Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Article Types

Countries / Regions

Search Results (1,132)

Search Parameters:
Authors = Hung-Yu Lin ORCID = 0000-0002-9035-5408

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
28 pages, 2379 KiB  
Article
FADEL: Ensemble Learning Enhanced by Feature Augmentation and Discretization
by Chuan-Sheng Hung, Chun-Hung Richard Lin, Shi-Huang Chen, You-Cheng Zheng, Cheng-Han Yu, Cheng-Wei Hung, Ting-Hsin Huang and Jui-Hsiu Tsai
Bioengineering 2025, 12(8), 827; https://doi.org/10.3390/bioengineering12080827 - 30 Jul 2025
Viewed by 275
Abstract
In recent years, data augmentation techniques have become the predominant approach for addressing highly imbalanced classification problems in machine learning. Algorithms such as the Synthetic Minority Over-sampling Technique (SMOTE) and Conditional Tabular Generative Adversarial Network (CTGAN) have proven effective in synthesizing minority class [...] Read more.
In recent years, data augmentation techniques have become the predominant approach for addressing highly imbalanced classification problems in machine learning. Algorithms such as the Synthetic Minority Over-sampling Technique (SMOTE) and Conditional Tabular Generative Adversarial Network (CTGAN) have proven effective in synthesizing minority class samples. However, these methods often introduce distributional bias and noise, potentially leading to model overfitting, reduced predictive performance, increased computational costs, and elevated cybersecurity risks. To overcome these limitations, we propose a novel architecture, FADEL, which integrates feature-type awareness with a supervised discretization strategy. FADEL introduces a unique feature augmentation ensemble framework that preserves the original data distribution by concurrently processing continuous and discretized features. It dynamically routes these feature sets to their most compatible base models, thereby improving minority class recognition without the need for data-level balancing or augmentation techniques. Experimental results demonstrate that FADEL, solely leveraging feature augmentation without any data augmentation, achieves a recall of 90.8% and a G-mean of 94.5% on the internal test set from Kaohsiung Chang Gung Memorial Hospital in Taiwan. On the external validation set from Kaohsiung Medical University Chung-Ho Memorial Hospital, it maintains a recall of 91.9% and a G-mean of 86.7%. These results outperform conventional ensemble methods trained on CTGAN-balanced datasets, confirming the superior stability, computational efficiency, and cross-institutional generalizability of the FADEL architecture. Altogether, FADEL uses feature augmentation to offer a robust and practical solution to extreme class imbalance, outperforming mainstream data augmentation-based approaches. Full article
Show Figures

Graphical abstract

11 pages, 421 KiB  
Article
Serum p-Cresyl Sulfate Is Independently Associated with Aortic Stiffness in Non-Dialysis Chronic Kidney Disease Patients
by Yahn-Bor Chern, Ken Lee Chia, Chin-Hung Liu, Yu-Li Lin, Jen-Pi Tsai and Bang-Gee Hsu
Life 2025, 15(7), 1116; https://doi.org/10.3390/life15071116 - 16 Jul 2025
Viewed by 244
Abstract
p-Cresyl sulfate (PCS), a gut-derived uremic toxin with proinflammatory and cytotoxic effects, has been implicated in cardiovascular injuries among patients with chronic kidney disease (CKD). Aortic stiffness (AS), assessed by carotid–femoral pulse wave velocity (cfPWV), is a recognized predictor of cardiovascular risk. [...] Read more.
p-Cresyl sulfate (PCS), a gut-derived uremic toxin with proinflammatory and cytotoxic effects, has been implicated in cardiovascular injuries among patients with chronic kidney disease (CKD). Aortic stiffness (AS), assessed by carotid–femoral pulse wave velocity (cfPWV), is a recognized predictor of cardiovascular risk. This study investigated the association between serum PCS levels and AS in patients with nondialysis-dependent CKD. In total, 165 patients with nondialysis-dependent CKD were enrolled. Clinical data and fasting blood samples were collected. Arterial stiffness (AS) was assessed bilaterally by measuring carotid–femoral pulse wave velocity (cfPWV) on both the left and right sides. A value above 10 m/s was considered indicative of increased stiffness. Serum PCS levels were quantified using high-performance liquid chromatography–mass spectrometry. Fifty patients (30.3%) had AS. The AS group was significantly older and had higher diabetes prevalence, systolic blood pressure, fasting glucose, urinary protein-creatinine ratio, and PCS levels than the control group. In the multivariate analysis, both PCS (odds ratio [OR]: 1.097; 95% confidence interval [CI]: 1.024–1.175; p = 0.008) and age (OR: 1.057; 95% CI: 1.025–1.090; p < 0.001) were independently associated with AS. In conclusion, elevated serum PCS and older age were independently associated with AS. Thus, PCS is a potential early marker of vascular damage in CKD. Full article
(This article belongs to the Special Issue Advances in Vascular Health and Metabolism)
Show Figures

