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27 pages, 83265 KiB  
Article
Dynamic Stability Analysis and Optimization of Multi-Vehicle Systems in Heterogeneous Connected Traffic
by Tao Wang and Dayi Qu
Sensors 2025, 25(3), 727; https://doi.org/10.3390/s25030727 - 25 Jan 2025
Viewed by 1153
Abstract
This study investigates the stability and performance of mixed-traffic flows consisting of human-driven vehicles (HDVs), connected autonomous vehicles (CAVs), autonomous vehicles (AVs), and connected human-driven vehicles (CHVs). Recognizing the complexity introduced by multi-vehicle interactions in such heterogeneous traffic, a refined CAV car-following model [...] Read more.
This study investigates the stability and performance of mixed-traffic flows consisting of human-driven vehicles (HDVs), connected autonomous vehicles (CAVs), autonomous vehicles (AVs), and connected human-driven vehicles (CHVs). Recognizing the complexity introduced by multi-vehicle interactions in such heterogeneous traffic, a refined CAV car-following model that integrates multi-vehicle state information, including headway, weighted velocity differences, weighted acceleration, and optimal velocity memory effects from both front and rear vehicles, is introduced. Through theoretical analysis of the model’s linear and nonlinear stability, the key parameters that enhance flow stability in mixed environments are determined. Numerical simulations across braking, start-up, and ring road scenarios validate the proposed model’s efficacy, demonstrating that it can effectively suppress traffic congestion and reduce oscillations, thereby improving traffic flow stability. This work offers valuable insights into the behavior of connected vehicles within mixed traffic and highlights the potential for CAV-based strategies to enhance both safety and efficiency in future transportation systems. Full article
(This article belongs to the Section Vehicular Sensing)
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22 pages, 3435 KiB  
Article
Transmission of Cryphonectria Hypovirus 1 (CHV1) to Cryphonectria radicalis and In Vitro and In Vivo Testing of Its Potential for Use as Biocontrol Against C. parasitica
by Pedro Romon-Ochoa, Pankajini Samal, Jelena Kranjec Orlović, Alex Lewis, Caroline Gorton, Ana Pérez-Sierra, Mick Biddle and Lisa Ward
Int. J. Mol. Sci. 2024, 25(22), 12023; https://doi.org/10.3390/ijms252212023 - 8 Nov 2024
Viewed by 1641
Abstract
Cryphonectria hypovirus 1 (CHV1) is successful in controlling Cryphonectria parasitica, the causal agent of chestnut blight, but little is known regarding its transmission to other fungi, for example the European Cryphonectria radicalis. In this study, CHV1 was transmitted (circa 200,000–800,000 copies/microliter) [...] Read more.
Cryphonectria hypovirus 1 (CHV1) is successful in controlling Cryphonectria parasitica, the causal agent of chestnut blight, but little is known regarding its transmission to other fungi, for example the European Cryphonectria radicalis. In this study, CHV1 was transmitted (circa 200,000–800,000 copies/microliter) to seven C. radicalis isolates from infected C. parasitica. Reverse transmission to virus-free C. parasitica (European 74 testers collection) was achieved, although it was less successful (250–55,000 copies/µL) and was dependent on the vegetative compatibility (VC) group. In C. radicalis, the virus infection led to colony colour change from pink to white and smaller colonies, dependent on the virus concentration. The virus was concentrated in the colony edges, and vertically transmitted to 77% of conidia. However, several in vitro experiments demonstrated that C. radicalis was always outcompeted by the blight fungus, only suppressing the pathogen between its 25–50% inoculum level. It presented good secondary capture only when acting as a pioneer. Two types of in planta assays (individual and challenge inoculations) were undertaken. Cryphonectria radicalis behaved as a saprotroph, while chestnut blight fungus behaved as an aggressive pathogen, and lesions after treatment with C. radicalis were no smaller in general, only when using cut branches. Overall, the results showed that infected C. radicalis was unable to control cankers. Full article
(This article belongs to the Special Issue Biocontrol of Plant Diseases and Insect Pests)
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20 pages, 7196 KiB  
Article
Dynamic Control Method for CAV-Shared Lanes at Intersections in Mixed Traffic Flow
by Xiyuan Hu, Mengying Li and Xiancai Jiang
Sustainability 2024, 16(22), 9706; https://doi.org/10.3390/su16229706 - 7 Nov 2024
Viewed by 1774
Abstract
The existing signal control methods for mixed traffic related to connected automated vehicles (CAVs) and connected human-driven vehicles (CHVs) at intersections fail to tap the traffic potential of CAV-dedicated lanes. Accordingly, a dynamic allocation method of CAV-shared lanes is proposed, and the method [...] Read more.
