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Authors = Sheng-Yong Yang

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15 pages, 1917 KiB  
Article
Home Range and Habitat Selection of Blue-Eared Pheasants Crossoptilon auritum During Breeding Season in Mountains of Southwest China
by Jinglin Peng, Xiaotong Shang, Fan Fan, Yong Zheng, Lianjun Zhao, Sheng Li, Yang Liu and Li Zhang
Animals 2025, 15(14), 2015; https://doi.org/10.3390/ani15142015 - 8 Jul 2025
Viewed by 307
Abstract
The blue-eared pheasant (Crossoptilon auritum), a Near Threatened (NT) species endemic to China, is primarily distributed across the northeastern region of the Qinghai–Tibetan Plateau. To bridge the fine-scale spatiotemporal gap in blue-eared pheasant behavioral ecology, this study combines satellite telemetry, movement [...] Read more.
The blue-eared pheasant (Crossoptilon auritum), a Near Threatened (NT) species endemic to China, is primarily distributed across the northeastern region of the Qinghai–Tibetan Plateau. To bridge the fine-scale spatiotemporal gap in blue-eared pheasant behavioral ecology, this study combines satellite telemetry, movement modeling, and field-based habitat assessments (vegetation, topography, human disturbance). This multidisciplinary approach reveals detailed patterns of their behavior throughout the breeding season. Using satellite-tracking data from six individuals (five males tracked at 4 h intervals; one female tracked hourly) in Wanglang National Nature Reserve (WLNNR), Sichuan Province during breeding seasons 2018–2019, we quantified their home ranges via Kernel Density Estimation (KDE) and examined the female movement patterns using a Hidden Markov Model (HMM). The results indicated male core (50% KDE: 21.93 ± 16.54 ha) and total (95% KDE: 158.30 ± 109.30 ha) home ranges, with spatial overlap among individuals but no significant temporal variation in home range size. Habitat selection analysis indicated that the blue-eared pheasants favored shrub-dominated areas at higher elevations (steep southeast-facing slopes), regions distant from human disturbance, and with abundant animal trails. We found that their movement patterns differed between sexes: the males exhibited higher daytime activity yet slower movement speeds, while the female remained predominantly near nests, making brief excursions before returning promptly. These results enhance our understanding of the movement ecology of blue-eared pheasants by revealing fine-scale breeding-season behaviors and habitat preferences through satellite-tracking. Such detailed insights provide an essential foundation for developing targeted conservation strategies, particularly regarding effective habitat management and zoning of human activities within the species’ range. Full article
(This article belongs to the Section Birds)
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18 pages, 13961 KiB  
Article
Dibromo-Edaravone Induces Anti-Erythroleukemia Effects via the JAK2-STAT3 Signaling Pathway
by Qiqing Chen, Sheng Liu, Xuenai Wei, Peng Zhao, Fen Tian, Kang Yang, Jingrui Song, Yubing Huang, Min Wen, Jialei Song, Yong Jian and Yanmei Li
Int. J. Mol. Sci. 2025, 26(9), 4000; https://doi.org/10.3390/ijms26094000 - 23 Apr 2025
Viewed by 681
Abstract
Acute erythroid leukemia (AEL) is a rare and aggressive hematological malignancy managed with chemotherapy, targeted therapies, and stem cell transplantation. However, these treatments often suffer from limitations such as refractoriness, high toxicity, recurrence, and drug resistance, underscoring the urgent need for novel therapeutic [...] Read more.