Figure 1

16 pages, 3493 KiB  
Article
Molecular Mechanisms of Aminoglycoside-Induced Ototoxicity in Murine Auditory Cells: Implications for Otoprotective Drug Development
by Cheng-Yu Hsieh, Jia-Ni Lin, Yi-Fan Chou, Chuan-Jen Hsu, Peir-Rong Chen, Yu-Hsuan Wen, Chen-Chi Wu and Chuan-Hung Sun
Int. J. Mol. Sci. 2025, 26(14), 6720; https://doi.org/10.3390/ijms26146720 - 13 Jul 2025
Viewed by 347
Abstract
Aminoglycoside antibiotics are critical in clinical use for treating severe infections, but they can occasionally cause irreversible sensorineural hearing loss. To establish a rational pathway for otoprotectant discovery, we provide an integrated, three-tier methodology—comprising cell-model selection, transcriptomic analysis, and a gentamicin–Texas Red (GTTR) [...] Read more.
Aminoglycoside antibiotics are critical in clinical use for treating severe infections, but they can occasionally cause irreversible sensorineural hearing loss. To establish a rational pathway for otoprotectant discovery, we provide an integrated, three-tier methodology—comprising cell-model selection, transcriptomic analysis, and a gentamicin–Texas Red (GTTR) uptake assay—to guide the development of otoprotective strategies. We first utilized two murine auditory cell lines—UB/OC-2 and HEI-OC1. We focused on TMC1 and OCT2 and further explored the underlying mechanisms of ototoxicity. UB/OC-2 exhibited a higher sensitivity to gentamicin, which correlated with elevated OCT2 expression confirmed via RT-PCR and Western blot. Transcriptomic analysis revealed upregulation of PI3K-Akt, calcium, and GPCR-related stress pathways in gentamicin-treated HEI-OC1 cells. Protein-level analysis further confirmed that gentamicin suppressed phosphorylated Akt while upregulating ER stress markers (GRP78, CHOP) and apoptotic proteins (cleaved caspase 3, PARP). Co-treatment with PI3K inhibitors (LY294002, wortmannin) further suppressed Akt phosphorylation, supporting the role of PI3K-Akt signaling in auditory cells. To visualize drug entry, we used GTTR to evaluate its applicability as a fluorescence-based uptake assay in these cell lines, which were previously employed mainly in cochlear explants. Sodium thiosulfate (STS) and N-acetylcysteine (NAC) significantly decreased GTTR uptake, suggesting a protective effect against gentamicin-induced hair cell damage. In conclusion, our findings showed a complex ototoxic cascade involving OCT2- and TMC1-mediated drug uptake, calcium imbalance, ER stress, and disruption of PI3K-Akt survival signaling. We believe that UB/OC-2 cells serve as a practical in vitro model for mechanistic investigations and screening of otoprotective compounds. Additionally, GTTR may be a simple, effective method for evaluating protective interventions in auditory cell lines. Overall, this study provides molecular-level insights into aminoglycoside-induced ototoxicity and introduces a platform for protective strategies. Full article
(This article belongs to the Special Issue Hearing Loss: Molecular Biological Insights)
Show Figures