The existing signal control methods for mixed traffic related to connected automated vehicles (CAVs) and connected human-driven vehicles (CHVs) at intersections fail to tap the traffic potential of CAV-dedicated lanes. Accordingly, a dynamic allocation method of CAV-shared lanes is proposed, and the method of traffic flow scheduling and CAV trajectory optimization for multilane intersections with CAV-shared lanes is constructed to improve the traffic performance. The simulation results show that the optimization strategy proposed in this study can reduce the average delay at the intersection to varying degrees compared with the control strategy, using (a) the dynamic CAV-dedicated lane allocation method and (b) the shared-phase dedicated-lane method. Although the stops of CAVs will increase, the time utilization rate of most approach lanes is considerably improved, particularly CAV-shared lanes that can effectively improve the intersection performance. Further analysis shows that the number of CAV-shared lanes is closely dependent on the CAV penetration rate. The method proposed in this study is suitable for multilane intersections with a high CAV penetration rate. Full article
(This article belongs to the Section Sustainable Transportation)
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14 pages, 2090 KiB  
Article
Regional Variability of Chestnut (Castanea sativa) Tolerance Toward Blight Disease
by Marin Ježić, Lucija Nuskern, Karla Peranić, Maja Popović, Mirna Ćurković-Perica, Ozren Mendaš, Ivan Škegro, Igor Poljak, Antonio Vidaković and Marilena Idžojtić
Plants 2024, 13(21), 3060; https://doi.org/10.3390/plants13213060 - 31 Oct 2024
Viewed by 988
Abstract
Since its introduction into Europe in the first half of the 20th century, Cryphonectria parasitica has been gradually spreading across the natural range of the sweet chestnut (Castanea sativa Mill.), infecting the trees and causing lethal bark cankers. Serendipitously, a hyperparasitic Cryphonectria [...] Read more.
Since its introduction into Europe in the first half of the 20th century, Cryphonectria parasitica has been gradually spreading across the natural range of the sweet chestnut (Castanea sativa Mill.), infecting the trees and causing lethal bark cankers. Serendipitously, a hyperparasitic Cryphonectria hypovirus 1 (CHV1), which attenuates C. parasitica virulence in combination with more tolerant European chestnut species, was able to ward off the worst effect of the disease. In North America, unfortunately, the native Castanea dentata is now functionally extinct since it occurs only as root sprouts in eastern deciduous forests where it was once dominant. In our work, we investigated changes in C. parasitica populations over time and the regional variability in chestnut populations’ tolerance toward the blight disease. While vegetative compatibility (vc) type diversity and prevalence of hypovirulence remained similar as in previous studies, in the Buje population, unlike in previous studies, we were unable to find any hypovirulent fungal strains. The most common vegetative compatibility types (vc types) were EU-1, EU-2 and EU-12. However, several rare EU-types were found, including one previously unreported: EU-46. By inoculating several C. parasitica strains on tree stems from several chestnut populations, we observed that the induced lesion size was affected by the type of inoculum (CHV1-free or CHV1-infected), genotype-related individual chestnut stem and chestnut stem population of origin-related variability. The largest lesions were induced by CHV1-free fungal isolate DOB-G: 20.13 cm2 (95% C.I. 18.10–22.15) and the smallest by CHV1-infected L14/EP713: 2.49 cm2 (95% C.I. 1.59–3.39). Surprisingly, the size of the lesions induced by other CHV1-infected strains fell somewhere in between these extremes. The size of induced lesions was dependent on the population of origin as well and ranged from 11.60 cm2 (95% C.I. 9.87–13.33) for stems from the Moslavačka gora population to 17.75 cm2 (95% C.I. 15.63–19.87) for stems from Ozalj. Full article
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19 pages, 4173 KiB  
Article
Evaluation of Chemical and Biological Products for Control of Crown Gall on Rose
by Cansu Oksel, Prabha Liyanapathiranage, Madhav Parajuli, Farhat A. Avin, Christina Jennings, Terri Simmons and Fulya Baysal-Gurel
Pathogens 2024, 13(8), 708; https://doi.org/10.3390/pathogens13080708 - 21 Aug 2024
Cited by 2 | Viewed by 1957
Abstract
Crown gall is a soil-borne bacterial disease caused by Agrobacterium tumefaciens, leading to significant economic losses in many plant species. For the assessment of the biological and chemical products on crown gall, each plant’s crown region and roots were wounded, and then [...] Read more.