Acute erythroid leukemia (AEL) is a rare and aggressive hematological malignancy managed with chemotherapy, targeted therapies, and stem cell transplantation. However, these treatments often suffer from limitations such as refractoriness, high toxicity, recurrence, and drug resistance, underscoring the urgent need for novel therapeutic approaches. Dibromo-edaravone (D-EDA) is a synthetic derivative of edaravone (EDA) with unreported anti-leukemic properties. In this study, D-EDA demonstrated potent cytotoxicity against HEL cells with an IC50 value of 8.17 ± 0.43 μM using an MTT assay. Morphological analysis via inverted microscopy revealed reductions in cell number and signs of cellular crumpling and fragmentation. Flow cytometry analysis, Hoechst 33258 staining, Giemsa staining, a JC-1 assay, and a reactive oxygen species (ROS) assay showed that D-EDA induced apoptosis in HEL cells. Furthermore, D-EDA induced S-phase cell cycle arrest. Western blot analysis showed significant upregulation of key apoptosis-related proteins, including cleaved caspase-9, cleaved caspase-3, and cleaved poly ADP-ribose polymerase (PARP), alongside a reduction in Bcl-2 expression. Additionally, oncogenic markers such as c-Myc, CyclinA2, and CDK2 were downregulated, while the cell cycle inhibitor p21 was upregulated. Mechanistic studies involving molecular docking, a cellular thermal shift assay (CETSA), the caspase inhibitor Z-VAD-FMK, JAK2 inhibitor Ruxolitinib, and STAT3 inhibitor Stattic revealed that D-EDA activates the caspase cascade and inhibits the JAK2-STAT3 signaling pathway in HEL cells. In vivo, D-EDA improved spleen structure, increased the hemolysis ratio, and extended survival in a mouse model of acute erythroleukemia. In conclusion, D-EDA induces apoptosis via the caspase cascade and JAK2-STAT3 signaling pathway, demonstrating significant anti-leukemia effects in vitro and in vivo. Thus, D-EDA may be developed as a potential therapeutic agent for acute erythroleukemia. Full article
(This article belongs to the Section Biochemistry)
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14 pages, 3947 KiB  
Article
The Deubiquitinase OTUD1 Influences HIV-1 Release by Regulating the Host Restriction Factor BST-2
by Man-Di Zhang, Fan Chen, Wen-Qiang He, Ying Lu, Feng-Liang Liu, Hong-Guang Zhang, Liu-Meng Yang, Chun-Sheng Dong, Si-Dong Xiong and Yong-Tang Zheng
Viruses 2025, 17(2), 260; https://doi.org/10.3390/v17020260 - 14 Feb 2025
Cited by 1 | Viewed by 968
Abstract
Bone marrow stromal cell antigen 2 (BST-2) is a restriction factor for human immunodeficiency virus type I (HIV-1) and plays an important role in regulating the release of viral particles. However, the antiviral efficacy of BST-2 is antagonized by the HIV-1-encoded accessory protein [...] Read more.
Bone marrow stromal cell antigen 2 (BST-2) is a restriction factor for human immunodeficiency virus type I (HIV-1) and plays an important role in regulating the release of viral particles. However, the antiviral efficacy of BST-2 is antagonized by the HIV-1-encoded accessory protein Vpu, which facilitates the degradation of BST-2 by recruiting E3 ubiquitin ligase β-TrCP. The involvement of deubiquitinases (DUBs) in counteracting BST-2 ubiquitination and influencing its stability during HIV-1 infection remains inadequately explored. In this study, we conducted a small interfering RNA (siRNA) screening of human DUBs and determined that OTUD1 interacts with BST-2, leading to a reduction in its K48- and K63-linked ubiquitination. This reduction increases BST-2 protein stability, and subsequently inhibits HIV-1 release. Our findings reveal a novel regulatory mechanism by which DUBs influence the stability of the HIV-1 restriction factor BST-2 to dampen viral release, providing a potential therapeutic target for HIV-1 antiviral intervention. Full article
(This article belongs to the Special Issue Cellular Mechanisms Regulating HIV Replication)
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21 pages, 8572 KiB  
Article
The Measurement of Metal Mineral Particle Size Under the Microscope Based on Gaussian Pyramids and Directional Maximum Intercept
by Chaoxi Luo, Feng Xie, Bo Li, Xiangwen Lv, Meiguang Jiang, Jing Zhang, Sheng Jian, Fang Yang and Yong Wang
Minerals 2024, 14(12), 1284; https://doi.org/10.3390/min14121284 - 17 Dec 2024
Viewed by 915
Abstract
With the development of mineral resources, minerals are becoming increasingly difficult to process. In order to utilize these resources more effectively, in-depth research into process mineralogy has become increasingly important in the field of mineralogy, and particle size measurement under the microscope is [...] Read more.