Figure 1

22 pages, 9057 KiB  
Article
A Multi-Stage Framework for Kawasaki Disease Prediction Using Clustering-Based Undersampling and Synthetic Data Augmentation: Cross-Institutional Validation with Dual-Center Clinical Data in Taiwan
by Heng-Chih Huang, Chuan-Sheng Hung, Chun-Hung Richard Lin, Yi-Zhen Shie, Cheng-Han Yu and Ting-Hsin Huang
Bioengineering 2025, 12(7), 742; https://doi.org/10.3390/bioengineering12070742 - 7 Jul 2025
Viewed by 470
Abstract
Kawasaki disease (KD) is a rare yet potentially life-threatening pediatric vasculitis that, if left undiagnosed or untreated, can result in serious cardiovascular complications. Its heterogeneous clinical presentation poses diagnostic challenges, often failing to meet classical criteria and increasing the risk of oversight. Leveraging [...] Read more.
Kawasaki disease (KD) is a rare yet potentially life-threatening pediatric vasculitis that, if left undiagnosed or untreated, can result in serious cardiovascular complications. Its heterogeneous clinical presentation poses diagnostic challenges, often failing to meet classical criteria and increasing the risk of oversight. Leveraging routine laboratory tests with AI offers a promising strategy for enhancing early detection. However, due to the extremely low prevalence of KD, conventional models often struggle with severe class imbalance, limiting their ability to achieve both high sensitivity and specificity in practice. To address this issue, we propose a multi-stage AI-based predictive framework that incorporates clustering-based undersampling, data augmentation, and stacking ensemble learning. The model was trained and internally tested on clinical blood and urine test data from Chang Gung Memorial Hospital (CGMH, n = 74,641; 2010–2019), and externally validated using an independent dataset from Kaohsiung Medical University Hospital (KMUH, n = 1582; 2012–2020), thereby supporting cross-institutional generalizability. At a fixed recall rate of 95%, the model achieved a specificity of 97.5% and an F1-score of 53.6% on the CGMH test set, and a specificity of 74.7% with an F1-score of 23.4% on the KMUH validation set. These results underscore the model’s ability to maintain high specificity even under sensitivity-focused constraints, while still delivering clinically meaningful predictive performance. This balance of sensitivity and specificity highlights the framework’s practical utility for real-world KD screening. Full article
Show Figures

Figure 1

17 pages, 2255 KiB  
Article
Predicting Fetal Growth with Curve Fitting and Machine Learning
by Huan Zhang, Chuan-Sheng Hung, Chun-Hung Richard Lin, Hong-Ren Yu, You-Cheng Zheng, Cheng-Han Yu, Chih-Min Tsai and Ting-Hsin Huang
Bioengineering 2025, 12(7), 730; https://doi.org/10.3390/bioengineering12070730 - 3 Jul 2025
Viewed by 457
Abstract
Monitoring fetal growth throughout pregnancy is essential for early detection of developmental abnormalities. This study developed a Taiwan-specific fetal growth reference using a web-based data collection platform and polynomial regression modeling. We analyzed ultrasound data from 980 pregnant women, encompassing 8350 prenatal scans, [...] Read more.
Monitoring fetal growth throughout pregnancy is essential for early detection of developmental abnormalities. This study developed a Taiwan-specific fetal growth reference using a web-based data collection platform and polynomial regression modeling. We analyzed ultrasound data from 980 pregnant women, encompassing 8350 prenatal scans, to model six key fetal biometric parameters: abdominal circumference, crown–rump length, estimated fetal weight, head circumference, biparietal diameter, and femur length. Quadratic regression was selected based on a balance of performance and simplicity, with R2 values exceeding 0.95 for most parameters. Confidence intervals and real-time anomaly detection were implemented through the platform. The results demonstrate the potential for efficient, population-specific fetal growth monitoring in clinical settings. Full article
Show Figures

Figure 1

7 pages, 589 KiB  
Proceeding Paper
Dynamic Program Analysis and Visualized Learning System in University Programming Courses
by Pei-Wen Lin, Shu-Han Yu and Chien-Hung Lai
Eng. Proc. 2025, 98(1), 30; https://doi.org/10.3390/engproc2025098030 - 2 Jul 2025
Viewed by 271
Abstract
To correspond to the advancement of technology, programming has become an indispensable course in university curricula. However, students easily become confused by the rules governing program execution or by complex logical structures. Mastering program structure and logic often is a significant challenge for [...] Read more.
To correspond to the advancement of technology, programming has become an indispensable course in university curricula. However, students easily become confused by the rules governing program execution or by complex logical structures. Mastering program structure and logic often is a significant challenge for beginners, especially. Despite the availability of information on programming on various websites and tools, including generative artificial intelligence (AI), there is still a gap between conceptual understanding and practical application for beginners. They overlook important implementation details or struggle to grasp the flow of a program, making the mastery of program logic a persistent challenge. To address these issues, we have developed a system that dynamically generates process architecture diagrams. Users upload their code, and the system produces corresponding diagrams that decompose and execute the code line by line. Its visual representation allows users to observe the program’s execution and aids them in comprehending the sequence and operational flow of the code. By understanding the structure and logic of the program intuitively, this system supplements traditional teaching methods and AI-assisted question-and-answer tools. The experimental results demonstrated that students found the system helpful to track their learning progress (87%) and improved their understanding of program code (81%). Additionally, 84% of students reported that the system was easy to use, highlighting its user-friendliness. In terms of student interest, 83% of students agreed that the interactive elements made learning more engaging, indicating that the system positively contributed to dynamic and enjoyable learning. However, 63% of students reported an improvement in coding and were influenced by the complexity of the programming tasks assigned. Despite this, the overall satisfaction with the system developed in this study was high. Full article
Show Figures

