Search Results (907)

Chitosan, a chitin-derived biopolymer, is widely used in agriculture and food preservation. Fungal-derived chitosan offers a sustainable alternative to crustacean sources, and Ganoderma lucidum represents a promising source of this functional material. This study characterized fungal chitosan (F.Cs) extracted from G. lucidum cell-wall chitin by FT-IR, molecular weight, viscosity, and degree of deacetylation. Its antimicrobial activity was evaluated in vitro, and its preservative and disease control efficacy against Monilinia fructicola on postharvest apples was compared to commercial chitosan (C.Cs). DNA/protein leakage of the studied FGs and C.Cs were investigated to reveal the antimicrobial mechanisms. In particular, F.Cs exhibited promising in vitro antimicrobial activity, with MIC/MFC values of 0.75/0.75 mg/mL against M. fructicola and 0.75/1.5 mg/mL against Botrytis cinerea, compared to C.Cs. In addition, F.Cs induced greater membrane damage in M. fructicola than C.Cs, as evidenced by higher DNA leakage (24% vs. 13%) and more pronounced protein leakage (102% vs. 98%). In vivo assay demonstrated that F.Cs formed an effective protective coating layer, reducing fruit moisture loss, preserving firmness s, and significantly limiting M. fructicola-induced decay compared to C.Cs. Particularly, F.Cs (1.5%) were most effective, reducing disease incidence to 12.5% (preventive) and 20.8% (curative), with decay rates of 18 and 31%, respectively. C.Cs (1.5%) provided moderate protection, with disease incidences of 37.5 and 43.7% in preventive and curative treatments, respectively. These results demonstrate the superior efficacy of F.Cs over C.Cs in preserving apple quality and enhancing resistance to M. fructicola, highlighting the potential of G. lucidum-derived chitosan as a sustainable, multifunctional biopolymer for postharvest disease control and fruit quality preservation. Full article

Botrytis cinerea, the causal agent of gray mold or Botrytis rot on many vegetable and fruit crops worldwide, is ranked among the main limiting factors for strawberry production, being able to strongly compromise the quality, shelf life, and commercial value of fruit. UV-C is considered an environmentally friendly strategy for postharvest protection for several commodities. In this regard, this research evaluated the performance of short-wavelength UV-C radiation in reducing postharvest Botrytis decay, extending or maintaining the shelf life and quality of strawberry fruit, and detecting possible negative effects. The topic is of growing interest, as it falls within the strategic priorities of so-called “Green Technologies” to pursue a sustainable agriculture and safe food supply by minimizing fungicide use as much as possible. UV-C exposure (at a rate of 1428 J m⁻²) by means of a UV-C lamp (15 W) at a source distance of 25 cm for just 1 min provided significant reductions (from 41 up to almost 80%) depending on the artificial or natural decay pressure of gray mold caused by B. cinerea on strawberry fruit without phytotoxic effects. Analyses performed under both refrigerated and room-temperature storage conditions at different day intervals showed that postharvest UV-C does not significantly affect key chemical parameters, including the ascorbic acid content, total sugars, pH, and titratable acidity of strawberry fruit. Thus, UV-C exposure for a brief time, especially if combined with a low temperature, can be effectively considered for sustainable protection of strawberry fruit at the postharvest stage, providing a theoretical basis for further elucidation of the action modes for this and other targets, and potential large-scale application. Full article

Gray mold caused by Botrytis cinerea severely limits the postharvest quality of rose, but the contribution of ATP-binding cassette (ABC) transporters to rose defense remains unclear. Here, we identified 185 RcABC genes in the Rosa chinensis genome and classified them into eight subfamilies, with RcABCG as the largest subfamily. DESeq2-based RNA-seq analysis identified 13 significantly upregulated RcABC genes in response to B. cinerea infection at 48 hpi, nine of which belonged to the RcABCG subfamily. At 48 hpi, the log₂ fold changes of these induced genes ranged from 1.34 to 7.98, and RcABCG5, RcABCG50, RcABCG59, and RcABCG60 were selected for functional analysis. Further phylogenetic, gene-structure, and promoter analyses showed that several full-size RcABCG members were closely related to previously reported defense-associated ABCG transporters and harbored predicted GA-, MeJA-, and ABA-responsive cis-elements. Virus-induced gene silencing reduced the relative transcript levels of RcABCG5, RcABCG50, RcABCG59, and RcABCG60 to 22.8%, 17.9%, 35.2%, and 27.5% of the TRV-GFP control, respectively. Mean lesion area increased from 39.27 mm² in TRV-GFP discs to 44.96, 46.95, and 43.23 mm² in RcABCG5-, RcABCG50-, and RcABCG59-silenced discs, respectively, whereas no significant lesion increase was observed in RcABCG60-silenced discs. Together, these results establish a genome-wide framework for defense-related ABC transporters in rose and identify RcABCG5/50/59 as candidate genes associated with gray mold resistance under VIGS conditions. Full article