With the development of mineral resources, minerals are becoming increasingly difficult to process. In order to utilize these resources more effectively, in-depth research into process mineralogy has become increasingly important in the field of mineralogy, and particle size measurement under the microscope is one of the critical aspects of process mineralogy. At present, the use of scanning electron microscopes and other equipment for measurement is very expensive, and manual measurement has problems such as poor accuracy and low efficiency. In addition, there is a lack of reference materials for the segmentation algorithm of mineral light images. This article proposes a Gaussian pyramid based on bilateral filtering combined with directional maximum intercept to measure mineral particle size under the microscope. In the experiments, different segmentation algorithms were studied, including Gaussian pyramid segmentation based on bilateral filtering, segmentation based on Fuzzy C-Means, and the rapidly developing deep learning segmentation algorithms in recent years. By comparing the segmentation effects of these three algorithms on various mineral thin-section images, the Gaussian pyramid segmentation algorithm based on bilateral filtering was selected as the optimal one. This was then combined with the directional maximum intercept method to measure the particle size of ilmenite and pyrite images. The experimental results show that the segmentation method based on the bilateral filtering Gaussian pyramid technique has higher segmentation accuracy than the other two algorithms, and can accurately measure the particle size of minerals under the microscope. Compared with manual measurement, this method can effectively and accurately measure the microscopic particle size of target minerals, greatly reducing the workload of measurement personnel and reducing the time spent on measurement. Full article
(This article belongs to the Section Mineral Processing and Extractive Metallurgy)
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14 pages, 7337 KiB  
Article
The Effects of Laser Power on the Performance and Microstructure of Inconel 718 Formed by Selective Laser Melting
by Yalong Wang, Lei Gao, Liyuan Yang, Tao Liu, Jianyin Miao, Yong Zang and Sheng Zhang
Appl. Sci. 2024, 14(21), 9686; https://doi.org/10.3390/app14219686 - 23 Oct 2024
Cited by 1 | Viewed by 1543
Abstract
In this study, the effects of laser power on the microstructure and mechanical properties of Inconel 718 formed by SLM were systematically studied. The results show that with the increase in laser power from 285 W to 360 W, the increase in working [...] Read more.
In this study, the effects of laser power on the microstructure and mechanical properties of Inconel 718 formed by SLM were systematically studied. The results show that with the increase in laser power from 285 W to 360 W, the increase in working temperature in the molten pool promoted the evaporation of gas and the vaporization of the low-melting-point alloy components, and the relative density gradually increased from 99.31% to 99.79%. In addition, with the increase in laser energy density, the microstructure gradually coarsened from columnar dendrites to cellular crystals. The nano-hardness of the material decreased with the increase in laser power. The nano-hardness of four groups of samples from 285 W to 360 W decreased form 3.43 GPa to 2.09 GPa, and the elastic modulus decreased form 205.72 GPa to 199.91 GPa. Full article
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18 pages, 4701 KiB  
Article
Identification of Shaker Potassium Channel Family Members and Functional Characterization of SsKAT1.1 in Stenotaphrum secundatum Suggest That SsKAT1.1 Contributes to Cold Resistance
by Dong-Li Hao, Jia Qu, Zhi-Yong Wang, Dao-Jin Sun, Sheng-Nan Yang, Jian-Xiu Liu, Jun-Qin Zong and Hai-Long Lu
Int. J. Mol. Sci. 2024, 25(17), 9480; https://doi.org/10.3390/ijms25179480 - 31 Aug 2024
Cited by 2 | Viewed by 1350
Abstract
Stenotaphrum secundatum is an excellent shade-tolerant warm-season turfgrass. Its poor cold resistance severely limits its promotion and application in temperate regions. Mining cold resistance genes is highly important for the cultivation of cold-resistant Stenotaphrum secundatum. Although there have been many reports on [...] Read more.