Figure 1

22 pages, 9021 KiB  
Article
Population Cohort-Validated PM2.5-Induced Gene Signatures: A Machine Learning Approach to Individual Exposure Prediction
by Yu-Chung Wei, Wen-Chi Cheng, Pinpin Lin, Zhi-Yao Zhang, Chi-Hsien Chen, Chih-Da Wu, Yue Leon Guo and Hung-Jung Wang
Toxics 2025, 13(7), 562; https://doi.org/10.3390/toxics13070562 - 30 Jun 2025
Viewed by 419
Abstract
Transcriptomic profiling has shown that exposure to PM2.5, a common air pollutant, can modulate gene expression, which has been linked to negative health effects and diseases. However, there are few population-based cohort studies on the association between PM2.5 exposure and [...] Read more.
Transcriptomic profiling has shown that exposure to PM2.5, a common air pollutant, can modulate gene expression, which has been linked to negative health effects and diseases. However, there are few population-based cohort studies on the association between PM2.5 exposure and specific gene set expression. In this study, we used an unbiased transcriptomic profiling approach to examine gene expression in a mouse model exposed to PM2.5 and to identify PM2.5-responsive genes. The gene expressions were further validated in both the human cell lines and a population-based cohort study. Two cohorts of healthy older adults (aged ≥ 65 years) were recruited from regions characterized by differing levels of PM2.5. Logistic regression and decision tree algorithms were then utilized to construct predictive models for PM2.5 exposure based on these gene expression profiles. Our results indicated that the expression of five genes (FAM102B, PPP2R1B, OXR1, ITGAM, and PRP38B) increased with PM2.5 exposure in both cell-based assay and population-based cohort studies. Furthermore, the predictive models demonstrated high accuracy in classifying high-and-low PM2.5 exposure, potentially supporting the integration of gene biomarkers into public health practices. Full article
(This article belongs to the Section Air Pollution and Health)
Show Figures

Graphical abstract

17 pages, 1930 KiB  
Article
Sofalcone Suppresses Dengue Virus Replication by Activating Heme Oxygenase-1-Mediated Antiviral Interferon Responses
by Yu-Lun Ou, Wei-Chun Chen, Chia-Hung Yen, Wangta Liu, Chun-Kuang Lin, Shun-Chieh Yu, Mei-Yueh Lee and Jin-Ching Lee
Int. J. Mol. Sci. 2025, 26(13), 5921; https://doi.org/10.3390/ijms26135921 - 20 Jun 2025
Viewed by 406
Abstract
Dengue virus (DENV) infection is strongly associated with dengue hemorrhagic fever and dengue shock syndrome, both of which carry mortality risks. Addressing the urgent need for effective dengue therapeutics, we identified sofalcone, a gastroprotective agent with antioxidant and anti-inflammatory properties, as a potential [...] Read more.
Dengue virus (DENV) infection is strongly associated with dengue hemorrhagic fever and dengue shock syndrome, both of which carry mortality risks. Addressing the urgent need for effective dengue therapeutics, we identified sofalcone, a gastroprotective agent with antioxidant and anti-inflammatory properties, as a potential inhibitor of DENV replication. Sofalcone demonstrated efficacy against all four DENV serotypes, with the dose inhibiting 50% (IC50) value of 28.1 ± 0.42 μM against viral replication of DENV serotype 2, without significant cytotoxicity. Additionally, sofalcone significantly improved survival rates and reduced viral titers in DENV-infected ICR-suckling mice. Mechanistically, sofalcone induced heme oxygenase-1 (HO-1) expression via the nuclear factor-erythroid 2-reated factor 2 (Nrf2) pathway, which in turn suppressed viral protease activity and restored antiviral interferon (IFN) responses. This included dose-dependent stimulation of IFN downstream antiviral genes such as 2′-5′-oligoadenylate synthetase 1 (OAS1), OAS2, and OAS3. Given its established clinical use as an anti-gastric ulcer drug, sofalcone offers promising potential for rapid application in treating DENV infection. Full article
Show Figures

