rankine Cycle [...] Read more.
Using waste biomass as a raw material for the combined production of electricity and heat offers corresponding energy, economic, environmental and resource efficiency benefits. The study examines both the performance of a system for combined energy production based on the Organic Rankine Cycle (ORC) utilizing wood biomass and the market interest in its deployment within Bulgaria. Its objective is to propose a technically and economically viable solution for the recovery of waste biomass through the combined production of electricity and heat while simultaneously assessing the readiness of industrial and municipal sectors to adopt such systems. The cogeneration plant incorporates an ORC module enhanced with three additional economizers that capture residual heat from flue gases. Operating on 2 t/h of biomass, the system delivers 1156 kW of electric power and 3660 kW of thermal energy, recovering an additional 2664 kW of heat. The overall energy efficiency reaches 85%, with projected annual revenues exceeding EUR 600,000 and a reduction in carbon dioxide emissions of over 5800 t/yr. These indicators can be achieved through optimal installation and operation. When operating at a reduced load, however, the specific fuel consumption increases and the overall efficiency of the installation decreases. The marketing survey results indicate that 75% of respondents express interest in adopting such technologies, contingent upon the availability of financial incentives. The strongest demand is observed for systems with capacities up to 1000 kW. However, significant barriers remain, including high initial investment costs and uneven access to raw materials. The findings confirm that the developed system offers a technologically robust, environmentally efficient and market-relevant solution, aligned with the goals of energy independence, sustainability and the transition to a low-carbon economy. Full article
(This article belongs to the Section B: Energy and Environment)
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28 pages, 2057 KiB  
Article
Design and Fabrication of a Cost-Effective, Remote-Controlled, Variable-Rate Sprayer Mounted on an Autonomous Tractor, Specifically Integrating Multiple Advanced Technologies for Application in Sugarcane Fields
by Pongpith Tuenpusa, Kiattisak Sangpradit, Mano Suwannakam, Jaturong Langkapin, Alongklod Tanomtong and Grianggai Samseemoung
AgriEngineering 2025, 7(8), 249; https://doi.org/10.3390/agriengineering7080249 - 5 Aug 2025
Abstract
The integration of a real-time image processing system using multiple webcams with a variable rate spraying system mounted on the back of an unmanned tractor presents an effective solution to the labor shortage in agriculture. This research aims to design and fabricate a [...] Read more.
The integration of a real-time image processing system using multiple webcams with a variable rate spraying system mounted on the back of an unmanned tractor presents an effective solution to the labor shortage in agriculture. This research aims to design and fabricate a low-cost, variable-rate, remote-controlled sprayer specifically for use in sugarcane fields. The primary method involves the modification of a 15-horsepower tractor, which will be equipped with a remote-control system to manage both the driving and steering functions. A foldable remote-controlled spraying arm is installed at the rear of the unmanned tractor. The system operates by using a webcam mounted on the spraying arm to capture high-angle images above the sugarcane canopy. These images are recorded and processed, and the data is relayed to the spraying control system. As a result, chemicals can be sprayed on the sugarcane accurately and efficiently based on the insights gained from image processing. Tests were conducted at various nozzle heights of 0.25 m, 0.5 m, and 0.75 m. The average system efficiency was found to be 85.30% at a pressure of 1 bar, with a chemical spraying rate of 36 L per hour and a working capacity of 0.975 hectares per hour. The energy consumption recorded was 0.161 kWh, while fuel consumption was measured at 6.807 L per hour. In conclusion, the development of the remote-controlled variable rate sprayer mounted on an unmanned tractor enables immediate and precise chemical application through remote control. This results in high-precision spraying and uniform distribution, ultimately leading to cost savings, particularly by allowing for adjustments in nozzle height from a minimum of 0.25 m to a maximum of 0.75 m from the target. Full article
(This article belongs to the Special Issue Implementation of Artificial Intelligence in Agriculture)
18 pages, 1589 KiB  
Article
EEG-Based Attention Classification for Enhanced Learning Experience
by Madiha Khalid Syed, Hong Wang, Awais Ahmad Siddiqi, Shahnawaz Qureshi and Mohamed Amin Gouda
Appl. Sci. 2025, 15(15), 8668; https://doi.org/10.3390/app15158668 (registering DOI) - 5 Aug 2025
Abstract
This paper presents a novel EEG-based learning system designed to enhance the efficiency and effectiveness of studying by dynamically adjusting the difficulty level of learning materials based on real-time attention levels. In the training phase, EEG signals corresponding to high and low concentration [...] Read more.