Stenotaphrum secundatum is an excellent shade-tolerant warm-season turfgrass. Its poor cold resistance severely limits its promotion and application in temperate regions. Mining cold resistance genes is highly important for the cultivation of cold-resistant Stenotaphrum secundatum. Although there have been many reports on the role of the Shaker potassium channel family under abiotic stress, such as drought and salt stress, there is still a lack of research on their role in cold resistance. In this study, the transcriptome database of Stenotaphrum secundatum was aligned with the whole genome of Setaria italica, and eight members of the Shaker potassium channel family in Stenotaphrum secundatum were identified and named SsKAT1.1, SsKAT1.2, SsKAT2.1, SsKAT2.2, SsAKT1.1, SsAKT2.1, SsAKT2.2, and SsKOR1. The KAT3-like gene, KOR2 homologous gene, and part of the AKT-type weakly inwardly rectifying channel have not been identified in the Stenotaphrum secundatum transcriptome database. A bioinformatics analysis revealed that the potassium channels of Stenotaphrum secundatum are highly conserved in terms of protein structure but have more homologous members in the same group than those of other species. Among the three species of Oryza sativa, Arabidopsis thaliana, and Setaria italica, the potassium channel of Stenotaphrum secundatum is more closely related to the potassium channel of Setaria italica, which is consistent with the taxonomic results of these species belonging to Paniceae. Subcellular location experiments demonstrate that SsKAT1.1 is a plasma membrane protein. The expression of SsKAT1.1 reversed the growth defect of the potassium absorption-deficient yeast strain R5421 under a low potassium supply, indicating that SsKAT1.1 is a functional potassium channel. The transformation of SsKAT1.1 into the cold-sensitive yeast strain INVSC1 increased the cold resistance of the yeast, indicating that SsKAT1.1 confers cold resistance. The transformation of SsKAT1.1 into the salt-sensitive yeast strain G19 increased the resistance of yeast to salt, indicating that SsKAT1.1 is involved in salt tolerance. These results suggest that the manipulation of SsKAT1.1 will improve the cold and salt stress resistance of Stenotaphrum secundatum. Full article
(This article belongs to the Special Issue Advance in Plant Abiotic Stress)
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15 pages, 3959 KiB  
Article
Sub-Bin Delayed High-Range Accuracy Photon-Counting 3D Imaging
by Hao-Meng Yin, Hui Zhao, Ming-Yang Yang, Yong-An Liu, Li-Zhi Sheng and Xue-Wu Fan
Photonics 2024, 11(2), 181; https://doi.org/10.3390/photonics11020181 - 16 Feb 2024
Viewed by 1553
Abstract
The range accuracy of single-photon-array three-dimensional (3D) imaging systems is limited by the time resolution of the array detectors. We introduce a method for achieving super-resolution in 3D imaging through sub-bin delayed scanning acquisition and fusion. Its central concept involves the generation of [...] Read more.
The range accuracy of single-photon-array three-dimensional (3D) imaging systems is limited by the time resolution of the array detectors. We introduce a method for achieving super-resolution in 3D imaging through sub-bin delayed scanning acquisition and fusion. Its central concept involves the generation of multiple sub-bin difference histograms through sub-bin shifting. Then, these coarse time-resolution histograms are fused with multiplied averages to produce finely time-resolved detailed histograms. Finally, the arrival times of the reflected photons with sub-bin resolution are extracted from the resulting fused high-time-resolution count distribution. Compared with the sub-delayed with the fusion method added, the proposed method performs better in reducing the broadening error caused by coarsened discrete sampling and background noise error. The effectiveness of the proposed method is examined at different target distances, pulse widths, and sub-bin scales. The simulation analytical results indicate that small-scale sub-bin delays contribute to superior reconstruction outcomes for the proposed method. Specifically, implementing a sub-bin temporal resolution delay of a factor of 0.1 for a 100 ps echo pulse width substantially reduces the system ranging error by three orders of magnitude. Furthermore, Monte Carlo simulations allow to describe a low signal-to-background noise ratio (0.05) characterised by sparsely reflected photons. The proposed method demonstrates a commendable capability to simultaneously achieve wide-ranging super-resolution and denoising. This is evidenced by the detailed depth distribution information and substantial reduction of 95.60% in the mean absolute error of the reconstruction results, confirming the effectiveness of the proposed method in noisy scenarios. Full article
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14 pages, 8158 KiB  
Article
Characterization of Four Complete Mitogenomes of Monolepta Species and Their Related Phylogenetic Implications
by Rong-Rong Gao, Qi-Long Lei, Xu Jin, Iqbal Zafar, Xing-Ke Yang, Cheng-Yong Su, Jia-Sheng Hao and Rui-E Nie
Insects 2024, 15(1), 50; https://doi.org/10.3390/insects15010050 - 11 Jan 2024
Cited by 3 | Viewed by 2203
Abstract
Monolepta is one of the diverse genera in the subfamily Galerucinae, including 708 species and 6 sub-species worldwide. To explore the information on the mitogenome characteristics and phylogeny of the section “Monoleptites”, especially the genus Monolepta, we obtained the newly completed mitochondrial [...] Read more.