Crown gall is a soil-borne bacterial disease caused by Agrobacterium tumefaciens, leading to significant economic losses in many plant species. For the assessment of the biological and chemical products on crown gall, each plant’s crown region and roots were wounded, and then were dipped into their respective treatments. After the treatments, the plants were inoculated with a suspension of pathogenic A. tumefaciens isolate FBG1034 and maintained in a greenhouse for six months to assess them for gall formation. A quantitative real-time PCR assay was performed to quantify the A. tumefaciens using the chvE gene. Biological products such as the Agrobacterium radiobacter strain K1026, and strains 1 and 2, resulted in the lowest average root gall diameter and significantly reduced the crown gall diameter to stem diameter ratio, and the chemical product copper octanoate reduced the number of crown and root galls as well as the crown and root gall diameter compared to the inoculated, non-treated control. Moreover, both the A. radiobacter strain K1026 and strain 1 treatments resulted in an approximately 85% and 65% reduction in crown and root gall incidence, respectively, in both of the trials compared to the inoculated, non-treated plants. The findings of this study indicate that the use of biological and chemical products could help to suppress crown and root gall disease in rose plants. Full article
(This article belongs to the Section Bacterial Pathogens)
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14 pages, 2696 KiB  
Article
New Detection Methods for Cryphonectria Hypovirus 1 (CHV1) through SYBR Green-Based Real-Time PCR and Loop-Mediated Isothermal Amplification (LAMP)
by Ali Çelik, Deniz Çakar, Sibel Derviş, Ali Ferhan Morca, Seçil Akıllı Şimşek, Pedro Romon-Ochoa and Göksel Özer
Viruses 2024, 16(8), 1203; https://doi.org/10.3390/v16081203 - 26 Jul 2024
Cited by 2 | Viewed by 1936
Abstract
Some mycoviruses can be considered as effective biocontrol agents, mitigating the impact of phytopathogenic fungi and consequently reducing disease outbreaks while promoting plant health. Cryphonectria parasitica, the causal agent of chestnut blight and a highly destructive pathogen, experienced a notable decrease in [...] Read more.
Some mycoviruses can be considered as effective biocontrol agents, mitigating the impact of phytopathogenic fungi and consequently reducing disease outbreaks while promoting plant health. Cryphonectria parasitica, the causal agent of chestnut blight and a highly destructive pathogen, experienced a notable decrease in its virulence with the identification of cryphonectria hypovirus 1 (CHV1), a naturally occurring biocontrol agent. In this study, two innovative diagnostic protocols designed for the accurate and efficient detection of CHV1 are introduced. The ORF A and ORF B regions of CHV1 are targeted by these techniques, which employ colorimetric loop-mediated isothermal amplification (LAMP) with 2 Colorimetric LAMP Master Mix and real-time quantitative PCR (qPCR) with SYBR Green chemistry, respectively. The LAMP assay presents a discernible color transition, changing from pink to yellow after a 35 min incubation period. Comparative analysis, when assessed against two established reverse transcription-PCR (RT-PCR) techniques, reveals a significant enhancement in sensitivity for both the LAMP approach, which offers a tenfold increase, and the qPCR method, which showcases a remarkable 100-fold sensitivity improvement. Throughout the comparison phase, it was evident that the RT-PCR, LAMP, and qPCR procedures displayed superior performance compared to the Bavendamm test, relying on phenol oxidase activity, effectively distinguishing hypovirulent strains. Consequently, this study introduces two pioneer diagnostic assays for highly sensitive CHV1 detection, representing a substantial advancement in the realm of CHV1 surveillance techniques. These methodologies hold significant promise for enhancing research endeavors in the domain of the biological control of C. parasitica. Full article
(This article belongs to the Special Issue Advances in Plant Virus/Viroid Detection and Identification Methods)
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14 pages, 4492 KiB  
Article
Identification of Mycoviruses in the Pathogens of Fragrant Pear Valsa Canker from Xinjiang in China
by Chenguang Zhang, Xiaoya Zheng, Zhanjiang Tie, Hui Xi, Mai Shi, Yanjun Ma, Wenbin Chen, Yingjie Mi, Rui Yang, Sifeng Zhao and Xuekun Zhang
Viruses 2024, 16(3), 355; https://doi.org/10.3390/v16030355 - 25 Feb 2024
Cited by 1 | Viewed by 1844
Abstract
As a common disease, canker seriously affects the yield and quality of fragrant pear due to the lack of effective control measures. Some fungi have been reported to harbor rich reservoirs of viral resources, and some mycoviruses can be used as biocontrol agents [...] Read more.