Valorizing agro-industrial by-products within a circular bioeconomy provides sustainable alternatives to synthetic pesticides. This study evaluated a coffee production waste (CPW) aqueous extract, obtained via subcritical water extraction, as a multifunctional biopesticide. We assessed its chemical profile, antifungal and insecticidal efficacy, ecotoxicology, allelopathy, and biochemical phytotoxicity. HPLC-DAD-MS revealed high levels of caffeine (12.9 mg/g DM), trigonelline (10.8 mg/g DM), and chlorogenic acids (~8.5 mg/g DM). It demonstrated broad in vitro antifungal activity, inhibiting Botrytis cinerea mycelial growth (84.0%) and conidial germination (98.1%). In vivo, CPW reduced apple gray mold severity to 34.9%, though in planta protection on tomato was partial. The extract reduced Halyomorpha halys egg hatching to 33.0% and increased nymphal mortality to 49.0% via symbiotic disruption, without harming its parasitoid Trissolcus japonicus. However, high acute mortality in the pollinator Osmia bicornis highlights the need for risk mitigation. Crucially, CPW showed negligible phytotoxicity on crops but selectively reduced weed germination by up to 25%, supported biochemically by its non-inhibition of plant defense CYP74 enzymes. In conclusion, CPW extract is a promising bioactive candidate for sustainable crop protection, requiring formulation optimization to enhance field safety and performance. Full article

While sucrose chaptalization is commonly used in persimmon wine production to achieve adequate fermentable sugar levels, the fermentation suitability of a persimmon substrate modified by artificial botrytization has not been adequately investigated. In this study, persimmon must obtained from Botrytis cinerea-treated fruit and a sucrose-chaptalized control were fermented using the same yeast (Saccharomyces cerevisiae Fermivin) and temperature (20 °C) conditions. The noble rot-treated group displayed gradual changes in appearance during storage and faster alcohol production and reducing sugar depletion during fermentation compared with the control. Despite lower initial soluble solids (21.50 °Brix) compared with the control (23.00 °Brix), the noble rot-treated group achieved a higher final alcohol content (11.60% vs. 8.80%) within a shorter fermentation period (9 vs. 16 days). These findings suggest that artificial botrytization may serve as a distinct pre-fermentation treatment in persimmon wine production compared with simple sucrose chaptalization. However, further studies are needed to elucidate the compositional and metabolic factors underlying these differences. Full article

Salvia somalensis Vatke is a source of specialized metabolites with potential biological and agrochemical applications. Previous studies on the dichloromethane plant surface extract demonstrated strong antifungal activity associated with abietane diterpenoids. Building on these findings, the present study aimed to characterize the methanolic extract of S. somalensis and evaluate its antifungal potential against major phytopathogenic fungi, with the broader goal of exploring the extract as a sustainable source of antifungal metabolites for crop protection. LC-MS analysis of the methanolic extract revealed a diverse phytochemical profile comprising phenolic acids, including caffeic acid, ferulic acid, and rosmarinic acid, as well as abietane-type diterpenoids such as carnosol, rosmanol, and carnosic acid. Quantitative analysis showed that carnosic acid was present only at low levels (0.09% w/w of fresh biomass). The extract exhibited antifungal activity against Botrytis cinerea, Colletotrichum coccodes, Fusarium oxysporum, Rhizoctonia solani, and Sclerotinia sclerotiorum. More than 80% inhibition of mycelial growth was observed against B. cinerea and C. coccodes at 1000 μg/mL. In addition, as in vitro cultivation of this species has not previously been explored, micropropagated plants and callus culture were established. Phytochemical profiling revealed distinct chemical compositions in the in vitro biomass. Extracts obtained from micropropagated plants inhibited mycelial growth of the tested phytopathogens by 60–70% at 1000 μg/mL, except for F. oxysporum, which showed 35.29% inhibition at the same concentration. Collectively, these findings highlight S. somalensis as a source of bioactive metabolites with antifungal potential. Full article