Monolepta is one of the diverse genera in the subfamily Galerucinae, including 708 species and 6 sub-species worldwide. To explore the information on the mitogenome characteristics and phylogeny of the section “Monoleptites”, especially the genus Monolepta, we obtained the newly completed mitochondrial genomes (mitogenomes) of four Monolepta species using high-throughput sequencing technology. The lengths of these four new mitochondrial genomes are 16,672 bp, 16,965 bp, 16,012 bp, and 15,866 bp in size, respectively. All four mitochondrial genomes include 22 transfer RNA genes (tRNAs), 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNAs), and one control region, which is consistent with other Coleoptera. The results of the nonsynonymous with synonymous substitution rates showed that ND6 had the highest evolution rate, while COI displayed the lowest evolution rate. The substitution saturation of three datasets (13 PCGs_codon1, 13 PCGs_codon2, 13 PCGs_codon3) showed that there was no saturation across all datasets. Phylogenetic analyses based on three datasets (ND1, 15 genes of mitogenomes, and 13 PCGs_AA) were carried out using maximum likelihood (ML) and Bayesian inference (BI) methods. The results showed that mitogenomes had a greater capacity to resolve the main clades than the ND1 gene at the suprageneric and species levels. The section “Monoleptites” was proven to be a monophyletic group, while Monolepta was a non-monophyletic group. Based on ND1 data, the newly sequenced species whose antennal segment 2 was shorter than 3 were split into several clades, while, based on the mitogenomic dataset, the four newly sequenced species had close relationships with Paleosepharia. The species whose antennal segment 2 was as long as 3 were split into two clades, which indicated that the characteristic of “antennal segment 2 as long as 3” of the true “Monolepta” evolved multiple times in several subgroups. Therefore, to explore the relationships among the true Monolepta, the most important thing is to perform a thorough revision of Monolepta and related genera in the future. Full article
(This article belongs to the Section Insect Systematics, Phylogeny and Evolution)
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25 pages, 6870 KiB  
Article
Low-CO2 Optimization Design of Quaternary Binder Containing Calcined Clay, Slag, and Limestone
by Run-Sheng Lin, Yongpang Liao, Yi Han, Seokhoon Oh, Ki-Bong Park, Hyun-Min Yang, Xiao-Yong Wang, Bo Yang and Li-Yi Meng
Materials 2023, 16(19), 6385; https://doi.org/10.3390/ma16196385 - 24 Sep 2023
Cited by 6 | Viewed by 1579
Abstract
Blended cement is commonly used for producing sustainable concretes. This paper presents an experimental study and an optimization design of a low-CO2 quaternary binder containing calcined clay, slag, and limestone using the response surface method. First, a Box–Behnken design with three influencing [...] Read more.
Blended cement is commonly used for producing sustainable concretes. This paper presents an experimental study and an optimization design of a low-CO2 quaternary binder containing calcined clay, slag, and limestone using the response surface method. First, a Box–Behnken design with three influencing factors and three levels was used for the combination design of the quaternary composite cement. The lower limit of the mineral admixtures was 0%. The upper limits of slag, calcined clay, and limestone powder were 30%, 20%, and 10%, respectively. The water-to-binder ratio (water/binder) was 0.5. Experimental works to examine workability and strength (at 3 and 28 days) were performed for the composite cement. The CO2 emissions were calculated considering binder compositions. A second-order polynomial regression was used to evaluate the experimental results. In addition, a low-CO2 optimization design was conducted for the composite cement using a composite desirability function. The objectives of the optimization design were the target 28-day strength (30, 35, 40, and 45 MPa), target workability (160 mm flow), and low CO2 emissions. The trends of the properties of optimal combinations were consistent with those in the test results. In summary, the proposed optimization design can be used for designing composite cement considering strength, workability, and ecological aspects. Full article
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12 pages, 1332 KiB  
Article
Six New Phenolic Glycosides from the Seeds of Moringa oleifera Lam. and Their α-Glucosidase Inhibitory Activity
by Lin-Zhen Li, Liang Chen, Yang-Li Tu, Xiang-Jie Dai, Sheng-Jia Xiao, Jing-Shan Shi, Yong-Jun Li and Xiao-Sheng Yang
Molecules 2023, 28(17), 6426; https://doi.org/10.3390/molecules28176426 - 4 Sep 2023
Cited by 5 | Viewed by 1979
Abstract
Plant-derived phytochemicals have recently drawn interest in the prevention and treatment of diabetes mellitus (DM). The seeds of Moringa oleifera Lam. are widely used in food and herbal medicine for their health-promoting properties against various diseases, including DM, but many of their effective [...] Read more.