As a common disease, canker seriously affects the yield and quality of fragrant pear due to the lack of effective control measures. Some fungi have been reported to harbor rich reservoirs of viral resources, and some mycoviruses can be used as biocontrol agents against plant diseases. In this study, 199 isolates were obtained from diseased branches of fragrant pear in the main production areas of Xinjiang. Among them, 134 belonged to Valsa spp., identified using morphological and molecular biological techniques, in which V. mali was the dominant species. The mycoviruses in Valsa spp. were further identified using metatranscriptomic sequencing and RT-PCR. The results revealed that a total of seven mycoviruses were identified, belonging to Botourmiaviridae, Endornaviridae, Fusariviridae, Hypoviridae, Mitoviridae, and Narnaviridae, among which Phomopsis longicolla hypovirus (PlHV) was dominant in all the sample collection regions. The Cryphonectria hypovirus 3-XJ1 (CHV3-XJ1), Botourmiaviridae sp.-XJ1 (BVsp-XJ1), and Fusariviridae sp.-XJ1 (Fvsp-XJ1) were new mycoviruses discovered within the Valsa spp. More importantly, compared with those in the virus-free Valsa spp. strain, the growth rate and virulence of the VN-5 strain co-infected with PlHV and CHV3-XJ1 were reduced by 59% and 75%, respectively, and the growth rate and virulence of the VN-34 strain infected with PlHV were reduced by 42% and 55%, respectively. On the other hand, the horizontal transmission efficiency of PlHV decreased when PlHV was co-infected with CHV3-XJ1, indicating that PlHV and CHV3-XJ1 were antagonistic. In summary, the mycoviruses in Valsa spp. were identified in Xinjiang for the first time, and three of them were newly discovered mycoviruses, with two strains yielding good results. These results will offer potential biocontrol resources for managing pear canker disease and provide a theoretical basis for the control of fruit tree Valsa canker disease. Full article
(This article belongs to the Collection Mycoviruses)
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20 pages, 13953 KiB  
Article
A Detailed Comparative Analysis of You Only Look Once-Based Architectures for the Detection of Personal Protective Equipment on Construction Sites
by Abdelrahman Elesawy, Eslam Mohammed Abdelkader and Hesham Osman
Eng 2024, 5(1), 347-366; https://doi.org/10.3390/eng5010019 - 21 Feb 2024
Cited by 7 | Viewed by 3990
Abstract
For practitioners and researchers, construction safety is a major concern. The construction industry is among the world’s most dangerous industries, with a high number of accidents and fatalities. Workers in the construction industry are still exposed to safety risks even after conducting risk [...] Read more.
