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14 pages, 2702 KB  
Article
Effects of Biochar Feedstock and Co-Application with Organic Nitrogen Fertilizer on Soil Carbon Pools and Inorganic Nitrogen Availability
by Jared P. Conner, Sophie E. Drew, Steven G. McBride, Harry W. Groot and J. E. Barrett
Agronomy 2026, 16(18), 1771; https://doi.org/10.3390/agronomy16181771 (registering DOI) - 10 Sep 2026
Abstract
Biochar can increase soil carbon (C) and nutrient retention, but application of raw biochar may reduce inorganic nitrogen (N) availability and crop yields. As a result, biochar is sometimes co-applied with organic fertilizers, though the efficacy of this practice for preventing decreases in [...] Read more.
Biochar can increase soil carbon (C) and nutrient retention, but application of raw biochar may reduce inorganic nitrogen (N) availability and crop yields. As a result, biochar is sometimes co-applied with organic fertilizers, though the efficacy of this practice for preventing decreases in inorganic N remains unclear. We examined how applications of hardwood, hay, and softwood biochars (25 Mg ha−1), with and without blood meal co-application, affected C and N dynamics in a Southwest Virginia pasture soil. All biochars increased soil C pools initially and after 11 months. Biochar C accumulated in the coarse particulate organic matter fraction, with hay and softwood biochar C also accumulating in the fine particulate and mineral-associated fractions, respectively. Immediately after application, inorganic N was increased by blood meal co-application, but biochar had no short-term effect on inorganic N. Conversely, nitrate levels were ~81% lower in biochar-amended plots after 11 months, regardless of blood meal co-application and biochar feedstock. These findings suggest that co-application with organic fertilizer may only provide short-term N benefits, highlighting the need to monitor crop yield and N status in seasons following biochar application, as soil test nitrate alone is not a reliable predictor of crop yield in biochar-amended soils. Full article
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12 pages, 2073 KB  
Article
An RNAi-Based Vulnerability in the White-Backed Planthopper: Silencing SfHSP70-8 Impairs Thermotolerance and Insecticide Susceptibility in a Key Rice Pest
by Zhenzhen Wang, Chongfen Yi, Hongwei Zhang, Liugen Hao, Yi Yan and Zhanlie Yang
Agronomy 2026, 16(18), 1769; https://doi.org/10.3390/agronomy16181769 (registering DOI) - 10 Sep 2026
Abstract
Heat shock protein 70 (HSP70) serves as a critical molecular chaperone governing environmental stress responses in insects. This study aimed to characterize the expression pattern of SfHSP70-8 and determine its functional role in thermotolerance and insecticide susceptibility in the white-backed planthopper, Sogatella furcifera [...] Read more.
Heat shock protein 70 (HSP70) serves as a critical molecular chaperone governing environmental stress responses in insects. This study aimed to characterize the expression pattern of SfHSP70-8 and determine its functional role in thermotolerance and insecticide susceptibility in the white-backed planthopper, Sogatella furcifera. Here, we cloned and characterized SfHSP70-8, a cytosolic member of the HSP70 family from S. furcifera. The encoded protein contains characteristic conserved domains and shares close sequence identity with the HSP70 homolog of Laodelphax striatellus. Spatiotemporal expression profiling revealed ubiquitous transcription across all developmental stages, peaking in third-instar nymphs, and pronounced enrichment in the gut and fat body. Transcript levels were robustly elevated following exposure to both thermal extremes (10–40 °C) and LC50 concentrations of triflumezopyrim, sulfoxaflor, and imidacloprid. RNAi-mediated silencing of SfHSP70-8 significantly compromised tolerance to triflumezopyrim and sulfoxaflor while leaving imidacloprid susceptibility unchanged, and markedly decreased survival rates under chronic heat stress at 30 °C and 35 °C. Collectively, these findings demonstrate that SfHSP70-8 functions as an essential regulator of thermotolerance and insecticide adaptation in S. furcifera, offering a potential molecular target for future development in sustainable pest management. Full article
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19 pages, 2412 KB  
Article
Cunermuspir, a Copper(I)–Niacin Complex, Modulates Mitochondrial Respiration and Cellular Oxidant Handling in Fibroblasts from Children with Autism Spectrum Disorder
by Sophie Wallace, Spencer Lawes, Adrienne C. Scheck and Richard E. Frye
Antioxidants 2026, 15(9), 1147; https://doi.org/10.3390/antiox15091147 (registering DOI) - 10 Sep 2026
Abstract
Copper is a redox-active transition metal that is essential for the assembly and catalytic function of cytochrome c oxidase (Complex IV), the terminal enzyme of the mitochondrial electron transport chain and a principal site of physiological oxygen reduction. Elevated Complex IV activity and [...] Read more.