Plant-derived phytochemicals have recently drawn interest in the prevention and treatment of diabetes mellitus (DM). The seeds of Moringa oleifera Lam. are widely used in food and herbal medicine for their health-promoting properties against various diseases, including DM, but many of their effective constituents are still unknown. In this study, 6 new phenolic glycosides, moringaside B–G (16), together with 10 known phenolic glycosides (716) were isolated from M. oleifera seeds. The structures were elucidated by 1D and 2D NMR spectroscopy and high-resolution electrospray ionization mass spectrometry (HR-ESI-MS) data analysis. The absolute configurations of compounds 2 and 3 were determined by electronic circular dichroism (ECD) calculations. Compounds 2 and 3 especially are combined with a 1,3-dioxocyclopentane moiety at the rhamnose group, which are rarely reported in phenolic glycoside backbones. A biosynthetic pathway of 2 and 3 was assumed. Moreover, all the isolated compounds were evaluated for their inhibitory activities against α-glucosidase. Compounds 4 and 16 exhibited marked activities with IC50 values of 382.8 ± 1.42 and 301.4 ± 6.22 μM, and the acarbose was the positive control with an IC50 value of 324.1 ± 4.99 μM. Compound 16 revealed better activity than acarbose. Full article
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22 pages, 16489 KiB  
Article
Shading-Dependent Greening Process of the Leaves in the Light-Sensitive Albino Tea Plant ‘Huangjinya’: Possible Involvement of the Light-Harvesting Complex II Subunit of Photosystem II in the Phenotypic Characteristic
by Ying-Qi Wang, Jing-Jing Ye, Hong-Zhiyuan Yang, Da Li, Xiao-Xiang Li, Yong-Kang Wang, Xin-Qiang Zheng, Jian-Hui Ye, Qing-Sheng Li, Yue-Rong Liang and Jian-Liang Lu
Int. J. Mol. Sci. 2023, 24(12), 10314; https://doi.org/10.3390/ijms241210314 - 18 Jun 2023
Cited by 7 | Viewed by 2881
Abstract
The light-sensitive albino tea plant can produce pale-yellow shoots with high levels of amino acids which are suitable to process high-quality tea. In order to understand the mechanism of the albino phenotype formation, the changes in the physio-chemical characteristics, chloroplast ultrastructure, chlorophyll-binding proteins, [...] Read more.
The light-sensitive albino tea plant can produce pale-yellow shoots with high levels of amino acids which are suitable to process high-quality tea. In order to understand the mechanism of the albino phenotype formation, the changes in the physio-chemical characteristics, chloroplast ultrastructure, chlorophyll-binding proteins, and the relevant gene expression were comprehensively investigated in the leaves of the light-sensitive albino cultivar ‘Huangjinya’ (‘HJY’) during short-term shading treatment. In the content of photosynthetic pigments, the ultrastructure of the chloroplast, and parameters of the photosynthesis in the leaves of ‘HJY’ could be gradually normalized along with the extension of the shading time, resulting in the leaf color transformed from pale yellow to green. BN-PAGE and SDS-PAGE revealed that function restoration of the photosynthetic apparatus was attributed to the proper formation of the pigment-protein complexes on the thylakoid membrane that benefited from the increased levels of the LHCII subunits in the shaded leaves of ‘HJY’, indicating the low level of LHCII subunits, especially the lack of the Lhcb1 might be responsible for the albino phenotype of the ‘HJY’ under natural light condition. The deficiency of the Lhcb1 was mainly subject to the strongly suppressed expression of the Lhcb1.x which might be modulated by the chloroplast retrograde signaling pathway GUN1 (GENOMES UNCOUPLED 1)-PTM (PHD type transcription factor with transmembrane domains)-ABI4 (ABSCISIC ACID INSENSITIVE 4). Full article
(This article belongs to the Special Issue Advances in Tea Tree Genetics and Breeding)
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10 pages, 1034 KiB  
Article
Molecular Epidemiological Investigation of Cyclospora spp. in Holstein Cattle in Partial Areas of the Yunnan Province, China
by Jian-Fa Yang, Zhao-Jun Heng, Fan-Fan Shu, Hua-Ming Mao, Yong-Sheng Su, Jun-Jun He and Feng-Cai Zou
Animals 2023, 13(9), 1527; https://doi.org/10.3390/ani13091527 - 3 May 2023
Cited by 6 | Viewed by 1875
Abstract
Cyclospora spp. is a food-borne intestinal protozoan, which is widely distributed in the world and poses the risk of zoonosis. In order to reveal the prevalence of Cyclospora spp. in Holstein cattle in partial areas of the Yunnan Province, 524 fresh fecal samples [...] Read more.