For practitioners and researchers, construction safety is a major concern. The construction industry is among the world’s most dangerous industries, with a high number of accidents and fatalities. Workers in the construction industry are still exposed to safety risks even after conducting risk assessments. The use of personal protective equipment (PPE) is essential to help reduce the risks to laborers and engineers on construction sites. Developments in the field of computer vision and data analytics, especially using deep learning algorithms, have the potential to address this challenge in construction. This study developed several models to enhance the safety compliance of construction workers with respect to PPE. Through the utilization of convolutional neural networks (CNNs) and the application of transfer learning principles, this study builds upon the foundational YOLO-v5 and YOLO-v8 architectures. The resultant model excels in predicting six key categories: person, vest, and four helmet colors. The developed model is validated using a high-quality CHV benchmark dataset from the literature. The dataset is composed of 1330 images and manages to account for a real construction site background, different gestures, varied angles and distances, and multi-PPE. Consequently, the comparison among the ten models of YOLO-v5 (You Only Look Once) and five models of YOLO-v8 showed that YOLO-v5x6’s running speed in analysis was faster than that of YOLO-v5l; however, YOLO-v8m stands out for its higher precision and accuracy. Furthermore, YOLOv8m has the best mean average precision (mAP), with a score of 92.30%, and the best F1 score, at 0.89. Significantly, the attained mAP reflects a substantial 6.64% advancement over previous related research studies. Accordingly, the proposed research has the capability of reducing and preventing construction accidents that can result in death or serious injury. Full article
(This article belongs to the Section Chemical, Civil and Environmental Engineering)
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11 pages, 1576 KiB  
Article
Predominance of Canine Parainfluenza Virus and Mycoplasma in Canine Infectious Respiratory Disease Complex in Dogs
by Aurelle Yondo, Allen A. Kalantari, Ingrid Fernandez-Marrero, Amy McKinney, Hemant K. Naikare and Binu T. Velayudhan
Pathogens 2023, 12(11), 1356; https://doi.org/10.3390/pathogens12111356 - 15 Nov 2023
Cited by 7 | Viewed by 3900
Abstract
Canine infectious respiratory disease complex (CIRDC) is caused by different viruses and bacteria. Viruses associated with CIRDC include canine adenovirus type 2 (CAV-2), canine distemper virus (CDV), canine influenza virus (CIV), canine herpesvirus type 1 (CHV-1), canine respiratory coronavirus (CRCoV), and canine parainfluenza [...] Read more.
Canine infectious respiratory disease complex (CIRDC) is caused by different viruses and bacteria. Viruses associated with CIRDC include canine adenovirus type 2 (CAV-2), canine distemper virus (CDV), canine influenza virus (CIV), canine herpesvirus type 1 (CHV-1), canine respiratory coronavirus (CRCoV), and canine parainfluenza virus (CPIV). Bacteria associated with CIRDC include Bordetella bronchiseptica, Streptococcus equi subspecies zooepidemicus (S. zooepidemicus), and Mycoplasma spp. The present study examined the prevalence of CIRDC pathogens in specimens received by a Veterinary Diagnostic Laboratory in Georgia, USA., from 2018 to 2022. Out of 459 cases, viral agents were detected in 34% of cases and bacterial agents were detected in 58% of cases. A single pathogen was detected in 31% of cases, while two or more pathogens were identified in 24% of cases. The percentages of viral agents identified were CAV-2 (4%), CDV (3%), CPIV (16%), CRCoV (7%), and CIV (2%). The percentages of bacterial agents were B. bronchiseptica (10%), Mycoplasma canis (24%), Mycoplasma cynos (21%), and S. zooepidemicus (2%). Over the five-year period, the positive cases ranged from 2–4% for CAV-2, 1–7% for CDV, 1–4% for CHV-1, 9–22% for CPIV, 4–13% for CRCoV, and 1–4% for CIV. Overall, the most prevalent pathogens associated with CIRDC were CPIV, M. canis, and M. cynos. Full article
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13 pages, 2011 KiB  
Article
Cryphonectria parasitica Detections in England, Jersey, and Guernsey during 2020–2023 Reveal Newly Affected Areas and Infections by the CHV1 Mycovirus
by Pedro Romon-Ochoa, Pankajini Samal, Caroline Gorton, Alex Lewis, Ruth Chitty, Amy Eacock, Elzbieta Krzywinska, Michael Crampton, Ana Pérez-Sierra, Mick Biddle, Ben Jones and Lisa Ward
J. Fungi 2023, 9(10), 1036; https://doi.org/10.3390/jof9101036 - 20 Oct 2023
Cited by 2 | Viewed by 1925
Abstract
In England, Cryphonectria parasitica was detected for the first time in 2011 in a nursery and in 2016 in the wider environment. Surveys between 2017 and 2020 identified the disease at different sites in Berkshire, Buckinghamshire, Cornwall, Derbyshire, Devon, Dorset, London, West Sussex, [...] Read more.