Copper is a redox-active transition metal that is essential for the assembly and catalytic function of cytochrome c oxidase (Complex IV), the terminal enzyme of the mitochondrial electron transport chain and a principal site of physiological oxygen reduction. Elevated Complex IV activity and respiratory chain uncoupling are among the most consistently replicated biological findings in autism spectrum disorder (ASD), yet the interaction between mitochondrial copper delivery, respiration, and cellular oxidant handling in ASD has not been systematically defined. We treated dermal fibroblasts from 9 children with ASD and 10 typically developing controls with the copper(I)–niacin complex Cunermuspir (0, 50, or 100 µM for 1 or 24 h exposure) and challenged them with graded concentrations (0–5.0 µM) of the redox-cycling agent 2,3-dimethoxy-1,4-naphthoquinone (DMNQ). Mitochondrial respiration was profiled by Seahorse XF respirometry (2133 observations across 28 experiments), and cellular reactive oxygen species (CellROX™ Green) and mitochondrial mass/polarization (MitoTracker™ Deep Red) were quantified by fluorescence imaging. ASD fibroblasts displayed a hypermetabolic, uncoupled respiratory phenotype (~73% higher baseline respiration; ~109% higher proton leak; reduced coupling efficiency). Linear mixed models with polynomial dose terms revealed significant ASD × Cunermuspir complex interactions (ASD × Cunermuspir and/or their higher-order interactions with DMNQ and treatment) for four respiratory parameters. ASD cells exhibited lower steady-state oxidation-dependent CellROX™ Green fluorescence than controls despite greater respiratory uncoupling, as well as lower steady-state MitoTracker™ Deep Red fluorescence; Cunermuspir reshaped the MitoTracker™ DMNQ dose–response in an ASD-selective manner. These findings identify the Cunermuspir-associated modulation of the ASD mitochondrial and oxidant handling phenotype and motivate further mechanistic and translational evaluation. Full article
(This article belongs to the Section Health Outcomes of Antioxidants and Oxidative Stress)
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10 pages, 224 KB  
Review
Cell Therapy Transplant Canada (CTTC) Consensus-Based Review for the Use of Supportive Care and Topical Therapies for Chronic Graft-Versus-Host Disease
by Kylie Lepic, Joseph Aziz, Gizelle Popradi, Christopher Lemieux, Jennifer White, Stephanie Maier, Mohamed Elemary, Kirk Schultz, Kristjan Paulson, Ram Vasudevan Nampoothiri, David Allan and Dennis Dong Hwan Kim
Curr. Oncol. 2026, 33(9), 548; https://doi.org/10.3390/curroncol33090548 (registering DOI) - 10 Sep 2026
Abstract
This is a consensus-based Canadian review with the primary purpose of expanding knowledge regarding supportive and topical therapies for chronic graft vs. host disease (cGvHD). There is often a lack of confidence in treating certain organ specific manifestations, and access to specialists with [...] Read more.
This is a consensus-based Canadian review with the primary purpose of expanding knowledge regarding supportive and topical therapies for chronic graft vs. host disease (cGvHD). There is often a lack of confidence in treating certain organ specific manifestations, and access to specialists with organ specific expertise varies across the country. This paper covers information gained from a literature review and Canadian transplanter expertise and will serve as a guide for hematopoietic cell transplant healthcare providers to topical cGvHD therapies accessible in Canada. We will review common symptoms and signs focused specifically on skin, mouth, eye and genital tract cGvHD and on lifestyle modifications and topical treatments as an adjunct to our recent publication on systemic treatment for cGvHD. Full article
(This article belongs to the Section Cell Therapy)
29 pages, 8282 KB  
Article
Non-Invasive Identification of Blue-And-White Porcelain: Comparison of Vietnamese, Yunnan and Jingdezhen Wares Using Reasoned Visualization and PCA
by Philippe Colomban, Gulsu Simsek-Franci, Chun-wei Chen, Han-chun Hsieh and Ching-Fei Shih
Heritage 2026, 9(9), 362; https://doi.org/10.3390/heritage9090362 (registering DOI) - 10 Sep 2026
Abstract
The XRF, Raman, and fluorescence signatures of approximately fifteen blue-and-white and white porcelain sherds are compared. The assemblage comprises fourteenth- to sixteenth-century porcelain sherds, including Yuan and Ming wares from the Jingdezhen kiln sites, fifteenth- to sixteenth-century wares from the Yuxi and Jianshui [...] Read more.