Cyclospora spp. is a food-borne intestinal protozoan, which is widely distributed in the world and poses the risk of zoonosis. In order to reveal the prevalence of Cyclospora spp. in Holstein cattle in partial areas of the Yunnan Province, 524 fresh fecal samples of Holstein cattle were collected from Dali, Kunming, Chuxiong, and Qujing in Yunnan Province. A nested PCR amplification of the small subunit (SSU) rRNA gene of Cyclospora spp. was carried out, and the products of the nested PCR were further analyzed by restriction fragment length polymorphism (RFLP) using Bsp E Ⅰ. The results of the present study showed that 13 samples were positive for Cyclospora spp., and the total infection rate of Cyclospora sp. was 2.48%. The infection of Cyclospora spp. was detected in Dali, Qujing, and Chuxiong. Chuxiong showed the highest infection rate (5.71%), and infection rate in Dali and Qujing was 2.19% and 3.16%, respectively. Interestingly, the infection of Cyclospora spp. was not detected in Kunming. The infection of Cyclospora spp. showed no significant differences among different regions (p > 0.05). Cyclospora sp. infection was detected in all ages and sexes, but the differences were not significant (p > 0.05). Sequencing and phylogenetic analysis showed that five Cyclospora spp. samples were closely related to the Cyclospora spp. of humans, and the others were closely related to the Cyclospora spp. of bovines. The results of the present study suggested that there was an infection of Cyclospora spp. in Holstein cattle in the Yunnan Province, and the Cyclospora spp. showed a risk of zoonosis. Thus, the prevention and control of Cyclospora spp. should be strengthened in the Yunnan Province, China. The results of this investigation provide data references for the further research of Cyclosporiasis in Holstein cattle in the Yunnan Province. Full article
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25 pages, 14972 KiB  
Article
Detection and Classification of Cotton Foreign Fibers Based on Polarization Imaging and Improved YOLOv5
by Rui Wang, Zhi-Feng Zhang, Ben Yang, Hai-Qi Xi, Yu-Sheng Zhai, Rui-Liang Zhang, Li-Jie Geng, Zhi-Yong Chen and Kun Yang
Sensors 2023, 23(9), 4415; https://doi.org/10.3390/s23094415 - 30 Apr 2023
Cited by 19 | Viewed by 3203
Abstract
It is important to detect and classify foreign fibers in cotton, especially white and transparent foreign fibers, to produce subsequent yarn and textile quality. There are some problems in the actual cotton foreign fiber removing process, such as some foreign fibers missing inspection, [...] Read more.
It is important to detect and classify foreign fibers in cotton, especially white and transparent foreign fibers, to produce subsequent yarn and textile quality. There are some problems in the actual cotton foreign fiber removing process, such as some foreign fibers missing inspection, low recognition accuracy of small foreign fibers, and low detection speed. A polarization imaging device of cotton foreign fiber was constructed based on the difference in optical properties and polarization characteristics between cotton fibers. An object detection and classification algorithm based on an improved YOLOv5 was proposed to achieve small foreign fiber recognition and classification. The methods were as follows: (1) The lightweight network Shufflenetv2 with the Hard-Swish activation function was used as the backbone feature extraction network to improve the detection speed and reduce the model volume. (2) The PANet network connection of YOLOv5 was modified to obtain a fine-grained feature map to improve the detection accuracy for small targets. (3) A CA attention module was added to the YOLOv5 network to increase the weight of the useful features while suppressing the weight of invalid features to improve the detection accuracy of foreign fiber targets. Moreover, we conducted ablation experiments on the improved strategy. The model volume, mAP@0.5, mAP@0.5:0.95, and FPS of the improved YOLOv5 were up to 0.75 MB, 96.9%, 59.9%, and 385 f/s, respectively, compared to YOLOv5, and the improved YOLOv5 increased by 1.03%, 7.13%, and 126.47%, respectively, which proves that the method can be applied to the vision system of an actual production line for cotton foreign fiber detection. Full article
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15 pages, 2785 KiB  
Article
New Guaiane-Type Sesquiterpenoids Biscogniauxiaols A–G with Anti-Fungal and Anti-Inflammatory Activities from the Endophytic Fungus Biscogniauxia Petrensis
by Long Han, Wen Zheng, Sheng-Yan Qian, Ming-Fei Yang, Yong-Zhong Lu, Zhang-Jiang He and Ji-Chuan Kang
J. Fungi 2023, 9(4), 393; https://doi.org/10.3390/jof9040393 - 23 Mar 2023
Cited by 5 | Viewed by 2774
Abstract
Seven undescribed guaiane-type sesquiterpenoids named biscogniauxiaols A–G (17) were isolated from the endophytic fungus Biscogniauxia petrensis on Dendrobium orchids. Their structures were determined by extensive spectroscopic analyses, electronic circular dichroism (EC) and specific rotation (SR) calculations. Compound 1 represented [...] Read more.