In England, Cryphonectria parasitica was detected for the first time in 2011 in a nursery and in 2016 in the wider environment. Surveys between 2017 and 2020 identified the disease at different sites in Berkshire, Buckinghamshire, Cornwall, Derbyshire, Devon, Dorset, London, West Sussex, and the island of Jersey, while the present study comprises the results of the 2020–2023 survey with findings in Derbyshire, Devon, Kent, Nottinghamshire, Herefordshire, Leicestershire, London, West Sussex, and the islands of Jersey and Guernsey. A total of 226 suspected samples were collected from 72 surveyed sites, as far north as Edinburgh and as far west as Plymouth (both of which were negative), and 112 samples tested positive by real-time PCR and isolation from 35 sites. The 112 isolates were tested for the vegetative compatibility group (VCG), mating type, and Cryphonectria hypovirus 1 (CHV1). Twelve VCGs were identified, with two of them (EU-5 and EU-22) being the first records in the UK. Both mating types were present (37% MAT-1 and 63% MAT-2), but only one mating type was present per site and VCG, and perithecia were never observed. Cryphonectria hypovirus 1 (CHV1), consistently subtype-I haplotype E-5, was detected in three isolates at a low concentration (5.9, 21.1, and 33.0 ng/µL) from locations in London, Nottinghamshire, and Devon. Full article
(This article belongs to the Special Issue Fungal Plant Pathogens)
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17 pages, 2355 KiB  
Article
Benefits of Chlorella vulgaris against Cadmium Chloride-Induced Hepatic and Renal Toxicities via Restoring the Cellular Redox Homeostasis and Modulating Nrf2 and NF-KB Pathways in Male Rats
by Mayada R. Farag, Mahmoud Alagawany, Eman A. A. Mahdy, Enas El-Hady, Shimaa M. Abou-Zeid, Suzan A. Mawed, Mahmoud M. Azzam, Giuseppe Crescenzo and Azza M. A. Abo-Elmaaty
Biomedicines 2023, 11(9), 2414; https://doi.org/10.3390/biomedicines11092414 - 29 Aug 2023
Cited by 10 | Viewed by 3044
Abstract
In our life scenarios, we are involuntarily exposed to many heavy metals that are well-distributed in water, food, and air and have adverse health effects on animals and humans. Cadmium (Cd) is one of the most toxic 10 chemicals reported by The World [...] Read more.
In our life scenarios, we are involuntarily exposed to many heavy metals that are well-distributed in water, food, and air and have adverse health effects on animals and humans. Cadmium (Cd) is one of the most toxic 10 chemicals reported by The World Health Organization (WHO), affecting organ structure and function. In our present study, we use one of the green microalga Chlorella vulgaris (ChV, 500 mg/kg body weight) to investigate the beneficial effects against CdCl2-induced hepato-renal toxicity (Cd, 2 mg/kg body weight for 10 days) on adult male Sprague-Dawley rats. In brief, 40 adult male rats were divided into four groups (n = 10); Control, ChV, Cd, and Cd + ChV. Cadmium alters liver and kidney architecture and disturbs the cellular signaling cascade, resulting in loss of body weight, alteration of the hematological picture, and increased ALT, AST, ALP, and urea in the blood serum. Moreover, cadmium puts hepatic and renal cells under oxidative stress due to the up-regulation of lipid peroxidation resulting in a significant increase in the IgG level as an innate immunity protection and induction of the pro-inflammatory cytokines (IL-1β and TNF-α) that causes hepatic hemorrhage, irregular hepatocytes in the liver and focal glomeruli swelling and proximal tubular degeneration in the kidney. ChV additive to CdCl2, could organize the protein translation process via NF-kB/Nrf2 pathways to prevent oxidative damage by maintaining cellular redox homeostasis and improving the survival of and tolerance of cells against oxidative damage caused by cadmium. The present study shed light on the anti-inflammatory and antioxidative properties of Chlorella vulgaris that suppress the toxicity influence of CdCl2. Full article
(This article belongs to the Section Cell Biology and Pathology)
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14 pages, 7736 KiB  
Article
Hierarchical Surface Structures and Large-Area Nanoscale Gratings in As2S3 and As2Se3 Films Irradiated with Femtosecond Laser Pulses
by Dmitrii Shuleiko, Stanislav Zabotnov, Olga Sokolovskaya, Maksim Poliakov, Lidiya Volkova, Tatiana Kunkel, Evgeny Kuzmin, Pavel Danilov, Sergey Kudryashov, Dmitrii Pepelayev, Sergey Kozyukhin, Leonid Golovan and Pavel Kashkarov
Materials 2023, 16(13), 4524; https://doi.org/10.3390/ma16134524 - 22 Jun 2023
Cited by 5 | Viewed by 1592
Abstract
Chalcogenide vitreous semiconductors (ChVSs) find application in rewritable optical memory storage and optically switchable infrared photonic devices due to the possibility of fast and reversible phase transitions, as well as high refractive index and transmission in the near- and mid-infrared spectral range. Formed [...] Read more.