The XRF, Raman, and fluorescence signatures of approximately fifteen blue-and-white and white porcelain sherds are compared. The assemblage comprises fourteenth- to sixteenth-century porcelain sherds, including Yuan and Ming wares from the Jingdezhen kiln sites, fifteenth- to sixteenth-century wares from the Yuxi and Jianshui kiln sites in Yunnan (China), and Vietnamese sherds comparable to ceramics recovered from the Cu Lao Cham (Hoi An) shipwreck preserved in private collections. Particular attention is paid to the XRF signals of impurities associated with sands (Zr, Y), fluxes (Rb, Sr), and cobalt-bearing ores (As, Mn, Fe, Ni, Bi), as well as to the Raman identification of specific phases in Chinese and Vietnamese porcelains. The similarity between Yunnan and Vietnamese blue-and-white wares is confirmed, notably by their high zirconium concentrations, whereas rubidium concentrations provide a means of distinguishing between the two regions. Overall, XRF signatures enable the non-invasive classification of the sherds according to their material characteristics. The resulting classifications are based on visualizations of clusters in the elemental compositional data using selected elements relevant to geological provenance and ceramic processing. These classifications are then compared with those obtained using PCA and hierarchical clustering based on Euclidean distances. Raman spectra highlight the presence of specific phases, including calcium silicates and phosphates. For the first time, particular emphasis is placed on the importance of considering the entire fluorescence spectrum as an identification tool. Special attention is given to the chromium fluorescence doublet with the α-alumina phase formed during the transformation from 2:1 mullite to 3:2 mullite at temperatures above 1200–1250 °C. Full article
(This article belongs to the Section Materials and Heritage)
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8 pages, 535 KB  
Case Report
Biochemical and Clinical Characterization of a Patient with Partial Biotinidase Deficiency Carrying the Rare BTD c.690C>G (p.Phe230Leu) Variant: A Case Report
by Daniela Semeraro, Sara Verrocchio, Rossella Ferrante, Claudia Rossi, Damiana Pieragostino, Alex Zappacosta, Carlotta Buccolini, Silvia Di Michele, Luca Natale, Gessica Di Carlo, Cesidio Giuliani, Ines Bucci and Valentina Gatta
Life 2026, 16(9), 1508; https://doi.org/10.3390/life16091508 (registering DOI) - 10 Sep 2026
Abstract
Biotinidase deficiency (BD) is an autosomal recessive inherited disorder in which the enzyme biotinidase (BTD) is totally or partially defective and the vitamin biotin is not recycled. More than 200 pathogenic variants in the BTD gene have been identified, causing complete or partial [...] Read more.
Biotinidase deficiency (BD) is an autosomal recessive inherited disorder in which the enzyme biotinidase (BTD) is totally or partially defective and the vitamin biotin is not recycled. More than 200 pathogenic variants in the BTD gene have been identified, causing complete or partial loss of enzyme activity and leading to profound or partial BD. Although the genotype–phenotype correlation is not fully defined, some genotypes are associated with profound forms and others with partial forms of BD. The patients with partial BD are mostly asymptomatic but symptoms may appear during stressful conditions such as infections. The patients with profound BD may present neurological problems, hearing loss, visual abnormalities, and organic aciduria, if not treated with biotin supplementation. BD is included in most newborn screening programs (NBS). Screening test relies on measurement of BTD enzyme activity in dried blood spot (DBS), followed by a plasma BTD assay and BTD molecular analysis as confirmatory test. We describe a male newborn with partial BD identified through the newborn screening program. Low BTD activity on DBS was detected; BTD molecular analysis showed the proband to be compound heterozygous for the c.1270G>C (p.Asp424His) mild known variant, and for the rare variant c.690C>G (p.Phe230Leu) previously identified by our group. In this study, we provide the biochemical and clinical characterization of a patient carrying the c.690C>G (p.Phe230Leu) variant, and our findings support a possible contribution of this variant to the partial BD phenotype. Full article
(This article belongs to the Section Genomics and Proteomics)
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32 pages, 5262 KB  
Article
Grünwald–Letnikov Fractional Ensemble with α-Specific Power Weighting for Multi-Cancer Classification
by Teerapun Saeheaw
Analytics 2026, 5(3), 37; https://doi.org/10.3390/analytics5030037 (registering DOI) - 10 Sep 2026
Abstract
Standard ensemble classifiers assign weights based on performance over a single feature space, leaving multi-scale fractional representations unexplored as a tabular augmentation strategy. This study proposes the FRAE (Fractional-order Recalibrated Adaptive Ensemble) framework, which applies Grünwald–Letnikov (GL) derivatives at four memory orders as [...] Read more.