Figure 1

23 pages, 6061 KiB  
Article
Monitoring and Prediction of the Real-Time Transient Thermal Mechanical Behaviors of a Motorized Spindle Tool
by Tria Mariz Arief, Wei-Zhu Lin, Jui-Pin Hung, Muhamad Aditya Royandi and Yu-Jhang Chen
Lubricants 2025, 13(6), 269; https://doi.org/10.3390/lubricants13060269 - 16 Jun 2025
Viewed by 484
Abstract
The spindle is a critical component that significantly influences the performance of machine tools. In motorized spindles, heat generation from both the bearings and built-in motor leads to thermal deformation of structural components, which, in turn, affects machining accuracy. This study investigates the [...] Read more.
The spindle is a critical component that significantly influences the performance of machine tools. In motorized spindles, heat generation from both the bearings and built-in motor leads to thermal deformation of structural components, which, in turn, affects machining accuracy. This study investigates the thermo-mechanical behavior of motorized spindles under various operational conditions, with the aim of accurately predicting thermally induced axial deformation and determining optimal temperature sensor placement. To achieve this, temperature rise and deformation data were simultaneously collected using appropriate data acquisition systems across varying spindle speeds. A correlation analysis confirmed a strong positive relationship exceeding 97.5% between temperature rise at all sensor locations and axial thermal deformation. Multivariate regression analysis was then applied to identify optimal combinations of sensor data for accurate deformation prediction. Additionally, a finite element (FE) thermal–mechanical model was developed to simulate spindle behavior, with the results validated against experimental measurements and regression model predictions. The four-variable regression model and FE simulation achieved Root Mean Square Errors (RMSEs) of 0.84 µm and 0.82 µm, respectively, both demonstrating close agreement with experimental data and effectively capturing the trend of thermal deformation over time under different operating conditions. Finally, an optimal sensor configuration was identified that minimizes pre-diction error while reducing the number of required sensors. Overall, the proposed methodology offers valuable insights for optimizing spindle design to enhance thermal–mechanical performance. Full article
(This article belongs to the Special Issue High Performance Machining and Surface Tribology)
Show Figures

Figure 1

14 pages, 322 KiB  
Article
Serum Indoxyl Sulfate as a Potential Biomarker of Peripheral Arterial Stiffness in Patients with Non-Dialysis Chronic Kidney Disease Stages 3 to 5
by Yahn-Bor Chern, Jen-Pi Tsai, Chin-Hung Liu, Yu-Li Lin, Chih-Hsien Wang and Bang-Gee Hsu
Toxins 2025, 17(6), 283; https://doi.org/10.3390/toxins17060283 - 5 Jun 2025
Viewed by 676
Abstract
Indoxyl sulfate (IS), which is a protein-bound uremic toxin, is involved in vascular dysfunction and cardiovascular risk in subjects with chronic kidney disease (CKD). However, its role in peripheral arterial stiffness (PAS) remains unclear. This cross-sectional study evaluated the relationship between IS and [...] Read more.
Indoxyl sulfate (IS), which is a protein-bound uremic toxin, is involved in vascular dysfunction and cardiovascular risk in subjects with chronic kidney disease (CKD). However, its role in peripheral arterial stiffness (PAS) remains unclear. This cross-sectional study evaluated the relationship between IS and PAS in patients diagnosed with CKD stages 3 through 5 who are not undergoing dialysis. Patients with CKD from a single center were enrolled. High-performance liquid chromatography analyzed the serum IS levels. PAS was evaluated using brachial–ankle pulse wave velocity (baPWV). IS was independently associated with PAS (odds ratio [OR]: 1.389 for 1 μg/mL increase in IS, 95% confidence interval [CI]: 1.086–1.775, p = 0.009) in a multivariable analysis after adjustment for age, hypertension, diabetes mellitus, blood pressure, lipid profiles, renal function, albumin, and proteinuria. Moreover, the mean baPWV (p = 0.010), left baPWV (p = 0.009), and right baPWV (p = 0.015) levels significantly correlated with the log-transformed IS (log-IS) levels. The area under the receiver operating characteristic curve for serum IS as a predictor of PAS was determined to be 0.667 (95% CI: 0.580−0.754; p = 0.0002). IS was associated with PAS in non-dialysis CKD stages 3–5, suggesting that IS may be a possible vascular risk marker. Future studies should address the nature of the relationship between IS and vascular dysfunction and assess therapeutic strategies to reduce IS. Full article
(This article belongs to the Special Issue The Role of Uremic Toxins in Comorbidities of Chronic Kidney Disease)
Show Figures