Chalcogenide vitreous semiconductors (ChVSs) find application in rewritable optical memory storage and optically switchable infrared photonic devices due to the possibility of fast and reversible phase transitions, as well as high refractive index and transmission in the near- and mid-infrared spectral range. Formed on such materials, laser-induced periodic surface structures (LIPSSs), open wide prospects for increasing information storage capacity and create polarization-sensitive optical elements of infrared photonics. In the present work, a possibility to produce LIPSSs under femtosecond laser irradiation (pulse duration 300 fs, wavelength 515 nm, repetition rate up to 2 kHz, pulse energy ranged 0.03 to 0.5 μJ) is demonstrated on a large (up to 5 × 5 mm2) area of arsenic sulfide (As2S3) and arsenic selenide (As2Se3) ChVS films. Scanning electron and atomic force microscopy revealed that LIPSSs with various periods (170–490 nm) and orientations can coexist within the same irradiated region as a hierarchical structure, resulting from the interference of various plasmon polariton modes generated under intense photoexcitation of nonequilibrium carriers within the film. The depth of the structures varied from 30 to 100 nm. The periods and orientations of the formed LIPSSs were numerically simulated using the Sipe–Drude approach. A good agreement of the calculations with the experimental data was achieved. Full article
(This article belongs to the Special Issue Synthesis and Characterization of Semiconductor Nanomaterials)
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13 pages, 2503 KiB  
Article
Temperature Effects on the Cryphonectria hypovirus 1 Accumulation and Recovery within Its Fungal Host, the Chestnut Blight Pathogen Cryphonectria parasitica
by Pedro Romon-Ochoa, Olivia Smith, Alex Lewis, Quirin Kupper, Wajeeha Shamsi, Daniel Rigling, Ana Pérez-Sierra and Lisa Ward
Viruses 2023, 15(6), 1260; https://doi.org/10.3390/v15061260 - 27 May 2023
Cited by 7 | Viewed by 2388
Abstract
Biological control of Cryphonectria parasitica fungus, the causal agent of chestnut blight, by virus infection (hypovirulence) is an effective control strategy against chestnut blight in Europe and some parts of North America. The most studied mycovirus is the Cryphonectria hypovirus 1 (CHV1) type [...] Read more.
Biological control of Cryphonectria parasitica fungus, the causal agent of chestnut blight, by virus infection (hypovirulence) is an effective control strategy against chestnut blight in Europe and some parts of North America. The most studied mycovirus is the Cryphonectria hypovirus 1 (CHV1) type species of the Hypoviridae family. In this study, the CHV1 virus was studied within some highly infected British isolates of Cryphonectria parasitica, gained in the past through co-culture transmissions. The effects of six temperatures (5–30 °C, in 5 °C steps) on six infected isolates (three with viral strain E-5, and other three with viral strain L-18) and their respective negative non-infected controls, three isogenic virulent fungal isolates, were examined. Experiments were performed with the nine isolate types with three replicates on potato dextrose agar (PDA) with cellophane sheets per isolate and temperature. A recently developed rapid, specific, quantitative reverse transcription PCR (RT-qPCR) screening method was used. This enabled quantifying the concentration (nanograms per microliter or copy numbers) of the virus within each isolate repetition. The presence of the virus had a significant negative effect between 20 and 25 °C on the C. parasitica growth rate, which was anyway highly influenced by and positively correlated with the temperature. The temperature clearly determined the virus accumulation and its recovery from cold or heat, and the virus optimum temperature was estimated at 15–25 °C. Full article
(This article belongs to the Collection Mycoviruses)
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18 pages, 2087 KiB  
Article
Deciphering Chitosan–Host Plant Interaction in Esca Disease
by Laura Martín, Agustín Millán, Francisco Javier Castaño and Florence Fontaine
Agronomy 2023, 13(5), 1290; https://doi.org/10.3390/agronomy13051290 - 30 Apr 2023
Cited by 2 | Viewed by 2064
Abstract
The production of wine and table grapes is hampered by Phaeomoniella chlamydospora, a fungus related to Petri diseases and Esca, two of the major grapevine trunk diseases causing the death of vines all over the world. This study analyses the effect of a [...] Read more.