Standard ensemble classifiers assign weights based on performance over a single feature space, leaving multi-scale fractional representations unexplored as a tabular augmentation strategy. This study proposes the FRAE (Fractional-order Recalibrated Adaptive Ensemble) framework, which applies Grünwald–Letnikov (GL) derivatives at four memory orders as tabular feature augmentation and couples each view’s memory order to its ensemble weight via an α-specific power exponent. FRAE was evaluated on three open-access cancer datasets—WAW-TACE HCC (n = 198), Ye Prostate Cancer (C1 n = 298; C2 n = 300, external), and HANCOCK HNSCC (n = 763)—against nine baselines under 5-fold stratified cross-validation, with ablation across ten configurations. FRAE ranks first by MCC in D2 (0.587 vs. CAWPE 0.563) and second in D1 and D3, with the highest sensitivity in D3 (0.766). Ablation confirms that GL feature augmentation, not weight allocation, is the primary performance driver, contributing a directionally consistent AUC increment of 0.82–1.41 percentage points across all three tasks. On the external cohort, FRAE achieves AUC = 0.8305 [95% CI: 0.7772, 0.8739], ranking first by F1 and NPV, and tied for first by MCC among ten models, though confidence intervals overlap across all model pairs. Multi-institutional prospective validation remains the necessary next step. Full article
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18 pages, 4348 KB  
Article
Production and Physicochemical and Structural Characterization of a Hydrochar Derived from Agave Leaves and Tequila Vinasse with Potential Agricultural Applications
by Dania Carolina Uvario-Macías, José Anzaldo-Hernández, Carlos Alberto Ramírez-Barragán, Fernando Santacruz-Ruvalcaba, Dulce Flores-Rentería, Juan Carlos Pizano-Andrade and Eduardo Salcedo-Pérez
Molecules 2026, 31(18), 3173; https://doi.org/10.3390/molecules31183173 (registering DOI) - 10 Sep 2026
Abstract
The generation of agro-industrial waste necessitates the search for viable, sustainable alternatives for its utilization; therefore, Hydrothermal Carbonization (HTC) is proposed as a means to transform waste into carbonaceous products that can improve soil quality. To this end, conditions in the HTC process [...] Read more.
The generation of agro-industrial waste necessitates the search for viable, sustainable alternatives for its utilization; therefore, Hydrothermal Carbonization (HTC) is proposed as a means to transform waste into carbonaceous products that can improve soil quality. To this end, conditions in the HTC process were evaluated for the production of hydrochar from tequila vinasse and Agave tequilana Weber leaves. Different reaction times (8, 12, and 16 h) and catalyst concentrations (0%, 5%, and 10%) of citric acid were evaluated at 200 °C, using fresh agave leaves and raw vinasse. The hydrochars were characterized using various instrumental analyses (XPS, FTIR, SEM-EDS, and XRF) to determine their structure, functional groups, and elemental composition. The highest yield was obtained at 8 h without a catalyst (44.6%), decreasing with increasing process time. The vinasse served effectively as an aqueous medium and natural catalyst, with its acidic pH (3.8), thereby eliminating the need for water and acid addition. With longer processing times, microspheres form within the hydrochar structure due to carbohydrate degradation. The hydrochar produced without a catalyst and with a shorter reaction time exhibited functional groups (carboxyl and hydroxyl) that enhance Cation Exchange Capacity (CEC), thereby increasing the contact surface area. Under the evaluated conditions, the HTC process is suitable for producing hydrochar from agave leaves and vinasse. Full article
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34 pages, 9660 KB  
Article
Prediction of Freeze–Thaw Damage in Shallow-Buried Bias Tunnels Using Thermal–Mechanical Modeling and Machine Learning
by Juntao Chen, Chao Qin, Jiali Ma, Jia Jiang and Yuanping Wang
Appl. Sci. 2026, 16(18), 8969; https://doi.org/10.3390/app16188969 (registering DOI) - 10 Sep 2026
Abstract
To evaluate freeze–thaw damage and asymmetric deterioration in shallow-buried bias tunnel linings in cold regions, an explainable data-driven predictive framework was developed. Guided by the underlying frost heave mechanisms, an optimal support vector machine (SVM) surrogate model was trained using 200 thermal–mechanical coupled [...] Read more.