Figure 1

13 pages, 462 KiB  
Article
Clinical Characteristics of Patients with Intra-Abdominal Infection Caused by Stenotrophomonas maltophilia
by Chien-Liang Chen, Chun-Chou Tsai, Wei-Ping Chen, Feng-Yee Chang, Ching-Mei Yu, Hung-Sheng Shang, Leung-Kei Siu, Ya-Sung Yang, Jung-Chung Lin and Ching-Hsun Wang
J. Clin. Med. 2025, 14(11), 3974; https://doi.org/10.3390/jcm14113974 - 4 Jun 2025
Viewed by 598
Abstract
Background: Intra-abdominal infections (IAIs) caused by Stenotrophomonas maltophilia have rarely been reported. This study aimed to describe the clinical characteristics and risk factors for mortality among patients with S. maltophilia IAIs. Methods: A retrospective study was conducted on inpatients with IAIs caused by [...] Read more.
Background: Intra-abdominal infections (IAIs) caused by Stenotrophomonas maltophilia have rarely been reported. This study aimed to describe the clinical characteristics and risk factors for mortality among patients with S. maltophilia IAIs. Methods: A retrospective study was conducted on inpatients with IAIs caused by S. maltophilia at Tri Service General Hospital from 2004 to 2017. Clinical and microbiologic data of the included cases were reviewed via medical charts and microbiology databases. Multivariable logistic regression analyses were performed to identify risk factors for in-hospital death. Results: In total, 110 patients were diagnosed with S. maltophilia IAIs. Malignancy (56.3%) and liver cirrhosis (35.3%) were the most commonly identified underlying diseases. The major causes of S. maltophilia IAIs were biliary tract infection (42.7%), recent abdominal surgery (35.4%), and spontaneous bacterial peritonitis (20.0%). Polymicrobial infections were observed in 84 (76.4%) patients. In addition to S. maltophilia, co-cultured bacteria (n = 140) included Enterobacterales, representing 19.3% (27/140) of the total isolates, and non-fermentative aerobes, comprising 29.3% (41/140). In addition, anaerobic bacteria and fungi accounted for 9.2% (13/140) and 10% (14/140), respectively. The overall mortality rate was 40.9%. Multivariable logistic regression analysis revealed that high Sequential Organ Failure Assessment scores and malignancies were independent risk factors for mortality, while the immediate administration of appropriate antibiotics targeting S. maltophilia was a protective factor (p < 0.05). Conclusions: Patients with an underlying malignancy or liver cirrhosis were at risk for IAIs caused by S. maltophilia. The prompt initiation of effective antibiotics against S. maltophilia is critical for achieving favorable outcomes. Full article
(This article belongs to the Section Infectious Diseases)
Show Figures