This paper presents a novel EEG-based learning system designed to enhance the efficiency and effectiveness of studying by dynamically adjusting the difficulty level of learning materials based on real-time attention levels. In the training phase, EEG signals corresponding to high and low concentration levels are recorded while participants engage in quizzes to learn and memorize Chinese characters. The attention levels are determined based on performance metrics derived from the quiz results. Following extensive preprocessing, the EEG data undergoes severmal feature extraction steps: removal of artifacts due to eye blinks and facial movements, segregation of waves based on their frequencies, similarity indexing with respect to delay, binary thresholding, and (PCA). These extracted features are then fed into a k-NN classifier, which accurately distinguishes between high and low attention brain wave patterns, with the labels derived from the quiz performance indicating high or low attention. During the implementation phase, the system continuously monitors the user’s EEG signals while studying. When low attention levels are detected, the system increases the repetition frequency and reduces the difficulty of the flashcards to refocus the user’s attention. Conversely, when high concentration levels are identified, the system escalates the difficulty level of the flashcards to maximize the learning challenge. This adaptive approach ensures a more effective learning experience by maintaining optimal cognitive engagement, resulting in improved learning rates, reduced stress, and increased overall learning efficiency. This adaptive approach ensures a more effective learning experience by maintaining optimal cognitive engagement, resulting in improved learning rates, reduced stress, and increased overall learning efficiency. Our results indicate that this EEG-based adaptive learning system holds significant potential for personalized education, fostering better retention and understanding of Chinese characters. Full article
(This article belongs to the Special Issue EEG Horizons: Exploring Neural Dynamics and Neurocognitive Processes)
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35 pages, 6795 KiB  
Article
Thermal Analysis of Energy Efficiency Performance and Indoor Comfort in a LEED-Certified Campus Building in the United Arab Emirates
by Khushbu Mankani, Mutasim Nour and Hassam Nasarullah Chaudhry
Energies 2025, 18(15), 4155; https://doi.org/10.3390/en18154155 - 5 Aug 2025
Abstract
Enhancing the real-world performance of sustainably designed and certified green buildings remains a significant challenge, particularly in hot climates where efforts to improve thermal comfort often conflict with energy efficiency goals. In the United Arab Emirates (UAE), even newly constructed facilities with green [...] Read more.
Enhancing the real-world performance of sustainably designed and certified green buildings remains a significant challenge, particularly in hot climates where efforts to improve thermal comfort often conflict with energy efficiency goals. In the United Arab Emirates (UAE), even newly constructed facilities with green building certifications present opportunities for retrofitting and performance optimization. This study investigates the energy and thermal comfort performance of a LEED Gold-certified, mixed-use university campus in Dubai through a calibrated digital twin developed using IES thermal modelling software. The analysis evaluated existing sustainable design strategies alongside three retrofit energy conservation measures (ECMs): (1) improved building envelope U-values, (2) installation of additional daylight sensors, and (3) optimization of fan coil unit efficiency. Simulation results demonstrated that the three ECMs collectively achieved a total reduction of 15% in annual energy consumption. Thermal comfort was assessed using operative temperature distributions, Predicted Mean Vote (PMV), and Predicted Percentage of Dissatisfaction (PPD) metrics. While fan coil optimization yielded the highest energy savings, it led to less favorable comfort outcomes. In contrast, enhancing envelope U-values maintained indoor conditions consistently within ASHRAE-recommended comfort zones. To further support energy reduction and progress toward Net Zero targets, the study also evaluated the integration of a 228.87 kW rooftop solar photovoltaic (PV) system, which offset 8.09% of the campus’s annual energy demand. By applying data-driven thermal modelling to assess retrofit impacts on both energy performance and occupant comfort in a certified green building, this study addresses a critical gap in the literature and offers a replicable framework for advancing building performance in hot climate regions. Full article
(This article belongs to the Special Issue Energy Efficiency and Thermal Performance in Buildings)
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24 pages, 4967 KiB  
Article
CatBoost-Optimized Hyperspectral Modeling for Accurate Prediction of Wood Dyeing Formulations
by Xuemei Guan, Rongkai Xue, Zhongsheng He, Shibin Chen and Xiangya Chen
Forests 2025, 16(8), 1279; https://doi.org/10.3390/f16081279 - 5 Aug 2025
Abstract
This study proposes a CatBoost-enhanced hyperspectral modeling approach for accurate prediction of wood dyeing formulations. Using Pinus sylvestris var. mongolica veneer as the substrate, 306 samples with gradient dye concentrations were prepared, and their reflectance spectra (400–700 nm) were acquired. After noise reduction [...] Read more.