To evaluate freeze–thaw damage and asymmetric deterioration in shallow-buried bias tunnel linings in cold regions, an explainable data-driven predictive framework was developed. Guided by the underlying frost heave mechanisms, an optimal support vector machine (SVM) surrogate model was trained using 200 thermal–mechanical coupled samples generated via Latin hypercube sampling (LHS). The model achieved high predictive accuracy, yielding an R2 exceeding 0.98 and a root-mean-square error (RMSE) of only 0.036. Using the Shapley additive explanations (SHAP) algorithm to deconstruct damage evolution mechanisms, results revealed that ambient temperature exerts a stable quasi-linear driving effect on localized tensile stress concentrations in the lining, with an equivalent deterioration gradient of approximately 0.0731 MPa/°C. Meanwhile, cumulative freeze–thaw cycles trigger a steady quantitative accumulation of lining structural deformation. Results indicate that prior to material yield, structural deterioration of tunnel linings under severe cold conditions does not manifest as an abrupt nonlinear transition, but rather as a highly stable quasi-linear accumulation. This finding clarifies the safety evolution trajectory during the early- to mid-term service stages of extreme cold tunnel linings, providing a robust quantitative basis for proactive tunnel operational early warning systems. Full article
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20 pages, 5090 KB  
Article
Experimental Study on Triaxial Mechanical Properties of Deep Carbonate Rocks Under Thermo-Hydro-Mechanical Coupling
by Huan Peng, Jian Yang, Ruoyu Yang, Ze Li, Yuntao Liu, Zefei Lyu and Yajun Cao
Energies 2026, 19(18), 4281; https://doi.org/10.3390/en19184281 (registering DOI) - 10 Sep 2026
Abstract
Global oil and gas exploration and development are gradually expanding into deep and ultra-deep formations. Deep limestone exists in a long-term multi-field coupled environment featuring high temperature, high in situ stress and high pore pressure, which brings great challenges to reservoir stimulation and [...] Read more.
Global oil and gas exploration and development are gradually expanding into deep and ultra-deep formations. Deep limestone exists in a long-term multi-field coupled environment featuring high temperature, high in situ stress and high pore pressure, which brings great challenges to reservoir stimulation and wellbore stability. To investigate the effects of confining pressure and pore pressure on limestone under high temperatures, triaxial compression tests were conducted on limestone at various temperatures (25~150 °C) using the GCTS RTR-2000 rock mechanics testing system. This paper investigates the evolution laws of strength and deformation parameters of limestone under varied temperature, confining pressure and pore pressure. The results indicate that: (1) Within the 25~150 °C range, the peak strength and elastic modulus of limestone exhibit a “decrease-then-increase” trend, with a strength rebound occurring at 150 °C driven by the “thermal expansion and compaction” effect. (2) Under a pore pressure of 50 MPa, temperature and confining pressure exert a significant coupled control effect on the mechanical properties of the rock, characterized by a critical confining pressure threshold of approximately 100–110 MPa. Below this threshold, high temperature acts as a weakening factor, whereas above it, high temperature acts as a strengthening factor and induces intense brittle failure under high pressure. (3) In the pore pressure coupling tests, the rock undergoes ductile failure as confining pressure increases at normal/room temperature, while a temperature of 100 °C strengthens the rock under high confining pressure. (4) Energy evolution analysis reveals that within the 75~125 °C range, the thermal pressurization of pore water and local thermal stresses induce massive microcracks, causing the dissipated energy to surge sharply to nearly 80%. The research findings provide a theoretical basis for wellbore stability analysis and fracturing parameter optimization in deep carbonate reservoirs. Full article
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26 pages, 6269 KB  
Article
Network Efficiency and Velocity Decay in Asymmetric Urban Corridors in Buea, Cameroon: An Empirical Calibration Baseline Towards Future AI-Integrated Traffic Control
by Bukuka Betrand Afanyu and Yoshitaka Kajita
Infrastructures 2026, 11(9), 324; https://doi.org/10.3390/infrastructures11090324 (registering DOI) - 9 Sep 2026
Abstract
Urban road networks in Sub-Saharan Africa diverge from the sensor-rich, lane-disciplined environments conventional models assume. This paper establishes an empirical baseline of network efficiency and velocity decay along the 8.0 km Mile 17 to Governor’s Roundabout corridor in Buea, Cameroon, marked by a [...] Read more.