With growing global recognition of the nutritional value of blueberries, their cultivation has expanded significantly across various regions. However, gray mold disease, caused by Botrytis cinerea, remains a major challenge in postharvest storage and transportation. In this study, two strains—Trichoderma asperellum BBR–A and B. cinerea BC7–1—were isolated and identified from the blueberry rhizosphere and diseased leaves. Co-culture assays demonstrated that BBR–A exhibits potent antagonistic activity, rapidly suppressing the growth of the pathogen BC7–1 through mycoparasitic behaviors, including hyphal coiling, penetration, and degradation. Transcriptomic analysis revealed that upon interaction with BC7–1, BBR–A undergoes extensive reprogramming of carbon metabolism, with coordinated upregulation of genes encoding degradative enzymes, transporters, and stress-related proteins. Congo red staining and enzymatic activity assays further confirmed the enhanced secretion of extracellular enzymes and the increased cell wall-degrading capacity of BBR–A. On detached blueberry leaves, seedlings, and fruits, BBR–A treatment significantly delayed lesion expansion and reduced disease severity. Metabolomic profiling further demonstrated that BBR–A induces the marked accumulation of phenolic compounds, polyamines, and other antioxidant- and immunity-related metabolites in blueberry leaves, thereby maintaining host redox homeostasis and enhancing stress resilience. Collectively, these findings indicate that T. asperellum BBR–A effectively suppresses B. cinerea through multiple mechanisms, including antagonism, mycoparasitism, metabolic regulation, and the induction of plant defense responses, highlighting its strong potential for development as a biocontrol agent against blueberry gray mold. Full article

Ethylene response factors (ERFs) are transcription factors specific to plants that serve critical functions in various aspects of plant growth, development, and responses to environmental stressors. Despite the significance of these factors, the specific mechanisms by which mulberry ERFs interact with and respond to the pathogenic fungus Botrytis cinerea have not yet been fully elucidated. This study focuses on the isolation of a particular ERF transcription factor, known as MnERF/ABR1, which is localized in the cell nucleus and is derived from mulberry. Overexpression of MnERF/ABR1 in Arabidopsis or transient overexpression of MnERF/ABR1 in mulberry leaves can significantly enhance its resistance to B. cinerea. Our results suggest that empty vector control (CK) has higher levels of malondialdehyde (MDA), a marker of oxidative stress, compared to overexpression lines. In contrast, the catalase (CAT) activity of overexpression lines was higher than that of CK plants. Furthermore, staining with 3,3′-diaminobenzidine (DAB) and nitro blue tetrazolium (NBT) indicated that the resistance to B. cinerea was more pronounced in plants with overexpression than in those of the CK plants. These findings uncovered the molecular regulatory pathway involving MnERF/ABR1 in response to B. cinerea and established a basis for the development of disease-resistant mulberry varieties through genome editing. Full article

Potato (Solanum tuberosum L.) is a vital food security and cash crop in Eritrea, yet bacterial and fungal pathogens responsible for 15–30% yield losses remain molecularly uncharacterized across its production systems. Here, we present the first nationwide amplicon-based metagenomic survey of potato pathogen communities, sampling 81 farms across 14 sub-regions spanning four agroclimatic regions during July–August 2023. High-throughput amplicon sequencing targeting the bacterial 16S rRNA V3–V4 region and fungal ITS1–ITS2 loci revealed pronounced geographic heterogeneity in community composition and alpha diversity. Pseudomonas spp. were ubiquitous, with a peak relative abundance of 32.5% in Dekemhare. Dominant fungi included Alternaria spp. (14.3% in Berik), Fusarium spp. (highest diversity 53.8% in Adi Kuala), Botrytis cinerea (36.9% in Adi Keih), and Rhizoctonia solani (44.4% in Adi Tekeliezan). Bacterial Shannon diversity averaged 5.67; fungal, 4.70. Weighted UniFrac PCoA accounted for 56.5% of bacterial community variance along PC1, confirming distinct geographic clustering. Potential pathogen-associated taxa of Pseudomonas, Alternaria, Fusarium, and Colletotrichum were detected in every asymptomatic sample examined, demonstrating the inadequacy of visual-only disease surveillance. These findings establish the first molecular baseline for potato-associated taxon diversity in Eritrea, providing the empirical foundation for region-specific integrated disease management and evidence-based seed certification protocols. Full article