This study proposes a CatBoost-enhanced hyperspectral modeling approach for accurate prediction of wood dyeing formulations. Using Pinus sylvestris var. mongolica veneer as the substrate, 306 samples with gradient dye concentrations were prepared, and their reflectance spectra (400–700 nm) were acquired. After noise reduction and sensitive band selection (400–450 nm, 550–600 nm, and 600–650 nm), spectral descriptors were extracted as model inputs. The CatBoost algorithm, optimized via k-fold cross-validation and grid search, outperformed XGBoost, random forest, and SVR in prediction accuracy, achieving MSE = 0.00271 and MAE = 0.0349. Scanning electron microscopy (SEM) revealed the correlation between dye particle distribution and spectral response, validating the model’s physical basis. This approach enables intelligent dye formulation control in industrial wood processing, reducing color deviation (ΔE < 1.75) and dye waste by approximately 25%. Full article
(This article belongs to the Section Wood Science and Forest Products)
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24 pages, 3027 KiB  
Article
Resisting the Final Line: Phenotypic Detection of Resistance to Last-Resort Antimicrobials in Gram-Negative Bacteria Isolated from Wild Birds in Northern Italy
by Maria Cristina Rapi, Joel Filipe, Laura Filippone Pavesi, Stefano Raimondi, Maria Filippa Addis, Maria Pia Franciosini and Guido Grilli
Animals 2025, 15(15), 2289; https://doi.org/10.3390/ani15152289 - 5 Aug 2025
Abstract
Antimicrobial resistance (AMR) is a growing global health threat, with wild birds increasingly recognized as potential reservoirs of resistant pathogens and as sentinels of environmental AMR. This study investigated the occurrence and AMR profiles of Gram-negative bacteria isolated from wild birds that died [...] Read more.
Antimicrobial resistance (AMR) is a growing global health threat, with wild birds increasingly recognized as potential reservoirs of resistant pathogens and as sentinels of environmental AMR. This study investigated the occurrence and AMR profiles of Gram-negative bacteria isolated from wild birds that died at the Wildlife Rescue Center in Vanzago, Lombardy, in 2024. Cloacal swabs were collected from 112 birds representing various ecological categories. A total of 157 Gram-negative bacteria were isolated and identified, including clinically relevant genera and species, such as Escherichia coli, Klebsiella pneumoniae, Enterobacter spp., Salmonella spp., Pseudomonas aeruginosa, and Acinetobacter baumannii. Antimicrobial susceptibility testing revealed resistance to first-line and critically important antimicrobials, including those exclusively authorized for human use. Notably, a phenotype compatible with Extended-Spectrum Beta-Lactamase (ESBL) production was detected in four out of ten (40%) K. pneumoniae isolates. In addition, 20 out of the 157 (12.7%) isolated bacteria phenotypically exhibited a resistance profile indicative of AmpC beta-lactamase (AmpC) production, including Enterobacter spp. and P. aeruginosa. Resistance patterns were particularly interesting in birds with carnivorous, scavenging, or migratory-associated behaviors. These findings highlight the role of wild birds in the ecology and dissemination of antimicrobial-resistant bacteria (ARB) and highlight the need for wildlife-based AMR monitoring programs as part of a One Health approach. Full article
(This article belongs to the Section Birds)
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24 pages, 9491 KiB  
Article
Provenance of the Upper Permian Longtan Formation in Southern Anhui Province in the Lower Yangtze Region, China: Insights from Sedimentary and Geochemical Characteristics
by Sizhe Deng, Dujie Hou and Wenli Ma
Minerals 2025, 15(8), 831; https://doi.org/10.3390/min15080831 (registering DOI) - 5 Aug 2025
Abstract
There are many controversies over the material sources of the Late Paleozoic strata in the Lower Yangtze region, and there is a lack of consensus on the basin source–sink system, which hinders the reconstruction of Late Paleozoic paleogeography and exploration of energy and [...] Read more.
There are many controversies over the material sources of the Late Paleozoic strata in the Lower Yangtze region, and there is a lack of consensus on the basin source–sink system, which hinders the reconstruction of Late Paleozoic paleogeography and exploration of energy and mineral resources in the area. This study aimed to clarify the sedimentary provenance and tectonic background of the Upper Permian Longtan Formation in the Chizhou area of southern Anhui Province. The key objectives were to: (i) analyze the geochemical characteristics of sandstones using major, trace, and rare earth elements; (ii) determine the tectonic setting of the sediment source region based on discrimination diagrams; and (iii) integrate geochemical, sedimentological, and paleocurrent data to reconstruct the source-to-sink system. The geochemical data suggest that the sandstone samples exhibit relatively high SiO2, Fe2O3, MgO, and Na2O content and relatively low TiO2, Al2O3, and K2O content, consistent with average values of post-Archean Australian shale (PAAS) and the upper continental crust (UCC). The chondrite-normalized rare earth element patterns resemble PAAS, with enrichment in light REEs and depletion in heavy REEs. Tectonic discrimination diagrams indicate a provenance from active continental margins and continental island arcs, with minor input from passive continental margins. Combined with regional tectonic context and paleocurrent measurements, the results suggest that the Longtan Formation sediments primarily originated from the Neoproterozoic Jiangnan orogenic belt and the Cathaysia Block, notably the Wuyi terrane. These research results not only provide new geological data for further clarifying the provenance of Late Paleozoic sedimentary basins in the Lower Yangtze region but also establish the foundation for constructing the Late Paleozoic tectonic paleogeographic pattern in South China. Full article
(This article belongs to the Special Issue Selected Papers from the 7th National Youth Geological Congress)
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18 pages, 2229 KiB  
Article
Cell Surface Proteomics Reveals Hypoxia-Regulated Pathways in Cervical and Bladder Cancer
by Faris Alanazi, Ammar Sharif, Melissa Kidd, Emma-Jayne Keevill, Vanesa Biolatti, Richard D. Unwin, Peter Hoskin, Ananya Choudhury, Tim A. D. Smith and Conrado G. Quiles
Proteomes 2025, 13(3), 36; https://doi.org/10.3390/proteomes13030036 - 5 Aug 2025
Abstract
Background Plasma membrane proteins (PMPs) play key roles in cell signalling, adhesion, and trafficking, and are attractive therapeutic targets in cancer due to their surface accessibility. However, their typically low abundance limits detection by conventional proteomic approaches. Methods: To improve PMP detection, we [...] Read more.