Urban road networks in Sub-Saharan Africa diverge from the sensor-rich, lane-disciplined environments conventional models assume. This paper establishes an empirical baseline of network efficiency and velocity decay along the 8.0 km Mile 17 to Governor’s Roundabout corridor in Buea, Cameroon, marked by a 25 m/km inbound gradient, unsignalized intersections, and a taxi share of 59.55% inbound and 65.27% outbound. Fifteen-minute PCU counts were recorded at three points across three peak windows over three consecutive weekdays (1–3 April 2026), yielding 18 h of counts and 36 floating-car GPS runs. Volume-to-capacity ratios (v/c), Peak Hour Factors, and space-mean speeds were derived for both directions, with SD, coefficient of variation, and 95% confidence intervals computed to quantify sampling uncertainty. Results show near over-saturation (v/c: 0.98–1.06) at Bonduma, particularly during the afternoon outbound window. However, the 95% confidence intervals span v/c = 1.00, indicating significant uncertainty in Level of Service classifications. Mean Travel Time Ratios ranged from 1.10 to 2.04. At Bonduma in the evening, an elevated Informal Transport Disruption Factor (ITDF = 0.96) co-occurred with only moderate volume (v/c = 0.87), consistent with, though not proof of, informal-transport-related delay. Finally, the paper introduces two new indicators, the Directional Flow Asymmetry Index (DFAI) and Corridor Velocity Decay Rate (CVDR), to quantify directional imbalances that standard v/c analysis misses. Alongside the ITDF, these metrics serve as empirical calibration inputs for a future reinforcement learning traffic control framework (BACATC). Because no AI controller was built or evaluated in this study, the findings establish a quantified field baseline rather than a demonstration of AI-based control. Full article
(This article belongs to the Section Sustainable Infrastructures)
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19 pages, 1674 KB  
Article
Multivariate Genome-Wide Association Analysis Identifies Genetic Susceptibility Loci for Metabolic Syndrome in the Korean Genome and Epidemiology Study
by Dasom Kim, Junho Cha and Sungkyoung Choi
Int. J. Mol. Sci. 2026, 27(18), 8041; https://doi.org/10.3390/ijms27188041 - 9 Sep 2026
Abstract
Metabolic syndrome (MetS), characterized by a cluster of interrelated metabolic abnormalities including central obesity, elevated blood pressure, dysglycemia, hypertriglyceridemia, and reduced high-density lipoprotein cholesterol (HDL-C), substantially increases type 2 diabetes and cardiovascular disease risk. Conventional genome-wide association studies (GWASs) analyze individual traits or [...] Read more.
Metabolic syndrome (MetS), characterized by a cluster of interrelated metabolic abnormalities including central obesity, elevated blood pressure, dysglycemia, hypertriglyceridemia, and reduced high-density lipoprotein cholesterol (HDL-C), substantially increases type 2 diabetes and cardiovascular disease risk. Conventional genome-wide association studies (GWASs) analyze individual traits or a dichotomized MetS status, only partially capturing its heritability and potentially overlooking variants with shared (pleiotropic) effects across correlated traits. Here, we performed a multiple-trait GWAS using data from the Korean Genome and Epidemiology Study. Using the Korea Biobank Array (K-Chip), we analyzed a discovery cohort from the Ansan and Ansung studies (1490 cases and 3856 controls) and validated the findings in CAVAS (3620 cases and 4461 controls) and HEXA (15,257 cases and 41,807 controls) cohorts. We jointly modeled six MetS-related traits using the complementary multivariate frameworks Multiple Phenotype Association Tests and Genome-wide Efficient Mixed Model Association, alongside a baseline logistic regression. Whereas logistic regression detected 2 APOA5 variants (rs662799 and rs2075291), the multivariate analyses identified 79 significant single-nucleotide polymorphisms; all were replicated in the HEXA cohort. Functional annotation prioritized 27 high-risk variants mapping to 12 genes, whereas pathway analysis (DAVID) implicated eight Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathways related to lipid metabolism. Our findings demonstrate that multivariate analysis substantially improves the identification of pleiotropic susceptibility loci for MetS in the Korean population and indicates candidate genes for early detection and management. Full article
(This article belongs to the Special Issue Genomics of Human Disease)
38 pages, 1125 KB  
Review
Smart HVAC Control Strategies for Optimizing Thermal Comfort and Energy Efficiency in Omani Residential Buildings Under Extreme Heat Conditions
by Mohammed Abu Safaqah, Jeyaprakash Natarajan and Khalid Anwar
Buildings 2026, 16(18), 3602; https://doi.org/10.3390/buildings16183602 - 9 Sep 2026
Abstract
Heating, Ventilation, and Air Conditioning (HVAC) systems account for 60–70% of residential electricity consumption in Oman, where extreme desert climate, with temperatures regularly exceeding 45 °C create substantial cooling demands. Unlike general reviews of smart HVAC controls, this study specifically evaluates the applicability [...] Read more.