Botrytis cinerea, the causal agent of gray mold disease, is a major phytopathogen responsible for substantial losses in horticultural crops. In this study, cultivation conditions for Bacillus velezensis R22 were optimized to maximize overall antifungal activity against B. cinerea. A Plackett–Burman design was used to identify medium components affecting antifungal activity in flask cultures, followed by response surface methodology based on a central composite design (CCD) to optimize sucrose concentration, temperature, and agitation speed in a stirred bioreactor. Maximum antifungal activity was obtained at 17.45 g/L initial sucrose, 31.8 °C, and 293 rpm. The biological relevance of the optimized culture was confirmed in a tomato infection model, in which gray mold severity was reduced by 85.3% relative to the untreated control and by 59.9% relative to the non-optimized R22 culture. The same CCD approach was subsequently applied to determine cultivation conditions that maximize the concentration of R22 viable cells. The optimal parameters for 24-h growth (35.46 g/L sucrose, 36.5 °C, and 454 rpm) differed markedly from those identified for maximal antifungal activity. When evaluated on uninfected tomato plants, cultures produced under conditions favoring higher cell density showed enhanced plant growth-promoting activity compared to the non-optimized culture. Mass spectrometric analysis of lipopeptide extracts revealed that the enhanced antifungal activity was accompanied by an increased abundance of long-chain homologs across all major lipopeptide families, particularly surfactins. Thus, our results indicate that maximizing overall antifungal activity may be of greater practical significance than optimization of the individual fungicidal agent. Full article

The increasing demand for sustainable crop protection strategies has intensified interest in plant-beneficial bacteria as alternatives to synthetic agrochemicals. In this study, the soil-derived bacterium Pseudomonas putida V01 was isolated and characterized for its antifungal and plant growth-promoting potential through an integrated approach combining biological assays, untargeted metabolomics, and in vivo plant experiments. Cell-free culture filtrates exhibited strong antifungal activity against major phytopathogenic fungi, completely inhibiting the growth of Sclerotium rolfsii and significantly reducing mycelial development of Alternaria alternata and Fusarium proliferatum by 40% and 20%, respectively. Volatile organic compounds (VOCs) selectively inhibited Botrytis cinerea and A. alternata by 28% and 10%, respectively, and affected sporulation of F. proliferatum. Metabolomic profiling through LC-qTOF-MS and GC-MS analyses revealed a chemically diverse metabolome, including putatively annotated diketopiperazines, cyclic peptides, phenolic compounds, and fatty acids. VOC profiling indicated ketones and alcohols as the predominant volatile classes, with 2-undecanone and 2-undecanol among the most abundant compounds detected. In vivo assays on wheat seedlings showed significant increases in shoot growth, biomass accumulation, and chlorophyll content compared with untreated controls. These findings indicate that P. putida V01 combines complementary antifungal and plant growth-promoting activities associated with a diverse repertoire of diffusible and volatile metabolites. The integrated biological and metabolomic characterization highlights its potential as a multifunctional microbial inoculant for sustainable crop production and disease management. Full article