Figure 1

19 pages, 2874 KiB  
Article
Natural Spawning, Early Development, and First Successful Hatchery Production of the Vermiculated Angelfish (Chaetodontoplus mesoleucus), Exploring the Influence of Temperature and Salinity
by Yu-Hsuan Sun, Yu-Ru Lin, Hung-Yen Hsieh and Pei-Jie Meng
Animals 2025, 15(11), 1657; https://doi.org/10.3390/ani15111657 - 4 Jun 2025
Viewed by 425
Abstract
The marine ornamental species trade relies heavily on wild-caught specimens, including the Vermiculated angelfish (Chaetodontoplus mesoleucus). Captive breeding of this species faces challenges with limited detailed knowledge available beyond 2 days post-hatch (dph) regarding the influence of environmental factors. This study [...] Read more.
The marine ornamental species trade relies heavily on wild-caught specimens, including the Vermiculated angelfish (Chaetodontoplus mesoleucus). Captive breeding of this species faces challenges with limited detailed knowledge available beyond 2 days post-hatch (dph) regarding the influence of environmental factors. This study provides a detailed characterization of C. mesoleucus from early development to 381 dph. Under controlled laboratory conditions, the effect of temperature (22–37 °C) on hatching rate, deformity rate, hatching period duration, time to 50% hatch, and survival rate is investigated. Additionally, the influence of different salinities (0–38 psu) on hatching rates and larval deformity rates was also examined. The optimal incubation temperatures for high hatching rate and minimal larval deformities are found to be within 25–28 °C. A lower salinity threshold of 10 psu was established for successful hatching, and the optimal salinity range for minimizing larval deformities was 33–36 psu. These findings provide crucial baseline data and practical recommendations for optimizing hatchery protocols for C. mesoleucus, contributing to enhanced larval survival and the potential for sustainable aquaculture production, thereby reducing the pressure on wild populations. Full article
Show Figures

Figure 1

19 pages, 3372 KiB  
Article
iDNS3IP: Identification and Characterization of HCV NS3 Protease Inhibitory Peptides
by Hui-Ju Kao, Tzu-Hsiang Weng, Chia-Hung Chen, Chen-Lin Yu, Yu-Chi Chen, Chen-Chen Huang, Kai-Yao Huang and Shun-Long Weng
Int. J. Mol. Sci. 2025, 26(11), 5356; https://doi.org/10.3390/ijms26115356 - 3 Jun 2025
Viewed by 598
Abstract
Hepatitis C virus (HCV) infection remains a significant global health burden, driven by the emergence of drug-resistant strains and the limited efficacy of current antiviral therapies. A promising strategy for therapeutic intervention involves targeting the NS3 protease, a viral enzyme essential for replication. [...] Read more.
Hepatitis C virus (HCV) infection remains a significant global health burden, driven by the emergence of drug-resistant strains and the limited efficacy of current antiviral therapies. A promising strategy for therapeutic intervention involves targeting the NS3 protease, a viral enzyme essential for replication. In this study, we present the first computational model specifically designed to identify NS3 protease inhibitory peptides (NS3IPs). Using amino acid composition (AAC) and K-spaced amino acid pair composition (CKSAAP) features, we developed machine learning classifiers based on support vector machine (SVM) and random forest (RF), achieving accuracies of 98.85% and 97.83%, respectively, validated through 5-fold cross-validation and independent testing. To support the accessibility of the strategy, we implemented a web-based tool, iDNS3IP, which enables real-time prediction of NS3IPs. In addition, we performed feature space analyses using PCA, t-SNE, and LDA based on AAindex descriptors. The resulting visualizations showed a distinguishable clustering between NS3IPs and non-inhibitory peptides, suggesting that inhibitory activity may correlate with characteristic physicochemical patterns. This study provides a reliable and interpretable platform to assist in the discovery of therapeutic peptides and supports continued research into peptide-based antiviral strategies for drug-resistant HCV. To enhance its flexibility, the iDNS3IP web tool also incorporates a BLAST-based similarity search function, enabling users to evaluate inhibitory candidates from both predictive and homology-based perspectives. Full article
(This article belongs to the Section Molecular Informatics)
Show Figures