Heating, Ventilation, and Air Conditioning (HVAC) systems account for 60–70% of residential electricity consumption in Oman, where extreme desert climate, with temperatures regularly exceeding 45 °C create substantial cooling demands. Unlike general reviews of smart HVAC controls, this study specifically evaluates the applicability and performance of advanced control strategies for Omani residential buildings operating under extreme heat conditions, synthesizing evidence from international research, the Gulf Cooperation Council (GCC) region, and Oman. Based on a systematic review of peer-reviewed literature published between 2015 and 2025, this analysis examines Model Predictive Control (MPC), Deep Reinforcement Learning (DRL), Fuzzy Logic Control, and Internet of Things-based integrated approaches. International studies demonstrate that MPC strategies achieve energy savings of 16–40% compared to conventional thermostatic control by utilizing dynamic building thermal models to optimize control sequences over finite prediction horizons. DRL-based controllers achieve energy reductions of 17–23% through adaptive learning of optimal policies without requiring explicit system models, offering adaptability to dynamic occupancy patterns. Real-world implementation case studies from Oman and the GCC region—including the GUtech EcoHaus net-zero energy building and national-scale retrofit programs—demonstrate realized energy savings ranging from 25–75%, with higher savings achieved through comprehensive interventions that combine advanced controls with high-performance building envelopes. These findings suggest that substantial potential for reducing residential energy consumption while maintaining occupant thermal comfort under Oman’s extreme climatic conditions is achieved through the integration of advanced HVAC control strategies with high-performance building envelopes. Future research may address the development of occupant-centric adaptive comfort models calibrated for extreme heat conditions and context-specific control strategies that account for regional occupancy patterns and cultural preferences. Full article
21 pages, 21321 KB  
Article
Mitochondrial Genome Comparison and Phylogenetic Analysis of the Family Carabidae (Coleoptera: Adephaga)
by Jinyu Zhan, Pingzhou Zhu, Kaixuan Liu, Rongrong Shen, Hongbin Liang, Xinpu Wang and Ming Bai
Biology 2026, 15(18), 1593; https://doi.org/10.3390/biology15181593 - 9 Sep 2026
Abstract
The family Carabidae, one of the largest families within Coleoptera, represents one of the most important groups of predatory insects and bioindicators in ecosystems, playing significant roles in agricultural pest control and ecological environment assessment. However, the phylogenetic relationships within this family remain [...] Read more.