Background Plasma membrane proteins (PMPs) play key roles in cell signalling, adhesion, and trafficking, and are attractive therapeutic targets in cancer due to their surface accessibility. However, their typically low abundance limits detection by conventional proteomic approaches. Methods: To improve PMP detection, we employed a surface proteomics workflow combining cell surface biotinylation and affinity purification prior to LC-MS/MS analysis in cervical (SiHa) and bladder (UMUC3) cancer cell lines cultured under normoxic (21% O2) or hypoxic (0.1% O2) conditions. Results: In SiHa cells, 43 hypoxia-upregulated proteins were identified exclusively in the biotin-enriched fraction, including ITGB2, ITGA7, AXL, MET, JAG2, and CAV1/CAV2. In UMUC3 cells, 32 unique upregulated PMPs were detected, including CD55, ADGRB1, SLC9A1, NECTIN3, and ACTG1. These proteins were not observed in corresponding whole-cell lysates and are associated with extracellular matrix remodelling, immune modulation, and ion transport. Biotinylation enhanced the detection of membrane-associated pathways such as ECM organisation, integrin signalling, and PI3K–Akt activation. Protein–protein interaction analysis revealed links between membrane receptors and intracellular stress regulators, including mitochondrial proteins. Conclusions: These findings demonstrate that surface biotinylation improves the sensitivity and selectivity of plasma membrane proteomics under hypoxia, revealing hypoxia-responsive proteins and pathways not captured by standard whole-cell analysis. Full article
(This article belongs to the Section Proteomics of Human Diseases and Their Treatments)
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13 pages, 4131 KiB  
Article
MBE Growth of High-Quality HgCdSe for Infrared Detector Applications
by Zekai Zhang, Wenwu Pan, Gilberto A. Umana Membreno, Shuo Ma, Lorenzo Faraone and Wen Lei
Materials 2025, 18(15), 3676; https://doi.org/10.3390/ma18153676 - 5 Aug 2025
Abstract
HgCdSe has recently been proposed as a potential alternative material to HgCdTe for fabricating high-performance infrared detectors. This work presents a study on the growth of high-crystalline-quality HgCdSe materials on GaSb (211)B substrates via molecular beam epitaxy and demonstration of the first prototype [...] Read more.
HgCdSe has recently been proposed as a potential alternative material to HgCdTe for fabricating high-performance infrared detectors. This work presents a study on the growth of high-crystalline-quality HgCdSe materials on GaSb (211)B substrates via molecular beam epitaxy and demonstration of the first prototype HgCdSe-based mid-wave infrared detectors. By optimizing the MBE growth parameters, and especially the thermal cleaning process of the GaSb substrate surface prior to epitaxial growth, high-quality HgCdSe material was achieved with a record XRD full width at half maximum of ~65 arcsec. At a temperature of 77 K, the mid-wave infrared HgCdSe n-type material demonstrated a minority carrier lifetime of ~1.19 µs, background electron concentration of ~2.2 × 1017 cm−3, and electron mobility of ~1.6 × 104 cm2/Vs. The fabricated mid-wave infrared HgCdSe photoconductor presented a cut-off wavelength of 4.2 µm, a peak responsivity of ~40 V/W, and a peak detectivity of ~1.2 × 109 cmHz1/2/W at 77 K. Due to the relatively high background electron concentration, the detector performance is lower than that of state-of-the-art low-doped HgCdTe counterparts. However, these preliminary results indicate the great potential of HgCdSe materials for achieving next-generation IR detectors on large-area substrates with features of lower cost and larger array format size. Full article
(This article belongs to the Section Optical and Photonic Materials)
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