Bio-based coatings enriched with essential oils (EOs) represent a promising alternative to synthetic preservatives to extend strawberries’ shelf-life. This study evaluated the effects of chitosan (CHT) formulations containing three selected EOs (Illicium verum, Citrus sinensis, and Citrus limon) on the volatile profile, sensory quality, and antifungal activity of strawberry fruits. Volatile emissions were characterized by Headspace Solid Phase Micro-Extraction/Gas Chromatography-Mass Spectrometry, while sensory properties were assessed using Quantitative Descriptive Analysis. Antifungal activity was evaluated both in vitro and in vivo against Botrytis cinerea. Chitosan alone slightly modified the volatile profile, while EO-enriched coatings induced marked and concentration-dependent changes, reflecting the chemical composition of the incorporated EOs. Among the tested formulations, CHT combined with 1% C. sinensis EO provided the best balance between preservation of the characteristic strawberry aroma and overall sensory acceptance. In vitro assays showed that EO volatiles, particularly from C. sinensis and I. verum, significantly inhibited fungal growth, while diffusible compounds were less effective. In vivo, EO-containing coatings reduced disease incidence and severity by approximately 50%. These findings highlight the potential of CHT–EO coatings as sustainable options for postharvest preservation, although optimization of EO type and concentration is crucial to balance sensory quality and antimicrobial efficacy. Full article

Botrytis cinerea is a major phytopathogenic fungus responsible for substantial economic losses in horticultural crops, underscoring the need for sustainable alternatives to synthetic fungicides. This study investigated the influence of physical, chemical and biological culture parameters on the antifungal activity of culture filtrates produced by Trichoderma harzianum BOL-12QD. Culture conditions were sequentially optimised by evaluating light-filter exposure, carbon and nitrogen source composition, potato ecotype selection, co-cultivation with Botrytis cinerea, and volatile-mediated interactions. Antifungal activity was assessed using mycelial growth inhibition assays against Botrytis cinerea. Among the individual factors, violet-filter illumination, a medium containing 5 g L⁻¹ glucose and 250 g L⁻¹ potato extract, the Leke Pek’e potato ecotype, ammonium nitrate as nitrogen source, and co-cultivation with Botrytis cinerea at 10⁴ conidia mL⁻¹ produced the highest inhibitory effects. Sequential integration of these optimised conditions resulted in enhanced antifungal activity, reaching up to 62% inhibition. Volatile organic compounds produced by Trichoderma harzianum BOL-12QD exhibited only minimal antifungal activity under the conditions tested, suggesting that volatile-mediated antagonism plays a limited role in this system. In contrast, culture-dependent modulation of extracellular metabolite profiles was evidenced by comparative ¹H NMR fingerprinting, which revealed condition-specific spectral differences, with the optimised treatment displaying a distinct metabolic signature relative to all other conditions. Cytotoxicity assays in murine peritoneal macrophages showed no significant reduction in cell viability at concentrations up to 200 μg mL⁻¹. In vivo exposure to the optimised culture filtrate (250 mg kg⁻¹ d⁻¹ for 10 days) induced transient treatment-related clinical observations without mortality, indicating a need for further detailed toxicological characterisation. Overall, these findings demonstrate that the antifungal activity of Trichoderma harzianum BOL-12QD is strongly modulated by interacting environmental, nutritional and biological culture parameters. The results support the potential of optimised culture filtrates as a source of bioactive metabolites for biocontrol applications, while highlighting the importance of integrated biochemical and toxicological evaluation. Full article

Non-indigenous or alien macroalgae are increasingly recognized as ecological threats, sources of raw material, and reservoirs of bioactive compounds for industry and agriculture. This review analyses the valorization potential of this biomass, focusing on their antifungal and elicitor activities against phytopathogenic fungi, particularly Mediterranean (De Bary) Whetzel, 1945. The literature published since 2020 was retrieved from Scopus using targeted keyword combinations. Three major topics were examined: (i) invasive and beach-cast macroalgal and their ecological context, (ii) antifungal and elicitor properties of macroalgal extracts, and (iii) the use of deep eutectic solvents (DES) for the green extraction of bioactive compounds. Species such as Asparagopsis armata, Rugulopteryx okamurae, and Sargassum muticum have shown promising antifungal and elicitor effects, frequently associated with phenolic compounds and polysaccharides. Extracts from these algae can inhibit the growth of fungi or activate plant defense pathways, providing environmentally friendly alternatives to synthetic pesticides. Moreover, DES and natural DES (NADES) offer tunable, biodegradable solvents capable of efficiently extracting these bioactive molecules while reducing the environmental impact associated with conventional organic solvents. Overall, the valorization of this biomass represents a sustainable strategy that simultaneously mitigates ecological and economic impacts and contributes to the development of sustainable inputs in agriculture. Full article