Figure 1

12 pages, 266 KiB  
Article
Associations Between Sleep Quality and Self-Reported Health Status in Middle-Aged and Older Adults: A Community-Based, Cross-Sectional Study in Northern Taiwan
by Wen-Hsueh Chen, Chao-Tung Chen, Kai-Hung Cheng, Yu-Chung Tsao, Yu-Hsiang Lin and Jau-Yuan Chen
Healthcare 2025, 13(11), 1272; https://doi.org/10.3390/healthcare13111272 - 28 May 2025
Viewed by 692
Abstract
Background/Objectives: Poor sleep quality is a prevalent health concern among older adults, impacting cognitive and physical functions. This study aimed to determine the association between sleep quality and self-reported health status among middle-aged and older adults in northern Taiwan. Methods: This [...] Read more.
Background/Objectives: Poor sleep quality is a prevalent health concern among older adults, impacting cognitive and physical functions. This study aimed to determine the association between sleep quality and self-reported health status among middle-aged and older adults in northern Taiwan. Methods: This cross-sectional study, conducted from April to October 2017, assessed participants using the Chinese version of the Pittsburgh Sleep Quality Index (CPSQI) with a cut-off of 5; scores above 5 indicated poor sleep quality. The self-reported health status was evaluated using a questionnaire. Statistical analyses included the chi-squared test, one-way ANOVA, Cochran–Armitage trend test, and multiple logistic regression models. Results: This study included 850 adults (243 males and 607 females). The participants were grouped according to their self-reported health status as follows: good (n = 278), fair (n = 499), and poor (n = 73). Poor health status was associated with worse sleep quality components, including sleep latency, efficiency, disturbances, medication use, and daytime dysfunction (p for trend < 0.001). The multiple logistic regression analysis showed higher dissatisfaction with health status among the participants with a CPSQI score of >5 (odds ratio, 4.12; 95% CI 2.26–7.50; p < 0.001). A poor health status was reported by 19.51% of the participants sleeping < 5 h, compared to 6.97% of the participants sleeping 5–6 h, 6.60% of the participants sleeping 6–7 h, and 6.34% of the participants sleeping > 7 h, showing a trend toward a shorter sleep duration (p for trend = 0.002). Conclusions: Our study findings indicate that a poor sleep quality and short sleep duration were independent risk factors for poor self-reported health status in middle-aged and older adults in Taiwan. Addressing sleep quality is crucial for implementing preventive health measures in this demographic group. Full article
Show Figures

Figure 1

13 pages, 2180 KiB  
Article
Wide Field-of-View Air-to-Water Rolling Shutter-Based Optical Camera Communication (OCC) Using CUDA Deep-Neural-Network Long-Short-Term-Memory (CuDNNLSTM)
by Yung-Jie Chen, Yu-Han Lin, Guo-Liang Shih, Chi-Wai Chow and Chien-Hung Yeh
Appl. Sci. 2025, 15(11), 5971; https://doi.org/10.3390/app15115971 - 26 May 2025
Viewed by 430
Abstract
Nowadays, underwater activities are becoming more and more important. As the number of underwater sensing devices grows rapidly, the amount of bandwidth needed also increases very quickly. Apart from underwater communication, direct communication across the water–air interface is also highly desirable. Air-to-water wireless [...] Read more.
Nowadays, underwater activities are becoming more and more important. As the number of underwater sensing devices grows rapidly, the amount of bandwidth needed also increases very quickly. Apart from underwater communication, direct communication across the water–air interface is also highly desirable. Air-to-water wireless transmission is crucial for sending control information or instructions from unmanned aerial vehicles (UAVs) or ground stations above the sea surface to autonomous underwater vehicles (AUVs). On the other hand, water-to-air wireless transmission is also required to transmit real-time information from AUVs or underwater sensor nodes to UAVs above the water surface. Previously, we successfully demonstrated a water-to-air optical camera-based OWC system, which is also known as optical camera communication (OCC). However, the reverse transmission (i.e., air-to-water) using OCC has not been analyzed. It is worth noting that in the water-to-air OCC system, since the camera is located in the air, the image of the light source is magnified due to diffraction. Hence, the pixel-per-symbol (PPS) decoding of the OCC pattern is easier. In the proposed air-to-water OCC system reported here, since the camera is located in the water, the image of the light source in the air will be diminished in size due to diffraction. Hence, the PPS decoding of the OCC pattern becomes more difficult. In this work, we propose and experimentally demonstrate a wide field-of-view (FOV) air-to-water OCC system using CUDA Deep-Neural-Network Long-Short-Term-Memory (CuDNNLSTM). Due to water turbulence and air turbulence affecting the AUV and UAV, a precise line-of-sight (LOS) between the AUV and the UAV is difficult to achieve. OCC can provide wide FOV without the need for precise optical alignment. Results revealed that the proposed air-to-water OCC system can support a transmission rate of 7.2 kbit/s through a still water surface, and 6.6 kbit/s through a wavy water surface; this satisfies the hard-decision forward error correction (HD-FEC) bit-error-rate (BER). Full article
(This article belongs to the Special Issue Screen-Based Visible Light Communication)
Show Figures

Figure 1

Back to TopTop