Seven undescribed guaiane-type sesquiterpenoids named biscogniauxiaols A–G (17) were isolated from the endophytic fungus Biscogniauxia petrensis on Dendrobium orchids. Their structures were determined by extensive spectroscopic analyses, electronic circular dichroism (EC) and specific rotation (SR) calculations. Compound 1 represented a new family of guaiane-type sesquiterpenoids featuring an unprecedented [5/6/6/7] tetracyclic system. A plausible biosynthetic pathway for compounds 17 was proposed. The anti-fungal, anti-inflammatory and multidrug resistance reversal activities of the isolates were evaluated. Compounds 1, 2 and 7 exhibited potent inhibitory activities against Candida albicans with MIC values ranging from 1.60 to 6.30 μM, and suppressed nitric oxide (NO) production with IC50 ranging from 4.60 to 20.00 μM. Additionally, all compounds (100 μg/mL) enhanced the cytotoxicity of cisplatin in cisplatin-resistant non-small cell lung cancer cells (A549/DDP). This study opened up a new source for obtaining bioactive guaiane-type sesquiterpenoids and compounds 1, 2, and 7 were promising for further optimization as multifunctional inhibitors for anti-fungal (C. albicans) and anti-inflammatory purposes. Full article
(This article belongs to the Special Issue Diversity and Secondary Metabolites of Endophytic Fungi)
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16 pages, 6723 KiB  
Article
Construction of Osteosarcoma Diagnosis Model by Random Forest and Artificial Neural Network
by Sheng Li, Yukang Que, Rui Yang, Peng He, Shenglin Xu and Yong Hu
J. Pers. Med. 2023, 13(3), 447; https://doi.org/10.3390/jpm13030447 - 28 Feb 2023
Cited by 11 | Viewed by 2477
Abstract
Osteosarcoma accounts for 28% of primary bone malignancies in adults and up to 56% in children and adolescents (<20 years). However, early diagnosis and treatment are still inadequate, and new improvements are still needed. Missed diagnoses exist due to fewer traditional diagnostic methods, [...] Read more.
Osteosarcoma accounts for 28% of primary bone malignancies in adults and up to 56% in children and adolescents (<20 years). However, early diagnosis and treatment are still inadequate, and new improvements are still needed. Missed diagnoses exist due to fewer traditional diagnostic methods, and clinical symptoms are often already present before diagnosis. This study aimed to develop novel and efficient predictive models for the diagnosis of osteosarcoma and to identify potential targets for exploring osteosarcoma markers. First, osteosarcoma and normal tissue expression microarray datasets were downloaded from the Gene Expression Omnibus (GEO). Then we screened the differentially expressed genes (DEGs) in the osteosarcoma and normal groups in the training group. Next, in order to explore the biologically relevant role of DEGs, Metascape and enrichment analyses were also performed on DEGs. The “randomForest” and “neuralnet” packages in R software were used to select representative genes and construct diagnostic models for osteosarcoma. The next step is to validate the model of the artificial neural network. Then, we performed an immune infiltration analysis by using the training set data. Finally, we constructed a prognostic model using representative genes for prognostic analysis. The copy number of osteosarcoma was also analyzed. A random forest classifier identified nine representative genes (ANK1, TGFBR3, TNFRSF21, HSPB8, ITGA7, RHD, AASS, GREM2, NFASC). HSPB8, RHD, AASS, and NFASC were genes we identified that have not been previously reported to be associated with osteosarcoma. The osteosarcoma diagnostic model we constructed has good performance with areas under the curves (AUCs) of 1 and 0.987 in the training and validation groups, respectively. This study opens new horizons for the early diagnosis of osteosarcoma and provides representative markers for the future treatment of osteosarcoma. This is the first study to pioneer the establishment of a genetic diagnosis model for osteosarcoma and advance the development of osteosarcoma diagnosis and treatment. Full article
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