The family Carabidae, one of the largest families within Coleoptera, represents one of the most important groups of predatory insects and bioindicators in ecosystems, playing significant roles in agricultural pest control and ecological environment assessment. However, the phylogenetic relationships within this family remain poorly resolved, and publicly available mitochondrial genome data remain limited. In this study, we employed high-throughput sequencing to determine and report for the first time the complete mitogenomes of four carabid species—Poecilus fortipes (Chaudoir, 1850) and Poecilus gebleri (Dejean, 1828) from the subfamily Pterostichinae, and Pristosia nitidula (A. Morawitz, 1862) and Cephalosdrophus marinae (Lassalle & Marcilhac, 1999) from the subfamily Platyninae—as well as to resequence Carabus brandti Faldermann, 1835 from the subfamily Carabinae. Using 124 carabid mitochondrial genome sequences obtained from NCBI, this study reconstructed the phylogenetic relationships among 21 subfamilies within Carabidae. The results showed that the sizes of mitochondrial genomes ranged from 15,800 to 17,352 bp in length and contained 37 typical genes and a control region. Combined with previously reported mitogenomic data, we found all protein-coding genes (PCGs) initiated with standard start codons ATN or TTG and ended with TAN or an incomplete stop codon single T. Evolutionary rate analysis (Ka/Ks) revealed ATP8 was the fastest-evolving gene, whereas COX1 was the slowest. Except for tRNA-Ser (AGN), whose DHU arm simply formed a loop, and tRNA-Phe (C. marinae), whose TΨC loop was absent, the rest of the tRNA sequences could be folded into a typical cloverleaf secondary structure. Our results suggest that the phylogenetic position and taxonomic status of Cicindelinae remain unresolved, with alternative placements recovered depending on the dataset analyzed. The monophyly of most carabid subfamilies was confirmed, with the exception of Brachininae, Trechinae, Licininae, and Platyninae. The findings of this study provide valuable insights into carabid phylogeny. Further refinement of the phylogenetic relationships within the family can be achieved by additional nuclear markers, broader taxon sampling, and complementary phylogenomic datasets. Full article
(This article belongs to the Section Evolutionary Biology)
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Article
ALDH2 Deficiency Promotes Mammary Epithelial Stemness and Proliferative Morphogenesis Through Oxidative Stress, RANKL Induction, and Estrogen Receptor Signaling
by Zhikun Ma, Amanda B. Parris, Miles Lester, De’ja Gissendanner, Vasilis Vasiliou and Xiaohe Yang
Cells 2026, 15(18), 1632; https://doi.org/10.3390/cells15181632 - 9 Sep 2026
Abstract
Alcohol consumption is associated with increased breast cancer risk, partly due to the accumulation of toxic aldehydes like acetaldehyde, a carcinogenic byproduct of ethanol metabolism. Acetaldehyde Dehydrogenase 2 (ALDH2), a key mitochondrial enzyme, detoxifies acetaldehyde and other reactive aldehydes that drive oxidative stress, [...] Read more.
Alcohol consumption is associated with increased breast cancer risk, partly due to the accumulation of toxic aldehydes like acetaldehyde, a carcinogenic byproduct of ethanol metabolism. Acetaldehyde Dehydrogenase 2 (ALDH2), a key mitochondrial enzyme, detoxifies acetaldehyde and other reactive aldehydes that drive oxidative stress, DNA damage, and hormonal dysregulation—processes central to carcinogenesis. Although alcohol consumption has been implicated in breast cancer, the role of ALDH2 deficiency itself, in the absence of exogenous alcohol exposure, in mammary gland biology and cancer susceptibility remains unclear. Genetic variants that impair ALDH2 activity are highly prevalent in East Asian populations, where carriers of inactive ALDH2 alleles exhibit impaired aldehyde detoxification. While such individuals are more susceptible to alcohol-related cancers, the effects of ALDH2 deficiency on mammary gland development and homeostasis without alcohol exposure remain unexplored. To investigate the effects of ALDH2 deficiency on mammary proliferation and development, we utilized a C57BL/6-based ALDH2 knockout (Aldh2−/−) mouse model. Our findings revealed that Aldh2−/− mice displayed hyperproliferative mammary glands with increased epithelial cell density, ductal expansion, and increased numbers of Ki67+ cells. Flow cytometry analysis revealed expansion of luminal and basal epithelial subpopulations, accompanied by enhanced mammary epithelial stemness, as indicated by increased mammosphere formation and colony-forming efficiency. At the molecular level, ALDH2 deficiency activated oxidative stress pathways, reflected by elevated 8-OHdG, p38 MAPK, NF-κB, and Nrf2 signaling, along with DNA damage responses involving p53 and H2A.X. We also identified a novel upregulation of RANK and RANKL in Aldh2−/− mammary glands, identifying the RANK/RANKL upregulation associated with NF-κB/p38 MAPK activation and enhanced mammary stemness. Furthermore, hormonal dysregulation was observed, with a significant increase in ERα and PR expression and phosphorylation. Dysregulated ER signaling correlated with enhanced erbB3 activation and downstream signaling, including the cyclin D1–pRb-E2F1 axis. These findings suggest that ALDH2 deficiency, possibly through accumulated endogenous aldehydes, profoundly alters mammary morphogenesis, epithelial repopulation, and stemness. These effects are associated with activation of oxidative stress and DNA damage pathways, together with upregulation of RANKL, estrogen receptor and receptor tyrosine kinase signaling. This study is the first to identify ALDH2 deficiency as a novel factor associated with mammary epithelial alterations that may create a tissue state that could predispose to oncogenic transformation. Full article
(This article belongs to the Special Issue Cellular and Molecular Mechanisms of Breast Cancer)
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