The production of wine and table grapes is hampered by Phaeomoniella chlamydospora, a fungus related to Petri diseases and Esca, two of the major grapevine trunk diseases causing the death of vines all over the world. This study analyses the effect of a commercial-based substance (chitosan hydrochloride 2.5%) on grapevine–P. chlamydospore interaction. Two experimental scenarios were evaluated: (i) root application in a greenhouse-plant model system and (ii) foliar application in an open-field environment (Tempranillo grape cultivar). Vascular necrosis and pathogen recovery were reduced after chitosan application. The treatment increased root development and the flavonoid index. On open-field application, the treatment did not significantly help decrease the expression of the foliar symptoms of Esca. In symptomatic leaves, the results revealed a lower overexpression of defence-related genes (Chit 1b, CHV5, STS and PR6) in plants treated with chitosan than in nontreated vines. Altogether, this study attempts to provide a first insight into the potential role of chitosan hydrochloride in the treatment of P. chlamydospora and the interaction on the control of the Esca–pathosystem complex. Differences were found between the root and foliar spraying modes of action. Full article
(This article belongs to the Special Issue Research on Fungal and Oomycete Crop Diseases)
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13 pages, 2904 KiB  
Article
Various Population Structures of Cryphonectria parasitica in Cáceres (Spain) Determine the Feasibility of the Biological Control of Chestnut Blight with Hypovirulent Strains
by María del Carmen Rodríguez-Molina, María Blanca García-García, María Dolores Osuna, Eugénia Gouveia and Paula Serrano-Pérez
Agronomy 2023, 13(5), 1208; https://doi.org/10.3390/agronomy13051208 - 25 Apr 2023
Cited by 3 | Viewed by 2539
Abstract
Chestnut blight, caused by Cryphonectria parasitica, is a severe disease that may be biologically controlled by the use of hypovirulent strains, but the diversity of the pathogen population affects biocontrol feasibility. Villuercas–Ibores–Jara, the Jerte Valley and La Vera are the main chestnut [...] Read more.
Chestnut blight, caused by Cryphonectria parasitica, is a severe disease that may be biologically controlled by the use of hypovirulent strains, but the diversity of the pathogen population affects biocontrol feasibility. Villuercas–Ibores–Jara, the Jerte Valley and La Vera are the main chestnut production districts in Cáceres (central-western Spain). The purpose of this study is to determine the Vegetative Compatibility Groups (VCGs) and mating types in these districts and to identify hypovirulent isolates to be used in biological control. The VCGs were determined by the merging/barrage response; PCR tests were used for the mating type determination and CHV-1 hypovirus detection. In total, 40 sites were surveyed and 269 isolates were obtained, most of them (227) from the Villuercas–Ibores–Jara district, where EU11 was the predominant VCG (88.1%) with EU1 (6.6%) and EU12 (4.4%) being also present. In the Jerte Valley and La Vera, EU1 (61.9%), EU11 (11.9%) and EU12 (11.9%) were the predominant VCGs. Both mating types were detected (48% MAT-1; 50% MAT-2) and in general, only one mating type was found in each site. The presence of Cryphonectria hypovirus 1 (CHV-1), subtype I, was identified in only one isolate (VCG EU11) from Villuercas–Ibores–Jara. The characteristics of the C. parasitica population in this district and the occurrence of CHV-1 hypovirus support the potential of successful biological control in Villuercas–Ibores–Jara using hypovirulent strains, while in the Jerte Valley and La Vera only preventive measures are recommended. Full article
(This article belongs to the Special Issue Research on Fungal and Oomycete Crop Diseases)
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